Rmu_sc0007843.1_g000001

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0007843.1
OG0000032
Physical Location & Seq
Forward (+)
373 .. 2834
2462 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0007843.1_g000001.1.cds

Sequence Viewer

Length: 1464 bp
atgttgccgttgatctcacatgccacagcgcccaacataccaagatccggcagcgatgtcgtcaaactccaaccaaagagacaaattgagaacaactatcagcaagcctttgaggccagtccgacagcagccctgacatcatgtgaccaaggccgatatagatgccaggctaccaccggagtagcgccattcgatgctatgtgcgcggccgccaaccccagcaaacaaagcgatgtacgttgctcttggatcccaatttccgacaacatgtccaacatcgatgctgtgacattttcctttgctgcatcgctggcgcttgctagcagcgatgtggtggatgtttcacgaccctctgacggaatccaacgacgtgccaaacaatcctttctgttggcacatccttttgtgaagaaaccgacctctctgaatgatatgaagcgattccttcgaagagtcagggtcttgaagggaggaccatggcgttttcagcaagctccgatcgtgcttcaggagtatgatggcatcacccctgttgcagacgtggatctgacctcactattcttctgggttcgaatcaataatatatcgccgttggttcatgttcaacatgacatctcgaaacctttctttctcaagataaccctaaaactggcacctagggttgaagctgaaatttcatatttttttaaaaacctggtgggcaagtgtgatcactgtaatctaatttaccatgagggagatcattgccctttgcttggcagtcatactacaccgcaggcagtgcgtgaaactggagaacacagaaaagacattgttggcccttccttagggtttatcacaaataaatttgtgaatggaaccttccgttttcaaggtgtaaaaacatctattctccgatctatttgcaggactttcttccaacccaaggaagcaggtagggcacgtaaacctgtcatattgagtgacagatctctgaatccgaaagacaagggggaggaggtacatcgcttggcgttagcattgattgcaacatcggactcgggggtaccaaaccttacacctgtaggtactactgaactcatggagcttgaggaggggttggagtcagaacgagccaacaatacccaagagccaaatgattctgaggacaaaggtgaagctaccccgattgaagaaggaaaaaaagagcagcaaggtgacaagtgtctgcttcttccttctcctacaaaatctccccagaagctaaagttcctgctgccagaattattcaaaccggtactccctaatattcaaacaaagaagcagaaaatgccaatgttcacaagtaagttttctgctcggtctttgggtatgattgaagctccaggtaatattctagtgcctaaagatgtgatgccaactagttttctgaaacaaagaagaagagaggaagacctctgggatcaagaaataaaaatcccctga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

487

Amino Acids

54.34

Weight (kDa)

9.06

Isoelectric Point (pI)

56.6

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000032)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g20531 FvH4_1g22101 FvH4_1g26161 FvH4_2g06802 FvH4_2g07851 FvH4_2g07920 FvH4_2g11481 FvH4_2g14491 FvH4_2g14510 FvH4_3g02671 FvH4_3g10870 FvH4_3g16811 FvH4_3g18871 FvH4_3g20011 FvH4_3g29181 FvH4_3g30101 FvH4_3g33941 FvH4_4g08031 FvH4_4g10192 FvH4_4g20791 FvH4_5g02440 FvH4_5g03261 FvH4_5g15791 FvH4_5g22472 FvH4_5g23680 FvH4_5g26530 FvH4_5g26540 FvH4_5g30241 FvH4_5g32311 FvH4_5g38943 FvH4_6g05152 FvH4_6g10481 FvH4_6g14353 FvH4_6g17850 FvH4_6g19460 FvH4_6g23861 FvH4_6g30881 FvH4_6g31722 FvH4_6g40031 FvH4_6g46031 FvH4_6g49021 FvH4_7g12530 FvH4_7g15960
pyrus_communis pycom09g18450
rosa_chinensis RchiOBHm_Chr1g0341771 RchiOBHm_Chr1g0354791 RchiOBHm_Chr2g0095751 RchiOBHm_Chr5g0030691 RchiOBHm_Chr7g0181741 RchiOBHm_Chr7g0222721 RchiOBHm_Chr7g0243191
rosa_laevigata RLG00000001405 RLG00000001878 RLG00000002053 RLG00000002361 RLG00000003846 RLG00000012639 RLG00000013326 RLG00000014331 RLG00000017340 RLG00000017548 RLG00000018177 RLG00000018372 RLG00000019006 RLG00000019406 RLG00000019522 RLG00000019922 RLG00000020489 RLG00000022399 RLG00000023433 RLG00000027372 RLG00000028576 RLG00000028590 RLG00000028947 RLG00000032552 RLG00000033183 RLG00000033245 RLG00000033730 RLG00000034443 RLG00000034772 RLG00000036008
rosa_multiflora Rmu_co8029972.1_g000001 Rmu_co8044978.1_g000001 Rmu_co8338363.1_g000001 Rmu_co8426431.1_g000002 Rmu_co8457575.1_g000001 Rmu_sc0000010.1_g000025 Rmu_sc0000197.1_g000018 Rmu_sc0000220.1_g000009 Rmu_sc0000221.1_g000012 Rmu_sc0000258.1_g000002 Rmu_sc0000284.1_g000015 Rmu_sc0000303.1_g000021 Rmu_sc0000309.1_g000015 Rmu_sc0000317.1_g000017 Rmu_sc0000355.1_g000003 Rmu_sc0000376.1_g000035 Rmu_sc0000420.1_g000009 Rmu_sc0000493.1_g000019 Rmu_sc0000498.1_g000044 Rmu_sc0000540.1_g000015 Rmu_sc0000554.1_g000031 Rmu_sc0000577.1_g000004 Rmu_sc0000647.1_g000007 Rmu_sc0000703.1_g000002 Rmu_sc0000776.1_g000025 Rmu_sc0000924.1_g000044 Rmu_sc0000940.1_g000034 Rmu_sc0000940.1_g000036 Rmu_sc0000990.1_g000014 Rmu_sc0001004.1_g000018 Rmu_sc0001027.1_g000014 Rmu_sc0001059.1_g000004 Rmu_sc0001089.1_g000021 Rmu_sc0001118.1_g000013 Rmu_sc0001141.1_g000024 Rmu_sc0001154.1_g000002 Rmu_sc0001179.1_g000023 Rmu_sc0001230.1_g000014 Rmu_sc0001298.1_g000042 Rmu_sc0001306.1_g000030 Rmu_sc0001306.1_g000036 Rmu_sc0001341.1_g000007 Rmu_sc0001386.1_g000013 Rmu_sc0001461.1_g000019 Rmu_sc0001461.1_g000047 Rmu_sc0001476.1_g000013 Rmu_sc0001516.1_g000032 Rmu_sc0001780.1_g000007 Rmu_sc0001793.1_g000005 Rmu_sc0001911.1_g000013 Rmu_sc0001962.1_g000011 Rmu_sc0001986.1_g000004 Rmu_sc0002061.1_g000021 Rmu_sc0002119.1_g000024 Rmu_sc0002194.1_g000021 Rmu_sc0002284.1_g000019 Rmu_sc0002316.1_g000014 Rmu_sc0002322.1_g000006 Rmu_sc0002351.1_g000107 Rmu_sc0002387.1_g000008 Rmu_sc0002389.1_g000029 Rmu_sc0002507.1_g000001 Rmu_sc0002589.1_g000038 Rmu_sc0002638.1_g000041 Rmu_sc0002656.1_g000007 Rmu_sc0002882.1_g000030 Rmu_sc0002927.1_g000034 Rmu_sc0003024.1_g000020 Rmu_sc0003032.1_g000027 Rmu_sc0003069.1_g000025 Rmu_sc0003268.1_g000002 Rmu_sc0003296.1_g000007 Rmu_sc0003363.1_g000073 Rmu_sc0003527.1_g000017 Rmu_sc0003638.1_g000007 Rmu_sc0003669.1_g000007 Rmu_sc0003882.1_g000021 Rmu_sc0003941.1_g000004 Rmu_sc0003979.1_g000007 Rmu_sc0003983.1_g000007 Rmu_sc0003989.1_g000017 Rmu_sc0004016.1_g000003 Rmu_sc0004020.1_g000025 Rmu_sc0004094.1_g000016 Rmu_sc0004135.1_g000002 Rmu_sc0004154.1_g000014 Rmu_sc0004316.1_g000002 Rmu_sc0004316.1_g000015 Rmu_sc0004321.1_g000013 Rmu_sc0004467.1_g000005 Rmu_sc0004517.1_g000007 Rmu_sc0004642.1_g000012 Rmu_sc0004729.1_g000024 Rmu_sc0004757.1_g000018 Rmu_sc0004788.1_g000003 Rmu_sc0004835.1_g000026 Rmu_sc0004889.1_g000019 Rmu_sc0004991.1_g000009 Rmu_sc0005045.1_g000004 Rmu_sc0005079.1_g000004 Rmu_sc0005083.1_g000008 Rmu_sc0005170.1_g000002 Rmu_sc0005190.1_g000009 Rmu_sc0005217.1_g000010 Rmu_sc0005234.1_g000011 Rmu_sc0005608.1_g000016 Rmu_sc0005802.1_g000029 Rmu_sc0005810.1_g000006 Rmu_sc0005904.1_g000006 Rmu_sc0005967.1_g000012 Rmu_sc0006028.1_g000027 Rmu_sc0006059.1_g000040 Rmu_sc0006423.1_g000002 Rmu_sc0006467.1_g000001 Rmu_sc0006470.1_g000004 Rmu_sc0006598.1_g000003 Rmu_sc0006599.1_g000004 Rmu_sc0006632.1_g000021 Rmu_sc0006707.1_g000008 Rmu_sc0006791.1_g000008 Rmu_sc0006835.1_g000016 Rmu_sc0007100.1_g000002 Rmu_sc0007115.1_g000009 Rmu_sc0007362.1_g000012 Rmu_sc0007461.1_g000004 Rmu_sc0007474.1_g000001 Rmu_sc0007681.1_g000011 Rmu_sc0007697.1_g000003 Rmu_sc0007704.1_g000001 Rmu_sc0007722.1_g000016 Rmu_sc0007843.1_g000001 Rmu_sc0007856.1_g000009 Rmu_sc0008328.1_g000007 Rmu_sc0008780.1_g000005 Rmu_sc0009185.1_g000011 Rmu_sc0009599.1_g000021 Rmu_sc0009881.1_g000002 Rmu_sc0009891.1_g000002 Rmu_sc0010357.1_g000003 Rmu_sc0010781.1_g000005 Rmu_sc0011133.1_g000005 Rmu_sc0012334.1_g000001 Rmu_sc0012569.1_g000015 Rmu_sc0012984.1_g000001 Rmu_sc0013508.1_g000001 Rmu_sc0013550.1_g000005 Rmu_sc0013730.1_g000001 Rmu_sc0013945.1_g000001 Rmu_sc0013945.1_g000003 Rmu_sc0014005.1_g000005 Rmu_sc0014111.1_g000009 Rmu_sc0014111.1_g000010 Rmu_sc0014203.1_g000025 Rmu_sc0014839.1_g000002 Rmu_sc0015410.1_g000001 Rmu_sc0015513.1_g000003 Rmu_sc0015791.1_g000008 Rmu_sc0016657.1_g000004 Rmu_sc0017187.1_g000002 Rmu_sc0017400.1_g000001 Rmu_sc0017895.1_g000006 Rmu_sc0018221.1_g000008 Rmu_sc0018825.1_g000002 Rmu_sc0019047.1_g000001 Rmu_sc0019077.1_g000001 Rmu_sc0019171.1_g000001 Rmu_sc0019299.1_g000002 Rmu_sc0020342.1_g000008 Rmu_sc0020688.1_g000002 Rmu_sc0020688.1_g000003 Rmu_sc0021871.1_g000012 Rmu_sc0022925.1_g000001 Rmu_sc0023965.1_g000005 Rmu_sc0024968.1_g000001 Rmu_sc0024969.1_g000001 Rmu_sc0025035.1_g000002 Rmu_sc0025167.1_g000005 Rmu_sc0025567.1_g000001 Rmu_sc0026096.1_g000001 Rmu_sc0026586.1_g000001 Rmu_sc0028358.1_g000002 Rmu_sc0032171.1_g000001 Rmu_sc0034632.1_g000001 Rmu_sc0034633.1_g000001 Rmu_sc0035481.1_g000001 Rmu_sc0036303.1_g000001 Rmu_sc0039774.1_g000001 Rmu_sc0040023.1_g000002 Rmu_sc0040790.1_g000001 Rmu_sc0041574.1_g000001 Rmu_sc0042768.1_g000003 Rmu_ssc0000038.1_g000016 Rmu_ssc0000062.1_g000035 Rmu_ssc0000083.1_g000009 Rmu_ssc0000093.1_g000006 Rmu_ssc0000112.1_g000023 Rmu_ssc0000155.1_g000007 Rmu_ssc0000171.1_g000017 Rmu_ssc0000196.1_g000017 Rmu_ssc0000257.1_g000027 Rmu_ssc0000323.1_g000023 Rmu_ssc0000440.1_g000011 Rmu_ssc0000454.1_g000021 Rmu_ssc0000473.1_g000011
rosa_roxburghii Rroxscaffold_1G00014010 Rroxscaffold_1G00039470 Rroxscaffold_1G00045350 Rroxscaffold_2G00082440 Rroxscaffold_2G00096630 Rroxscaffold_2G00100560 Rroxscaffold_2G00102600 Rroxscaffold_2G00117720 Rroxscaffold_2G00120390 Rroxscaffold_2G00126010 Rroxscaffold_3G00220680 Rroxscaffold_3G00241760 Rroxscaffold_4G00309670 Rroxscaffold_4G00312380 Rroxscaffold_5G00339950 Rroxscaffold_5G00361980 Rroxscaffold_5G00370500 Rroxscaffold_5G00376480 Rroxscaffold_5G00384070 Rroxscaffold_6G00393690 Rroxscaffold_6G00396520 Rroxscaffold_6G00396850 Rroxscaffold_6G00404790 Rroxscaffold_7G00177690 Rroxscaffold_7G00178170 Rroxscaffold_7G00194330 Rroxscaffold_7G00197090 Rroxscaffold_9G00437910
rosa_rugosa Rorug01G0010100 Rorug01G0035300 Rorug01G0038600 Rorug01G0038700 Rorug01G0050300 Rorug01G0143800.1 Rorug01G0211700 Rorug01G0266600 Rorug01G0268800 Rorug01G0301200 Rorug02G0139800 Rorug02G0247100 Rorug02G0247100 Rorug02G0276800 Rorug02G0283300 Rorug02G0289800 Rorug02G0326700 Rorug02G0368100 Rorug02G0427000 Rorug02G0439100 Rorug02G0611200 Rorug02G0626600 Rorug03G0049100 Rorug03G0108000 Rorug03G0118600 Rorug03G0174300.1 Rorug03G0182300 Rorug03G0189800 Rorug03G0207000 Rorug03G0220700 Rorug03G0229400 Rorug03G0253700 Rorug03G0276500 Rorug03G0283300.1 Rorug03G0283500 Rorug03G0283600 Rorug03G0299600 Rorug04G0052200 Rorug04G0052300 Rorug04G0115800 Rorug04G0159700 Rorug04G0170900 Rorug04G0178100 Rorug04G0250800 Rorug04G0317200 Rorug04G0409500 Rorug05G0022500 Rorug05G0134900 Rorug05G0144800 Rorug05G0158200 Rorug05G0168300 Rorug05G0168400 Rorug05G0168600 Rorug05G0229800 Rorug05G0259100 Rorug05G0285700 Rorug05G0294600 Rorug05G0306400 Rorug05G0335300 Rorug05G0390100 Rorug05G0392900 Rorug05G0407100 Rorug05G0416600 Rorug05G0536900 Rorug05G0550300 Rorug06G0040900 Rorug06G0042800 Rorug06G0093000 Rorug06G0110700 Rorug06G0115600 Rorug06G0205700 Rorug07G0016900.1 Rorug07G0017000 Rorug07G0095200 Rorug07G0106400 Rorug07G0116400 Rorug07G0127300 Rorug07G0151100 Rorug07G0151200 Rorug07G0178200 Rorug07G0224300 Rorug07G0224400 Rorug07G0226400 Rorug07G0258200 Rorug07G0328000 RorugPtG0002700.1
rosa_samantha Rh1BG231600 Rh1BG235500 Rh1DG259300 Rh2AG044200 Rh2AG095600 Rh2AG164800 Rh2AG361400 Rh2AG370600 Rh2AG487800 Rh2AG620400 Rh2BG171900 Rh2BG244600 Rh2BG500300 Rh2CG189500 Rh2CG317600 Rh2CG374400 Rh2CG474300 Rh2DG170300 Rh2DG374800 Rh2DG511500 Rh3AG273400 Rh3AG331300 Rh3CG203900 Rh3CG222200 Rh3CG253800 Rh3CG269900 Rh3DG073800 Rh3DG208100 Rh3DG224000 Rh3DG265900 Rh4AG217200 Rh4BG076000 Rh4BG113200 Rh4BG240700 Rh4BG414300 Rh4CG266600 Rh4CG307600 Rh5BG088500 Rh5BG469000 Rh5CG284400 Rh5CG491200 Rh5CG557400 Rh5DG399000 Rh6AG457400 Rh6BG339800 Rh6BG443700 Rh6CG115400 Rh6CG471500 Rh6DG390100 Rh6DG457900 Rh7AG372100 Rh7AG429800 Rh7AG484600 Rh7BG176400 Rh7BG233900 Rh7BG244400 Rh7BG279800 Rh7BG285100 Rh7CG172200 Rh7CG390500 Rh7CG502600 Rh7CG518200 Rh7DG252500 Rh7DG294200 Rh7DG376400 Rh7DG390100
rosa_wichuraiana Rw0G001650

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 923
Acc65I GGTACC 1 cut(s) 1045
AccB1I GGYRCC 2 cut(s) 652, 1045
AccII CGCG 1 cut(s) 206
AciI CCGC 3 cut(s) 206, 210, 773
AclWI GGATC 5 cut(s) 39, 244, 257, 552, 1449
AcoI YGGCCR 1 cut(s) 207
AcsI RAATTY 2 cut(s) 672, 845
AcuI CTGAAG 1 cut(s) 491
AfaI GTAC 5 cut(s) 237, 1002, 1047, 1069, 1278
AfiI CCNNNNNNNGG 6 cut(s) 47, 356, 649, 755, 827, 925
AflIII ACRYGT 1 cut(s) 267
AgeI ACCGGT 1 cut(s) 1273
AgsI TTSAA 8 cut(s) 466, 605, 665, 872, 1172, 1270, 1292, 1358
AhdI GACNNNNNGTC 1 cut(s) 268
AhlI ACTAGT 1 cut(s) 1400
AjiI CACGTC 2 cut(s) 371, 541
AjnI CCWGG 3 cut(s) 165, 693, 1363
AluBI AGCT 6 cut(s) 494, 668, 1087, 1160, 1243, 1361
AluI AGCT 6 cut(s) 494, 668, 1087, 1160, 1243, 1361
Alw26I GTCTC 1 cut(s) 73
AlwI GGATC 5 cut(s) 39, 244, 257, 552, 1449
Ama87I CYCGRG 1 cut(s) 1039
AoxI GGCC 4 cut(s) 114, 151, 207, 817
ApeKI GCWGC 6 cut(s) 51, 128, 302, 324, 1189, 1255
ApoI RAATTY 2 cut(s) 672, 845
AsiGI ACCGGT 1 cut(s) 1273
Asp700I GAANNNNTTC 2 cut(s) 440, 623
Asp718I GGTACC 1 cut(s) 1045
AspA2I CCTAGG 1 cut(s) 656
AspLEI GCGC 4 cut(s) 31, 187, 206, 316
AspS9I GGNCC 2 cut(s) 473, 818
AsuHPI GGTGA 3 cut(s) 517, 1166, 1208
AsuII TTCGAA 2 cut(s) 448, 571
AsuNHI GCTAGC 1 cut(s) 320
AvaI CYCGRG 1 cut(s) 1039
AvaII GGWCC 1 cut(s) 473
AvrII CCTAGG 1 cut(s) 656
AxyI CCTNAGG 1 cut(s) 826
BaeGI GKGCMC 1 cut(s) 943
BamHI GGATCC 1 cut(s) 249
BanI GGYRCC 2 cut(s) 652, 1045
BbsI GAAGAC 1 cut(s) 1437
BbvI GCAGC 6 cut(s) 63, 140, 289, 336, 1201, 1242
BccI CCATC 1 cut(s) 512
BceAI ACGGC 1 cut(s) 574
BcgI CGANNNNNNTGC 6 cut(s) 40, 74, 144, 178, 885, 919
BciT130I CCWGG 3 cut(s) 167, 695, 1365
BclI TGATCA 1 cut(s) 709
BcoDI GTCTC 1 cut(s) 73
BcuI ACTAGT 1 cut(s) 1400
BfaI CTAG 4 cut(s) 321, 657, 1376, 1401
BfmI CTRYAG 1 cut(s) 1062
BfoI RGCGCY 3 cut(s) 32, 188, 317
BfuAI ACCTGC 1 cut(s) 923
BglI GCCNNNNNGGC 1 cut(s) 113
BglII AGATCT 1 cut(s) 968
BisI GCNGC 8 cut(s) 52, 129, 207, 210, 303, 325, 1190, 1256
BlnI CCTAGG 1 cut(s) 656
BlsI GCNGC 8 cut(s) 53, 130, 208, 211, 304, 326, 1191, 1257
Bme1390I CCNGG 3 cut(s) 167, 695, 1365
Bme18I GGWCC 1 cut(s) 473
BmeRI GACNNNNNGTC 1 cut(s) 268
BmeT110I CYCGRG 1 cut(s) 1039
BmgBI CACGTC 2 cut(s) 371, 541
BmgT120I GGNCC 2 cut(s) 473, 818
BmiI GGNNCC 4 cut(s) 251, 654, 859, 1047
BmrFI CCNGG 3 cut(s) 167, 695, 1365
BmsI GCATC 6 cut(s) 152, 184, 271, 314, 531, 1383
BmtI GCTAGC 1 cut(s) 324
BoxI GACNNNNGTC 1 cut(s) 1203
BpiI GAAGAC 1 cut(s) 1437
BpmI CTGGAG 2 cut(s) 813, 1347
Bpu14I TTCGAA 2 cut(s) 448, 571
BpuEI CTTGAG 2 cut(s) 617, 1109
Bsa29I ATCGAT 1 cut(s) 279
BsaAI YACGTR 1 cut(s) 944
BsaJI CCNNGG 4 cut(s) 148, 476, 656, 924
BsaWI WCCGGW 2 cut(s) 176, 1273
BsaXI ACNNNNNCTCC 4 cut(s) 1216, 1246, 1263, 1293
Bsc4I CCNNNNNNNGG 6 cut(s) 47, 356, 649, 755, 827, 925
Bse118I RCCGGY 1 cut(s) 1273
Bse1I ACTGG 3 cut(s) 117, 654, 796
Bse21I CCTNAGG 1 cut(s) 826
Bse3DI GCAATG 1 cut(s) 742
BseBI CCWGG 3 cut(s) 167, 695, 1365
BseCI ATCGAT 1 cut(s) 279
BseDI CCNNGG 4 cut(s) 148, 476, 656, 924
BseGI GGATG 2 cut(s) 343, 397
BseLI CCNNNNNNNGG 6 cut(s) 47, 356, 649, 755, 827, 925
BseMI GCAATG 1 cut(s) 742
BseMII CTCAG 1 cut(s) 1134
BseNI ACTGG 3 cut(s) 117, 654, 796
BseRI GAGGAG 2 cut(s) 1010, 1106
BseSI GKGCMC 1 cut(s) 943
BseX3I CGGCCG 1 cut(s) 207
BseXI GCAGC 6 cut(s) 63, 140, 289, 336, 1201, 1242
BseYI CCCAGC 1 cut(s) 218
Bsh1236I CGCG 1 cut(s) 206
Bsh1285I CGRYCG 2 cut(s) 210, 501
BshFI GGCC 4 cut(s) 116, 153, 209, 819
BshNI GGYRCC 2 cut(s) 652, 1045
BshTI ACCGGT 1 cut(s) 1273
BshVI ATCGAT 1 cut(s) 279
BsiEI CGRYCG 2 cut(s) 210, 501
BsiHKCI CYCGRG 1 cut(s) 1039
BsiSI CCGG 3 cut(s) 48, 177, 1274
BslI CCNNNNNNNGG 6 cut(s) 47, 356, 649, 755, 827, 925
BsmAI GTCTC 1 cut(s) 73
BsnI GGCC 4 cut(s) 116, 153, 209, 819
BsoBI CYCGRG 1 cut(s) 1039
Bsp119I TTCGAA 2 cut(s) 448, 571
Bsp1286I GDGCHC 1 cut(s) 943
Bsp19I CCATGG 1 cut(s) 476
BspACI CCGC 3 cut(s) 206, 210, 773
BspANI GGCC 4 cut(s) 116, 153, 209, 819
BspCNI CTCAG 1 cut(s) 1135
BspDI ATCGAT 1 cut(s) 279
BspFNI CGCG 1 cut(s) 206
BspLI GGNNCC 4 cut(s) 251, 654, 859, 1047
BspMI ACCTGC 1 cut(s) 923
BspOI GCTAGC 1 cut(s) 324
BspPI GGATC 5 cut(s) 39, 244, 257, 552, 1449
BspT104I TTCGAA 2 cut(s) 448, 571
BspT107I GGYRCC 2 cut(s) 652, 1045
BsrDI GCAATG 1 cut(s) 742
BsrFI RCCGGY 1 cut(s) 1273
BsrI ACTGG 3 cut(s) 117, 654, 796
BssAI RCCGGY 1 cut(s) 1273
BssECI CCNNGG 4 cut(s) 148, 476, 656, 924
BssT1I CCWWGG 4 cut(s) 148, 476, 656, 924
Bst2UI CCWGG 3 cut(s) 167, 695, 1365
Bst4CI ACNGT 1 cut(s) 716
Bst6I CTCTTC 2 cut(s) 445, 1417
BstAPI GCANNNNNTGC 3 cut(s) 781, 1025, 1309
BstBAI YACGTR 1 cut(s) 944
BstBI TTCGAA 2 cut(s) 448, 571
BstC8I GCNNGC 6 cut(s) 105, 312, 318, 322, 492, 777
BstDEI CTNAG 2 cut(s) 826, 1143
BstDSI CCRYGG 1 cut(s) 476
BstENI CCTNNNNNAGG 1 cut(s) 825
BstF5I GGATG 2 cut(s) 343, 397
BstFNI CGCG 1 cut(s) 206
BstH2I RGCGCY 3 cut(s) 32, 188, 317
BstHHI GCGC 4 cut(s) 31, 187, 206, 316
BstMAI GTCTC 1 cut(s) 73
BstMCI CGRYCG 2 cut(s) 210, 501
BstMWI GCNNNNNNNGC 9 cut(s) 113, 203, 228, 311, 487, 781, 938, 1025, 1309
BstNI CCWGG 3 cut(s) 167, 695, 1365
BstNSI RCATGY 2 cut(s) 23, 271
BstPAI GACNNNNGTC 1 cut(s) 1203
BstSCI CCNGG 3 cut(s) 165, 693, 1363
BstSFI CTRYAG 1 cut(s) 1062
BstSLI GKGCMC 1 cut(s) 943
BstUI CGCG 1 cut(s) 206
BstV1I GCAGC 6 cut(s) 63, 140, 289, 336, 1201, 1242
BstV2I GAAGAC 1 cut(s) 1437
BstX2I RGATCY 4 cut(s) 44, 249, 544, 968
BstYI RGATCY 4 cut(s) 44, 249, 544, 968
BstZI CGGCCG 1 cut(s) 207
Bsu15I ATCGAT 1 cut(s) 279
Bsu36I CCTNAGG 1 cut(s) 826
BsuRI GGCC 4 cut(s) 116, 153, 209, 819
BsuTUI ATCGAT 1 cut(s) 279
BtgI CCRYGG 1 cut(s) 476
BtgZI GCGATG 5 cut(s) 69, 246, 291, 342, 989
BtrI CACGTC 2 cut(s) 371, 541
BtsCI GGATG 2 cut(s) 343, 397
BtsI GCAGTG 1 cut(s) 786
BtsIMutI CAGTG 2 cut(s) 712, 786
BveI ACCTGC 1 cut(s) 923
Cac8I GCNNGC 6 cut(s) 105, 312, 318, 322, 492, 777
CciNI GCGGCCGC 1 cut(s) 207
CfoI GCGC 4 cut(s) 31, 187, 206, 316
Cfr10I RCCGGY 1 cut(s) 1273
Cfr13I GGNCC 2 cut(s) 473, 818
ClaI ATCGAT 1 cut(s) 279
CsiI ACCWGGT 1 cut(s) 693
Csp6I GTAC 5 cut(s) 236, 1001, 1046, 1068, 1277
CspAI ACCGGT 1 cut(s) 1273
CviAII CATG 8 cut(s) 20, 141, 268, 477, 599, 608, 731, 1081
CviQI GTAC 5 cut(s) 236, 1001, 1046, 1068, 1277
DdeI CTNAG 2 cut(s) 826, 1143
DraI TTTAAA 1 cut(s) 688
DriI GACNNNNNGTC 1 cut(s) 268
EaeI YGGCCR 1 cut(s) 207
EagI CGGCCG 1 cut(s) 207
Eam1104I CTCTTC 2 cut(s) 445, 1417
Eam1105I GACNNNNNGTC 1 cut(s) 268
EarI CTCTTC 2 cut(s) 445, 1417
EclXI CGGCCG 1 cut(s) 207
Eco130I CCWWGG 4 cut(s) 148, 476, 656, 924
Eco47I GGWCC 1 cut(s) 473
Eco52I CGGCCG 1 cut(s) 207
Eco57I CTGAAG 1 cut(s) 491
Eco81I CCTNAGG 1 cut(s) 826
Eco88I CYCGRG 1 cut(s) 1039
EcoNI CCTNNNNNAGG 1 cut(s) 825
EcoRII CCWGG 3 cut(s) 165, 693, 1363
EcoT14I CCWWGG 4 cut(s) 148, 476, 656, 924
ErhI CCWWGG 4 cut(s) 148, 476, 656, 924
FaeI CATG 8 cut(s) 23, 144, 271, 480, 602, 611, 734, 1084
FatI CATG 8 cut(s) 19, 140, 267, 476, 598, 607, 730, 1080
FbaI TGATCA 1 cut(s) 709
Fnu4HI GCNGC 8 cut(s) 52, 129, 207, 210, 303, 325, 1190, 1256
FokI GGATG 2 cut(s) 350, 384
Fsp4HI GCNGC 8 cut(s) 52, 129, 207, 210, 303, 325, 1190, 1256
FspBI CTAG 4 cut(s) 321, 657, 1376, 1401
GlaI GCGC 4 cut(s) 30, 186, 205, 315
GluI GCNGC 8 cut(s) 52, 129, 207, 210, 303, 325, 1190, 1256
GsaI CCCAGC 1 cut(s) 222
GsuI CTGGAG 2 cut(s) 813, 1347
HaeII RGCGCY 3 cut(s) 32, 188, 317
HaeIII GGCC 4 cut(s) 116, 153, 209, 819
HapII CCGG 3 cut(s) 48, 177, 1274
HhaI GCGC 4 cut(s) 31, 187, 206, 316
Hin1II CATG 8 cut(s) 23, 144, 271, 480, 602, 611, 734, 1084
Hin6I GCGC 4 cut(s) 29, 185, 204, 314
HinP1I GCGC 4 cut(s) 29, 185, 204, 314
HinfI GANTC 8 cut(s) 360, 441, 453, 573, 976, 1037, 1103, 1139
HpaII CCGG 3 cut(s) 48, 177, 1274
HphI GGTGA 3 cut(s) 517, 1166, 1208
Hpy166II GTNNAC 2 cut(s) 947, 1320
Hpy188III TCNNGA 6 cut(s) 345, 463, 509, 616, 634, 1445
Hpy8I GTNNAC 2 cut(s) 947, 1320
Hpy99I CGWCG 1 cut(s) 372
HpyAV CCTTC 6 cut(s) 455, 460, 831, 871, 1169, 1227
HpyCH4III ACNGT 1 cut(s) 716
HpyCH4IV ACGT 4 cut(s) 238, 370, 540, 943
HpyCH4V TGCA 4 cut(s) 305, 536, 906, 1028
HpyF10VI GCNNNNNNNGC 9 cut(s) 113, 203, 228, 311, 487, 781, 938, 1025, 1309
HpyF3I CTNAG 2 cut(s) 826, 1143
HpySE526I ACGT 4 cut(s) 238, 370, 540, 943
Hsp92II CATG 8 cut(s) 23, 144, 271, 480, 602, 611, 734, 1084
HspAI GCGC 4 cut(s) 29, 185, 204, 314
KpnI GGTACC 1 cut(s) 1049
Ksp22I TGATCA 1 cut(s) 709
LmnI GCTCC 3 cut(s) 499, 1084, 1366
Lsp1109I GCAGC 6 cut(s) 63, 140, 289, 336, 1201, 1242
LweI GCATC 6 cut(s) 152, 184, 271, 314, 531, 1383
MabI ACCWGGT 1 cut(s) 693
MaeI CTAG 4 cut(s) 321, 657, 1376, 1401
MaeII ACGT 4 cut(s) 238, 370, 540, 943
MaeIII GTNAC 4 cut(s) 143, 286, 962, 1196
MboII GAAGA 9 cut(s) 421, 462, 553, 907, 1184, 1205, 1431, 1434, 1442
MflI RGATCY 4 cut(s) 44, 249, 544, 968
MhlI GDGCHC 1 cut(s) 943
MluCI AATT 6 cut(s) 84, 255, 672, 723, 845, 1262
MlyI GAGTC 3 cut(s) 462, 1031, 1112
MmeI TCCRAC 7 cut(s) 94, 146, 285, 297, 388, 943, 1080
MroXI GAANNNNTTC 2 cut(s) 440, 623
MseI TTAA 1 cut(s) 687
MspI CCGG 3 cut(s) 48, 177, 1274
MspR9I CCNGG 3 cut(s) 167, 695, 1365
MvaI CCWGG 3 cut(s) 167, 695, 1365
MvnI CGCG 1 cut(s) 206
MwoI GCNNNNNNNGC 9 cut(s) 113, 203, 228, 311, 487, 781, 938, 1025, 1309
NcoI CCATGG 1 cut(s) 476
NheI GCTAGC 1 cut(s) 320
NlaIII CATG 8 cut(s) 23, 144, 271, 480, 602, 611, 734, 1084
NlaIV GGNNCC 4 cut(s) 251, 654, 859, 1047
NmuCI GTSAC 4 cut(s) 143, 286, 962, 1196
NotI GCGGCCGC 1 cut(s) 207
NspI RCATGY 2 cut(s) 23, 271
NspV TTCGAA 2 cut(s) 448, 571
PciI ACATGT 1 cut(s) 267
PdmI GAANNNNTTC 2 cut(s) 440, 623
PfeI GAWTC 5 cut(s) 360, 441, 573, 976, 1139
PinAI ACCGGT 1 cut(s) 1273
PkrI GCNGC 8 cut(s) 53, 130, 208, 211, 304, 326, 1191, 1257
Ple19I CGATCG 1 cut(s) 501
PleI GAGTC 3 cut(s) 461, 1031, 1111
PpsI GAGTC 3 cut(s) 461, 1031, 1111
Ppu21I YACGTR 1 cut(s) 944
PscI ACATGT 1 cut(s) 267
PshAI GACNNNNGTC 1 cut(s) 1203
Psp6I CCWGG 3 cut(s) 165, 693, 1363
PspFI CCCAGC 1 cut(s) 218
PspGI CCWGG 3 cut(s) 165, 693, 1363
PspN4I GGNNCC 4 cut(s) 251, 654, 859, 1047
PspPI GGNCC 2 cut(s) 473, 818
PsuI RGATCY 4 cut(s) 44, 249, 544, 968
PvuI CGATCG 1 cut(s) 501
RsaI GTAC 5 cut(s) 237, 1002, 1047, 1069, 1278
RsaNI GTAC 5 cut(s) 236, 1001, 1046, 1068, 1277
SaqAI TTAA 1 cut(s) 687
SatI GCNGC 8 cut(s) 52, 129, 207, 210, 303, 325, 1190, 1256
Sau96I GGNCC 2 cut(s) 473, 818
SchI GAGTC 3 cut(s) 462, 1031, 1112
ScrFI CCNGG 3 cut(s) 167, 695, 1365
SduI GDGCHC 1 cut(s) 943
SexAI ACCWGGT 1 cut(s) 693
SfaNI GCATC 6 cut(s) 152, 184, 271, 314, 531, 1383
SfcI CTRYAG 1 cut(s) 1062
SfuI TTCGAA 2 cut(s) 448, 571
SinI GGWCC 1 cut(s) 473
SmlI CTYRAG 2 cut(s) 632, 1088
SmoI CTYRAG 2 cut(s) 632, 1088
SpeI ACTAGT 1 cut(s) 1400
Sse9I AATT 6 cut(s) 84, 255, 672, 723, 845, 1262
SsiI CCGC 3 cut(s) 206, 210, 773
SspI AATATT 2 cut(s) 1288, 1372
SspMI CTAG 4 cut(s) 321, 657, 1376, 1401
StyD4I CCNGG 3 cut(s) 165, 693, 1363
StyI CCWWGG 4 cut(s) 148, 476, 656, 924
TaaI ACNGT 1 cut(s) 716
TaiI ACGT 4 cut(s) 241, 373, 543, 946
TaqI TCGA 5 cut(s) 192, 279, 448, 571, 617
TaqII GACCGA 1 cut(s) 1329
TasI AATT 6 cut(s) 84, 255, 672, 723, 845, 1262
TauI GCSGC 2 cut(s) 209, 212
TfiI GAWTC 5 cut(s) 360, 441, 573, 976, 1139
Tru1I TTAA 1 cut(s) 687
Tru9I TTAA 1 cut(s) 687
TscAI CASTG 2 cut(s) 719, 786
TseFI GTSAC 4 cut(s) 143, 286, 962, 1196
TseI GCWGC 6 cut(s) 51, 128, 302, 324, 1189, 1255
Tsp45I GTSAC 4 cut(s) 143, 286, 962, 1196
TspDTI ATGAA 3 cut(s) 449, 587, 666
TspGWI ACGGA 2 cut(s) 372, 854
TspRI CASTG 2 cut(s) 719, 786
VpaK11BI GGWCC 1 cut(s) 473
XagI CCTNNNNNAGG 1 cut(s) 825
XapI RAATTY 2 cut(s) 672, 845
XceI RCATGY 2 cut(s) 23, 271
XmaJI CCTAGG 1 cut(s) 656
XmnI GAANNNNTTC 2 cut(s) 440, 623
XspI CTAG 4 cut(s) 321, 657, 1376, 1401
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.