Domain of unknown function (DUF4283)
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| zf-CCHC_4 | PF14392 | 65 - 112 | 5.8e-08 | Zinc knuckle |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 2 cut(s) | 781, 848 |
| AciI | CCGC | 3 cut(s) | 103, 251, 843 |
| AcoI | YGGCCR | 2 cut(s) | 49, 427 |
| AcuI | CTGAAG | 2 cut(s) | 684, 780 |
| AcyI | GRCGYC | 2 cut(s) | 5, 782 |
| AfaI | GTAC | 4 cut(s) | 43, 57, 504, 735 |
| AfeI | AGCGCT | 1 cut(s) | 683 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 401 |
| AflII | CTTAAG | 1 cut(s) | 677 |
| AgsI | TTSAA | 2 cut(s) | 442, 538 |
| AjnI | CCWGG | 1 cut(s) | 498 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 518, 550 |
| AluBI | AGCT | 4 cut(s) | 577, 581, 638, 822 |
| AluI | AGCT | 4 cut(s) | 577, 581, 638, 822 |
| Alw21I | GWGCWC | 1 cut(s) | 744 |
| Alw26I | GTCTC | 3 cut(s) | 12, 190, 262 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 641 |
| Aor51HI | AGCGCT | 1 cut(s) | 683 |
| AoxI | GGCC | 2 cut(s) | 49, 427 |
| ApeKI | GCWGC | 5 cut(s) | 338, 389, 635, 822, 825 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 137, 169 |
| AspLEI | GCGC | 3 cut(s) | 481, 684, 784 |
| AspS9I | GGNCC | 2 cut(s) | 377, 496 |
| AsuC2I | CCSGG | 1 cut(s) | 53 |
| AsuHPI | GGTGA | 4 cut(s) | 308, 566, 699, 736 |
| AsuNHI | GCTAGC | 1 cut(s) | 577 |
| AvaII | GGWCC | 2 cut(s) | 377, 496 |
| BalI | TGGCCA | 1 cut(s) | 429 |
| BanI | GGYRCC | 2 cut(s) | 781, 848 |
| Bbv12I | GWGCWC | 1 cut(s) | 744 |
| BbvI | GCAGC | 5 cut(s) | 325, 376, 647, 809, 812 |
| BccI | CCATC | 2 cut(s) | 316, 818 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 400, 434 |
| BciT130I | CCWGG | 1 cut(s) | 500 |
| BcnI | CCSGG | 1 cut(s) | 53 |
| BcoDI | GTCTC | 3 cut(s) | 12, 190, 262 |
| BfaI | CTAG | 3 cut(s) | 245, 401, 578 |
| BfmI | CTRYAG | 2 cut(s) | 351, 698 |
| BfoI | RGCGCY | 2 cut(s) | 685, 785 |
| BfrI | CTTAAG | 1 cut(s) | 677 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 790 |
| BisI | GCNGC | 5 cut(s) | 339, 390, 636, 823, 826 |
| BlsI | GCNGC | 5 cut(s) | 340, 391, 637, 824, 827 |
| BmcAI | AGTACT | 1 cut(s) | 735 |
| Bme1390I | CCNGG | 2 cut(s) | 53, 500 |
| Bme18I | GGWCC | 2 cut(s) | 377, 496 |
| BmgT120I | GGNCC | 2 cut(s) | 377, 496 |
| BmiI | GGNNCC | 5 cut(s) | 26, 127, 783, 794, 850 |
| BmrFI | CCNGG | 2 cut(s) | 53, 500 |
| BmsI | GCATC | 1 cut(s) | 739 |
| BmtI | GCTAGC | 1 cut(s) | 581 |
| Bpu10I | CCTNAGC | 1 cut(s) | 685 |
| BpuEI | CTTGAG | 1 cut(s) | 200 |
| BpuMI | CCSGG | 1 cut(s) | 53 |
| BsaAI | YACGTR | 1 cut(s) | 506 |
| BsaBI | GATNNNNATC | 1 cut(s) | 518 |
| BsaHI | GRCGYC | 2 cut(s) | 5, 782 |
| BsaI | GGTCTC | 1 cut(s) | 262 |
| BsaWI | WCCGGW | 1 cut(s) | 76 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 723, 753 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 401 |
| Bse118I | RCCGGY | 1 cut(s) | 845 |
| Bse1I | ACTGG | 2 cut(s) | 379, 430 |
| Bse3DI | GCAATG | 1 cut(s) | 112 |
| Bse8I | GATNNNNATC | 1 cut(s) | 518 |
| BseBI | CCWGG | 1 cut(s) | 500 |
| BseGI | GGATG | 1 cut(s) | 99 |
| BseJI | GATNNNNATC | 1 cut(s) | 518 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 401 |
| BseMI | GCAATG | 1 cut(s) | 112 |
| BseMII | CTCAG | 2 cut(s) | 506, 699 |
| BseNI | ACTGG | 2 cut(s) | 379, 430 |
| BseRI | GAGGAG | 4 cut(s) | 384, 450, 632, 744 |
| BseXI | GCAGC | 5 cut(s) | 325, 376, 647, 809, 812 |
| BsgI | GTGCAG | 2 cut(s) | 324, 823 |
| BshFI | GGCC | 2 cut(s) | 51, 429 |
| BshNI | GGYRCC | 2 cut(s) | 781, 848 |
| BsiHKAI | GWGCWC | 1 cut(s) | 744 |
| BsiSI | CCGG | 3 cut(s) | 52, 77, 846 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 401 |
| BsmAI | GTCTC | 3 cut(s) | 12, 190, 262 |
| BsmBI | CGTCTC | 1 cut(s) | 12 |
| BsmI | GAATGC | 1 cut(s) | 563 |
| BsnI | GGCC | 2 cut(s) | 51, 429 |
| Bso31I | GGTCTC | 1 cut(s) | 262 |
| Bsp1286I | GDGCHC | 1 cut(s) | 744 |
| Bsp143I | GATC | 3 cut(s) | 417, 468, 654 |
| BspACI | CCGC | 3 cut(s) | 103, 251, 843 |
| BspANI | GGCC | 2 cut(s) | 51, 429 |
| BspCNI | CTCAG | 2 cut(s) | 505, 698 |
| BspLI | GGNNCC | 5 cut(s) | 26, 127, 783, 794, 850 |
| BspOI | GCTAGC | 1 cut(s) | 581 |
| BspT107I | GGYRCC | 2 cut(s) | 781, 848 |
| BspTI | CTTAAG | 1 cut(s) | 677 |
| BspTNI | GGTCTC | 1 cut(s) | 262 |
| BsrDI | GCAATG | 1 cut(s) | 112 |
| BsrFI | RCCGGY | 1 cut(s) | 845 |
| BsrI | ACTGG | 2 cut(s) | 379, 430 |
| BssAI | RCCGGY | 1 cut(s) | 845 |
| BssMI | GATC | 3 cut(s) | 417, 468, 654 |
| BssNI | GRCGYC | 2 cut(s) | 5, 782 |
| Bst2UI | CCWGG | 1 cut(s) | 500 |
| Bst4CI | ACNGT | 1 cut(s) | 643 |
| Bst6I | CTCTTC | 2 cut(s) | 756, 770 |
| BstACI | GRCGYC | 2 cut(s) | 5, 782 |
| BstAFI | CTTAAG | 1 cut(s) | 677 |
| BstBAI | YACGTR | 1 cut(s) | 506 |
| BstC8I | GCNNGC | 5 cut(s) | 477, 579, 629, 633, 847 |
| BstDEI | CTNAG | 2 cut(s) | 492, 685 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 399 |
| BstF5I | GGATG | 1 cut(s) | 99 |
| BstH2I | RGCGCY | 2 cut(s) | 685, 785 |
| BstHHI | GCGC | 3 cut(s) | 481, 684, 784 |
| BstKTI | GATC | 3 cut(s) | 420, 471, 657 |
| BstMAI | GTCTC | 3 cut(s) | 12, 190, 262 |
| BstMBI | GATC | 3 cut(s) | 417, 468, 654 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 57, 790, 831, 846 |
| BstNI | CCWGG | 1 cut(s) | 500 |
| BstSCI | CCNGG | 2 cut(s) | 51, 498 |
| BstSFI | CTRYAG | 2 cut(s) | 351, 698 |
| BstSNI | TACGTA | 1 cut(s) | 506 |
| BstV1I | GCAGC | 5 cut(s) | 325, 376, 647, 809, 812 |
| BsuRI | GGCC | 2 cut(s) | 51, 429 |
| BtsCI | GGATG | 1 cut(s) | 99 |
| BtsIMutI | CAGTG | 1 cut(s) | 650 |
| Cac8I | GCNNGC | 5 cut(s) | 477, 579, 629, 633, 847 |
| CaiI | CAGNNNCTG | 1 cut(s) | 641 |
| CfoI | GCGC | 3 cut(s) | 481, 684, 784 |
| Cfr10I | RCCGGY | 1 cut(s) | 845 |
| Cfr13I | GGNCC | 2 cut(s) | 377, 496 |
| CseI | GACGC | 1 cut(s) | 823 |
| CsiI | ACCWGGT | 1 cut(s) | 498 |
| Csp6I | GTAC | 4 cut(s) | 42, 56, 503, 734 |
| CviAII | CATG | 3 cut(s) | 61, 182, 191 |
| CviQI | GTAC | 4 cut(s) | 42, 56, 503, 734 |
| DdeI | CTNAG | 2 cut(s) | 492, 685 |
| DinI | GGCGCC | 1 cut(s) | 783 |
| DpnI | GATC | 3 cut(s) | 419, 470, 656 |
| DpnII | GATC | 3 cut(s) | 417, 468, 654 |
| EaeI | YGGCCR | 2 cut(s) | 49, 427 |
| Eam1104I | CTCTTC | 2 cut(s) | 756, 770 |
| EarI | CTCTTC | 2 cut(s) | 756, 770 |
| EciI | GGCGGA | 1 cut(s) | 266 |
| Eco105I | TACGTA | 1 cut(s) | 506 |
| Eco31I | GGTCTC | 1 cut(s) | 262 |
| Eco47I | GGWCC | 2 cut(s) | 377, 496 |
| Eco47III | AGCGCT | 1 cut(s) | 683 |
| Eco57I | CTGAAG | 2 cut(s) | 684, 780 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 399 |
| EcoRII | CCWGG | 1 cut(s) | 498 |
| EgeI | GGCGCC | 1 cut(s) | 783 |
| EheI | GGCGCC | 1 cut(s) | 783 |
| Esp3I | CGTCTC | 1 cut(s) | 12 |
| FaeI | CATG | 3 cut(s) | 64, 185, 194 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 708, 740 |
| FatI | CATG | 3 cut(s) | 60, 181, 190 |
| Fnu4HI | GCNGC | 5 cut(s) | 339, 390, 636, 823, 826 |
| FokI | GGATG | 1 cut(s) | 86 |
| Fsp4HI | GCNGC | 5 cut(s) | 339, 390, 636, 823, 826 |
| FspBI | CTAG | 3 cut(s) | 245, 401, 578 |
| GlaI | GCGC | 3 cut(s) | 480, 683, 783 |
| GluI | GCNGC | 5 cut(s) | 339, 390, 636, 823, 826 |
| HaeII | RGCGCY | 2 cut(s) | 685, 785 |
| HaeIII | GGCC | 2 cut(s) | 51, 429 |
| HapII | CCGG | 3 cut(s) | 52, 77, 846 |
| HgaI | GACGC | 1 cut(s) | 823 |
| HhaI | GCGC | 3 cut(s) | 481, 684, 784 |
| Hin1I | GRCGYC | 2 cut(s) | 5, 782 |
| Hin1II | CATG | 3 cut(s) | 64, 185, 194 |
| Hin6I | GCGC | 3 cut(s) | 479, 682, 782 |
| HinP1I | GCGC | 3 cut(s) | 479, 682, 782 |
| HinfI | GANTC | 3 cut(s) | 448, 514, 620 |
| HpaII | CCGG | 3 cut(s) | 52, 77, 846 |
| HphI | GGTGA | 4 cut(s) | 308, 566, 699, 736 |
| Hpy166II | GTNNAC | 2 cut(s) | 435, 509 |
| Hpy188I | TCNGA | 4 cut(s) | 14, 29, 417, 857 |
| Hpy188III | TCNNGA | 4 cut(s) | 134, 217, 494, 687 |
| Hpy8I | GTNNAC | 2 cut(s) | 435, 509 |
| HpyAV | CCTTC | 4 cut(s) | 158, 217, 372, 659 |
| HpyCH4III | ACNGT | 1 cut(s) | 643 |
| HpyCH4IV | ACGT | 1 cut(s) | 505 |
| HpyCH4V | TGCA | 6 cut(s) | 291, 341, 561, 752, 828, 840 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 57, 790, 831, 846 |
| HpyF3I | CTNAG | 2 cut(s) | 492, 685 |
| HpySE526I | ACGT | 1 cut(s) | 505 |
| Hsp92I | GRCGYC | 2 cut(s) | 5, 782 |
| Hsp92II | CATG | 3 cut(s) | 64, 185, 194 |
| HspAI | GCGC | 3 cut(s) | 479, 682, 782 |
| KasI | GGCGCC | 1 cut(s) | 781 |
| KroI | GCCGGC | 1 cut(s) | 845 |
| KroNI | GCCGGC | 1 cut(s) | 847 |
| Kzo9I | GATC | 3 cut(s) | 417, 468, 654 |
| LmnI | GCTCC | 3 cut(s) | 397, 574, 798 |
| Lsp1109I | GCAGC | 5 cut(s) | 325, 376, 647, 809, 812 |
| LweI | GCATC | 1 cut(s) | 739 |
| MabI | ACCWGGT | 1 cut(s) | 498 |
| MaeI | CTAG | 3 cut(s) | 245, 401, 578 |
| MaeII | ACGT | 1 cut(s) | 505 |
| MaeIII | GTNAC | 1 cut(s) | 563 |
| MalI | GATC | 3 cut(s) | 419, 470, 656 |
| MboI | GATC | 3 cut(s) | 417, 468, 654 |
| MboII | GAAGA | 6 cut(s) | 105, 181, 357, 773, 778, 787 |
| MhlI | GDGCHC | 1 cut(s) | 744 |
| MlsI | TGGCCA | 1 cut(s) | 429 |
| MluCI | AATT | 1 cut(s) | 37 |
| MluNI | TGGCCA | 1 cut(s) | 429 |
| Mly113I | GGCGCC | 1 cut(s) | 782 |
| MlyI | GAGTC | 1 cut(s) | 629 |
| Mox20I | TGGCCA | 1 cut(s) | 429 |
| MroNI | GCCGGC | 1 cut(s) | 845 |
| MscI | TGGCCA | 1 cut(s) | 429 |
| MseI | TTAA | 2 cut(s) | 228, 678 |
| Msp20I | TGGCCA | 1 cut(s) | 429 |
| MspCI | CTTAAG | 1 cut(s) | 677 |
| MspI | CCGG | 3 cut(s) | 52, 77, 846 |
| MspR9I | CCNGG | 2 cut(s) | 53, 500 |
| Mva1269I | GAATGC | 1 cut(s) | 563 |
| MvaI | CCWGG | 1 cut(s) | 500 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 57, 790, 831, 846 |
| NaeI | GCCGGC | 1 cut(s) | 847 |
| NarI | GGCGCC | 1 cut(s) | 782 |
| NciI | CCSGG | 1 cut(s) | 53 |
| NdeII | GATC | 3 cut(s) | 417, 468, 654 |
| NgoMIV | GCCGGC | 1 cut(s) | 845 |
| NheI | GCTAGC | 1 cut(s) | 577 |
| NlaIII | CATG | 3 cut(s) | 64, 185, 194 |
| NlaIV | GGNNCC | 5 cut(s) | 26, 127, 783, 794, 850 |
| PctI | GAATGC | 1 cut(s) | 563 |
| PdiI | GCCGGC | 1 cut(s) | 847 |
| PfeI | GAWTC | 2 cut(s) | 448, 514 |
| PkrI | GCNGC | 5 cut(s) | 340, 391, 637, 824, 827 |
| PleI | GAGTC | 1 cut(s) | 628 |
| PluTI | GGCGCC | 1 cut(s) | 785 |
| PpsI | GAGTC | 1 cut(s) | 628 |
| Ppu21I | YACGTR | 1 cut(s) | 506 |
| Psp6I | CCWGG | 1 cut(s) | 498 |
| PspGI | CCWGG | 1 cut(s) | 498 |
| PspN4I | GGNNCC | 5 cut(s) | 26, 127, 783, 794, 850 |
| PspPI | GGNCC | 2 cut(s) | 377, 496 |
| PstNI | CAGNNNCTG | 1 cut(s) | 641 |
| RsaI | GTAC | 4 cut(s) | 43, 57, 504, 735 |
| RsaNI | GTAC | 4 cut(s) | 42, 56, 503, 734 |
| SaqAI | TTAA | 2 cut(s) | 228, 678 |
| SatI | GCNGC | 5 cut(s) | 339, 390, 636, 823, 826 |
| Sau3AI | GATC | 3 cut(s) | 417, 468, 654 |
| Sau96I | GGNCC | 2 cut(s) | 377, 496 |
| ScaI | AGTACT | 1 cut(s) | 735 |
| SchI | GAGTC | 1 cut(s) | 629 |
| ScrFI | CCNGG | 2 cut(s) | 53, 500 |
| SduI | GDGCHC | 1 cut(s) | 744 |
| SexAI | ACCWGGT | 1 cut(s) | 498 |
| SfaNI | GCATC | 1 cut(s) | 739 |
| SfcI | CTRYAG | 2 cut(s) | 351, 698 |
| SfoI | GGCGCC | 1 cut(s) | 783 |
| SinI | GGWCC | 2 cut(s) | 377, 496 |
| SmlI | CTYRAG | 2 cut(s) | 215, 677 |
| SmoI | CTYRAG | 2 cut(s) | 215, 677 |
| SnaBI | TACGTA | 1 cut(s) | 506 |
| Sse9I | AATT | 1 cut(s) | 37 |
| SsiI | CCGC | 3 cut(s) | 103, 251, 843 |
| SspDI | GGCGCC | 1 cut(s) | 781 |
| SspMI | CTAG | 3 cut(s) | 245, 401, 578 |
| StyD4I | CCNGG | 2 cut(s) | 51, 498 |
| TaaI | ACNGT | 1 cut(s) | 643 |
| TaiI | ACGT | 1 cut(s) | 508 |
| TaqI | TCGA | 2 cut(s) | 91, 234 |
| TaqII | GACCGA | 1 cut(s) | 394 |
| TasI | AATT | 1 cut(s) | 37 |
| TatI | WGTACW | 2 cut(s) | 41, 733 |
| TfiI | GAWTC | 2 cut(s) | 448, 514 |
| Tru1I | TTAA | 2 cut(s) | 228, 678 |
| Tru9I | TTAA | 2 cut(s) | 228, 678 |
| TscAI | CASTG | 1 cut(s) | 657 |
| TseI | GCWGC | 5 cut(s) | 338, 389, 635, 822, 825 |
| TspDTI | ATGAA | 5 cut(s) | 99, 170, 177, 199, 285 |
| TspRI | CASTG | 1 cut(s) | 657 |
| Vha464I | CTTAAG | 1 cut(s) | 677 |
| VpaK11BI | GGWCC | 2 cut(s) | 377, 496 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 399 |
| XspI | CTAG | 3 cut(s) | 245, 401, 578 |
| ZrmI | AGTACT | 1 cut(s) | 735 |