Beta-amylase
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Exo_endo_phos | PF03372 | 6 - 182 | 1.1e-09 | Endonuclease/Exonuclease/phosphatase family |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 219 |
| Acc36I | ACCTGC | 1 cut(s) | 395 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 504 |
| AciI | CCGC | 1 cut(s) | 161 |
| AclWI | GGATC | 3 cut(s) | 78, 253, 618 |
| AcoI | YGGCCR | 2 cut(s) | 175, 495 |
| AcsI | RAATTY | 1 cut(s) | 680 |
| AcuI | CTGAAG | 1 cut(s) | 177 |
| AdeI | CACNNNGTG | 1 cut(s) | 504 |
| AfaI | GTAC | 2 cut(s) | 640, 657 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 297, 351, 433, 504 |
| AgeI | ACCGGT | 1 cut(s) | 266 |
| AgsI | TTSAA | 3 cut(s) | 67, 373, 385 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 178 |
| AjnI | CCWGG | 1 cut(s) | 468 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 464, 496 |
| AluBI | AGCT | 2 cut(s) | 62, 583 |
| AluI | AGCT | 2 cut(s) | 62, 583 |
| Alw26I | GTCTC | 3 cut(s) | 118, 141, 360 |
| AlwI | GGATC | 3 cut(s) | 78, 253, 618 |
| AoxI | GGCC | 2 cut(s) | 175, 495 |
| ApeKI | GCWGC | 1 cut(s) | 700 |
| ApoI | RAATTY | 1 cut(s) | 680 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 88, 120 |
| AsiGI | ACCGGT | 1 cut(s) | 266 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 162 |
| AspLEI | GCGC | 2 cut(s) | 220, 426 |
| AspS9I | GGNCC | 2 cut(s) | 407, 488 |
| AvaII | GGWCC | 2 cut(s) | 407, 488 |
| BalI | TGGCCA | 1 cut(s) | 497 |
| BceAI | ACGGC | 2 cut(s) | 190, 524 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 197, 231 |
| BciT130I | CCWGG | 1 cut(s) | 470 |
| BcoDI | GTCTC | 3 cut(s) | 118, 141, 360 |
| BfaI | CTAG | 2 cut(s) | 140, 636 |
| BfoI | RGCGCY | 1 cut(s) | 427 |
| BfuAI | ACCTGC | 1 cut(s) | 395 |
| BglII | AGATCT | 1 cut(s) | 325 |
| BisI | GCNGC | 1 cut(s) | 701 |
| BlsI | GCNGC | 1 cut(s) | 702 |
| Bme1390I | CCNGG | 1 cut(s) | 470 |
| Bme18I | GGWCC | 2 cut(s) | 407, 488 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 178 |
| BmgT120I | GGNCC | 2 cut(s) | 407, 488 |
| BmiI | GGNNCC | 1 cut(s) | 482 |
| BmrFI | CCNGG | 1 cut(s) | 470 |
| BmsI | GCATC | 1 cut(s) | 220 |
| BsaJI | CCNNGG | 3 cut(s) | 291, 350, 484 |
| BsaWI | WCCGGW | 1 cut(s) | 266 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 297, 351, 433, 504 |
| Bse118I | RCCGGY | 1 cut(s) | 266 |
| Bse1I | ACTGG | 2 cut(s) | 133, 178 |
| BseBI | CCWGG | 1 cut(s) | 470 |
| BseDI | CCNNGG | 3 cut(s) | 291, 350, 484 |
| BseGI | GGATG | 2 cut(s) | 578, 703 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 297, 351, 433, 504 |
| BseMII | CTCAG | 3 cut(s) | 31, 181, 525 |
| BseNI | ACTGG | 2 cut(s) | 133, 178 |
| BseRI | GAGGAG | 1 cut(s) | 308 |
| BshFI | GGCC | 2 cut(s) | 177, 497 |
| BshTI | ACCGGT | 1 cut(s) | 266 |
| BsiSI | CCGG | 1 cut(s) | 267 |
| BslFI | GGGAC | 1 cut(s) | 602 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 297, 351, 433, 504 |
| BsmAI | GTCTC | 3 cut(s) | 118, 141, 360 |
| BsmFI | GGGAC | 1 cut(s) | 602 |
| BsnI | GGCC | 2 cut(s) | 177, 497 |
| Bsp143I | GATC | 6 cut(s) | 70, 245, 325, 360, 463, 610 |
| Bsp19I | CCATGG | 1 cut(s) | 484 |
| BspACI | CCGC | 1 cut(s) | 161 |
| BspANI | GGCC | 2 cut(s) | 177, 497 |
| BspCNI | CTCAG | 3 cut(s) | 30, 180, 524 |
| BspLI | GGNNCC | 1 cut(s) | 482 |
| BspMI | ACCTGC | 1 cut(s) | 395 |
| BspPI | GGATC | 3 cut(s) | 78, 253, 618 |
| BsrFI | RCCGGY | 1 cut(s) | 266 |
| BsrI | ACTGG | 2 cut(s) | 133, 178 |
| BssAI | RCCGGY | 1 cut(s) | 266 |
| BssECI | CCNNGG | 3 cut(s) | 291, 350, 484 |
| BssMI | GATC | 6 cut(s) | 70, 245, 325, 360, 463, 610 |
| BssT1I | CCWWGG | 2 cut(s) | 350, 484 |
| Bst2UI | CCWGG | 1 cut(s) | 470 |
| Bst4CI | ACNGT | 1 cut(s) | 643 |
| Bst6I | CTCTTC | 1 cut(s) | 627 |
| BstDEI | CTNAG | 4 cut(s) | 17, 167, 413, 511 |
| BstDSI | CCRYGG | 1 cut(s) | 484 |
| BstF5I | GGATG | 2 cut(s) | 578, 703 |
| BstH2I | RGCGCY | 1 cut(s) | 427 |
| BstHHI | GCGC | 2 cut(s) | 220, 426 |
| BstKTI | GATC | 6 cut(s) | 73, 248, 328, 363, 466, 613 |
| BstMAI | GTCTC | 3 cut(s) | 118, 141, 360 |
| BstMBI | GATC | 6 cut(s) | 70, 245, 325, 360, 463, 610 |
| BstNI | CCWGG | 1 cut(s) | 470 |
| BstNSI | RCATGY | 1 cut(s) | 199 |
| BstSCI | CCNGG | 1 cut(s) | 468 |
| BstX2I | RGATCY | 2 cut(s) | 70, 325 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 185 |
| BstYI | RGATCY | 2 cut(s) | 70, 325 |
| BsuRI | GGCC | 2 cut(s) | 177, 497 |
| BtgI | CCRYGG | 1 cut(s) | 484 |
| BtsCI | GGATG | 2 cut(s) | 578, 703 |
| BtsIMutI | CAGTG | 1 cut(s) | 175 |
| BveI | ACCTGC | 1 cut(s) | 395 |
| CfoI | GCGC | 2 cut(s) | 220, 426 |
| Cfr10I | RCCGGY | 1 cut(s) | 266 |
| Cfr13I | GGNCC | 2 cut(s) | 407, 488 |
| Csp6I | GTAC | 2 cut(s) | 639, 656 |
| CspAI | ACCGGT | 1 cut(s) | 266 |
| CviAII | CATG | 6 cut(s) | 152, 196, 485, 501, 555, 614 |
| CviJI | RGCY | 8 cut(s) | 62, 177, 279, 497, 539, 583, 635, 689 |
| CviKI_1 | RGCY | 8 cut(s) | 62, 177, 279, 497, 539, 583, 635, 689 |
| CviQI | GTAC | 2 cut(s) | 639, 656 |
| DdeI | CTNAG | 4 cut(s) | 17, 167, 413, 511 |
| DpnI | GATC | 6 cut(s) | 72, 247, 327, 362, 465, 612 |
| DpnII | GATC | 6 cut(s) | 70, 245, 325, 360, 463, 610 |
| DraIII | CACNNNGTG | 1 cut(s) | 504 |
| DriI | GACNNNNNGTC | 1 cut(s) | 178 |
| EaeI | YGGCCR | 2 cut(s) | 175, 495 |
| Eam1104I | CTCTTC | 1 cut(s) | 627 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 178 |
| EarI | CTCTTC | 1 cut(s) | 627 |
| Eco130I | CCWWGG | 2 cut(s) | 350, 484 |
| Eco47I | GGWCC | 2 cut(s) | 407, 488 |
| Eco57I | CTGAAG | 1 cut(s) | 177 |
| EcoO109I | RGGNCCY | 1 cut(s) | 407 |
| EcoRII | CCWGG | 1 cut(s) | 468 |
| EcoT14I | CCWWGG | 2 cut(s) | 350, 484 |
| EcoT22I | ATGCAT | 1 cut(s) | 548 |
| ErhI | CCWWGG | 2 cut(s) | 350, 484 |
| FaeI | CATG | 6 cut(s) | 155, 199, 488, 504, 558, 617 |
| FaqI | GGGAC | 1 cut(s) | 602 |
| FatI | CATG | 6 cut(s) | 151, 195, 484, 500, 554, 613 |
| Fnu4HI | GCNGC | 1 cut(s) | 701 |
| FokI | GGATG | 2 cut(s) | 585, 690 |
| Fsp4HI | GCNGC | 1 cut(s) | 701 |
| FspBI | CTAG | 2 cut(s) | 140, 636 |
| FspI | TGCGCA | 1 cut(s) | 219 |
| GlaI | GCGC | 2 cut(s) | 219, 425 |
| GluI | GCNGC | 1 cut(s) | 701 |
| HaeII | RGCGCY | 1 cut(s) | 427 |
| HaeIII | GGCC | 2 cut(s) | 177, 497 |
| HapII | CCGG | 1 cut(s) | 267 |
| HhaI | GCGC | 2 cut(s) | 220, 426 |
| Hin1II | CATG | 6 cut(s) | 155, 199, 488, 504, 558, 617 |
| Hin6I | GCGC | 2 cut(s) | 218, 424 |
| HinP1I | GCGC | 2 cut(s) | 218, 424 |
| HinfI | GANTC | 4 cut(s) | 239, 301, 341, 605 |
| HpaII | CCGG | 1 cut(s) | 267 |
| Hpy188I | TCNGA | 5 cut(s) | 334, 365, 514, 604, 610 |
| Hpy188III | TCNNGA | 3 cut(s) | 107, 243, 358 |
| HpyAV | CCTTC | 4 cut(s) | 61, 104, 561, 609 |
| HpyCH4III | ACNGT | 1 cut(s) | 643 |
| HpyCH4IV | ACGT | 1 cut(s) | 658 |
| HpyCH4V | TGCA | 4 cut(s) | 30, 404, 546, 700 |
| HpyF3I | CTNAG | 4 cut(s) | 17, 167, 413, 511 |
| HpySE526I | ACGT | 1 cut(s) | 658 |
| Hsp92II | CATG | 6 cut(s) | 155, 199, 488, 504, 558, 617 |
| HspAI | GCGC | 2 cut(s) | 218, 424 |
| Kzo9I | GATC | 6 cut(s) | 70, 245, 325, 360, 463, 610 |
| LmnI | GCTCC | 1 cut(s) | 421 |
| LweI | GCATC | 1 cut(s) | 220 |
| MaeI | CTAG | 2 cut(s) | 140, 636 |
| MaeII | ACGT | 1 cut(s) | 658 |
| MaeIII | GTNAC | 3 cut(s) | 49, 170, 262 |
| MalI | GATC | 6 cut(s) | 72, 247, 327, 362, 465, 612 |
| MboI | GATC | 6 cut(s) | 70, 245, 325, 360, 463, 610 |
| MboII | GAAGA | 2 cut(s) | 614, 617 |
| MflI | RGATCY | 2 cut(s) | 70, 325 |
| MlsI | TGGCCA | 1 cut(s) | 497 |
| MluCI | AATT | 5 cut(s) | 25, 96, 314, 585, 680 |
| MluNI | TGGCCA | 1 cut(s) | 497 |
| MlyI | GAGTC | 2 cut(s) | 248, 599 |
| MnlI | CCTC | 9 cut(s) | 26, 202, 286, 291, 420, 426, 606, 630, 679 |
| Mox20I | TGGCCA | 1 cut(s) | 497 |
| Mph1103I | ATGCAT | 1 cut(s) | 548 |
| MroXI | GAANNNNTTC | 1 cut(s) | 162 |
| MscI | TGGCCA | 1 cut(s) | 497 |
| MseI | TTAA | 2 cut(s) | 320, 709 |
| MslI | CAYNNNNRTG | 1 cut(s) | 228 |
| Msp20I | TGGCCA | 1 cut(s) | 497 |
| MspI | CCGG | 1 cut(s) | 267 |
| MspR9I | CCNGG | 1 cut(s) | 470 |
| MvaI | CCWGG | 1 cut(s) | 470 |
| NcoI | CCATGG | 1 cut(s) | 484 |
| NdeII | GATC | 6 cut(s) | 70, 245, 325, 360, 463, 610 |
| NlaIII | CATG | 6 cut(s) | 155, 199, 488, 504, 558, 617 |
| NlaIV | GGNNCC | 1 cut(s) | 482 |
| NmuCI | GTSAC | 3 cut(s) | 49, 170, 262 |
| NsbI | TGCGCA | 1 cut(s) | 219 |
| NsiI | ATGCAT | 1 cut(s) | 548 |
| NspI | RCATGY | 1 cut(s) | 199 |
| PdmI | GAANNNNTTC | 1 cut(s) | 162 |
| PfeI | GAWTC | 2 cut(s) | 301, 341 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 504 |
| PfoI | TCCNGGA | 1 cut(s) | 468 |
| PinAI | ACCGGT | 1 cut(s) | 266 |
| PkrI | GCNGC | 1 cut(s) | 702 |
| PleI | GAGTC | 2 cut(s) | 247, 599 |
| PpsI | GAGTC | 2 cut(s) | 247, 599 |
| PpuMI | RGGWCCY | 1 cut(s) | 407 |
| Psp5II | RGGWCCY | 1 cut(s) | 407 |
| Psp6I | CCWGG | 1 cut(s) | 468 |
| PspGI | CCWGG | 1 cut(s) | 468 |
| PspN4I | GGNNCC | 1 cut(s) | 482 |
| PspPI | GGNCC | 2 cut(s) | 407, 488 |
| PspPPI | RGGWCCY | 1 cut(s) | 407 |
| PsuI | RGATCY | 2 cut(s) | 70, 325 |
| RsaI | GTAC | 2 cut(s) | 640, 657 |
| RsaNI | GTAC | 2 cut(s) | 639, 656 |
| RseI | CAYNNNNRTG | 1 cut(s) | 228 |
| SaqAI | TTAA | 2 cut(s) | 320, 709 |
| SatI | GCNGC | 1 cut(s) | 701 |
| Sau3AI | GATC | 6 cut(s) | 70, 245, 325, 360, 463, 610 |
| Sau96I | GGNCC | 2 cut(s) | 407, 488 |
| SchI | GAGTC | 2 cut(s) | 248, 599 |
| ScrFI | CCNGG | 1 cut(s) | 470 |
| SetI | ASST | 9 cut(s) | 37, 64, 145, 339, 352, 409, 553, 585, 661 |
| SfaNI | GCATC | 1 cut(s) | 220 |
| SinI | GGWCC | 2 cut(s) | 407, 488 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 228 |
| Sse9I | AATT | 5 cut(s) | 25, 96, 314, 585, 680 |
| SsiI | CCGC | 1 cut(s) | 161 |
| SspMI | CTAG | 2 cut(s) | 140, 636 |
| StyD4I | CCNGG | 1 cut(s) | 468 |
| StyI | CCWWGG | 2 cut(s) | 350, 484 |
| TaaI | ACNGT | 1 cut(s) | 643 |
| TaiI | ACGT | 1 cut(s) | 661 |
| TaqI | TCGA | 3 cut(s) | 88, 286, 561 |
| TasI | AATT | 5 cut(s) | 25, 96, 314, 585, 680 |
| TfiI | GAWTC | 2 cut(s) | 301, 341 |
| Tru1I | TTAA | 2 cut(s) | 320, 709 |
| Tru9I | TTAA | 2 cut(s) | 320, 709 |
| TscAI | CASTG | 1 cut(s) | 175 |
| TseFI | GTSAC | 3 cut(s) | 49, 170, 262 |
| TseI | GCWGC | 1 cut(s) | 700 |
| Tsp45I | GTSAC | 3 cut(s) | 49, 170, 262 |
| TspDTI | ATGAA | 3 cut(s) | 17, 543, 578 |
| TspRI | CASTG | 1 cut(s) | 175 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 504 |
| VpaK11BI | GGWCC | 2 cut(s) | 407, 488 |
| XapI | RAATTY | 1 cut(s) | 680 |
| XceI | RCATGY | 1 cut(s) | 199 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 498 |
| XmnI | GAANNNNTTC | 1 cut(s) | 162 |
| XspI | CTAG | 2 cut(s) | 140, 636 |
| Zsp2I | ATGCAT | 1 cut(s) | 548 |