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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 188 |
| Acc36I | ACCTGC | 1 cut(s) | 329 |
| Acc65I | GGTACC | 1 cut(s) | 256 |
| AccB1I | GGYRCC | 1 cut(s) | 256 |
| AccII | CGCG | 1 cut(s) | 153 |
| AcsI | RAATTY | 2 cut(s) | 67, 271 |
| AcuI | CTGAAG | 1 cut(s) | 97 |
| AfaI | GTAC | 2 cut(s) | 258, 473 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 453 |
| AgeI | ACCGGT | 1 cut(s) | 193 |
| AgsI | TTSAA | 4 cut(s) | 122, 246, 284, 293 |
| AleI | CACNNNNGTG | 1 cut(s) | 402 |
| AluBI | AGCT | 3 cut(s) | 111, 215, 251 |
| AluI | AGCT | 3 cut(s) | 111, 215, 251 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 480, 490 |
| AoxI | GGCC | 1 cut(s) | 3 |
| ApeKI | GCWGC | 2 cut(s) | 215, 484 |
| ApoI | RAATTY | 2 cut(s) | 67, 271 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 379, 411 |
| AsiGI | ACCGGT | 1 cut(s) | 193 |
| Asp718I | GGTACC | 1 cut(s) | 256 |
| AspLEI | GCGC | 2 cut(s) | 155, 189 |
| BanI | GGYRCC | 1 cut(s) | 256 |
| BbsI | GAAGAC | 1 cut(s) | 291 |
| BbvI | GCAGC | 2 cut(s) | 202, 496 |
| BccI | CCATC | 1 cut(s) | 143 |
| BfaI | CTAG | 1 cut(s) | 362 |
| BfmI | CTRYAG | 1 cut(s) | 309 |
| BfuAI | ACCTGC | 1 cut(s) | 329 |
| BisI | GCNGC | 2 cut(s) | 216, 485 |
| BlpI | GCTNAGC | 1 cut(s) | 497 |
| BlsI | GCNGC | 2 cut(s) | 217, 486 |
| BmiI | GGNNCC | 1 cut(s) | 258 |
| BmsI | GCATC | 2 cut(s) | 361, 483 |
| BpiI | GAAGAC | 1 cut(s) | 291 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 497 |
| BsaWI | WCCGGW | 2 cut(s) | 51, 193 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 453 |
| Bse118I | RCCGGY | 1 cut(s) | 193 |
| Bse1I | ACTGG | 2 cut(s) | 322, 485 |
| BseGI | GGATG | 1 cut(s) | 376 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 453 |
| BseMII | CTCAG | 1 cut(s) | 511 |
| BseNI | ACTGG | 2 cut(s) | 322, 485 |
| BseXI | GCAGC | 2 cut(s) | 202, 496 |
| Bsh1236I | CGCG | 1 cut(s) | 153 |
| BshFI | GGCC | 1 cut(s) | 5 |
| BshNI | GGYRCC | 1 cut(s) | 256 |
| BshTI | ACCGGT | 1 cut(s) | 193 |
| BsiSI | CCGG | 2 cut(s) | 52, 194 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 453 |
| BsnI | GGCC | 1 cut(s) | 5 |
| Bsp143I | GATC | 1 cut(s) | 265 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 497 |
| BspANI | GGCC | 1 cut(s) | 5 |
| BspCNI | CTCAG | 1 cut(s) | 510 |
| BspFNI | CGCG | 1 cut(s) | 153 |
| BspLI | GGNNCC | 1 cut(s) | 258 |
| BspMI | ACCTGC | 1 cut(s) | 329 |
| BspT107I | GGYRCC | 1 cut(s) | 256 |
| BsrFI | RCCGGY | 1 cut(s) | 193 |
| BsrI | ACTGG | 2 cut(s) | 322, 485 |
| BssAI | RCCGGY | 1 cut(s) | 193 |
| BssMI | GATC | 1 cut(s) | 265 |
| Bst6I | CTCTTC | 1 cut(s) | 145 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 493 |
| BstDEI | CTNAG | 2 cut(s) | 400, 497 |
| BstF5I | GGATG | 1 cut(s) | 376 |
| BstFNI | CGCG | 1 cut(s) | 153 |
| BstHHI | GCGC | 2 cut(s) | 155, 189 |
| BstKTI | GATC | 1 cut(s) | 268 |
| BstMBI | GATC | 1 cut(s) | 265 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 493 |
| BstNSI | RCATGY | 1 cut(s) | 354 |
| BstSFI | CTRYAG | 1 cut(s) | 309 |
| BstUI | CGCG | 1 cut(s) | 153 |
| BstV1I | GCAGC | 2 cut(s) | 202, 496 |
| BstV2I | GAAGAC | 1 cut(s) | 291 |
| BsuRI | GGCC | 1 cut(s) | 5 |
| BtsCI | GGATG | 1 cut(s) | 376 |
| BveI | ACCTGC | 1 cut(s) | 329 |
| CaiI | CAGNNNCTG | 2 cut(s) | 480, 490 |
| CfoI | GCGC | 2 cut(s) | 155, 189 |
| Cfr10I | RCCGGY | 1 cut(s) | 193 |
| CseI | GACGC | 1 cut(s) | 396 |
| Csp6I | GTAC | 2 cut(s) | 257, 472 |
| CspAI | ACCGGT | 1 cut(s) | 193 |
| CviAII | CATG | 3 cut(s) | 22, 351, 516 |
| CviJI | RGCY | 5 cut(s) | 5, 96, 111, 215, 251 |
| CviKI_1 | RGCY | 5 cut(s) | 5, 96, 111, 215, 251 |
| CviQI | GTAC | 2 cut(s) | 257, 472 |
| DdeI | CTNAG | 2 cut(s) | 400, 497 |
| DpnI | GATC | 1 cut(s) | 267 |
| DpnII | GATC | 1 cut(s) | 265 |
| Eam1104I | CTCTTC | 1 cut(s) | 145 |
| EarI | CTCTTC | 1 cut(s) | 145 |
| Eco57I | CTGAAG | 1 cut(s) | 97 |
| FaeI | CATG | 3 cut(s) | 25, 354, 519 |
| FaiI | YATR | 5 cut(s) | 23, 344, 352, 517, 523 |
| FatI | CATG | 3 cut(s) | 21, 350, 515 |
| Fnu4HI | GCNGC | 2 cut(s) | 216, 485 |
| FokI | GGATG | 1 cut(s) | 383 |
| Fsp4HI | GCNGC | 2 cut(s) | 216, 485 |
| FspBI | CTAG | 1 cut(s) | 362 |
| FspI | TGCGCA | 1 cut(s) | 188 |
| GlaI | GCGC | 2 cut(s) | 154, 188 |
| GluI | GCNGC | 2 cut(s) | 216, 485 |
| HaeIII | GGCC | 1 cut(s) | 5 |
| HapII | CCGG | 2 cut(s) | 52, 194 |
| HgaI | GACGC | 1 cut(s) | 396 |
| HhaI | GCGC | 2 cut(s) | 155, 189 |
| Hin1II | CATG | 3 cut(s) | 25, 354, 519 |
| Hin6I | GCGC | 2 cut(s) | 153, 187 |
| HinP1I | GCGC | 2 cut(s) | 153, 187 |
| HincII | GTYRAC | 1 cut(s) | 442 |
| HindII | GTYRAC | 1 cut(s) | 442 |
| HindIII | AAGCTT | 1 cut(s) | 109 |
| HinfI | GANTC | 2 cut(s) | 394, 463 |
| HpaII | CCGG | 2 cut(s) | 52, 194 |
| Hpy166II | GTNNAC | 2 cut(s) | 382, 442 |
| Hpy188I | TCNGA | 2 cut(s) | 270, 412 |
| Hpy188III | TCNNGA | 4 cut(s) | 76, 246, 277, 356 |
| Hpy8I | GTNNAC | 2 cut(s) | 382, 442 |
| HpyAV | CCTTC | 3 cut(s) | 24, 226, 287 |
| HpyCH4IV | ACGT | 1 cut(s) | 432 |
| HpyCH4V | TGCA | 5 cut(s) | 40, 101, 338, 350, 374 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 493 |
| HpyF3I | CTNAG | 2 cut(s) | 400, 497 |
| HpySE526I | ACGT | 1 cut(s) | 432 |
| Hsp92II | CATG | 3 cut(s) | 25, 354, 519 |
| HspAI | GCGC | 2 cut(s) | 153, 187 |
| KpnI | GGTACC | 1 cut(s) | 260 |
| Kzo9I | GATC | 1 cut(s) | 265 |
| LpnPI | CCDG | 9 cut(s) | 65, 89, 207, 324, 335, 341, 460, 466, 487 |
| Lsp1109I | GCAGC | 2 cut(s) | 202, 496 |
| LweI | GCATC | 2 cut(s) | 361, 483 |
| MaeI | CTAG | 1 cut(s) | 362 |
| MaeII | ACGT | 1 cut(s) | 432 |
| MaeIII | GTNAC | 1 cut(s) | 395 |
| MalI | GATC | 1 cut(s) | 267 |
| MboI | GATC | 1 cut(s) | 265 |
| MboII | GAAGA | 2 cut(s) | 132, 296 |
| MluCI | AATT | 2 cut(s) | 67, 271 |
| MlyI | GAGTC | 1 cut(s) | 403 |
| MnlI | CCTC | 4 cut(s) | 16, 18, 159, 459 |
| MseI | TTAA | 1 cut(s) | 317 |
| MslI | CAYNNNNRTG | 2 cut(s) | 402, 520 |
| MspI | CCGG | 2 cut(s) | 52, 194 |
| MvnI | CGCG | 1 cut(s) | 153 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 493 |
| NdeII | GATC | 1 cut(s) | 265 |
| NlaIII | CATG | 3 cut(s) | 25, 354, 519 |
| NlaIV | GGNNCC | 1 cut(s) | 258 |
| NmuCI | GTSAC | 1 cut(s) | 395 |
| NsbI | TGCGCA | 1 cut(s) | 188 |
| NspI | RCATGY | 1 cut(s) | 354 |
| OliI | CACNNNNGTG | 1 cut(s) | 402 |
| PfeI | GAWTC | 1 cut(s) | 463 |
| PinAI | ACCGGT | 1 cut(s) | 193 |
| PkrI | GCNGC | 2 cut(s) | 217, 486 |
| PleI | GAGTC | 1 cut(s) | 402 |
| PpsI | GAGTC | 1 cut(s) | 402 |
| PspN4I | GGNNCC | 1 cut(s) | 258 |
| PstNI | CAGNNNCTG | 2 cut(s) | 480, 490 |
| RsaI | GTAC | 2 cut(s) | 258, 473 |
| RsaNI | GTAC | 2 cut(s) | 257, 472 |
| RseI | CAYNNNNRTG | 2 cut(s) | 402, 520 |
| SaqAI | TTAA | 1 cut(s) | 317 |
| SatI | GCNGC | 2 cut(s) | 216, 485 |
| Sau3AI | GATC | 1 cut(s) | 265 |
| SchI | GAGTC | 1 cut(s) | 403 |
| SetI | ASST | 7 cut(s) | 16, 113, 217, 253, 343, 406, 435 |
| SfaNI | GCATC | 2 cut(s) | 361, 483 |
| SfcI | CTRYAG | 1 cut(s) | 309 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 402, 520 |
| Sse9I | AATT | 2 cut(s) | 67, 271 |
| SspMI | CTAG | 1 cut(s) | 362 |
| TaiI | ACGT | 1 cut(s) | 435 |
| TaqI | TCGA | 2 cut(s) | 17, 276 |
| TasI | AATT | 2 cut(s) | 67, 271 |
| TfiI | GAWTC | 1 cut(s) | 463 |
| Tru1I | TTAA | 1 cut(s) | 317 |
| Tru9I | TTAA | 1 cut(s) | 317 |
| TseFI | GTSAC | 1 cut(s) | 395 |
| TseI | GCWGC | 2 cut(s) | 215, 484 |
| Tsp45I | GTSAC | 1 cut(s) | 395 |
| XapI | RAATTY | 2 cut(s) | 67, 271 |
| XceI | RCATGY | 1 cut(s) | 354 |
| XspI | CTAG | 1 cut(s) | 362 |