Encoded by
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 43 |
| AccII | CGCG | 1 cut(s) | 263 |
| AciI | CCGC | 4 cut(s) | 27, 141, 261, 322 |
| AclWI | GGATC | 1 cut(s) | 92 |
| AcoI | YGGCCR | 3 cut(s) | 69, 414, 424 |
| AdeI | CACNNNGTG | 1 cut(s) | 173 |
| AfeI | AGCGCT | 1 cut(s) | 271 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 347 |
| AjnI | CCWGG | 1 cut(s) | 416 |
| AluBI | AGCT | 1 cut(s) | 112 |
| AluI | AGCT | 1 cut(s) | 112 |
| Alw21I | GWGCWC | 1 cut(s) | 369 |
| AlwI | GGATC | 1 cut(s) | 92 |
| Ama87I | CYCGRG | 1 cut(s) | 362 |
| Aor51HI | AGCGCT | 1 cut(s) | 271 |
| AoxI | GGCC | 8 cut(s) | 69, 288, 332, 349, 406, 414, 419, 424 |
| ApeKI | GCWGC | 1 cut(s) | 138 |
| AspLEI | GCGC | 2 cut(s) | 265, 272 |
| AspS9I | GGNCC | 2 cut(s) | 350, 420 |
| AsuC2I | CCSGG | 3 cut(s) | 326, 353, 423 |
| AsuHPI | GGTGA | 1 cut(s) | 243 |
| AvaI | CYCGRG | 1 cut(s) | 362 |
| BalI | TGGCCA | 1 cut(s) | 416 |
| BanI | GGYRCC | 1 cut(s) | 43 |
| BanII | GRGCYC | 1 cut(s) | 434 |
| BauI | CACGAG | 2 cut(s) | 10, 299 |
| Bbv12I | GWGCWC | 1 cut(s) | 369 |
| BbvI | GCAGC | 1 cut(s) | 150 |
| BccI | CCATC | 1 cut(s) | 71 |
| BceAI | ACGGC | 1 cut(s) | 57 |
| BciT130I | CCWGG | 1 cut(s) | 418 |
| BcnI | CCSGG | 3 cut(s) | 326, 353, 423 |
| BfmI | CTRYAG | 1 cut(s) | 93 |
| BfoI | RGCGCY | 1 cut(s) | 273 |
| BisI | GCNGC | 3 cut(s) | 139, 142, 322 |
| BlpI | GCTNAGC | 1 cut(s) | 266 |
| BlsI | GCNGC | 3 cut(s) | 140, 143, 323 |
| Bme1390I | CCNGG | 4 cut(s) | 326, 353, 418, 423 |
| BmeT110I | CYCGRG | 1 cut(s) | 362 |
| BmgT120I | GGNCC | 2 cut(s) | 350, 420 |
| BmiI | GGNNCC | 1 cut(s) | 45 |
| BmrFI | CCNGG | 4 cut(s) | 326, 353, 418, 423 |
| BmsI | GCATC | 2 cut(s) | 38, 184 |
| Bpu10I | CCTNAGC | 1 cut(s) | 336 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 266 |
| BpuMI | CCSGG | 3 cut(s) | 326, 353, 423 |
| BsaAI | YACGTR | 1 cut(s) | 173 |
| BsaJI | CCNNGG | 2 cut(s) | 133, 208 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 347 |
| BseBI | CCWGG | 1 cut(s) | 418 |
| BseDI | CCNNGG | 2 cut(s) | 133, 208 |
| BseGI | GGATG | 1 cut(s) | 29 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 347 |
| BseRI | GAGGAG | 2 cut(s) | 110, 113 |
| BseX3I | CGGCCG | 1 cut(s) | 69 |
| BseXI | GCAGC | 1 cut(s) | 150 |
| BseYI | CCCAGC | 1 cut(s) | 389 |
| Bsh1236I | CGCG | 1 cut(s) | 263 |
| Bsh1285I | CGRYCG | 1 cut(s) | 72 |
| BshFI | GGCC | 8 cut(s) | 71, 290, 334, 351, 408, 416, 421, 426 |
| BshNI | GGYRCC | 1 cut(s) | 43 |
| BsiEI | CGRYCG | 1 cut(s) | 72 |
| BsiHKAI | GWGCWC | 1 cut(s) | 369 |
| BsiHKCI | CYCGRG | 1 cut(s) | 362 |
| BsiSI | CCGG | 3 cut(s) | 326, 353, 423 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 347 |
| BsnI | GGCC | 8 cut(s) | 71, 290, 334, 351, 408, 416, 421, 426 |
| BsoBI | CYCGRG | 1 cut(s) | 362 |
| Bsp1286I | GDGCHC | 2 cut(s) | 369, 434 |
| Bsp143I | GATC | 1 cut(s) | 97 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 266 |
| Bsp19I | CCATGG | 1 cut(s) | 133 |
| BspACI | CCGC | 4 cut(s) | 27, 141, 261, 322 |
| BspANI | GGCC | 8 cut(s) | 71, 290, 334, 351, 408, 416, 421, 426 |
| BspFNI | CGCG | 1 cut(s) | 263 |
| BspLI | GGNNCC | 1 cut(s) | 45 |
| BspMAI | CTGCAG | 1 cut(s) | 97 |
| BspPI | GGATC | 1 cut(s) | 92 |
| BspT107I | GGYRCC | 1 cut(s) | 43 |
| BssECI | CCNNGG | 2 cut(s) | 133, 208 |
| BssMI | GATC | 1 cut(s) | 97 |
| BssSI | CACGAG | 2 cut(s) | 10, 299 |
| BssT1I | CCWWGG | 2 cut(s) | 133, 208 |
| Bst2BI | CACGAG | 2 cut(s) | 10, 299 |
| Bst2UI | CCWGG | 1 cut(s) | 418 |
| Bst6I | CTCTTC | 1 cut(s) | 25 |
| BstBAI | YACGTR | 1 cut(s) | 173 |
| BstC8I | GCNNGC | 1 cut(s) | 311 |
| BstDEI | CTNAG | 3 cut(s) | 266, 294, 336 |
| BstDSI | CCRYGG | 1 cut(s) | 133 |
| BstF5I | GGATG | 1 cut(s) | 29 |
| BstFNI | CGCG | 1 cut(s) | 263 |
| BstH2I | RGCGCY | 1 cut(s) | 273 |
| BstHHI | GCGC | 2 cut(s) | 265, 272 |
| BstKTI | GATC | 1 cut(s) | 100 |
| BstMBI | GATC | 1 cut(s) | 97 |
| BstMCI | CGRYCG | 1 cut(s) | 72 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 147, 269, 310 |
| BstNI | CCWGG | 1 cut(s) | 418 |
| BstSCI | CCNGG | 4 cut(s) | 324, 351, 416, 421 |
| BstSFI | CTRYAG | 1 cut(s) | 93 |
| BstUI | CGCG | 1 cut(s) | 263 |
| BstV1I | GCAGC | 1 cut(s) | 150 |
| BstX2I | RGATCY | 1 cut(s) | 97 |
| BstYI | RGATCY | 1 cut(s) | 97 |
| BstZI | CGGCCG | 1 cut(s) | 69 |
| BsuRI | GGCC | 8 cut(s) | 71, 290, 334, 351, 408, 416, 421, 426 |
| BtgI | CCRYGG | 1 cut(s) | 133 |
| BtsCI | GGATG | 1 cut(s) | 29 |
| Cac8I | GCNNGC | 1 cut(s) | 311 |
| CfoI | GCGC | 2 cut(s) | 265, 272 |
| Cfr13I | GGNCC | 2 cut(s) | 350, 420 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 168, 203 |
| CviAII | CATG | 3 cut(s) | 134, 305, 330 |
| DdeI | CTNAG | 3 cut(s) | 266, 294, 336 |
| DpnI | GATC | 1 cut(s) | 99 |
| DpnII | GATC | 1 cut(s) | 97 |
| DraIII | CACNNNGTG | 1 cut(s) | 173 |
| EaeI | YGGCCR | 3 cut(s) | 69, 414, 424 |
| EagI | CGGCCG | 1 cut(s) | 69 |
| Eam1104I | CTCTTC | 1 cut(s) | 25 |
| EarI | CTCTTC | 1 cut(s) | 25 |
| EclXI | CGGCCG | 1 cut(s) | 69 |
| Eco130I | CCWWGG | 2 cut(s) | 133, 208 |
| Eco24I | GRGCYC | 1 cut(s) | 434 |
| Eco47III | AGCGCT | 1 cut(s) | 271 |
| Eco52I | CGGCCG | 1 cut(s) | 69 |
| Eco88I | CYCGRG | 1 cut(s) | 362 |
| EcoRII | CCWGG | 1 cut(s) | 416 |
| EcoT14I | CCWWGG | 2 cut(s) | 133, 208 |
| EcoT38I | GRGCYC | 1 cut(s) | 434 |
| ErhI | CCWWGG | 2 cut(s) | 133, 208 |
| FaeI | CATG | 3 cut(s) | 137, 308, 333 |
| FaiI | YATR | 5 cut(s) | 77, 135, 306, 331, 396 |
| FatI | CATG | 3 cut(s) | 133, 304, 329 |
| Fnu4HI | GCNGC | 3 cut(s) | 139, 142, 322 |
| FokI | GGATG | 1 cut(s) | 16 |
| FriOI | GRGCYC | 1 cut(s) | 434 |
| Fsp4HI | GCNGC | 3 cut(s) | 139, 142, 322 |
| GlaI | GCGC | 2 cut(s) | 264, 271 |
| GluI | GCNGC | 3 cut(s) | 139, 142, 322 |
| GsaI | CCCAGC | 1 cut(s) | 393 |
| HaeII | RGCGCY | 1 cut(s) | 273 |
| HaeIII | GGCC | 8 cut(s) | 71, 290, 334, 351, 408, 416, 421, 426 |
| HapII | CCGG | 3 cut(s) | 326, 353, 423 |
| HhaI | GCGC | 2 cut(s) | 265, 272 |
| Hin1II | CATG | 3 cut(s) | 137, 308, 333 |
| Hin6I | GCGC | 2 cut(s) | 263, 270 |
| HinP1I | GCGC | 2 cut(s) | 263, 270 |
| HinfI | GANTC | 1 cut(s) | 155 |
| HpaII | CCGG | 3 cut(s) | 326, 353, 423 |
| HphI | GGTGA | 1 cut(s) | 243 |
| Hpy188I | TCNGA | 2 cut(s) | 102, 231 |
| Hpy188III | TCNNGA | 1 cut(s) | 244 |
| HpyCH4IV | ACGT | 2 cut(s) | 172, 369 |
| HpyCH4V | TGCA | 2 cut(s) | 95, 197 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 147, 269, 310 |
| HpyF3I | CTNAG | 3 cut(s) | 266, 294, 336 |
| HpySE526I | ACGT | 2 cut(s) | 172, 369 |
| Hsp92II | CATG | 3 cut(s) | 137, 308, 333 |
| HspAI | GCGC | 2 cut(s) | 263, 270 |
| Kzo9I | GATC | 1 cut(s) | 97 |
| LpnPI | CCDG | 7 cut(s) | 175, 272, 339, 366, 375, 403, 430 |
| Lsp1109I | GCAGC | 1 cut(s) | 150 |
| LweI | GCATC | 2 cut(s) | 38, 184 |
| MaeII | ACGT | 2 cut(s) | 172, 369 |
| MaeIII | GTNAC | 1 cut(s) | 249 |
| MalI | GATC | 1 cut(s) | 99 |
| MboI | GATC | 1 cut(s) | 97 |
| MboII | GAAGA | 2 cut(s) | 12, 15 |
| MflI | RGATCY | 1 cut(s) | 97 |
| MhlI | GDGCHC | 2 cut(s) | 369, 434 |
| MlsI | TGGCCA | 1 cut(s) | 416 |
| MluNI | TGGCCA | 1 cut(s) | 416 |
| MlyI | GAGTC | 1 cut(s) | 164 |
| MmeI | TCCRAC | 2 cut(s) | 125, 254 |
| MnlI | CCTC | 5 cut(s) | 28, 128, 131, 134, 140 |
| Mox20I | TGGCCA | 1 cut(s) | 416 |
| MscI | TGGCCA | 1 cut(s) | 416 |
| MseI | TTAA | 1 cut(s) | 315 |
| MslI | CAYNNNNRTG | 1 cut(s) | 303 |
| Msp20I | TGGCCA | 1 cut(s) | 416 |
| MspA1I | CMGCKG | 1 cut(s) | 141 |
| MspI | CCGG | 3 cut(s) | 326, 353, 423 |
| MspR9I | CCNGG | 4 cut(s) | 326, 353, 418, 423 |
| MvaI | CCWGG | 1 cut(s) | 418 |
| MvnI | CGCG | 1 cut(s) | 263 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 147, 269, 310 |
| NciI | CCSGG | 3 cut(s) | 326, 353, 423 |
| NcoI | CCATGG | 1 cut(s) | 133 |
| NdeII | GATC | 1 cut(s) | 97 |
| NlaIII | CATG | 3 cut(s) | 137, 308, 333 |
| NlaIV | GGNNCC | 1 cut(s) | 45 |
| NmeAIII | GCCGAG | 1 cut(s) | 47 |
| NmuCI | GTSAC | 1 cut(s) | 249 |
| PkrI | GCNGC | 3 cut(s) | 140, 143, 323 |
| PleI | GAGTC | 1 cut(s) | 163 |
| PpsI | GAGTC | 1 cut(s) | 163 |
| Ppu21I | YACGTR | 1 cut(s) | 173 |
| Psp6I | CCWGG | 1 cut(s) | 416 |
| PspFI | CCCAGC | 1 cut(s) | 389 |
| PspGI | CCWGG | 1 cut(s) | 416 |
| PspN4I | GGNNCC | 1 cut(s) | 45 |
| PspPI | GGNCC | 2 cut(s) | 350, 420 |
| PstI | CTGCAG | 1 cut(s) | 97 |
| PsuI | RGATCY | 1 cut(s) | 97 |
| RseI | CAYNNNNRTG | 1 cut(s) | 303 |
| SaqAI | TTAA | 1 cut(s) | 315 |
| SatI | GCNGC | 3 cut(s) | 139, 142, 322 |
| Sau3AI | GATC | 1 cut(s) | 97 |
| Sau96I | GGNCC | 2 cut(s) | 350, 420 |
| SchI | GAGTC | 1 cut(s) | 164 |
| ScrFI | CCNGG | 4 cut(s) | 326, 353, 418, 423 |
| SduI | GDGCHC | 2 cut(s) | 369, 434 |
| SetI | ASST | 5 cut(s) | 114, 132, 175, 280, 372 |
| SfaNI | GCATC | 2 cut(s) | 38, 184 |
| SfcI | CTRYAG | 1 cut(s) | 93 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 303 |
| SsiI | CCGC | 4 cut(s) | 27, 141, 261, 322 |
| SspI | AATATT | 1 cut(s) | 403 |
| StyD4I | CCNGG | 4 cut(s) | 324, 351, 416, 421 |
| StyI | CCWWGG | 2 cut(s) | 133, 208 |
| TaiI | ACGT | 2 cut(s) | 175, 372 |
| TauI | GCSGC | 2 cut(s) | 144, 324 |
| Tru1I | TTAA | 1 cut(s) | 315 |
| Tru9I | TTAA | 1 cut(s) | 315 |
| TseFI | GTSAC | 1 cut(s) | 249 |
| TseI | GCWGC | 1 cut(s) | 138 |
| Tsp45I | GTSAC | 1 cut(s) | 249 |
| TspDTI | ATGAA | 1 cut(s) | 40 |