Rmu_sc0000376.1_g000035

Domain of unknown function (DUF4283)

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000376.1
Physical Location & Seq
Forward (+)
148018 .. 150894
2877 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000376.1_g000035.1.cds

Sequence Viewer

Length: 1851 bp
atgctggctttagaggaatttgatggtttgactgaggtttatcgggctccgatcacgggaatttcggtgtgggtgaaaatctttggcttaccgccggctttgttcactgacgaggttgtacagatgattggttttactcttggcaaggttctagggttcgataagccggcgatccggcgtggcacagcggcgctctgcttcaggtgcaagaaaatgtttgattttttcaaggtttatggacttctggagcatctggctgctggctatgttaggtcgccaaaggtggagattggtgataaaaaccctaaccctaatctgggttttgggggttatatggtggctgttgatcgcgtaggttcaaccaatggtgggcagagggctgcacagttgtcaagactggtggctagggcttctgctcctaatctatttatggcgacactaaaatcgatcagcttcatagtgccaggagtttttgcgcaaatgctggctcaacagttgaatatgttcctgcctaagccagtggagatgactgcccctccaccaatgatggaggtgatgaatgtagaggtgccctggattacaggtgttaagagaatagtgtcaatgatgttggtaccttactgcaagcgcactaagagcatcgatgtagcggtacccgtgcctgtggagttggattttgagccggtgttgtcttttccggttgagaatgatgtgttgaaggtgtctttggctaagaaggctagagttggacgtcccttgggcagcaagattagcctaaaagggacaggaaaccctagcgtccaattccggcatctgtgtcggcgacttctgcaaccacacccaccaatcttctaccccatctcgctgcctatcatggccaatatcgattccattacttcgcttgccattgcaaccaatgatgttgtttacatctctaccatgactgagggttgtggacagcgtacttcccaatcctatctcttggcacgatccctcaccacgaagccaacgacggcgatggatctgaagcaccacttcaggcgtgtttgggttttgagtcaaggctttaatgttcagcagaggacactagataggtttatattctcttttgatctcaggagtgattgccgaaaggtgttgatgggtggaccatggagttttaatcgaactctcgtggtattgcagccctatgatggtatcgccccactgcgatcggtgcatatgcttgatctgttcttctgggttcgtataactgatatgcctccagcgtttgaacagaggaacaccattgccaatgtgactacgatggcgggaaagtgtctggacattgatggaaagctctttgatgccacaagggagattagggttcttgaggtgcactttctgtatgagaatatggtgggcatgtgtgataactgtgcttgtgtctttcatgagaaaggcccatgtagccctaacatgataccatctgccgtgaaatccatggaacaacaggttgctcgtaagctagatctcactcatcagtttcttggagtacacggccatcagtttacggaaggaacttttcggtttcagggcatcaccacgcctattttgccaccggtgggtaggtcattgtttgggggtccggagtccagcaagccaaggaggccggtgatcatcaaaaatgcaaatgtgaaggaacctactgatgggaactcccttgctcttgtttcagttgaggcatatggcccagctaagtgggaccaatcttttccctccccacaaaaattacatttcttgatgtctgacttgcttgaaggaagatcaagtccagttgcttctgcaaaaaaggttaggattgatgcttga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

616

Amino Acids

68.39

Weight (kDa)

9.45

Isoelectric Point (pI)

41.46

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000032)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g20531 FvH4_1g22101 FvH4_1g26161 FvH4_2g06802 FvH4_2g07851 FvH4_2g07920 FvH4_2g11481 FvH4_2g14491 FvH4_2g14510 FvH4_3g02671 FvH4_3g10870 FvH4_3g16811 FvH4_3g18871 FvH4_3g20011 FvH4_3g29181 FvH4_3g30101 FvH4_3g33941 FvH4_4g08031 FvH4_4g10192 FvH4_4g20791 FvH4_5g02440 FvH4_5g03261 FvH4_5g15791 FvH4_5g22472 FvH4_5g23680 FvH4_5g26530 FvH4_5g26540 FvH4_5g30241 FvH4_5g32311 FvH4_5g38943 FvH4_6g05152 FvH4_6g10481 FvH4_6g14353 FvH4_6g17850 FvH4_6g19460 FvH4_6g23861 FvH4_6g30881 FvH4_6g31722 FvH4_6g40031 FvH4_6g46031 FvH4_6g49021 FvH4_7g12530 FvH4_7g15960
pyrus_communis pycom09g18450
rosa_chinensis RchiOBHm_Chr1g0341771 RchiOBHm_Chr1g0354791 RchiOBHm_Chr2g0095751 RchiOBHm_Chr5g0030691 RchiOBHm_Chr7g0181741 RchiOBHm_Chr7g0222721 RchiOBHm_Chr7g0243191
rosa_laevigata RLG00000001405 RLG00000001878 RLG00000002053 RLG00000002361 RLG00000003846 RLG00000012639 RLG00000013326 RLG00000014331 RLG00000017340 RLG00000017548 RLG00000018177 RLG00000018372 RLG00000019006 RLG00000019406 RLG00000019522 RLG00000019922 RLG00000020489 RLG00000022399 RLG00000023433 RLG00000027372 RLG00000028576 RLG00000028590 RLG00000028947 RLG00000032552 RLG00000033183 RLG00000033245 RLG00000033730 RLG00000034443 RLG00000034772 RLG00000036008
rosa_multiflora Rmu_co8029972.1_g000001 Rmu_co8044978.1_g000001 Rmu_co8338363.1_g000001 Rmu_co8426431.1_g000002 Rmu_co8457575.1_g000001 Rmu_sc0000010.1_g000025 Rmu_sc0000197.1_g000018 Rmu_sc0000220.1_g000009 Rmu_sc0000221.1_g000012 Rmu_sc0000258.1_g000002 Rmu_sc0000284.1_g000015 Rmu_sc0000303.1_g000021 Rmu_sc0000309.1_g000015 Rmu_sc0000317.1_g000017 Rmu_sc0000355.1_g000003 Rmu_sc0000376.1_g000035 Rmu_sc0000420.1_g000009 Rmu_sc0000493.1_g000019 Rmu_sc0000498.1_g000044 Rmu_sc0000540.1_g000015 Rmu_sc0000554.1_g000031 Rmu_sc0000577.1_g000004 Rmu_sc0000647.1_g000007 Rmu_sc0000703.1_g000002 Rmu_sc0000776.1_g000025 Rmu_sc0000924.1_g000044 Rmu_sc0000940.1_g000034 Rmu_sc0000940.1_g000036 Rmu_sc0000990.1_g000014 Rmu_sc0001004.1_g000018 Rmu_sc0001027.1_g000014 Rmu_sc0001059.1_g000004 Rmu_sc0001089.1_g000021 Rmu_sc0001118.1_g000013 Rmu_sc0001141.1_g000024 Rmu_sc0001154.1_g000002 Rmu_sc0001179.1_g000023 Rmu_sc0001230.1_g000014 Rmu_sc0001298.1_g000042 Rmu_sc0001306.1_g000030 Rmu_sc0001306.1_g000036 Rmu_sc0001341.1_g000007 Rmu_sc0001386.1_g000013 Rmu_sc0001461.1_g000019 Rmu_sc0001461.1_g000047 Rmu_sc0001476.1_g000013 Rmu_sc0001516.1_g000032 Rmu_sc0001780.1_g000007 Rmu_sc0001793.1_g000005 Rmu_sc0001911.1_g000013 Rmu_sc0001962.1_g000011 Rmu_sc0001986.1_g000004 Rmu_sc0002061.1_g000021 Rmu_sc0002119.1_g000024 Rmu_sc0002194.1_g000021 Rmu_sc0002284.1_g000019 Rmu_sc0002316.1_g000014 Rmu_sc0002322.1_g000006 Rmu_sc0002351.1_g000107 Rmu_sc0002387.1_g000008 Rmu_sc0002389.1_g000029 Rmu_sc0002507.1_g000001 Rmu_sc0002589.1_g000038 Rmu_sc0002638.1_g000041 Rmu_sc0002656.1_g000007 Rmu_sc0002882.1_g000030 Rmu_sc0002927.1_g000034 Rmu_sc0003024.1_g000020 Rmu_sc0003032.1_g000027 Rmu_sc0003069.1_g000025 Rmu_sc0003268.1_g000002 Rmu_sc0003296.1_g000007 Rmu_sc0003363.1_g000073 Rmu_sc0003527.1_g000017 Rmu_sc0003638.1_g000007 Rmu_sc0003669.1_g000007 Rmu_sc0003882.1_g000021 Rmu_sc0003941.1_g000004 Rmu_sc0003979.1_g000007 Rmu_sc0003983.1_g000007 Rmu_sc0003989.1_g000017 Rmu_sc0004016.1_g000003 Rmu_sc0004020.1_g000025 Rmu_sc0004094.1_g000016 Rmu_sc0004135.1_g000002 Rmu_sc0004154.1_g000014 Rmu_sc0004316.1_g000002 Rmu_sc0004316.1_g000015 Rmu_sc0004321.1_g000013 Rmu_sc0004467.1_g000005 Rmu_sc0004517.1_g000007 Rmu_sc0004642.1_g000012 Rmu_sc0004729.1_g000024 Rmu_sc0004757.1_g000018 Rmu_sc0004788.1_g000003 Rmu_sc0004835.1_g000026 Rmu_sc0004889.1_g000019 Rmu_sc0004991.1_g000009 Rmu_sc0005045.1_g000004 Rmu_sc0005079.1_g000004 Rmu_sc0005083.1_g000008 Rmu_sc0005170.1_g000002 Rmu_sc0005190.1_g000009 Rmu_sc0005217.1_g000010 Rmu_sc0005234.1_g000011 Rmu_sc0005608.1_g000016 Rmu_sc0005802.1_g000029 Rmu_sc0005810.1_g000006 Rmu_sc0005904.1_g000006 Rmu_sc0005967.1_g000012 Rmu_sc0006028.1_g000027 Rmu_sc0006059.1_g000040 Rmu_sc0006423.1_g000002 Rmu_sc0006467.1_g000001 Rmu_sc0006470.1_g000004 Rmu_sc0006598.1_g000003 Rmu_sc0006599.1_g000004 Rmu_sc0006632.1_g000021 Rmu_sc0006707.1_g000008 Rmu_sc0006791.1_g000008 Rmu_sc0006835.1_g000016 Rmu_sc0007100.1_g000002 Rmu_sc0007115.1_g000009 Rmu_sc0007362.1_g000012 Rmu_sc0007461.1_g000004 Rmu_sc0007474.1_g000001 Rmu_sc0007681.1_g000011 Rmu_sc0007697.1_g000003 Rmu_sc0007704.1_g000001 Rmu_sc0007722.1_g000016 Rmu_sc0007843.1_g000001 Rmu_sc0007856.1_g000009 Rmu_sc0008328.1_g000007 Rmu_sc0008780.1_g000005 Rmu_sc0009185.1_g000011 Rmu_sc0009599.1_g000021 Rmu_sc0009881.1_g000002 Rmu_sc0009891.1_g000002 Rmu_sc0010357.1_g000003 Rmu_sc0010781.1_g000005 Rmu_sc0011133.1_g000005 Rmu_sc0012334.1_g000001 Rmu_sc0012569.1_g000015 Rmu_sc0012984.1_g000001 Rmu_sc0013508.1_g000001 Rmu_sc0013550.1_g000005 Rmu_sc0013730.1_g000001 Rmu_sc0013945.1_g000001 Rmu_sc0013945.1_g000003 Rmu_sc0014005.1_g000005 Rmu_sc0014111.1_g000009 Rmu_sc0014111.1_g000010 Rmu_sc0014203.1_g000025 Rmu_sc0014839.1_g000002 Rmu_sc0015410.1_g000001 Rmu_sc0015513.1_g000003 Rmu_sc0015791.1_g000008 Rmu_sc0016657.1_g000004 Rmu_sc0017187.1_g000002 Rmu_sc0017400.1_g000001 Rmu_sc0017895.1_g000006 Rmu_sc0018221.1_g000008 Rmu_sc0018825.1_g000002 Rmu_sc0019047.1_g000001 Rmu_sc0019077.1_g000001 Rmu_sc0019171.1_g000001 Rmu_sc0019299.1_g000002 Rmu_sc0020342.1_g000008 Rmu_sc0020688.1_g000002 Rmu_sc0020688.1_g000003 Rmu_sc0021871.1_g000012 Rmu_sc0022925.1_g000001 Rmu_sc0023965.1_g000005 Rmu_sc0024968.1_g000001 Rmu_sc0024969.1_g000001 Rmu_sc0025035.1_g000002 Rmu_sc0025167.1_g000005 Rmu_sc0025567.1_g000001 Rmu_sc0026096.1_g000001 Rmu_sc0026586.1_g000001 Rmu_sc0028358.1_g000002 Rmu_sc0032171.1_g000001 Rmu_sc0034632.1_g000001 Rmu_sc0034633.1_g000001 Rmu_sc0035481.1_g000001 Rmu_sc0036303.1_g000001 Rmu_sc0039774.1_g000001 Rmu_sc0040023.1_g000002 Rmu_sc0040790.1_g000001 Rmu_sc0041574.1_g000001 Rmu_sc0042768.1_g000003 Rmu_ssc0000038.1_g000016 Rmu_ssc0000062.1_g000035 Rmu_ssc0000083.1_g000009 Rmu_ssc0000093.1_g000006 Rmu_ssc0000112.1_g000023 Rmu_ssc0000155.1_g000007 Rmu_ssc0000171.1_g000017 Rmu_ssc0000196.1_g000017 Rmu_ssc0000257.1_g000027 Rmu_ssc0000323.1_g000023 Rmu_ssc0000440.1_g000011 Rmu_ssc0000454.1_g000021 Rmu_ssc0000473.1_g000011
rosa_roxburghii Rroxscaffold_1G00014010 Rroxscaffold_1G00039470 Rroxscaffold_1G00045350 Rroxscaffold_2G00082440 Rroxscaffold_2G00096630 Rroxscaffold_2G00100560 Rroxscaffold_2G00102600 Rroxscaffold_2G00117720 Rroxscaffold_2G00120390 Rroxscaffold_2G00126010 Rroxscaffold_3G00220680 Rroxscaffold_3G00241760 Rroxscaffold_4G00309670 Rroxscaffold_4G00312380 Rroxscaffold_5G00339950 Rroxscaffold_5G00361980 Rroxscaffold_5G00370500 Rroxscaffold_5G00376480 Rroxscaffold_5G00384070 Rroxscaffold_6G00393690 Rroxscaffold_6G00396520 Rroxscaffold_6G00396850 Rroxscaffold_6G00404790 Rroxscaffold_7G00177690 Rroxscaffold_7G00178170 Rroxscaffold_7G00194330 Rroxscaffold_7G00197090 Rroxscaffold_9G00437910
rosa_rugosa Rorug01G0010100 Rorug01G0035300 Rorug01G0038600 Rorug01G0038700 Rorug01G0050300 Rorug01G0143800.1 Rorug01G0211700 Rorug01G0266600 Rorug01G0268800 Rorug01G0301200 Rorug02G0139800 Rorug02G0247100 Rorug02G0247100 Rorug02G0276800 Rorug02G0283300 Rorug02G0289800 Rorug02G0326700 Rorug02G0368100 Rorug02G0427000 Rorug02G0439100 Rorug02G0611200 Rorug02G0626600 Rorug03G0049100 Rorug03G0108000 Rorug03G0118600 Rorug03G0174300.1 Rorug03G0182300 Rorug03G0189800 Rorug03G0207000 Rorug03G0220700 Rorug03G0229400 Rorug03G0253700 Rorug03G0276500 Rorug03G0283300.1 Rorug03G0283500 Rorug03G0283600 Rorug03G0299600 Rorug04G0052200 Rorug04G0052300 Rorug04G0115800 Rorug04G0159700 Rorug04G0170900 Rorug04G0178100 Rorug04G0250800 Rorug04G0317200 Rorug04G0409500 Rorug05G0022500 Rorug05G0134900 Rorug05G0144800 Rorug05G0158200 Rorug05G0168300 Rorug05G0168400 Rorug05G0168600 Rorug05G0229800 Rorug05G0259100 Rorug05G0285700 Rorug05G0294600 Rorug05G0306400 Rorug05G0335300 Rorug05G0390100 Rorug05G0392900 Rorug05G0407100 Rorug05G0416600 Rorug05G0536900 Rorug05G0550300 Rorug06G0040900 Rorug06G0042800 Rorug06G0093000 Rorug06G0110700 Rorug06G0115600 Rorug06G0205700 Rorug07G0016900.1 Rorug07G0017000 Rorug07G0095200 Rorug07G0106400 Rorug07G0116400 Rorug07G0127300 Rorug07G0151100 Rorug07G0151200 Rorug07G0178200 Rorug07G0224300 Rorug07G0224400 Rorug07G0226400 Rorug07G0258200 Rorug07G0328000 RorugPtG0002700.1
rosa_samantha Rh1BG231600 Rh1BG235500 Rh1DG259300 Rh2AG044200 Rh2AG095600 Rh2AG164800 Rh2AG361400 Rh2AG370600 Rh2AG487800 Rh2AG620400 Rh2BG171900 Rh2BG244600 Rh2BG500300 Rh2CG189500 Rh2CG317600 Rh2CG374400 Rh2CG474300 Rh2DG170300 Rh2DG374800 Rh2DG511500 Rh3AG273400 Rh3AG331300 Rh3CG203900 Rh3CG222200 Rh3CG253800 Rh3CG269900 Rh3DG073800 Rh3DG208100 Rh3DG224000 Rh3DG265900 Rh4AG217200 Rh4BG076000 Rh4BG113200 Rh4BG240700 Rh4BG414300 Rh4CG266600 Rh4CG307600 Rh5BG088500 Rh5BG469000 Rh5CG284400 Rh5CG491200 Rh5CG557400 Rh5DG399000 Rh6AG457400 Rh6BG339800 Rh6BG443700 Rh6CG115400 Rh6CG471500 Rh6DG390100 Rh6DG457900 Rh7AG372100 Rh7AG429800 Rh7AG484600 Rh7BG176400 Rh7BG233900 Rh7BG244400 Rh7BG279800 Rh7BG285100 Rh7CG172200 Rh7CG390500 Rh7CG502600 Rh7CG518200 Rh7DG252500 Rh7DG294200 Rh7DG376400 Rh7DG390100
rosa_wichuraiana Rw0G001650

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 754
Acc16I TGCGCA 1 cut(s) 477
Acc65I GGTACC 2 cut(s) 613, 652
AccB1I GGYRCC 3 cut(s) 568, 613, 652
AccII CGCG 1 cut(s) 351
AccIII TCCGGA 1 cut(s) 1627
AciI CCGC 4 cut(s) 92, 188, 650, 1310
AclWI GGATC 3 cut(s) 166, 984, 1029
AcoI YGGCCR 2 cut(s) 876, 1540
AcsI RAATTY 2 cut(s) 17, 60
AcuI CTGAAG 3 cut(s) 184, 1021, 1046
AcyI GRCGYC 1 cut(s) 751
AfaI GTAC 5 cut(s) 120, 615, 654, 964, 1536
AfiI CCNNNNNNNGG 7 cut(s) 56, 316, 317, 369, 1193, 1604, 1691
AgeI ACCGGT 1 cut(s) 1600
AgsI TTSAA 6 cut(s) 229, 360, 499, 718, 1274, 1799
AjnI CCWGG 2 cut(s) 463, 572
AjuI GAANNNNNNNTTGG 2 cut(s) 710, 742
AluBI AGCT 4 cut(s) 453, 1339, 1507, 1736
AluI AGCT 4 cut(s) 453, 1339, 1507, 1736
Alw21I GWGCWC 1 cut(s) 1380
Alw44I GTGCAC 1 cut(s) 1376
AlwI GGATC 3 cut(s) 166, 984, 1029
Aor13HI TCCGGA 1 cut(s) 1627
AoxI GGCC 5 cut(s) 876, 1441, 1540, 1649, 1729
ApaLI GTGCAC 1 cut(s) 1376
ApeKI GCWGC 5 cut(s) 257, 380, 762, 865, 1183
ApoI RAATTY 2 cut(s) 17, 60
AsiGI ACCGGT 1 cut(s) 1600
Asp700I GAANNNNTTC 1 cut(s) 503
Asp718I GGTACC 2 cut(s) 613, 652
AspLEI GCGC 3 cut(s) 193, 478, 630
AspS9I GGNCC 5 cut(s) 1148, 1442, 1625, 1730, 1744
AsuHPI GGTGA 6 cut(s) 85, 305, 565, 988, 1573, 1666
AvaII GGWCC 3 cut(s) 1148, 1625, 1744
BaeGI GKGCMC 2 cut(s) 573, 1380
BalI TGGCCA 1 cut(s) 878
BanI GGYRCC 3 cut(s) 568, 613, 652
BanII GRGCYC 1 cut(s) 49
BauI CACGAG 1 cut(s) 1172
Bbv12I GWGCWC 1 cut(s) 1380
BbvI GCAGC 5 cut(s) 244, 367, 774, 852, 1195
BceAI ACGGC 3 cut(s) 1029, 1457, 1555
BcgI CGANNNNNNTGC 2 cut(s) 800, 834
BciT130I CCWGG 2 cut(s) 465, 574
BclI TGATCA 1 cut(s) 1656
BfaI CTAG 6 cut(s) 152, 405, 741, 795, 1088, 1508
BfoI RGCGCY 1 cut(s) 194
BglI GCCNNNNNGGC 1 cut(s) 1648
BglII AGATCT 1 cut(s) 1510
BisI GCNGC 6 cut(s) 189, 258, 381, 763, 866, 1184
BlsI GCNGC 6 cut(s) 190, 259, 382, 764, 867, 1185
Bme1390I CCNGG 2 cut(s) 465, 574
Bme18I GGWCC 3 cut(s) 1148, 1625, 1744
BmgT120I GGNCC 5 cut(s) 1148, 1442, 1625, 1730, 1744
BmiI GGNNCC 7 cut(s) 48, 570, 615, 654, 1626, 1683, 1745
BmrFI CCNGG 2 cut(s) 465, 574
BmsI GCATC 6 cut(s) 259, 648, 820, 1336, 1587, 1834
BpmI CTGGAG 2 cut(s) 266, 1248
Bpu10I CCTNAGC 1 cut(s) 513
BpuEI CTTGAG 1 cut(s) 1391
Bsa29I ATCGAT 3 cut(s) 446, 642, 885
BsaHI GRCGYC 1 cut(s) 751
BsaJI CCNNGG 5 cut(s) 572, 756, 1151, 1482, 1643
BsaWI WCCGGW 3 cut(s) 697, 1600, 1627
BsaXI ACNNNNNCTCC 2 cut(s) 520, 550
Bsc4I CCNNNNNNNGG 7 cut(s) 56, 316, 317, 369, 1193, 1604, 1691
Bse118I RCCGGY 5 cut(s) 94, 166, 682, 1600, 1651
Bse1I ACTGG 3 cut(s) 402, 518, 1814
Bse3DI GCAATG 2 cut(s) 906, 1287
BseAI TCCGGA 1 cut(s) 1627
BseBI CCWGG 2 cut(s) 465, 574
BseCI ATCGAT 3 cut(s) 446, 642, 885
BseDI CCNNGG 5 cut(s) 572, 756, 1151, 1482, 1643
BseLI CCNNNNNNNGG 7 cut(s) 56, 316, 317, 369, 1193, 1604, 1691
BseMI GCAATG 2 cut(s) 906, 1287
BseMII CTCAG 3 cut(s) 24, 936, 1129
BseNI ACTGG 3 cut(s) 402, 518, 1814
BseSI GKGCMC 2 cut(s) 573, 1380
BseXI GCAGC 5 cut(s) 244, 367, 774, 852, 1195
BseYI CCCAGC 1 cut(s) 1732
BsgI GTGCAG 1 cut(s) 366
Bsh1236I CGCG 1 cut(s) 351
Bsh1285I CGRYCG 1 cut(s) 1214
BshFI GGCC 5 cut(s) 878, 1443, 1542, 1651, 1731
BshNI GGYRCC 3 cut(s) 568, 613, 652
BshTI ACCGGT 1 cut(s) 1600
BshVI ATCGAT 3 cut(s) 446, 642, 885
BsiEI CGRYCG 1 cut(s) 1214
BsiHKAI GWGCWC 1 cut(s) 1380
BsiSI CCGG 9 cut(s) 95, 167, 175, 683, 698, 808, 1601, 1628, 1652
BslFI GGGAC 3 cut(s) 738, 796, 1757
BslI CCNNNNNNNGG 7 cut(s) 56, 316, 317, 369, 1193, 1604, 1691
BsmFI GGGAC 3 cut(s) 738, 796, 1757
BsnI GGCC 5 cut(s) 878, 1443, 1542, 1651, 1731
Bsp1286I GDGCHC 3 cut(s) 49, 573, 1380
Bsp13I TCCGGA 1 cut(s) 1627
Bsp1407I TGTACA 1 cut(s) 118
Bsp19I CCATGG 2 cut(s) 1151, 1482
BspACI CCGC 4 cut(s) 92, 188, 650, 1310
BspANI GGCC 5 cut(s) 878, 1443, 1542, 1651, 1731
BspCNI CTCAG 3 cut(s) 25, 937, 1128
BspDI ATCGAT 3 cut(s) 446, 642, 885
BspEI TCCGGA 1 cut(s) 1627
BspFNI CGCG 1 cut(s) 351
BspHI TCATGA 1 cut(s) 1432
BspLI GGNNCC 7 cut(s) 48, 570, 615, 654, 1626, 1683, 1745
BspPI GGATC 3 cut(s) 166, 984, 1029
BspT107I GGYRCC 3 cut(s) 568, 613, 652
BsrDI GCAATG 2 cut(s) 906, 1287
BsrFI RCCGGY 5 cut(s) 94, 166, 682, 1600, 1651
BsrGI TGTACA 1 cut(s) 118
BsrI ACTGG 3 cut(s) 402, 518, 1814
BssAI RCCGGY 5 cut(s) 94, 166, 682, 1600, 1651
BssECI CCNNGG 5 cut(s) 572, 756, 1151, 1482, 1643
BssNI GRCGYC 1 cut(s) 751
BssSI CACGAG 1 cut(s) 1172
BssT1I CCWWGG 4 cut(s) 756, 1151, 1482, 1643
Bst2BI CACGAG 1 cut(s) 1172
Bst2UI CCWGG 2 cut(s) 465, 574
Bst4CI ACNGT 3 cut(s) 387, 495, 1418
BstACI GRCGYC 1 cut(s) 751
BstAUI TGTACA 1 cut(s) 118
BstC8I GCNNGC 8 cut(s) 6, 96, 168, 262, 486, 626, 903, 1640
BstDEI CTNAG 7 cut(s) 33, 513, 633, 732, 945, 1115, 1737
BstDSI CCRYGG 2 cut(s) 1151, 1482
BstFNI CGCG 1 cut(s) 351
BstH2I RGCGCY 1 cut(s) 194
BstHHI GCGC 3 cut(s) 193, 478, 630
BstMCI CGRYCG 1 cut(s) 1214
BstMWI GCNNNNNNNGC 9 cut(s) 204, 636, 737, 771, 829, 1216, 1449, 1594, 1648
BstNI CCWGG 2 cut(s) 465, 574
BstNSI RCATGY 1 cut(s) 1408
BstSCI CCNGG 2 cut(s) 463, 572
BstSLI GKGCMC 2 cut(s) 573, 1380
BstUI CGCG 1 cut(s) 351
BstV1I GCAGC 5 cut(s) 244, 367, 774, 852, 1195
BstX2I RGATCY 2 cut(s) 1021, 1510
BstXI CCANNNNNNTGG 1 cut(s) 1740
BstYI RGATCY 2 cut(s) 1021, 1510
Bsu15I ATCGAT 3 cut(s) 446, 642, 885
BsuRI GGCC 5 cut(s) 878, 1443, 1542, 1651, 1731
BsuTUI ATCGAT 3 cut(s) 446, 642, 885
BtgI CCRYGG 2 cut(s) 1151, 1482
BtgZI GCGATG 1 cut(s) 1031
BtsI GCAGTG 1 cut(s) 1205
BtsIMutI CAGTG 3 cut(s) 105, 525, 1205
Cac8I GCNNGC 8 cut(s) 6, 96, 168, 262, 486, 626, 903, 1640
CciI TCATGA 1 cut(s) 1432
CfoI GCGC 3 cut(s) 193, 478, 630
Cfr10I RCCGGY 5 cut(s) 94, 166, 682, 1600, 1651
Cfr13I GGNCC 5 cut(s) 1148, 1442, 1625, 1730, 1744
ClaI ATCGAT 3 cut(s) 446, 642, 885
CseI GACGC 1 cut(s) 787
Csp6I GTAC 5 cut(s) 119, 614, 653, 963, 1535
CspAI ACCGGT 1 cut(s) 1600
CspCI CAANNNNNGTGG 2 cut(s) 381, 416
CviAII CATG 8 cut(s) 874, 940, 1152, 1405, 1433, 1446, 1459, 1483
CviQI GTAC 5 cut(s) 119, 614, 653, 963, 1535
DdeI CTNAG 7 cut(s) 33, 513, 633, 732, 945, 1115, 1737
EaeI YGGCCR 2 cut(s) 876, 1540
Eco130I CCWWGG 4 cut(s) 756, 1151, 1482, 1643
Eco24I GRGCYC 1 cut(s) 49
Eco47I GGWCC 3 cut(s) 1148, 1625, 1744
Eco57I CTGAAG 3 cut(s) 184, 1021, 1046
EcoRII CCWGG 2 cut(s) 463, 572
EcoT14I CCWWGG 4 cut(s) 756, 1151, 1482, 1643
EcoT38I GRGCYC 1 cut(s) 49
ErhI CCWWGG 4 cut(s) 756, 1151, 1482, 1643
FaeI CATG 8 cut(s) 877, 943, 1155, 1408, 1436, 1449, 1462, 1486
FalI AAGNNNNNCTT 2 cut(s) 1019, 1051
FaqI GGGAC 3 cut(s) 738, 796, 1757
FatI CATG 8 cut(s) 873, 939, 1151, 1404, 1432, 1445, 1458, 1482
FauI CCCGC 1 cut(s) 1303
FauNDI CATATG 2 cut(s) 1221, 1726
FbaI TGATCA 1 cut(s) 1656
Fnu4HI GCNGC 6 cut(s) 189, 258, 381, 763, 866, 1184
FriOI GRGCYC 1 cut(s) 49
Fsp4HI GCNGC 6 cut(s) 189, 258, 381, 763, 866, 1184
FspBI CTAG 6 cut(s) 152, 405, 741, 795, 1088, 1508
FspI TGCGCA 1 cut(s) 477
GlaI GCGC 3 cut(s) 192, 477, 629
GluI GCNGC 6 cut(s) 189, 258, 381, 763, 866, 1184
GsaI CCCAGC 1 cut(s) 1736
GsuI CTGGAG 2 cut(s) 266, 1248
HaeII RGCGCY 1 cut(s) 194
HaeIII GGCC 5 cut(s) 878, 1443, 1542, 1651, 1731
HapII CCGG 9 cut(s) 95, 167, 175, 683, 698, 808, 1601, 1628, 1652
HgaI GACGC 1 cut(s) 787
HhaI GCGC 3 cut(s) 193, 478, 630
Hin1I GRCGYC 1 cut(s) 751
Hin1II CATG 8 cut(s) 877, 943, 1155, 1408, 1436, 1449, 1462, 1486
Hin6I GCGC 3 cut(s) 191, 476, 628
HinP1I GCGC 3 cut(s) 191, 476, 628
HinfI GANTC 3 cut(s) 887, 1057, 1631
HpaII CCGG 9 cut(s) 95, 167, 175, 683, 698, 808, 1601, 1628, 1652
HphI GGTGA 6 cut(s) 85, 305, 565, 988, 1573, 1666
Hpy166II GTNNAC 7 cut(s) 105, 928, 956, 1148, 1378, 1537, 1551
Hpy188I TCNGA 3 cut(s) 51, 1026, 1789
Hpy188III TCNNGA 8 cut(s) 245, 393, 1117, 1322, 1370, 1433, 1628, 1780
Hpy8I GTNNAC 7 cut(s) 105, 928, 956, 1148, 1378, 1537, 1551
Hpy99I CGWCG 1 cut(s) 1015
HpyAV CCTTC 5 cut(s) 712, 730, 1550, 1672, 1793
HpyCH4III ACNGT 3 cut(s) 387, 495, 1418
HpyCH4IV ACGT 1 cut(s) 751
HpyF10VI GCNNNNNNNGC 9 cut(s) 204, 636, 737, 771, 829, 1216, 1449, 1594, 1648
HpyF3I CTNAG 7 cut(s) 33, 513, 633, 732, 945, 1115, 1737
HpySE526I ACGT 1 cut(s) 751
Hsp92I GRCGYC 1 cut(s) 751
Hsp92II CATG 8 cut(s) 877, 943, 1155, 1408, 1436, 1449, 1462, 1486
HspAI GCGC 3 cut(s) 191, 476, 628
Kpn2I TCCGGA 1 cut(s) 1627
KpnI GGTACC 2 cut(s) 617, 656
KroI GCCGGC 2 cut(s) 94, 166
KroNI GCCGGC 2 cut(s) 96, 168
Ksp22I TGATCA 1 cut(s) 1656
LmnI GCTCC 3 cut(s) 52, 247, 421
Lsp1109I GCAGC 5 cut(s) 244, 367, 774, 852, 1195
LweI GCATC 6 cut(s) 259, 648, 820, 1336, 1587, 1834
MaeI CTAG 6 cut(s) 152, 405, 741, 795, 1088, 1508
MaeII ACGT 1 cut(s) 751
MaeIII GTNAC 1 cut(s) 1297
MboII GAAGA 3 cut(s) 841, 1228, 1815
MflI RGATCY 2 cut(s) 1021, 1510
MhlI GDGCHC 3 cut(s) 49, 573, 1380
MlsI TGGCCA 1 cut(s) 878
MluCI AATT 4 cut(s) 17, 60, 803, 1769
MluNI TGGCCA 1 cut(s) 878
MlyI GAGTC 2 cut(s) 1066, 1640
MmeI TCCRAC 2 cut(s) 651, 727
Mox20I TGGCCA 1 cut(s) 878
MroI TCCGGA 1 cut(s) 1627
MroNI GCCGGC 2 cut(s) 94, 166
MroXI GAANNNNTTC 1 cut(s) 503
MscI TGGCCA 1 cut(s) 878
MseI TTAA 3 cut(s) 588, 1068, 1161
Msp20I TGGCCA 1 cut(s) 878
MspA1I CMGCKG 1 cut(s) 188
MspI CCGG 9 cut(s) 95, 167, 175, 683, 698, 808, 1601, 1628, 1652
MspR9I CCNGG 2 cut(s) 465, 574
MvaI CCWGG 2 cut(s) 465, 574
MvnI CGCG 1 cut(s) 351
MwoI GCNNNNNNNGC 9 cut(s) 204, 636, 737, 771, 829, 1216, 1449, 1594, 1648
NaeI GCCGGC 2 cut(s) 96, 168
NcoI CCATGG 2 cut(s) 1151, 1482
NdeI CATATG 2 cut(s) 1221, 1726
NgoMIV GCCGGC 2 cut(s) 94, 166
NlaIII CATG 8 cut(s) 877, 943, 1155, 1408, 1436, 1449, 1462, 1486
NlaIV GGNNCC 7 cut(s) 48, 570, 615, 654, 1626, 1683, 1745
NmuCI GTSAC 1 cut(s) 1297
NsbI TGCGCA 1 cut(s) 477
NspI RCATGY 1 cut(s) 1408
PagI TCATGA 1 cut(s) 1432
PcsI WCGNNNNNNNCGW 1 cut(s) 1007
PdiI GCCGGC 2 cut(s) 96, 168
PdmI GAANNNNTTC 1 cut(s) 503
PfeI GAWTC 1 cut(s) 887
PinAI ACCGGT 1 cut(s) 1600
PkrI GCNGC 6 cut(s) 190, 259, 382, 764, 867, 1185
Ple19I CGATCG 1 cut(s) 1214
PleI GAGTC 2 cut(s) 1065, 1639
PpsI GAGTC 2 cut(s) 1065, 1639
Psp6I CCWGG 2 cut(s) 463, 572
PspFI CCCAGC 1 cut(s) 1732
PspGI CCWGG 2 cut(s) 463, 572
PspN4I GGNNCC 7 cut(s) 48, 570, 615, 654, 1626, 1683, 1745
PspPI GGNCC 5 cut(s) 1148, 1442, 1625, 1730, 1744
PsuI RGATCY 2 cut(s) 1021, 1510
PvuI CGATCG 1 cut(s) 1214
RsaI GTAC 5 cut(s) 120, 615, 654, 964, 1536
RsaNI GTAC 5 cut(s) 119, 614, 653, 963, 1535
SaqAI TTAA 3 cut(s) 588, 1068, 1161
SatI GCNGC 6 cut(s) 189, 258, 381, 763, 866, 1184
Sau96I GGNCC 5 cut(s) 1148, 1442, 1625, 1730, 1744
SchI GAGTC 2 cut(s) 1066, 1640
ScrFI CCNGG 2 cut(s) 465, 574
SduI GDGCHC 3 cut(s) 49, 573, 1380
SfaNI GCATC 6 cut(s) 259, 648, 820, 1336, 1587, 1834
SgrAI CRCCGGYG 1 cut(s) 1600
SinI GGWCC 3 cut(s) 1148, 1625, 1744
SmlI CTYRAG 1 cut(s) 1370
SmoI CTYRAG 1 cut(s) 1370
Sse9I AATT 4 cut(s) 17, 60, 803, 1769
SsiI CCGC 4 cut(s) 92, 188, 650, 1310
SspMI CTAG 6 cut(s) 152, 405, 741, 795, 1088, 1508
StyD4I CCNGG 2 cut(s) 463, 572
StyI CCWWGG 4 cut(s) 756, 1151, 1482, 1643
TaaI ACNGT 3 cut(s) 387, 495, 1418
TaiI ACGT 1 cut(s) 754
TaqI TCGA 5 cut(s) 159, 446, 642, 885, 1165
TasI AATT 4 cut(s) 17, 60, 803, 1769
TatI WGTACW 2 cut(s) 118, 1534
TauI GCSGC 1 cut(s) 191
TfiI GAWTC 1 cut(s) 887
Tru1I TTAA 3 cut(s) 588, 1068, 1161
Tru9I TTAA 3 cut(s) 588, 1068, 1161
TscAI CASTG 3 cut(s) 112, 525, 1212
TseFI GTSAC 1 cut(s) 1297
TseI GCWGC 5 cut(s) 257, 380, 762, 865, 1183
Tsp45I GTSAC 1 cut(s) 1297
TspDTI ATGAA 3 cut(s) 445, 572, 1421
TspGWI ACGGA 1 cut(s) 1568
TspRI CASTG 3 cut(s) 112, 525, 1212
VneI GTGCAC 1 cut(s) 1376
VpaK11BI GGWCC 3 cut(s) 1148, 1625, 1744
XapI RAATTY 2 cut(s) 17, 60
XceI RCATGY 1 cut(s) 1408
XmnI GAANNNNTTC 1 cut(s) 503
XspI CTAG 6 cut(s) 152, 405, 741, 795, 1088, 1508
ZraI GACGTC 1 cut(s) 752
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.