Domain of unknown function (DUF4283)
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 1154 |
| Acc65I | GGTACC | 1 cut(s) | 649 |
| AccB1I | GGYRCC | 2 cut(s) | 248, 649 |
| AccI | GTMKAC | 1 cut(s) | 425 |
| AccIII | TCCGGA | 1 cut(s) | 841 |
| AciI | CCGC | 2 cut(s) | 172, 679 |
| AclWI | GGATC | 4 cut(s) | 279, 656, 1210, 1223 |
| AcoI | YGGCCR | 2 cut(s) | 3, 75 |
| AcsI | RAATTY | 3 cut(s) | 496, 557, 794 |
| AcuI | CTGAAG | 1 cut(s) | 489 |
| AcyI | GRCGYC | 2 cut(s) | 249, 1116 |
| AfaI | GTAC | 6 cut(s) | 106, 297, 409, 628, 651, 741 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 612, 867, 868 |
| AflIII | ACRYGT | 1 cut(s) | 883 |
| AgsI | TTSAA | 1 cut(s) | 193 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 583 |
| AjiI | CACGTC | 2 cut(s) | 166, 553 |
| AjnI | CCWGG | 1 cut(s) | 203 |
| AluBI | AGCT | 3 cut(s) | 30, 758, 1201 |
| AluI | AGCT | 3 cut(s) | 30, 758, 1201 |
| Alw21I | GWGCWC | 1 cut(s) | 459 |
| Alw26I | GTCTC | 3 cut(s) | 320, 833, 884 |
| AlwI | GGATC | 4 cut(s) | 279, 656, 1210, 1223 |
| Aor13HI | TCCGGA | 1 cut(s) | 841 |
| AoxI | GGCC | 7 cut(s) | 3, 75, 566, 907, 911, 990, 1094 |
| ApeKI | GCWGC | 2 cut(s) | 100, 1190 |
| ApoI | RAATTY | 3 cut(s) | 496, 557, 794 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 542, 574 |
| Asp718I | GGTACC | 1 cut(s) | 649 |
| AspA2I | CCTAGG | 1 cut(s) | 569 |
| AspLEI | GCGC | 3 cut(s) | 49, 171, 251 |
| AspS9I | GGNCC | 5 cut(s) | 92, 907, 990, 1094, 1166 |
| AsuC2I | CCSGG | 1 cut(s) | 218 |
| AvaII | GGWCC | 2 cut(s) | 92, 1166 |
| AvrII | CCTAGG | 1 cut(s) | 569 |
| AxyI | CCTNAGG | 2 cut(s) | 432, 1170 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 627, 660 |
| BalI | TGGCCA | 2 cut(s) | 5, 77 |
| BamHI | GGATCC | 1 cut(s) | 1215 |
| BanI | GGYRCC | 2 cut(s) | 248, 649 |
| BbsI | GAAGAC | 1 cut(s) | 504 |
| Bbv12I | GWGCWC | 1 cut(s) | 459 |
| BbvI | GCAGC | 2 cut(s) | 112, 1177 |
| BccI | CCATC | 7 cut(s) | 239, 529, 839, 847, 977, 1076, 1127 |
| BceAI | ACGGC | 3 cut(s) | 39, 590, 1081 |
| BciT130I | CCWGG | 1 cut(s) | 205 |
| BciVI | GTATCC | 1 cut(s) | 868 |
| BcnI | CCSGG | 1 cut(s) | 218 |
| BcoDI | GTCTC | 3 cut(s) | 320, 833, 884 |
| BfaI | CTAG | 4 cut(s) | 441, 570, 612, 1225 |
| BfmI | CTRYAG | 1 cut(s) | 233 |
| BfoI | RGCGCY | 1 cut(s) | 252 |
| BfuAI | ACCTGC | 1 cut(s) | 1154 |
| BfuI | GTATCC | 1 cut(s) | 868 |
| BglII | AGATCT | 1 cut(s) | 1221 |
| BisI | GCNGC | 3 cut(s) | 101, 172, 1191 |
| BlnI | CCTAGG | 1 cut(s) | 569 |
| BlsI | GCNGC | 3 cut(s) | 102, 173, 1192 |
| BmcAI | AGTACT | 1 cut(s) | 741 |
| Bme1390I | CCNGG | 2 cut(s) | 205, 218 |
| Bme18I | GGWCC | 2 cut(s) | 92, 1166 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 583 |
| BmgBI | CACGTC | 2 cut(s) | 166, 553 |
| BmgT120I | GGNCC | 5 cut(s) | 92, 907, 990, 1094, 1166 |
| BmiI | GGNNCC | 8 cut(s) | 202, 250, 479, 651, 908, 922, 972, 1217 |
| BmrFI | CCNGG | 2 cut(s) | 205, 218 |
| BmrI | ACTGGG | 1 cut(s) | 876 |
| BmsI | GCATC | 6 cut(s) | 87, 362, 592, 949, 1187, 1218 |
| BmuI | ACTGGG | 1 cut(s) | 876 |
| BpiI | GAAGAC | 1 cut(s) | 504 |
| BpmI | CTGGAG | 3 cut(s) | 443, 752, 1030 |
| BpuEI | CTTGAG | 2 cut(s) | 96, 143 |
| BpuMI | CCSGG | 1 cut(s) | 218 |
| Bsa29I | ATCGAT | 1 cut(s) | 281 |
| BsaAI | YACGTR | 1 cut(s) | 299 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1220 |
| BsaHI | GRCGYC | 2 cut(s) | 249, 1116 |
| BsaI | GGTCTC | 1 cut(s) | 833 |
| BsaJI | CCNNGG | 1 cut(s) | 569 |
| BsaWI | WCCGGW | 2 cut(s) | 790, 841 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 612, 867, 868 |
| Bse118I | RCCGGY | 1 cut(s) | 909 |
| Bse1I | ACTGG | 5 cut(s) | 460, 653, 689, 747, 871 |
| Bse21I | CCTNAGG | 2 cut(s) | 432, 1170 |
| Bse3DI | GCAATG | 1 cut(s) | 1158 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1220 |
| BseAI | TCCGGA | 1 cut(s) | 841 |
| BseBI | CCWGG | 1 cut(s) | 205 |
| BseCI | ATCGAT | 1 cut(s) | 281 |
| BseDI | CCNNGG | 1 cut(s) | 569 |
| BseGI | GGATG | 6 cut(s) | 388, 607, 664, 850, 858, 1178 |
| BseJI | GATNNNNATC | 1 cut(s) | 1220 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 612, 867, 868 |
| BseMI | GCAATG | 1 cut(s) | 1158 |
| BseMII | CTCAG | 3 cut(s) | 446, 992, 1184 |
| BseNI | ACTGG | 5 cut(s) | 460, 653, 689, 747, 871 |
| BseXI | GCAGC | 2 cut(s) | 112, 1177 |
| BseYI | CCCAGC | 3 cut(s) | 124, 362, 1091 |
| BsgI | GTGCAG | 1 cut(s) | 402 |
| Bsh1285I | CGRYCG | 1 cut(s) | 539 |
| BshFI | GGCC | 7 cut(s) | 5, 77, 568, 909, 913, 992, 1096 |
| BshNI | GGYRCC | 2 cut(s) | 248, 649 |
| BshVI | ATCGAT | 1 cut(s) | 281 |
| BsiEI | CGRYCG | 1 cut(s) | 539 |
| BsiHKAI | GWGCWC | 1 cut(s) | 459 |
| BsiSI | CCGG | 4 cut(s) | 217, 791, 842, 910 |
| BslFI | GGGAC | 4 cut(s) | 71, 141, 691, 695 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 612, 867, 868 |
| BsmAI | GTCTC | 3 cut(s) | 320, 833, 884 |
| BsmFI | GGGAC | 4 cut(s) | 71, 141, 691, 695 |
| BsmI | GAATGC | 1 cut(s) | 1151 |
| BsnI | GGCC | 7 cut(s) | 5, 77, 568, 909, 913, 992, 1096 |
| Bso31I | GGTCTC | 1 cut(s) | 833 |
| Bsp1286I | GDGCHC | 1 cut(s) | 459 |
| Bsp13I | TCCGGA | 1 cut(s) | 841 |
| Bsp143I | GATC | 6 cut(s) | 271, 282, 661, 1120, 1215, 1221 |
| BspACI | CCGC | 2 cut(s) | 172, 679 |
| BspANI | GGCC | 7 cut(s) | 5, 77, 568, 909, 913, 992, 1096 |
| BspCNI | CTCAG | 3 cut(s) | 445, 993, 1183 |
| BspDI | ATCGAT | 1 cut(s) | 281 |
| BspEI | TCCGGA | 1 cut(s) | 841 |
| BspLI | GGNNCC | 8 cut(s) | 202, 250, 479, 651, 908, 922, 972, 1217 |
| BspMAI | CTGCAG | 1 cut(s) | 237 |
| BspMI | ACCTGC | 1 cut(s) | 1154 |
| BspPI | GGATC | 4 cut(s) | 279, 656, 1210, 1223 |
| BspT107I | GGYRCC | 2 cut(s) | 248, 649 |
| BspTNI | GGTCTC | 1 cut(s) | 833 |
| BsrDI | GCAATG | 1 cut(s) | 1158 |
| BsrFI | RCCGGY | 1 cut(s) | 909 |
| BsrI | ACTGG | 5 cut(s) | 460, 653, 689, 747, 871 |
| BssAI | RCCGGY | 1 cut(s) | 909 |
| BssECI | CCNNGG | 1 cut(s) | 569 |
| BssMI | GATC | 6 cut(s) | 271, 282, 661, 1120, 1215, 1221 |
| BssNI | GRCGYC | 2 cut(s) | 249, 1116 |
| BssT1I | CCWWGG | 1 cut(s) | 569 |
| Bst2UI | CCWGG | 1 cut(s) | 205 |
| Bst4CI | ACNGT | 3 cut(s) | 151, 423, 537 |
| BstACI | GRCGYC | 2 cut(s) | 249, 1116 |
| BstBAI | YACGTR | 1 cut(s) | 299 |
| BstC8I | GCNNGC | 5 cut(s) | 28, 51, 756, 911, 1053 |
| BstDEI | CTNAG | 6 cut(s) | 330, 432, 774, 1001, 1067, 1170 |
| BstF5I | GGATG | 6 cut(s) | 388, 607, 664, 850, 858, 1178 |
| BstH2I | RGCGCY | 1 cut(s) | 252 |
| BstHHI | GCGC | 3 cut(s) | 49, 171, 251 |
| BstKTI | GATC | 6 cut(s) | 274, 285, 664, 1123, 1218, 1224 |
| BstMAI | GTCTC | 3 cut(s) | 320, 833, 884 |
| BstMBI | GATC | 6 cut(s) | 271, 282, 661, 1120, 1215, 1221 |
| BstMCI | CGRYCG | 1 cut(s) | 539 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 32, 359, 676 |
| BstNI | CCWGG | 1 cut(s) | 205 |
| BstNSI | RCATGY | 1 cut(s) | 887 |
| BstSCI | CCNGG | 2 cut(s) | 203, 216 |
| BstSFI | CTRYAG | 1 cut(s) | 233 |
| BstSNI | TACGTA | 1 cut(s) | 299 |
| BstV1I | GCAGC | 2 cut(s) | 112, 1177 |
| BstV2I | GAAGAC | 1 cut(s) | 504 |
| BstX2I | RGATCY | 3 cut(s) | 271, 1215, 1221 |
| BstXI | CCANNNNNNTGG | 3 cut(s) | 151, 488, 1205 |
| BstYI | RGATCY | 3 cut(s) | 271, 1215, 1221 |
| Bsu15I | ATCGAT | 1 cut(s) | 281 |
| Bsu36I | CCTNAGG | 2 cut(s) | 432, 1170 |
| BsuI | GTATCC | 1 cut(s) | 868 |
| BsuRI | GGCC | 7 cut(s) | 5, 77, 568, 909, 913, 992, 1096 |
| BsuTUI | ATCGAT | 1 cut(s) | 281 |
| BtrI | CACGTC | 2 cut(s) | 166, 553 |
| BtsCI | GGATG | 6 cut(s) | 388, 607, 664, 850, 858, 1178 |
| BtsIMutI | CAGTG | 3 cut(s) | 419, 660, 1135 |
| BveI | ACCTGC | 1 cut(s) | 1154 |
| Cac8I | GCNNGC | 5 cut(s) | 28, 51, 756, 911, 1053 |
| CfoI | GCGC | 3 cut(s) | 49, 171, 251 |
| Cfr10I | RCCGGY | 1 cut(s) | 909 |
| Cfr13I | GGNCC | 5 cut(s) | 92, 907, 990, 1094, 1166 |
| ClaI | ATCGAT | 1 cut(s) | 281 |
| CseI | GACGC | 3 cut(s) | 138, 1105, 1184 |
| Csp6I | GTAC | 6 cut(s) | 105, 296, 408, 627, 650, 740 |
| CviAII | CATG | 8 cut(s) | 19, 452, 527, 667, 725, 832, 884, 1056 |
| CviQI | GTAC | 6 cut(s) | 105, 296, 408, 627, 650, 740 |
| DdeI | CTNAG | 6 cut(s) | 330, 432, 774, 1001, 1067, 1170 |
| DinI | GGCGCC | 1 cut(s) | 250 |
| DpnI | GATC | 6 cut(s) | 273, 284, 663, 1122, 1217, 1223 |
| DpnII | GATC | 6 cut(s) | 271, 282, 661, 1120, 1215, 1221 |
| DraI | TTTAAA | 1 cut(s) | 397 |
| DriI | GACNNNNNGTC | 1 cut(s) | 583 |
| EaeI | YGGCCR | 2 cut(s) | 3, 75 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 583 |
| Eco105I | TACGTA | 1 cut(s) | 299 |
| Eco130I | CCWWGG | 1 cut(s) | 569 |
| Eco147I | AGGCCT | 1 cut(s) | 568 |
| Eco31I | GGTCTC | 1 cut(s) | 833 |
| Eco47I | GGWCC | 2 cut(s) | 92, 1166 |
| Eco57I | CTGAAG | 1 cut(s) | 489 |
| Eco81I | CCTNAGG | 2 cut(s) | 432, 1170 |
| EcoO109I | RGGNCCY | 2 cut(s) | 990, 1166 |
| EcoRI | GAATTC | 1 cut(s) | 794 |
| EcoRII | CCWGG | 1 cut(s) | 203 |
| EcoT14I | CCWWGG | 1 cut(s) | 569 |
| EgeI | GGCGCC | 1 cut(s) | 250 |
| EheI | GGCGCC | 1 cut(s) | 250 |
| ErhI | CCWWGG | 1 cut(s) | 569 |
| FaeI | CATG | 8 cut(s) | 22, 455, 530, 670, 728, 835, 887, 1059 |
| FaqI | GGGAC | 4 cut(s) | 71, 141, 691, 695 |
| FatI | CATG | 8 cut(s) | 18, 451, 526, 666, 724, 831, 883, 1055 |
| FauI | CCCGC | 1 cut(s) | 672 |
| FblI | GTMKAC | 1 cut(s) | 425 |
| Fnu4HI | GCNGC | 3 cut(s) | 101, 172, 1191 |
| FokI | GGATG | 6 cut(s) | 395, 614, 671, 857, 865, 1165 |
| FseI | GGCCGGCC | 1 cut(s) | 913 |
| Fsp4HI | GCNGC | 3 cut(s) | 101, 172, 1191 |
| FspBI | CTAG | 4 cut(s) | 441, 570, 612, 1225 |
| GlaI | GCGC | 3 cut(s) | 48, 170, 250 |
| GluI | GCNGC | 3 cut(s) | 101, 172, 1191 |
| GsaI | CCCAGC | 3 cut(s) | 128, 366, 1095 |
| GsuI | CTGGAG | 3 cut(s) | 443, 752, 1030 |
| HaeII | RGCGCY | 1 cut(s) | 252 |
| HaeIII | GGCC | 7 cut(s) | 5, 77, 568, 909, 913, 992, 1096 |
| HapII | CCGG | 4 cut(s) | 217, 791, 842, 910 |
| HgaI | GACGC | 3 cut(s) | 138, 1105, 1184 |
| HhaI | GCGC | 3 cut(s) | 49, 171, 251 |
| Hin1I | GRCGYC | 2 cut(s) | 249, 1116 |
| Hin1II | CATG | 8 cut(s) | 22, 455, 530, 670, 728, 835, 887, 1059 |
| Hin6I | GCGC | 3 cut(s) | 47, 169, 249 |
| HinP1I | GCGC | 3 cut(s) | 47, 169, 249 |
| HincII | GTYRAC | 1 cut(s) | 426 |
| HindII | GTYRAC | 1 cut(s) | 426 |
| HindIII | AAGCTT | 1 cut(s) | 756 |
| HinfI | GANTC | 3 cut(s) | 208, 934, 1020 |
| HpaII | CCGG | 4 cut(s) | 217, 791, 842, 910 |
| Hpy166II | GTNNAC | 2 cut(s) | 408, 426 |
| Hpy188I | TCNGA | 6 cut(s) | 138, 182, 699, 958, 1002, 1102 |
| Hpy188III | TCNNGA | 6 cut(s) | 374, 731, 842, 1172, 1213, 1219 |
| Hpy8I | GTNNAC | 2 cut(s) | 408, 426 |
| Hpy99I | CGWCG | 2 cut(s) | 1115, 1121 |
| HpyAV | CCTTC | 6 cut(s) | 187, 327, 464, 568, 740, 981 |
| HpyCH4III | ACNGT | 3 cut(s) | 151, 423, 537 |
| HpyCH4IV | ACGT | 4 cut(s) | 165, 298, 552, 1033 |
| HpyCH4V | TGCA | 5 cut(s) | 89, 100, 235, 419, 1163 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 32, 359, 676 |
| HpyF3I | CTNAG | 6 cut(s) | 330, 432, 774, 1001, 1067, 1170 |
| HpySE526I | ACGT | 4 cut(s) | 165, 298, 552, 1033 |
| Hsp92I | GRCGYC | 2 cut(s) | 249, 1116 |
| Hsp92II | CATG | 8 cut(s) | 22, 455, 530, 670, 728, 835, 887, 1059 |
| HspAI | GCGC | 3 cut(s) | 47, 169, 249 |
| KasI | GGCGCC | 1 cut(s) | 248 |
| Kpn2I | TCCGGA | 1 cut(s) | 841 |
| KpnI | GGTACC | 1 cut(s) | 653 |
| KroI | GCCGGC | 1 cut(s) | 909 |
| KroNI | GCCGGC | 1 cut(s) | 911 |
| Kzo9I | GATC | 6 cut(s) | 271, 282, 661, 1120, 1215, 1221 |
| LmnI | GCTCC | 4 cut(s) | 200, 234, 462, 920 |
| Lsp1109I | GCAGC | 2 cut(s) | 112, 1177 |
| LweI | GCATC | 6 cut(s) | 87, 362, 592, 949, 1187, 1218 |
| MaeI | CTAG | 4 cut(s) | 441, 570, 612, 1225 |
| MaeII | ACGT | 4 cut(s) | 165, 298, 552, 1033 |
| MalI | GATC | 6 cut(s) | 273, 284, 663, 1122, 1217, 1223 |
| MboI | GATC | 6 cut(s) | 271, 282, 661, 1120, 1215, 1221 |
| MboII | GAAGA | 3 cut(s) | 504, 724, 727 |
| MfeI | CAATTG | 1 cut(s) | 482 |
| MflI | RGATCY | 3 cut(s) | 271, 1215, 1221 |
| MhlI | GDGCHC | 1 cut(s) | 459 |
| MlsI | TGGCCA | 2 cut(s) | 5, 77 |
| MluCI | AATT | 6 cut(s) | 80, 482, 496, 557, 785, 794 |
| MluNI | TGGCCA | 2 cut(s) | 5, 77 |
| Mly113I | GGCGCC | 1 cut(s) | 249 |
| MmeI | TCCRAC | 1 cut(s) | 830 |
| Mox20I | TGGCCA | 2 cut(s) | 5, 77 |
| MroI | TCCGGA | 1 cut(s) | 841 |
| MroNI | GCCGGC | 1 cut(s) | 909 |
| MscI | TGGCCA | 2 cut(s) | 5, 77 |
| MseI | TTAA | 3 cut(s) | 213, 396, 977 |
| Msp20I | TGGCCA | 2 cut(s) | 5, 77 |
| MspI | CCGG | 4 cut(s) | 217, 791, 842, 910 |
| MspR9I | CCNGG | 2 cut(s) | 205, 218 |
| MunI | CAATTG | 1 cut(s) | 482 |
| Mva1269I | GAATGC | 1 cut(s) | 1151 |
| MvaI | CCWGG | 1 cut(s) | 205 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 32, 359, 676 |
| NaeI | GCCGGC | 1 cut(s) | 911 |
| NarI | GGCGCC | 1 cut(s) | 249 |
| NciI | CCSGG | 1 cut(s) | 218 |
| NdeII | GATC | 6 cut(s) | 271, 282, 661, 1120, 1215, 1221 |
| NgoMIV | GCCGGC | 1 cut(s) | 909 |
| NlaIII | CATG | 8 cut(s) | 22, 455, 530, 670, 728, 835, 887, 1059 |
| NlaIV | GGNNCC | 8 cut(s) | 202, 250, 479, 651, 908, 922, 972, 1217 |
| NspI | RCATGY | 1 cut(s) | 887 |
| PceI | AGGCCT | 1 cut(s) | 568 |
| PciI | ACATGT | 1 cut(s) | 883 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1116 |
| PctI | GAATGC | 1 cut(s) | 1151 |
| PdiI | GCCGGC | 1 cut(s) | 911 |
| PfeI | GAWTC | 3 cut(s) | 208, 934, 1020 |
| PkrI | GCNGC | 3 cut(s) | 102, 173, 1192 |
| PluTI | GGCGCC | 1 cut(s) | 252 |
| Ppu21I | YACGTR | 1 cut(s) | 299 |
| PpuMI | RGGWCCY | 1 cut(s) | 1166 |
| PscI | ACATGT | 1 cut(s) | 883 |
| Psp5II | RGGWCCY | 1 cut(s) | 1166 |
| Psp6I | CCWGG | 1 cut(s) | 203 |
| PspFI | CCCAGC | 3 cut(s) | 124, 362, 1091 |
| PspGI | CCWGG | 1 cut(s) | 203 |
| PspN4I | GGNNCC | 8 cut(s) | 202, 250, 479, 651, 908, 922, 972, 1217 |
| PspPI | GGNCC | 5 cut(s) | 92, 907, 990, 1094, 1166 |
| PspPPI | RGGWCCY | 1 cut(s) | 1166 |
| PstI | CTGCAG | 1 cut(s) | 237 |
| PsuI | RGATCY | 3 cut(s) | 271, 1215, 1221 |
| RigI | GGCCGGCC | 1 cut(s) | 913 |
| RsaI | GTAC | 6 cut(s) | 106, 297, 409, 628, 651, 741 |
| RsaNI | GTAC | 6 cut(s) | 105, 296, 408, 627, 650, 740 |
| SalI | GTCGAC | 1 cut(s) | 424 |
| SaqAI | TTAA | 3 cut(s) | 213, 396, 977 |
| SatI | GCNGC | 3 cut(s) | 101, 172, 1191 |
| Sau3AI | GATC | 6 cut(s) | 271, 282, 661, 1120, 1215, 1221 |
| Sau96I | GGNCC | 5 cut(s) | 92, 907, 990, 1094, 1166 |
| SbfI | CCTGCAGG | 1 cut(s) | 237 |
| ScaI | AGTACT | 1 cut(s) | 741 |
| ScrFI | CCNGG | 2 cut(s) | 205, 218 |
| SdaI | CCTGCAGG | 1 cut(s) | 237 |
| SduI | GDGCHC | 1 cut(s) | 459 |
| SfaNI | GCATC | 6 cut(s) | 87, 362, 592, 949, 1187, 1218 |
| SfcI | CTRYAG | 1 cut(s) | 233 |
| SfoI | GGCGCC | 1 cut(s) | 250 |
| SinI | GGWCC | 2 cut(s) | 92, 1166 |
| SmiI | ATTTAAAT | 1 cut(s) | 397 |
| SmlI | CTYRAG | 2 cut(s) | 111, 158 |
| SmoI | CTYRAG | 2 cut(s) | 111, 158 |
| SnaBI | TACGTA | 1 cut(s) | 299 |
| Sse8387I | CCTGCAGG | 1 cut(s) | 237 |
| Sse9I | AATT | 6 cut(s) | 80, 482, 496, 557, 785, 794 |
| SseBI | AGGCCT | 1 cut(s) | 568 |
| SsiI | CCGC | 2 cut(s) | 172, 679 |
| SspDI | GGCGCC | 1 cut(s) | 248 |
| SspI | AATATT | 2 cut(s) | 310, 340 |
| SspMI | CTAG | 4 cut(s) | 441, 570, 612, 1225 |
| StuI | AGGCCT | 1 cut(s) | 568 |
| StyD4I | CCNGG | 2 cut(s) | 203, 216 |
| StyI | CCWWGG | 1 cut(s) | 569 |
| SwaI | ATTTAAAT | 1 cut(s) | 397 |
| TaaI | ACNGT | 3 cut(s) | 151, 423, 537 |
| TaiI | ACGT | 4 cut(s) | 168, 301, 555, 1036 |
| TaqI | TCGA | 3 cut(s) | 281, 425, 1119 |
| TaqII | GACCGA | 1 cut(s) | 109 |
| TasI | AATT | 6 cut(s) | 80, 482, 496, 557, 785, 794 |
| TatI | WGTACW | 3 cut(s) | 407, 626, 739 |
| TauI | GCSGC | 1 cut(s) | 174 |
| TfiI | GAWTC | 3 cut(s) | 208, 934, 1020 |
| Tru1I | TTAA | 3 cut(s) | 213, 396, 977 |
| Tru9I | TTAA | 3 cut(s) | 213, 396, 977 |
| TscAI | CASTG | 3 cut(s) | 426, 660, 1135 |
| TseI | GCWGC | 2 cut(s) | 100, 1190 |
| TspDTI | ATGAA | 2 cut(s) | 359, 734 |
| TspGWI | ACGGA | 2 cut(s) | 610, 1171 |
| TspRI | CASTG | 3 cut(s) | 426, 660, 1135 |
| VpaK11BI | GGWCC | 2 cut(s) | 92, 1166 |
| XapI | RAATTY | 3 cut(s) | 496, 557, 794 |
| XceI | RCATGY | 1 cut(s) | 887 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 148 |
| XmaJI | CCTAGG | 1 cut(s) | 569 |
| XmiI | GTMKAC | 1 cut(s) | 425 |
| XspI | CTAG | 4 cut(s) | 441, 570, 612, 1225 |
| ZrmI | AGTACT | 1 cut(s) | 741 |