No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 350 |
| AccBSI | CCGCTC | 1 cut(s) | 707 |
| AccI | GTMKAC | 1 cut(s) | 527 |
| AccII | CGCG | 1 cut(s) | 295 |
| AciI | CCGC | 3 cut(s) | 175, 707, 793 |
| AclWI | GGATC | 2 cut(s) | 197, 694 |
| AcsI | RAATTY | 1 cut(s) | 667 |
| AcuI | CTGAAG | 2 cut(s) | 516, 595 |
| AcyI | GRCGYC | 1 cut(s) | 347 |
| AfaI | GTAC | 1 cut(s) | 406 |
| AgsI | TTSAA | 7 cut(s) | 86, 92, 546, 744, 775, 832, 852 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 175 |
| AjnI | CCWGG | 1 cut(s) | 12 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 438, 470 |
| AluBI | AGCT | 4 cut(s) | 166, 200, 411, 558 |
| AluI | AGCT | 4 cut(s) | 166, 200, 411, 558 |
| Alw26I | GTCTC | 2 cut(s) | 9, 354 |
| AlwI | GGATC | 2 cut(s) | 197, 694 |
| AoxI | GGCC | 3 cut(s) | 57, 254, 639 |
| ApeKI | GCWGC | 5 cut(s) | 98, 316, 589, 790, 840 |
| ApoI | RAATTY | 1 cut(s) | 667 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 453 |
| AspLEI | GCGC | 2 cut(s) | 295, 845 |
| AspS9I | GGNCC | 1 cut(s) | 58 |
| AsuHPI | GGTGA | 1 cut(s) | 794 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 441, 473 |
| BbsI | GAAGAC | 3 cut(s) | 24, 601, 614 |
| BbvI | GCAGC | 5 cut(s) | 110, 303, 601, 802, 852 |
| BccI | CCATC | 2 cut(s) | 437, 756 |
| BciT130I | CCWGG | 1 cut(s) | 14 |
| BcoDI | GTCTC | 2 cut(s) | 9, 354 |
| BfaI | CTAG | 3 cut(s) | 197, 252, 581 |
| BfmI | CTRYAG | 1 cut(s) | 587 |
| BisI | GCNGC | 5 cut(s) | 99, 317, 590, 791, 841 |
| BlpI | GCTNAGC | 1 cut(s) | 717 |
| BlsI | GCNGC | 5 cut(s) | 100, 318, 591, 792, 842 |
| Bme1390I | CCNGG | 1 cut(s) | 14 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 175 |
| BmgT120I | GGNCC | 1 cut(s) | 58 |
| BmrFI | CCNGG | 1 cut(s) | 14 |
| BmsI | GCATC | 7 cut(s) | 274, 303, 372, 394, 529, 608, 827 |
| BpiI | GAAGAC | 3 cut(s) | 24, 601, 614 |
| BpmI | CTGGAG | 1 cut(s) | 201 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 717 |
| Bsa29I | ATCGAT | 1 cut(s) | 142 |
| BsaHI | GRCGYC | 1 cut(s) | 347 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 438, 468 |
| Bse1I | ACTGG | 1 cut(s) | 603 |
| BseBI | CCWGG | 1 cut(s) | 14 |
| BseCI | ATCGAT | 1 cut(s) | 142 |
| BseGI | GGATG | 5 cut(s) | 318, 329, 599, 767, 842 |
| BseNI | ACTGG | 1 cut(s) | 603 |
| BseXI | GCAGC | 5 cut(s) | 110, 303, 601, 802, 852 |
| BsgI | GTGCAG | 1 cut(s) | 542 |
| Bsh1236I | CGCG | 1 cut(s) | 295 |
| BshFI | GGCC | 3 cut(s) | 59, 256, 641 |
| BshVI | ATCGAT | 1 cut(s) | 142 |
| BsiSI | CCGG | 1 cut(s) | 337 |
| BsmAI | GTCTC | 2 cut(s) | 9, 354 |
| BsmBI | CGTCTC | 1 cut(s) | 354 |
| BsnI | GGCC | 3 cut(s) | 59, 256, 641 |
| Bsp143I | GATC | 4 cut(s) | 20, 202, 394, 699 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 717 |
| BspACI | CCGC | 3 cut(s) | 175, 707, 793 |
| BspANI | GGCC | 3 cut(s) | 59, 256, 641 |
| BspDI | ATCGAT | 1 cut(s) | 142 |
| BspFNI | CGCG | 1 cut(s) | 295 |
| BspMAI | CTGCAG | 1 cut(s) | 591 |
| BspPI | GGATC | 2 cut(s) | 197, 694 |
| BsrBI | CCGCTC | 1 cut(s) | 707 |
| BsrI | ACTGG | 1 cut(s) | 603 |
| BssMI | GATC | 4 cut(s) | 20, 202, 394, 699 |
| BssNAI | GTATAC | 1 cut(s) | 528 |
| BssNI | GRCGYC | 1 cut(s) | 347 |
| Bst1107I | GTATAC | 1 cut(s) | 528 |
| Bst2UI | CCWGG | 1 cut(s) | 14 |
| Bst4CI | ACNGT | 1 cut(s) | 779 |
| Bst6I | CTCTTC | 2 cut(s) | 21, 444 |
| BstACI | GRCGYC | 1 cut(s) | 347 |
| BstC8I | GCNNGC | 1 cut(s) | 413 |
| BstDEI | CTNAG | 2 cut(s) | 461, 717 |
| BstF5I | GGATG | 5 cut(s) | 318, 329, 599, 767, 842 |
| BstFNI | CGCG | 1 cut(s) | 295 |
| BstHHI | GCGC | 2 cut(s) | 295, 845 |
| BstKTI | GATC | 4 cut(s) | 23, 205, 397, 702 |
| BstMAI | GTCTC | 2 cut(s) | 9, 354 |
| BstMBI | GATC | 4 cut(s) | 20, 202, 394, 699 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 172, 262, 586, 713 |
| BstNI | CCWGG | 1 cut(s) | 14 |
| BstNSI | RCATGY | 1 cut(s) | 482 |
| BstSCI | CCNGG | 1 cut(s) | 12 |
| BstSFI | CTRYAG | 1 cut(s) | 587 |
| BstUI | CGCG | 1 cut(s) | 295 |
| BstV1I | GCAGC | 5 cut(s) | 110, 303, 601, 802, 852 |
| BstV2I | GAAGAC | 3 cut(s) | 24, 601, 614 |
| BstX2I | RGATCY | 1 cut(s) | 699 |
| BstYI | RGATCY | 1 cut(s) | 699 |
| BstZ17I | GTATAC | 1 cut(s) | 528 |
| Bsu15I | ATCGAT | 1 cut(s) | 142 |
| BsuRI | GGCC | 3 cut(s) | 59, 256, 641 |
| BsuTUI | ATCGAT | 1 cut(s) | 142 |
| BtsCI | GGATG | 5 cut(s) | 318, 329, 599, 767, 842 |
| BtsI | GCAGTG | 1 cut(s) | 642 |
| BtsIMutI | CAGTG | 2 cut(s) | 610, 642 |
| Cac8I | GCNNGC | 1 cut(s) | 413 |
| CfoI | GCGC | 2 cut(s) | 295, 845 |
| Cfr13I | GGNCC | 1 cut(s) | 58 |
| ClaI | ATCGAT | 1 cut(s) | 142 |
| CseI | GACGC | 1 cut(s) | 642 |
| Csp6I | GTAC | 1 cut(s) | 405 |
| CviAII | CATG | 3 cut(s) | 425, 479, 503 |
| CviQI | GTAC | 1 cut(s) | 405 |
| DdeI | CTNAG | 2 cut(s) | 461, 717 |
| DpnI | GATC | 4 cut(s) | 22, 204, 396, 701 |
| DpnII | GATC | 4 cut(s) | 20, 202, 394, 699 |
| DriI | GACNNNNNGTC | 1 cut(s) | 175 |
| Eam1104I | CTCTTC | 2 cut(s) | 21, 444 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 175 |
| EarI | CTCTTC | 2 cut(s) | 21, 444 |
| Eco147I | AGGCCT | 1 cut(s) | 256 |
| Eco32I | GATATC | 2 cut(s) | 140, 241 |
| Eco57I | CTGAAG | 2 cut(s) | 516, 595 |
| EcoO109I | RGGNCCY | 1 cut(s) | 58 |
| EcoRII | CCWGG | 1 cut(s) | 12 |
| EcoRV | GATATC | 2 cut(s) | 140, 241 |
| EcoT22I | ATGCAT | 2 cut(s) | 289, 387 |
| Esp3I | CGTCTC | 1 cut(s) | 354 |
| FaeI | CATG | 3 cut(s) | 428, 482, 506 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 155, 187 |
| FatI | CATG | 3 cut(s) | 424, 478, 502 |
| FblI | GTMKAC | 1 cut(s) | 527 |
| Fnu4HI | GCNGC | 5 cut(s) | 99, 317, 590, 791, 841 |
| FokI | GGATG | 5 cut(s) | 316, 325, 586, 774, 849 |
| Fsp4HI | GCNGC | 5 cut(s) | 99, 317, 590, 791, 841 |
| FspBI | CTAG | 3 cut(s) | 197, 252, 581 |
| GlaI | GCGC | 2 cut(s) | 294, 844 |
| GluI | GCNGC | 5 cut(s) | 99, 317, 590, 791, 841 |
| GsuI | CTGGAG | 1 cut(s) | 201 |
| HaeIII | GGCC | 3 cut(s) | 59, 256, 641 |
| HapII | CCGG | 1 cut(s) | 337 |
| HgaI | GACGC | 1 cut(s) | 642 |
| HhaI | GCGC | 2 cut(s) | 295, 845 |
| Hin1I | GRCGYC | 1 cut(s) | 347 |
| Hin1II | CATG | 3 cut(s) | 428, 482, 506 |
| Hin6I | GCGC | 2 cut(s) | 293, 843 |
| HinP1I | GCGC | 2 cut(s) | 293, 843 |
| HincII | GTYRAC | 1 cut(s) | 367 |
| HindII | GTYRAC | 1 cut(s) | 367 |
| HindIII | AAGCTT | 2 cut(s) | 164, 409 |
| HinfI | GANTC | 6 cut(s) | 29, 103, 109, 814, 821, 828 |
| HpaI | GTTAAC | 1 cut(s) | 367 |
| HpaII | CCGG | 1 cut(s) | 337 |
| HphI | GGTGA | 1 cut(s) | 794 |
| Hpy166II | GTNNAC | 4 cut(s) | 367, 401, 528, 676 |
| Hpy188I | TCNGA | 7 cut(s) | 25, 49, 108, 381, 394, 614, 704 |
| Hpy188III | TCNNGA | 5 cut(s) | 180, 534, 811, 818, 825 |
| Hpy8I | GTNNAC | 4 cut(s) | 367, 401, 528, 676 |
| HpyAV | CCTTC | 1 cut(s) | 303 |
| HpyCH4III | ACNGT | 1 cut(s) | 779 |
| HpyCH4IV | ACGT | 3 cut(s) | 347, 403, 495 |
| HpyCH4V | TGCA | 7 cut(s) | 287, 385, 415, 523, 589, 758, 840 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 172, 262, 586, 713 |
| HpyF3I | CTNAG | 2 cut(s) | 461, 717 |
| HpySE526I | ACGT | 3 cut(s) | 347, 403, 495 |
| Hsp92I | GRCGYC | 1 cut(s) | 347 |
| Hsp92II | CATG | 3 cut(s) | 428, 482, 506 |
| HspAI | GCGC | 2 cut(s) | 293, 843 |
| KspAI | GTTAAC | 1 cut(s) | 367 |
| Kzo9I | GATC | 4 cut(s) | 20, 202, 394, 699 |
| LmnI | GCTCC | 2 cut(s) | 182, 475 |
| Lsp1109I | GCAGC | 5 cut(s) | 110, 303, 601, 802, 852 |
| LweI | GCATC | 7 cut(s) | 274, 303, 372, 394, 529, 608, 827 |
| MaeI | CTAG | 3 cut(s) | 197, 252, 581 |
| MaeII | ACGT | 3 cut(s) | 347, 403, 495 |
| MaeIII | GTNAC | 3 cut(s) | 64, 192, 427 |
| MalI | GATC | 4 cut(s) | 22, 204, 396, 701 |
| MbiI | CCGCTC | 1 cut(s) | 707 |
| MboI | GATC | 4 cut(s) | 20, 202, 394, 699 |
| MboII | GAAGA | 8 cut(s) | 24, 38, 74, 104, 461, 601, 614, 799 |
| MflI | RGATCY | 1 cut(s) | 699 |
| MluCI | AATT | 3 cut(s) | 86, 244, 667 |
| MlyI | GAGTC | 2 cut(s) | 38, 112 |
| MmeI | TCCRAC | 1 cut(s) | 773 |
| MnlI | CCTC | 8 cut(s) | 49, 51, 71, 267, 366, 445, 654, 721 |
| Mph1103I | ATGCAT | 2 cut(s) | 289, 387 |
| MroXI | GAANNNNTTC | 1 cut(s) | 453 |
| MseI | TTAA | 3 cut(s) | 366, 419, 859 |
| MslI | CAYNNNNRTG | 2 cut(s) | 507, 647 |
| MspA1I | CMGCKG | 1 cut(s) | 793 |
| MspI | CCGG | 1 cut(s) | 337 |
| MspR9I | CCNGG | 1 cut(s) | 14 |
| MvaI | CCWGG | 1 cut(s) | 14 |
| MvnI | CGCG | 1 cut(s) | 295 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 172, 262, 586, 713 |
| NdeII | GATC | 4 cut(s) | 20, 202, 394, 699 |
| NlaIII | CATG | 3 cut(s) | 428, 482, 506 |
| NmuCI | GTSAC | 2 cut(s) | 64, 192 |
| NsiI | ATGCAT | 2 cut(s) | 289, 387 |
| NspI | RCATGY | 1 cut(s) | 482 |
| PceI | AGGCCT | 1 cut(s) | 256 |
| PdmI | GAANNNNTTC | 1 cut(s) | 453 |
| PfeI | GAWTC | 4 cut(s) | 109, 814, 821, 828 |
| PkrI | GCNGC | 5 cut(s) | 100, 318, 591, 792, 842 |
| PleI | GAGTC | 2 cut(s) | 37, 111 |
| PpsI | GAGTC | 2 cut(s) | 37, 111 |
| Psp6I | CCWGG | 1 cut(s) | 12 |
| PspGI | CCWGG | 1 cut(s) | 12 |
| PspPI | GGNCC | 1 cut(s) | 58 |
| PstI | CTGCAG | 1 cut(s) | 591 |
| PsuI | RGATCY | 1 cut(s) | 699 |
| RsaI | GTAC | 1 cut(s) | 406 |
| RsaNI | GTAC | 1 cut(s) | 405 |
| RseI | CAYNNNNRTG | 2 cut(s) | 507, 647 |
| SaqAI | TTAA | 3 cut(s) | 366, 419, 859 |
| SatI | GCNGC | 5 cut(s) | 99, 317, 590, 791, 841 |
| Sau3AI | GATC | 4 cut(s) | 20, 202, 394, 699 |
| Sau96I | GGNCC | 1 cut(s) | 58 |
| SchI | GAGTC | 2 cut(s) | 38, 112 |
| ScrFI | CCNGG | 1 cut(s) | 14 |
| SfaNI | GCATC | 7 cut(s) | 274, 303, 372, 394, 529, 608, 827 |
| SfcI | CTRYAG | 1 cut(s) | 587 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 507, 647 |
| Sse9I | AATT | 3 cut(s) | 86, 244, 667 |
| SseBI | AGGCCT | 1 cut(s) | 256 |
| SsiI | CCGC | 3 cut(s) | 175, 707, 793 |
| SspMI | CTAG | 3 cut(s) | 197, 252, 581 |
| StuI | AGGCCT | 1 cut(s) | 256 |
| StyD4I | CCNGG | 1 cut(s) | 12 |
| TaaI | ACNGT | 1 cut(s) | 779 |
| TaiI | ACGT | 3 cut(s) | 350, 406, 498 |
| TaqI | TCGA | 1 cut(s) | 142 |
| TasI | AATT | 3 cut(s) | 86, 244, 667 |
| TfiI | GAWTC | 4 cut(s) | 109, 814, 821, 828 |
| Tru1I | TTAA | 3 cut(s) | 366, 419, 859 |
| Tru9I | TTAA | 3 cut(s) | 366, 419, 859 |
| TscAI | CASTG | 2 cut(s) | 610, 649 |
| TseFI | GTSAC | 2 cut(s) | 64, 192 |
| TseI | GCWGC | 5 cut(s) | 98, 316, 589, 790, 840 |
| Tsp45I | GTSAC | 2 cut(s) | 64, 192 |
| TspDTI | ATGAA | 4 cut(s) | 101, 111, 506, 550 |
| TspRI | CASTG | 2 cut(s) | 610, 649 |
| XapI | RAATTY | 1 cut(s) | 667 |
| XceI | RCATGY | 1 cut(s) | 482 |
| XmiI | GTMKAC | 1 cut(s) | 527 |
| XmnI | GAANNNNTTC | 1 cut(s) | 453 |
| XspI | CTAG | 3 cut(s) | 197, 252, 581 |
| ZraI | GACGTC | 1 cut(s) | 348 |
| Zsp2I | ATGCAT | 2 cut(s) | 289, 387 |