Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 170 |
| Acc36I | ACCTGC | 1 cut(s) | 170 |
| AclI | AACGTT | 1 cut(s) | 404 |
| AclWI | GGATC | 1 cut(s) | 165 |
| AcsI | RAATTY | 1 cut(s) | 412 |
| AfaI | GTAC | 1 cut(s) | 240 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 66, 97 |
| AgsI | TTSAA | 5 cut(s) | 37, 80, 110, 119, 366 |
| AjnI | CCWGG | 1 cut(s) | 253 |
| AluBI | AGCT | 1 cut(s) | 319 |
| AluI | AGCT | 1 cut(s) | 319 |
| Alw26I | GTCTC | 1 cut(s) | 207 |
| AlwI | GGATC | 1 cut(s) | 165 |
| AoxI | GGCC | 3 cut(s) | 146, 218, 249 |
| ApeKI | GCWGC | 1 cut(s) | 125 |
| ApoI | RAATTY | 1 cut(s) | 412 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 84 |
| AspS9I | GGNCC | 4 cut(s) | 70, 147, 219, 250 |
| AsuHPI | GGTGA | 1 cut(s) | 194 |
| AvaII | GGWCC | 1 cut(s) | 70 |
| BauI | CACGAG | 1 cut(s) | 204 |
| BbvI | GCAGC | 1 cut(s) | 112 |
| BccI | CCATC | 3 cut(s) | 14, 329, 391 |
| BciT130I | CCWGG | 1 cut(s) | 255 |
| BciVI | GTATCC | 1 cut(s) | 367 |
| BcoDI | GTCTC | 1 cut(s) | 207 |
| BfaI | CTAG | 1 cut(s) | 442 |
| BfmI | CTRYAG | 1 cut(s) | 177 |
| BfuAI | ACCTGC | 1 cut(s) | 170 |
| BfuI | GTATCC | 1 cut(s) | 367 |
| BisI | GCNGC | 1 cut(s) | 126 |
| BlpI | GCTNAGC | 1 cut(s) | 25 |
| BlsI | GCNGC | 1 cut(s) | 127 |
| Bme1390I | CCNGG | 1 cut(s) | 255 |
| Bme18I | GGWCC | 1 cut(s) | 70 |
| BmgT120I | GGNCC | 4 cut(s) | 70, 147, 219, 250 |
| BmiI | GGNNCC | 2 cut(s) | 71, 252 |
| BmrFI | CCNGG | 1 cut(s) | 255 |
| BmsI | GCATC | 1 cut(s) | 112 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 25 |
| BsaJI | CCNNGG | 1 cut(s) | 253 |
| BsaWI | WCCGGW | 1 cut(s) | 393 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 66, 97 |
| Bse1I | ACTGG | 1 cut(s) | 252 |
| BseBI | CCWGG | 1 cut(s) | 255 |
| BseDI | CCNNGG | 1 cut(s) | 253 |
| BseGI | GGATG | 1 cut(s) | 402 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 66, 97 |
| BseNI | ACTGG | 1 cut(s) | 252 |
| BseRI | GAGGAG | 1 cut(s) | 158 |
| BseXI | GCAGC | 1 cut(s) | 112 |
| BsgI | GTGCAG | 2 cut(s) | 29, 401 |
| Bsh1285I | CGRYCG | 1 cut(s) | 132 |
| BshFI | GGCC | 3 cut(s) | 148, 220, 251 |
| BsiEI | CGRYCG | 1 cut(s) | 132 |
| BsiSI | CCGG | 1 cut(s) | 394 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 66, 97 |
| BsmAI | GTCTC | 1 cut(s) | 207 |
| BsnI | GGCC | 3 cut(s) | 148, 220, 251 |
| Bsp143I | GATC | 4 cut(s) | 46, 129, 157, 214 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 25 |
| BspANI | GGCC | 3 cut(s) | 148, 220, 251 |
| BspLI | GGNNCC | 2 cut(s) | 71, 252 |
| BspMAI | CTGCAG | 1 cut(s) | 181 |
| BspMI | ACCTGC | 1 cut(s) | 170 |
| BspPI | GGATC | 1 cut(s) | 165 |
| BsrI | ACTGG | 1 cut(s) | 252 |
| BssECI | CCNNGG | 1 cut(s) | 253 |
| BssMI | GATC | 4 cut(s) | 46, 129, 157, 214 |
| BssSI | CACGAG | 1 cut(s) | 204 |
| Bst2BI | CACGAG | 1 cut(s) | 204 |
| Bst2UI | CCWGG | 1 cut(s) | 255 |
| Bst4CI | ACNGT | 1 cut(s) | 379 |
| BstC8I | GCNNGC | 1 cut(s) | 317 |
| BstDEI | CTNAG | 1 cut(s) | 25 |
| BstF5I | GGATG | 1 cut(s) | 402 |
| BstKTI | GATC | 4 cut(s) | 49, 132, 160, 217 |
| BstMAI | GTCTC | 1 cut(s) | 207 |
| BstMBI | GATC | 4 cut(s) | 46, 129, 157, 214 |
| BstMCI | CGRYCG | 1 cut(s) | 132 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 416 |
| BstNI | CCWGG | 1 cut(s) | 255 |
| BstSCI | CCNGG | 1 cut(s) | 253 |
| BstSFI | CTRYAG | 1 cut(s) | 177 |
| BstV1I | GCAGC | 1 cut(s) | 112 |
| BstX2I | RGATCY | 1 cut(s) | 157 |
| BstYI | RGATCY | 1 cut(s) | 157 |
| BsuI | GTATCC | 1 cut(s) | 367 |
| BsuRI | GGCC | 3 cut(s) | 148, 220, 251 |
| BtsCI | GGATG | 1 cut(s) | 402 |
| BtsIMutI | CAGTG | 1 cut(s) | 384 |
| BveI | ACCTGC | 1 cut(s) | 170 |
| Cac8I | GCNNGC | 1 cut(s) | 317 |
| Cfr13I | GGNCC | 4 cut(s) | 70, 147, 219, 250 |
| Csp6I | GTAC | 1 cut(s) | 239 |
| CviJI | RGCY | 7 cut(s) | 24, 29, 148, 220, 251, 319, 441 |
| CviKI_1 | RGCY | 7 cut(s) | 24, 29, 148, 220, 251, 319, 441 |
| CviQI | GTAC | 1 cut(s) | 239 |
| DdeI | CTNAG | 1 cut(s) | 25 |
| DpnI | GATC | 4 cut(s) | 48, 131, 159, 216 |
| DpnII | GATC | 4 cut(s) | 46, 129, 157, 214 |
| Eco47I | GGWCC | 1 cut(s) | 70 |
| EcoO109I | RGGNCCY | 1 cut(s) | 147 |
| EcoRII | CCWGG | 1 cut(s) | 253 |
| FaiI | YATR | 4 cut(s) | 18, 260, 285, 302 |
| Fnu4HI | GCNGC | 1 cut(s) | 126 |
| FokI | GGATG | 1 cut(s) | 409 |
| Fsp4HI | GCNGC | 1 cut(s) | 126 |
| FspBI | CTAG | 1 cut(s) | 442 |
| GluI | GCNGC | 1 cut(s) | 126 |
| HaeIII | GGCC | 3 cut(s) | 148, 220, 251 |
| HapII | CCGG | 1 cut(s) | 394 |
| HpaII | CCGG | 1 cut(s) | 394 |
| HphI | GGTGA | 1 cut(s) | 194 |
| Hpy188I | TCNGA | 3 cut(s) | 51, 74, 373 |
| Hpy188III | TCNNGA | 2 cut(s) | 133, 232 |
| HpyAV | CCTTC | 4 cut(s) | 70, 229, 232, 379 |
| HpyCH4III | ACNGT | 1 cut(s) | 379 |
| HpyCH4IV | ACGT | 1 cut(s) | 404 |
| HpyCH4V | TGCA | 6 cut(s) | 10, 179, 209, 315, 345, 382 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 416 |
| HpyF3I | CTNAG | 1 cut(s) | 25 |
| HpySE526I | ACGT | 1 cut(s) | 404 |
| Kzo9I | GATC | 4 cut(s) | 46, 129, 157, 214 |
| LpnPI | CCDG | 5 cut(s) | 165, 233, 240, 267, 407 |
| Lsp1109I | GCAGC | 1 cut(s) | 112 |
| LweI | GCATC | 1 cut(s) | 112 |
| MaeI | CTAG | 1 cut(s) | 442 |
| MaeII | ACGT | 1 cut(s) | 404 |
| MalI | GATC | 4 cut(s) | 48, 131, 159, 216 |
| MboI | GATC | 4 cut(s) | 46, 129, 157, 214 |
| MboII | GAAGA | 3 cut(s) | 131, 220, 271 |
| MflI | RGATCY | 1 cut(s) | 157 |
| MluCI | AATT | 5 cut(s) | 31, 75, 95, 347, 412 |
| MmeI | TCCRAC | 1 cut(s) | 351 |
| MnlI | CCTC | 2 cut(s) | 94, 179 |
| MroXI | GAANNNNTTC | 1 cut(s) | 84 |
| MseI | TTAA | 1 cut(s) | 350 |
| MslI | CAYNNNNRTG | 1 cut(s) | 333 |
| MspI | CCGG | 1 cut(s) | 394 |
| MspR9I | CCNGG | 1 cut(s) | 255 |
| MvaI | CCWGG | 1 cut(s) | 255 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 416 |
| NdeII | GATC | 4 cut(s) | 46, 129, 157, 214 |
| NlaIV | GGNNCC | 2 cut(s) | 71, 252 |
| PaqCI | CACCTGC | 1 cut(s) | 170 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 202 |
| PdmI | GAANNNNTTC | 1 cut(s) | 84 |
| PkrI | GCNGC | 1 cut(s) | 127 |
| Ple19I | CGATCG | 1 cut(s) | 132 |
| Psp1406I | AACGTT | 1 cut(s) | 404 |
| Psp6I | CCWGG | 1 cut(s) | 253 |
| PspGI | CCWGG | 1 cut(s) | 253 |
| PspN4I | GGNNCC | 2 cut(s) | 71, 252 |
| PspPI | GGNCC | 4 cut(s) | 70, 147, 219, 250 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 255, 287 |
| PstI | CTGCAG | 1 cut(s) | 181 |
| PsuI | RGATCY | 1 cut(s) | 157 |
| PvuI | CGATCG | 1 cut(s) | 132 |
| RsaI | GTAC | 1 cut(s) | 240 |
| RsaNI | GTAC | 1 cut(s) | 239 |
| RseI | CAYNNNNRTG | 1 cut(s) | 333 |
| SaqAI | TTAA | 1 cut(s) | 350 |
| SatI | GCNGC | 1 cut(s) | 126 |
| Sau3AI | GATC | 4 cut(s) | 46, 129, 157, 214 |
| Sau96I | GGNCC | 4 cut(s) | 70, 147, 219, 250 |
| ScrFI | CCNGG | 1 cut(s) | 255 |
| SetI | ASST | 5 cut(s) | 105, 184, 240, 321, 407 |
| SfaNI | GCATC | 1 cut(s) | 112 |
| SfcI | CTRYAG | 1 cut(s) | 177 |
| SinI | GGWCC | 1 cut(s) | 70 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 333 |
| Sse9I | AATT | 5 cut(s) | 31, 75, 95, 347, 412 |
| SspMI | CTAG | 1 cut(s) | 442 |
| StyD4I | CCNGG | 1 cut(s) | 253 |
| TaaI | ACNGT | 1 cut(s) | 379 |
| TaiI | ACGT | 1 cut(s) | 407 |
| TaqI | TCGA | 1 cut(s) | 231 |
| TasI | AATT | 5 cut(s) | 31, 75, 95, 347, 412 |
| Tru1I | TTAA | 1 cut(s) | 350 |
| Tru9I | TTAA | 1 cut(s) | 350 |
| TscAI | CASTG | 1 cut(s) | 384 |
| TseI | GCWGC | 1 cut(s) | 125 |
| TspDTI | ATGAA | 3 cut(s) | 214, 300, 317 |
| TspRI | CASTG | 1 cut(s) | 384 |
| VpaK11BI | GGWCC | 1 cut(s) | 70 |
| XapI | RAATTY | 1 cut(s) | 412 |
| XmnI | GAANNNNTTC | 1 cut(s) | 84 |
| XspI | CTAG | 1 cut(s) | 442 |