Rorug01G0038600

No description available

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
Physical Location & Seq
Forward (+)
6338793 .. 6342972
4180 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug01G0038600.1

Sequence Viewer

Length: 3156 bp
ATGGAGAGCTTCAAATACCTTCATGTCTTGACCCTTCTCCTTTTCACCAACCTTCTCCAATCTACCACTACTGTAAGTTCATTTGGCAATGAAACCGATCACTTGGCTTTGCTAAAATTCAGAGAATCCATAGTCGCCGATCCACAAGGGTTCTTGAACTCATGGAATTACTCCGTTCACTTCTGCAAATGGCAAGGAATTACATGTGGCAGACGGCATCAAAGAGTAACAGCCTTGAATCTACCACACGCTGATTTGCATGGAACCATATCACCTTACATTGGCAACCTCTCCTTTCTCAGGACCTTCGACCTTCTAAACAACAGCCTCTCTGGCAAGATTCCGCAACAAGTTGATCATTTATTCCGACTGAGAGATCTCACTCTCGATTACAACATGTTGGAGGGGGGCATTCCAGTCAACCTGACCTTCTGTGCGGAACTGAGCATCTTAAGTATTGGAGAAAACCGCCTTACCGGCAAAATTCCTTCAGAGATTGGCTCGTTGATGAAACTTGTGCAGCTTAATCTGGAGAAAAACAATCTGACCGGAGGCATCCCAACTTCCTTGGGGAATCTTTCATCAATAATAGACCTTTCCTTGGCATTCAACAATCTGGTAGGCAACGTTCCGGAGGAAATAGGACGATTGAGAAGCTTATCTTTCTTCGCAATTGGTCCCAATAATCTCTCTGGTATGGTCCCTCCCTCTCTTTTCAACATATCAAGTATGTCTGCCTTATCACTTGTAGATAATCAACTTGAGGGCAATATTCCACCTGGAATTGGAGAAAACATGCCTAATCTTCGAAGGGTTGGCATTGCTGGAAATGAATTCTTTGGGAAAATTCCAGCCTCTTTTTCGAATGCTACTCAGCTTCAAAGACTTGATCTAGCCAATAATAATTTCGTGGGAAAAGTTCCAGGAACTTTTGGAGTTCTTCAGGATCTCCAGAAGCTCAGTTTCAGTAACAATACGTTGGGAAGTCATTCGGCTAATGACTTGGAGTTCCTAAAAGCCTTGACAAATTGCAGCAAATTAGAAATCCTTGGTTTGAATTTAAACCATTTTGGAGGTGTTTTACCAAAATCTGTAGCCAATTTGTCAACCCAACTCAGTGGACTCTACCTTGGAAACAATCAAATAACAGGAATGATTCCTGCAGCATTAGAAAATCTAAACAATTTAGTAATTTTGGGGCTGCAGGATAATCTGTTTACAGGTGTCATTCCTACTTATTTTGGGAAGTTTCAGCACCTGCAAGTATTGAGTTTAGAGTATAATAGATTATCAGGACATATCCCGTCTTCCCTAGGAAACCTCACTCAATTGTTTGCACTTCTCTTGTCAGCAAACAAATTACATGGAACCATTCCTCCAAGTATTGGGAACTGCCAACAATTGCAGTACATGGAAATGTCACAGAATAGGCTTGGAGGAGATATACCGCCACAAGTTATAGGTCTTTCCTCCTTATCTATCTTACTCAACTTATCACAAAACTCACTAACAGGCAGTCTGCCTCTGGAAGTAGGTAAGCTAGAGAATATCAATGCACTAGACATTTCTGAAAATAATTTGACAGGAGAAATCCCAGAAACCATTGGAAACTGTCTGAGCATTGAAATTCTTAACCTTCAAGGGAATCTCTTTCAAGGAATCATACCTTCTTCTATGGCTTCCTTGAAAGGTCTTCAGCATTTAGATCTTTCACGGAACAACTTGTCAGGACATACTCCAAAAGACCTACAGAGACTTCGATTCTTGATATATTTGAACCTTTCGTCCAATAACTTGGAGGGTGAGGTACCGAAAGAAGGAGTTTTCCAAAACACAAGTGCAACGTCATTGGATGGAAATACCAAACTTTGTGGTGGTGTTCCGAAATTGCAGCTACCAGAATGCCCCATCAAAGTACCAAAGCAAAGAGAGTTTCATGGTTTCAAACTAAAGTTCACAATTTCTTTAGTCGCCGGATGCTCTCTTCTGTTTGCAGTCATCTTAGCTCTTTATTGGAAGAGAAAAACTCAAAAGAAGAAATCATTATCTGCTGCGTCATCAATCAACTTCCTTTCAAAGGTTTCATACCAGACACTTCATCAAGCTACTGGCGGATTCTCTCCGAGCAATCAAATTGGATCAGGCGGTTTTGGCTTTGTATACAAAGGGATTCTTGATCAAGAAGAAAACAACGTTGTTGCCATAAAGGTCCTCAACCTTCAACATAAAGGAGCTTCCAAGAGTTTTATGGCTGAATGCAATGCACTGAGAAATATCCGGCACAGGAATCTTGTGAAGATCATAACATGTTGCTCCAGTATGGATTACAAGGGTCATGACTTCAAAGCTCTAGTTTTTGAGTATATATCAAATGGAAGTTTAGAGGAGTGGCTGCACAGAGAAAACCAATCAGGGAGTCTGAACCTTCTTCAGAGATTGAATATTGCTATTGATGTGGCTTCTGCATTATGTTATCTTCATGACCATTGTGAACCACAAATTATTCACCGTGACATGAAGCCAAGCAACGTTCTTCTTGACGATGACATGGTTGCTCGTGTATGTGATTTTGGATTAGCAAGACTCATCCCACTGACCACGGACTCCTCTGAAAATCAAAGTACCACAGTTGGGATAAAGGGAACCATTGGCTATGCTGCTCCAGAATATGCAGCTGGTTTTGAGCCATCAAAGCAAGGGGATGTATATAGTTATGGGATCCTTGTGCTGCAGTTATTCACGGGAAGAAGACCCACTGATGAAATGTTTGTAGACGGTTGCAATATCCATACTTTTGTTAAGACGGCCATACAAGGAAGACTTGTGCAAATTGTGGATCCTACTCTTATTGCCACTCTAGAAGAGACTGCAACTTCAACAACAAACAATGAAGTGACCTACATGCGTGGTTACAACAACGAAATCGAAGCTGATGAAGGCAACATTGACAATGAGAATTTAAGCACGATGAACACTTACGTGTGGAAGTGCATACTTCCAACCCTTAAGATTGGACTTGCATGCTCGGAAGAATCACCAAGGAATAGGATGTCTATGGATGAGGTCCACAGGGAACTTCACCATATAAAAAATGCTTACACTCGTGTTGACATCCATCGAGAGGCCAAGAAGAAGCTAAACAAGAGTATGGCATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

1051

Amino Acids

115.51

Weight (kDa)

6.74

Isoelectric Point (pI)

37.14

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 31 - 69 6.4e-10 Leucine rich repeat N-terminal domain
LRR_14 PF23598 92 - 200 1.1e-06 Leucine-rich repeat region
LRR_8 PF13855 395 - 454 1.4e-08 Leucine rich repeat
LRR_14 PF23598 414 - 496 7.9e-07 Leucine-rich repeat region
LRR_14 PF23598 496 - 599 5.1e-06 Leucine-rich repeat region
LRR_8 PF13855 541 - 599 5.9e-09 Leucine rich repeat
Pkinase PF00069 709 - 920 4.4e-41 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 710 - 930 5.7e-42 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000032)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g20531 FvH4_1g22101 FvH4_1g26161 FvH4_2g06802 FvH4_2g07851 FvH4_2g07920 FvH4_2g11481 FvH4_2g14491 FvH4_2g14510 FvH4_3g02671 FvH4_3g10870 FvH4_3g16811 FvH4_3g18871 FvH4_3g20011 FvH4_3g29181 FvH4_3g30101 FvH4_3g33941 FvH4_4g08031 FvH4_4g10192 FvH4_4g20791 FvH4_5g02440 FvH4_5g03261 FvH4_5g15791 FvH4_5g22472 FvH4_5g23680 FvH4_5g26530 FvH4_5g26540 FvH4_5g30241 FvH4_5g32311 FvH4_5g38943 FvH4_6g05152 FvH4_6g10481 FvH4_6g14353 FvH4_6g17850 FvH4_6g19460 FvH4_6g23861 FvH4_6g30881 FvH4_6g31722 FvH4_6g40031 FvH4_6g46031 FvH4_6g49021 FvH4_7g12530 FvH4_7g15960
pyrus_communis pycom09g18450
rosa_chinensis RchiOBHm_Chr1g0341771 RchiOBHm_Chr1g0354791 RchiOBHm_Chr2g0095751 RchiOBHm_Chr5g0030691 RchiOBHm_Chr7g0181741 RchiOBHm_Chr7g0222721 RchiOBHm_Chr7g0243191
rosa_laevigata RLG00000001405 RLG00000001878 RLG00000002053 RLG00000002361 RLG00000003846 RLG00000012639 RLG00000013326 RLG00000014331 RLG00000017340 RLG00000017548 RLG00000018177 RLG00000018372 RLG00000019006 RLG00000019406 RLG00000019522 RLG00000019922 RLG00000020489 RLG00000022399 RLG00000023433 RLG00000027372 RLG00000028576 RLG00000028590 RLG00000028947 RLG00000032552 RLG00000033183 RLG00000033245 RLG00000033730 RLG00000034443 RLG00000034772 RLG00000036008
rosa_multiflora Rmu_co8029972.1_g000001 Rmu_co8044978.1_g000001 Rmu_co8338363.1_g000001 Rmu_co8426431.1_g000002 Rmu_co8457575.1_g000001 Rmu_sc0000010.1_g000025 Rmu_sc0000197.1_g000018 Rmu_sc0000220.1_g000009 Rmu_sc0000221.1_g000012 Rmu_sc0000258.1_g000002 Rmu_sc0000284.1_g000015 Rmu_sc0000303.1_g000021 Rmu_sc0000309.1_g000015 Rmu_sc0000317.1_g000017 Rmu_sc0000355.1_g000003 Rmu_sc0000376.1_g000035 Rmu_sc0000420.1_g000009 Rmu_sc0000493.1_g000019 Rmu_sc0000498.1_g000044 Rmu_sc0000540.1_g000015 Rmu_sc0000554.1_g000031 Rmu_sc0000577.1_g000004 Rmu_sc0000647.1_g000007 Rmu_sc0000703.1_g000002 Rmu_sc0000776.1_g000025 Rmu_sc0000924.1_g000044 Rmu_sc0000940.1_g000034 Rmu_sc0000940.1_g000036 Rmu_sc0000990.1_g000014 Rmu_sc0001004.1_g000018 Rmu_sc0001027.1_g000014 Rmu_sc0001059.1_g000004 Rmu_sc0001089.1_g000021 Rmu_sc0001118.1_g000013 Rmu_sc0001141.1_g000024 Rmu_sc0001154.1_g000002 Rmu_sc0001179.1_g000023 Rmu_sc0001230.1_g000014 Rmu_sc0001298.1_g000042 Rmu_sc0001306.1_g000030 Rmu_sc0001306.1_g000036 Rmu_sc0001341.1_g000007 Rmu_sc0001386.1_g000013 Rmu_sc0001461.1_g000019 Rmu_sc0001461.1_g000047 Rmu_sc0001476.1_g000013 Rmu_sc0001516.1_g000032 Rmu_sc0001780.1_g000007 Rmu_sc0001793.1_g000005 Rmu_sc0001911.1_g000013 Rmu_sc0001962.1_g000011 Rmu_sc0001986.1_g000004 Rmu_sc0002061.1_g000021 Rmu_sc0002119.1_g000024 Rmu_sc0002194.1_g000021 Rmu_sc0002284.1_g000019 Rmu_sc0002316.1_g000014 Rmu_sc0002322.1_g000006 Rmu_sc0002351.1_g000107 Rmu_sc0002387.1_g000008 Rmu_sc0002389.1_g000029 Rmu_sc0002507.1_g000001 Rmu_sc0002589.1_g000038 Rmu_sc0002638.1_g000041 Rmu_sc0002656.1_g000007 Rmu_sc0002882.1_g000030 Rmu_sc0002927.1_g000034 Rmu_sc0003024.1_g000020 Rmu_sc0003032.1_g000027 Rmu_sc0003069.1_g000025 Rmu_sc0003268.1_g000002 Rmu_sc0003296.1_g000007 Rmu_sc0003363.1_g000073 Rmu_sc0003527.1_g000017 Rmu_sc0003638.1_g000007 Rmu_sc0003669.1_g000007 Rmu_sc0003882.1_g000021 Rmu_sc0003941.1_g000004 Rmu_sc0003979.1_g000007 Rmu_sc0003983.1_g000007 Rmu_sc0003989.1_g000017 Rmu_sc0004016.1_g000003 Rmu_sc0004020.1_g000025 Rmu_sc0004094.1_g000016 Rmu_sc0004135.1_g000002 Rmu_sc0004154.1_g000014 Rmu_sc0004316.1_g000002 Rmu_sc0004316.1_g000015 Rmu_sc0004321.1_g000013 Rmu_sc0004467.1_g000005 Rmu_sc0004517.1_g000007 Rmu_sc0004642.1_g000012 Rmu_sc0004729.1_g000024 Rmu_sc0004757.1_g000018 Rmu_sc0004788.1_g000003 Rmu_sc0004835.1_g000026 Rmu_sc0004889.1_g000019 Rmu_sc0004991.1_g000009 Rmu_sc0005045.1_g000004 Rmu_sc0005079.1_g000004 Rmu_sc0005083.1_g000008 Rmu_sc0005170.1_g000002 Rmu_sc0005190.1_g000009 Rmu_sc0005217.1_g000010 Rmu_sc0005234.1_g000011 Rmu_sc0005608.1_g000016 Rmu_sc0005802.1_g000029 Rmu_sc0005810.1_g000006 Rmu_sc0005904.1_g000006 Rmu_sc0005967.1_g000012 Rmu_sc0006028.1_g000027 Rmu_sc0006059.1_g000040 Rmu_sc0006423.1_g000002 Rmu_sc0006467.1_g000001 Rmu_sc0006470.1_g000004 Rmu_sc0006598.1_g000003 Rmu_sc0006599.1_g000004 Rmu_sc0006632.1_g000021 Rmu_sc0006707.1_g000008 Rmu_sc0006791.1_g000008 Rmu_sc0006835.1_g000016 Rmu_sc0007100.1_g000002 Rmu_sc0007115.1_g000009 Rmu_sc0007362.1_g000012 Rmu_sc0007461.1_g000004 Rmu_sc0007474.1_g000001 Rmu_sc0007681.1_g000011 Rmu_sc0007697.1_g000003 Rmu_sc0007704.1_g000001 Rmu_sc0007722.1_g000016 Rmu_sc0007843.1_g000001 Rmu_sc0007856.1_g000009 Rmu_sc0008328.1_g000007 Rmu_sc0008780.1_g000005 Rmu_sc0009185.1_g000011 Rmu_sc0009599.1_g000021 Rmu_sc0009881.1_g000002 Rmu_sc0009891.1_g000002 Rmu_sc0010357.1_g000003 Rmu_sc0010781.1_g000005 Rmu_sc0011133.1_g000005 Rmu_sc0012334.1_g000001 Rmu_sc0012569.1_g000015 Rmu_sc0012984.1_g000001 Rmu_sc0013508.1_g000001 Rmu_sc0013550.1_g000005 Rmu_sc0013730.1_g000001 Rmu_sc0013945.1_g000001 Rmu_sc0013945.1_g000003 Rmu_sc0014005.1_g000005 Rmu_sc0014111.1_g000009 Rmu_sc0014111.1_g000010 Rmu_sc0014203.1_g000025 Rmu_sc0014839.1_g000002 Rmu_sc0015410.1_g000001 Rmu_sc0015513.1_g000003 Rmu_sc0015791.1_g000008 Rmu_sc0016657.1_g000004 Rmu_sc0017187.1_g000002 Rmu_sc0017400.1_g000001 Rmu_sc0017895.1_g000006 Rmu_sc0018221.1_g000008 Rmu_sc0018825.1_g000002 Rmu_sc0019047.1_g000001 Rmu_sc0019077.1_g000001 Rmu_sc0019171.1_g000001 Rmu_sc0019299.1_g000002 Rmu_sc0020342.1_g000008 Rmu_sc0020688.1_g000002 Rmu_sc0020688.1_g000003 Rmu_sc0021871.1_g000012 Rmu_sc0022925.1_g000001 Rmu_sc0023965.1_g000005 Rmu_sc0024968.1_g000001 Rmu_sc0024969.1_g000001 Rmu_sc0025035.1_g000002 Rmu_sc0025167.1_g000005 Rmu_sc0025567.1_g000001 Rmu_sc0026096.1_g000001 Rmu_sc0026586.1_g000001 Rmu_sc0028358.1_g000002 Rmu_sc0032171.1_g000001 Rmu_sc0034632.1_g000001 Rmu_sc0034633.1_g000001 Rmu_sc0035481.1_g000001 Rmu_sc0036303.1_g000001 Rmu_sc0039774.1_g000001 Rmu_sc0040023.1_g000002 Rmu_sc0040790.1_g000001 Rmu_sc0041574.1_g000001 Rmu_sc0042768.1_g000003 Rmu_ssc0000038.1_g000016 Rmu_ssc0000062.1_g000035 Rmu_ssc0000083.1_g000009 Rmu_ssc0000093.1_g000006 Rmu_ssc0000112.1_g000023 Rmu_ssc0000155.1_g000007 Rmu_ssc0000171.1_g000017 Rmu_ssc0000196.1_g000017 Rmu_ssc0000257.1_g000027 Rmu_ssc0000323.1_g000023 Rmu_ssc0000440.1_g000011 Rmu_ssc0000454.1_g000021 Rmu_ssc0000473.1_g000011
rosa_roxburghii Rroxscaffold_1G00014010 Rroxscaffold_1G00039470 Rroxscaffold_1G00045350 Rroxscaffold_2G00082440 Rroxscaffold_2G00096630 Rroxscaffold_2G00100560 Rroxscaffold_2G00102600 Rroxscaffold_2G00117720 Rroxscaffold_2G00120390 Rroxscaffold_2G00126010 Rroxscaffold_3G00220680 Rroxscaffold_3G00241760 Rroxscaffold_4G00309670 Rroxscaffold_4G00312380 Rroxscaffold_5G00339950 Rroxscaffold_5G00361980 Rroxscaffold_5G00370500 Rroxscaffold_5G00376480 Rroxscaffold_5G00384070 Rroxscaffold_6G00393690 Rroxscaffold_6G00396520 Rroxscaffold_6G00396850 Rroxscaffold_6G00404790 Rroxscaffold_7G00177690 Rroxscaffold_7G00178170 Rroxscaffold_7G00194330 Rroxscaffold_7G00197090 Rroxscaffold_9G00437910
rosa_rugosa Rorug01G0010100 Rorug01G0035300 Rorug01G0038600 Rorug01G0038700 Rorug01G0050300 Rorug01G0143800.1 Rorug01G0211700 Rorug01G0266600 Rorug01G0268800 Rorug01G0301200 Rorug02G0139800 Rorug02G0247100 Rorug02G0247100 Rorug02G0276800 Rorug02G0283300 Rorug02G0289800 Rorug02G0326700 Rorug02G0368100 Rorug02G0427000 Rorug02G0439100 Rorug02G0611200 Rorug02G0626600 Rorug03G0049100 Rorug03G0108000 Rorug03G0118600 Rorug03G0174300.1 Rorug03G0182300 Rorug03G0189800 Rorug03G0207000 Rorug03G0220700 Rorug03G0229400 Rorug03G0253700 Rorug03G0276500 Rorug03G0283300.1 Rorug03G0283500 Rorug03G0283600 Rorug03G0299600 Rorug04G0052200 Rorug04G0052300 Rorug04G0115800 Rorug04G0159700 Rorug04G0170900 Rorug04G0178100 Rorug04G0250800 Rorug04G0317200 Rorug04G0409500 Rorug05G0022500 Rorug05G0134900 Rorug05G0144800 Rorug05G0158200 Rorug05G0168300 Rorug05G0168400 Rorug05G0168600 Rorug05G0229800 Rorug05G0259100 Rorug05G0285700 Rorug05G0294600 Rorug05G0306400 Rorug05G0335300 Rorug05G0390100 Rorug05G0392900 Rorug05G0407100 Rorug05G0416600 Rorug05G0536900 Rorug05G0550300 Rorug06G0040900 Rorug06G0042800 Rorug06G0093000 Rorug06G0110700 Rorug06G0115600 Rorug06G0205700 Rorug07G0016900.1 Rorug07G0017000 Rorug07G0095200 Rorug07G0106400 Rorug07G0116400 Rorug07G0127300 Rorug07G0151100 Rorug07G0151200 Rorug07G0178200 Rorug07G0224300 Rorug07G0224400 Rorug07G0226400 Rorug07G0258200 Rorug07G0328000 RorugPtG0002700.1
rosa_samantha Rh1BG231600 Rh1BG235500 Rh1DG259300 Rh2AG044200 Rh2AG095600 Rh2AG164800 Rh2AG361400 Rh2AG370600 Rh2AG487800 Rh2AG620400 Rh2BG171900 Rh2BG244600 Rh2BG500300 Rh2CG189500 Rh2CG317600 Rh2CG374400 Rh2CG474300 Rh2DG170300 Rh2DG374800 Rh2DG511500 Rh3AG273400 Rh3AG331300 Rh3CG203900 Rh3CG222200 Rh3CG253800 Rh3CG269900 Rh3DG073800 Rh3DG208100 Rh3DG224000 Rh3DG265900 Rh4AG217200 Rh4BG076000 Rh4BG113200 Rh4BG240700 Rh4BG414300 Rh4CG266600 Rh4CG307600 Rh5BG088500 Rh5BG469000 Rh5CG284400 Rh5CG491200 Rh5CG557400 Rh5DG399000 Rh6AG457400 Rh6BG339800 Rh6BG443700 Rh6CG115400 Rh6CG471500 Rh6DG390100 Rh6DG457900 Rh7AG372100 Rh7AG429800 Rh7AG484600 Rh7BG176400 Rh7BG233900 Rh7BG244400 Rh7BG279800 Rh7BG285100 Rh7CG172200 Rh7CG390500 Rh7CG502600 Rh7CG518200 Rh7DG252500 Rh7DG294200 Rh7DG376400 Rh7DG390100
rosa_wichuraiana Rw0G001650

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1266
Acc36I ACCTGC 1 cut(s) 1266
Acc65I GGTACC 1 cut(s) 1807
AccB1I GGYRCC 1 cut(s) 1807
AccB7I CCANNNNNTGG 1 cut(s) 1385
AccI GTMKAC 2 cut(s) 2160, 2772
AccIII TCCGGA 1 cut(s) 631
AciI CCGC 6 cut(s) 344, 437, 469, 1448, 2112, 2145
AclI AACGTT 3 cut(s) 627, 2193, 2529
AclWI GGATC 7 cut(s) 134, 954, 2146, 2713, 2726, 2831, 2844
AcoI YGGCCR 1 cut(s) 2805
AcsI RAATTY 7 cut(s) 116, 483, 833, 846, 1057, 1626, 2956
AcuI CTGAAG 4 cut(s) 474, 926, 1679, 2414
AfaI GTAC 4 cut(s) 1409, 1809, 1917, 2623
AfiI CCNNNNNNNGG 9 cut(s) 281, 300, 601, 785, 1385, 1817, 2077, 2631, 3121
AflII CTTAAG 2 cut(s) 451, 3005
AflIII ACRYGT 4 cut(s) 203, 396, 2306, 2979
AjnI CCWGG 2 cut(s) 778, 922
AjuI GAANNNNNNNTTGG 2 cut(s) 890, 922
AleI CACNNNNGTG 1 cut(s) 2978
AloI GAACNNNNNNTCC 4 cut(s) 1360, 1392, 1769, 1801
Alw26I GTCTC 2 cut(s) 1747, 2858
AlwI GGATC 7 cut(s) 134, 954, 2146, 2713, 2726, 2831, 2844
AlwNI CAGNNNCTG 1 cut(s) 1258
Aor13HI TCCGGA 1 cut(s) 631
AoxI GGCC 2 cut(s) 2805, 3123
ApoI RAATTY 7 cut(s) 116, 483, 833, 846, 1057, 1626, 2956
Asp700I GAANNNNTTC 1 cut(s) 988
Asp718I GGTACC 1 cut(s) 1807
AspA2I CCTAGG 1 cut(s) 1312
AspS9I GGNCC 5 cut(s) 303, 677, 700, 2209, 3064
AsuHPI GGTGA 6 cut(s) 37, 264, 1814, 2498, 3027, 3071
AsuII TTCGAA 2 cut(s) 808, 863
AvaII GGWCC 5 cut(s) 303, 677, 700, 2209, 3064
AvrII CCTAGG 1 cut(s) 1312
BamHI GGATCC 2 cut(s) 2718, 2836
BanI GGYRCC 1 cut(s) 1807
BauI CACGAG 2 cut(s) 2556, 3102
BbsI GAAGAC 4 cut(s) 1299, 1685, 2755, 2824
BccI CCATC 4 cut(s) 1847, 1916, 2695, 3123
BceAI ACGGC 2 cut(s) 230, 2820
BciT130I CCWGG 2 cut(s) 780, 924
BclI TGATCA 2 cut(s) 355, 2176
BcoDI GTCTC 2 cut(s) 1747, 2858
BfaI CTAG 6 cut(s) 893, 1313, 1541, 1559, 2351, 2858
BfmI CTRYAG 5 cut(s) 1092, 1161, 1202, 1748, 2729
BfrI CTTAAG 2 cut(s) 451, 3005
BfuAI ACCTGC 1 cut(s) 1266
BglI GCCNNNNNGGC 2 cut(s) 333, 477
BglII AGATCT 2 cut(s) 376, 1705
BlnI CCTAGG 1 cut(s) 1312
Bme1390I CCNGG 2 cut(s) 780, 924
Bme18I GGWCC 5 cut(s) 303, 677, 700, 2209, 3064
BmgT120I GGNCC 5 cut(s) 303, 677, 700, 2209, 3064
BmiI GGNNCC 8 cut(s) 265, 679, 702, 1369, 1809, 2644, 2720, 2838
BmrFI CCNGG 2 cut(s) 780, 924
BmsI GCATC 4 cut(s) 226, 456, 564, 1967
BpiI GAAGAC 4 cut(s) 1299, 1685, 2755, 2824
BplI GAGNNNNNCTC 4 cut(s) 485, 517, 2011, 2043
BpmI CTGGAG 4 cut(s) 551, 935, 2299, 2646
Bpu14I TTCGAA 2 cut(s) 808, 863
BpuEI CTTGAG 1 cut(s) 782
BsaAI YACGTR 1 cut(s) 2980
BsaJI CCNNGG 7 cut(s) 567, 600, 1048, 1129, 1312, 2598, 3038
BsaWI WCCGGW 2 cut(s) 548, 631
BsaXI ACNNNNNCTCC 2 cut(s) 1360, 1390
Bsc4I CCNNNNNNNGG 9 cut(s) 281, 300, 601, 785, 1385, 1817, 2077, 2631, 3121
Bse118I RCCGGY 1 cut(s) 476
Bse1I ACTGG 3 cut(s) 416, 2113, 2316
Bse3DI GCAATG 3 cut(s) 94, 819, 2266
BseAI TCCGGA 1 cut(s) 631
BseBI CCWGG 2 cut(s) 780, 924
BseDI CCNNGG 7 cut(s) 567, 600, 1048, 1129, 1312, 2598, 3038
BseGI GGATG 8 cut(s) 555, 1858, 1982, 2586, 2707, 3054, 3064, 3111
BseLI CCNNNNNNNGG 9 cut(s) 281, 300, 601, 785, 1385, 1817, 2077, 2631, 3121
BseMI GCAATG 3 cut(s) 94, 819, 2266
BseMII CTCAG 8 cut(s) 313, 362, 434, 887, 973, 1129, 1607, 2258
BseNI ACTGG 3 cut(s) 416, 2113, 2316
BseRI GAGGAG 3 cut(s) 1452, 2399, 2596
BsgI GTGCAG 2 cut(s) 539, 2378
BshFI GGCC 2 cut(s) 2807, 3125
BshNI GGYRCC 1 cut(s) 1807
BsiSI CCGG 5 cut(s) 477, 549, 632, 1974, 2278
BslFI GGGAC 2 cut(s) 663, 686
BslI CCNNNNNNNGG 9 cut(s) 281, 300, 601, 785, 1385, 1817, 2077, 2631, 3121
BsmAI GTCTC 2 cut(s) 1747, 2858
BsmFI GGGAC 2 cut(s) 663, 686
BsmI GAATGC 5 cut(s) 411, 605, 871, 1907, 2261
BsnI GGCC 2 cut(s) 2807, 3125
Bsp119I TTCGAA 2 cut(s) 808, 863
Bsp13I TCCGGA 1 cut(s) 631
BspACI CCGC 6 cut(s) 344, 437, 469, 1448, 2112, 2145
BspANI GGCC 2 cut(s) 2807, 3125
BspCNI CTCAG 8 cut(s) 312, 363, 435, 886, 972, 1128, 1608, 2259
BspEI TCCGGA 1 cut(s) 631
BspHI TCATGA 2 cut(s) 2335, 2479
BspLI GGNNCC 8 cut(s) 265, 679, 702, 1369, 1809, 2644, 2720, 2838
BspMAI CTGCAG 3 cut(s) 1165, 1206, 2733
BspMI ACCTGC 1 cut(s) 1266
BspPI GGATC 7 cut(s) 134, 954, 2146, 2713, 2726, 2831, 2844
BspT104I TTCGAA 2 cut(s) 808, 863
BspT107I GGYRCC 1 cut(s) 1807
BspTI CTTAAG 2 cut(s) 451, 3005
BsrDI GCAATG 3 cut(s) 94, 819, 2266
BsrFI RCCGGY 1 cut(s) 476
BsrI ACTGG 3 cut(s) 416, 2113, 2316
BssAI RCCGGY 1 cut(s) 476
BssECI CCNNGG 7 cut(s) 567, 600, 1048, 1129, 1312, 2598, 3038
BssNAI GTATAC 1 cut(s) 2161
BssSI CACGAG 2 cut(s) 2556, 3102
BssT1I CCWWGG 6 cut(s) 567, 600, 1048, 1129, 1312, 3038
Bst1107I GTATAC 1 cut(s) 2161
Bst2BI CACGAG 2 cut(s) 2556, 3102
Bst2UI CCWGG 2 cut(s) 780, 924
Bst4CI ACNGT 5 cut(s) 73, 1613, 2510, 2629, 2777
Bst6I CTCTTC 3 cut(s) 1989, 2012, 2856
BstAFI CTTAAG 2 cut(s) 451, 3005
BstBAI YACGTR 1 cut(s) 2980
BstBI TTCGAA 2 cut(s) 808, 863
BstC8I GCNNGC 1 cut(s) 3022
BstDEI CTNAG 9 cut(s) 299, 371, 443, 873, 959, 1115, 1616, 2002, 2267
BstDSI CCRYGG 1 cut(s) 2598
BstENI CCTNNNNNAGG 2 cut(s) 298, 2075
BstF5I GGATG 8 cut(s) 555, 1858, 1982, 2586, 2707, 3054, 3064, 3111
BstMAI GTCTC 2 cut(s) 1747, 2858
BstMWI GCNNNNNNNGC 4 cut(s) 333, 477, 2151, 2692
BstNI CCWGG 2 cut(s) 780, 924
BstNSI RCATGY 6 cut(s) 207, 400, 799, 2310, 2905, 3024
BstSCI CCNGG 2 cut(s) 778, 922
BstSFI CTRYAG 5 cut(s) 1092, 1161, 1202, 1748, 2729
BstV2I GAAGAC 4 cut(s) 1299, 1685, 2755, 2824
BstX2I RGATCY 5 cut(s) 376, 946, 1705, 2718, 2836
BstXI CCANNNNNNTGG 2 cut(s) 1118, 1795
BstYI RGATCY 5 cut(s) 376, 946, 1705, 2718, 2836
BstZ17I GTATAC 1 cut(s) 2161
BsuRI GGCC 2 cut(s) 2807, 3125
BtgI CCRYGG 1 cut(s) 2598
BtsCI GGATG 8 cut(s) 555, 1858, 1982, 2586, 2707, 3054, 3064, 3111
BtsIMutI CAGTG 4 cut(s) 1123, 2264, 2591, 2754
BveI ACCTGC 1 cut(s) 1266
Cac8I GCNNGC 1 cut(s) 3022
CaiI CAGNNNCTG 1 cut(s) 1258
CciI TCATGA 2 cut(s) 2335, 2479
Cfr10I RCCGGY 1 cut(s) 476
Cfr13I GGNCC 5 cut(s) 303, 677, 700, 2209, 3064
CseI GACGC 1 cut(s) 2043
Csp6I GTAC 4 cut(s) 1408, 1808, 1916, 2622
CspCI CAANNNNNGTGG 2 cut(s) 1852, 1887
CviQI GTAC 4 cut(s) 1408, 1808, 1916, 2622
DdeI CTNAG 9 cut(s) 299, 371, 443, 873, 959, 1115, 1616, 2002, 2267
DraI TTTAAA 1 cut(s) 1062
EaeI YGGCCR 1 cut(s) 2805
Eam1104I CTCTTC 3 cut(s) 1989, 2012, 2856
EarI CTCTTC 3 cut(s) 1989, 2012, 2856
EciI GGCGGA 1 cut(s) 2127
Eco130I CCWWGG 6 cut(s) 567, 600, 1048, 1129, 1312, 3038
Eco47I GGWCC 5 cut(s) 303, 677, 700, 2209, 3064
Eco57I CTGAAG 4 cut(s) 474, 926, 1679, 2414
EcoNI CCTNNNNNAGG 2 cut(s) 298, 2075
EcoO109I RGGNCCY 2 cut(s) 303, 2209
EcoRI GAATTC 1 cut(s) 833
EcoRII CCWGG 2 cut(s) 778, 922
EcoT14I CCWWGG 6 cut(s) 567, 600, 1048, 1129, 1312, 3038
ErhI CCWWGG 6 cut(s) 567, 600, 1048, 1129, 1312, 3038
FalI AAGNNNNNCTT 6 cut(s) 646, 678, 2157, 2189, 2805, 2837
FaqI GGGAC 2 cut(s) 663, 686
FbaI TGATCA 2 cut(s) 355, 2176
FblI GTMKAC 2 cut(s) 2160, 2772
FokI GGATG 8 cut(s) 542, 1865, 1989, 2573, 2714, 3061, 3071, 3098
FspBI CTAG 6 cut(s) 893, 1313, 1541, 1559, 2351, 2858
GsuI CTGGAG 4 cut(s) 551, 935, 2299, 2646
HaeIII GGCC 2 cut(s) 2807, 3125
HapII CCGG 5 cut(s) 477, 549, 632, 1974, 2278
HgaI GACGC 1 cut(s) 2043
HincII GTYRAC 3 cut(s) 421, 1107, 3109
HindII GTYRAC 3 cut(s) 421, 1107, 3109
HindIII AAGCTT 1 cut(s) 655
HpaII CCGG 5 cut(s) 477, 549, 632, 1974, 2278
HphI GGTGA 6 cut(s) 37, 264, 1814, 2498, 3027, 3071
HpyCH4III ACNGT 5 cut(s) 73, 1613, 2510, 2629, 2777
HpyCH4IV ACGT 6 cut(s) 627, 977, 1844, 2193, 2529, 2979
HpyF10VI GCNNNNNNNGC 4 cut(s) 333, 477, 2151, 2692
HpyF3I CTNAG 9 cut(s) 299, 371, 443, 873, 959, 1115, 1616, 2002, 2267
HpySE526I ACGT 6 cut(s) 627, 977, 1844, 2193, 2529, 2979
Kpn2I TCCGGA 1 cut(s) 631
KpnI GGTACC 1 cut(s) 1811
Ksp22I TGATCA 2 cut(s) 355, 2176
LmnI GCTCC 3 cut(s) 2231, 2318, 2665
LweI GCATC 4 cut(s) 226, 456, 564, 1967
MaeI CTAG 6 cut(s) 893, 1313, 1541, 1559, 2351, 2858
MaeII ACGT 6 cut(s) 627, 977, 1844, 2193, 2529, 2979
MaeIII GTNAC 6 cut(s) 226, 968, 1419, 2510, 2893, 2909
MfeI CAATTG 3 cut(s) 672, 1328, 1400
MflI RGATCY 5 cut(s) 376, 946, 1705, 2718, 2836
MlyI GAGTC 4 cut(s) 1116, 2425, 2577, 2597
MmeI TCCRAC 3 cut(s) 381, 391, 3023
MroI TCCGGA 1 cut(s) 631
MroXI GAANNNNTTC 1 cut(s) 988
MseI TTAA 7 cut(s) 452, 525, 1061, 1632, 2799, 2960, 3006
MslI CAYNNNNRTG 2 cut(s) 1415, 2978
MspA1I CMGCKG 1 cut(s) 2675
MspCI CTTAAG 2 cut(s) 451, 3005
MspI CCGG 5 cut(s) 477, 549, 632, 1974, 2278
MspR9I CCNGG 2 cut(s) 780, 924
MunI CAATTG 3 cut(s) 672, 1328, 1400
Mva1269I GAATGC 5 cut(s) 411, 605, 871, 1907, 2261
MvaI CCWGG 2 cut(s) 780, 924
MwoI GCNNNNNNNGC 4 cut(s) 333, 477, 2151, 2692
NlaIV GGNNCC 8 cut(s) 265, 679, 702, 1369, 1809, 2644, 2720, 2838
NmuCI GTSAC 3 cut(s) 1419, 2510, 2893
NspI RCATGY 6 cut(s) 207, 400, 799, 2310, 2905, 3024
NspV TTCGAA 2 cut(s) 808, 863
OliI CACNNNNGTG 1 cut(s) 2978
PaeI GCATGC 1 cut(s) 3024
PagI TCATGA 2 cut(s) 2335, 2479
PaqCI CACCTGC 1 cut(s) 1266
PciI ACATGT 3 cut(s) 203, 396, 2306
PctI GAATGC 5 cut(s) 411, 605, 871, 1907, 2261
PdmI GAANNNNTTC 1 cut(s) 988
PflMI CCANNNNNTGG 1 cut(s) 1385
PfoI TCCNGGA 1 cut(s) 922
PleI GAGTC 4 cut(s) 1116, 2424, 2577, 2597
PpsI GAGTC 4 cut(s) 1116, 2424, 2577, 2597
Ppu21I YACGTR 1 cut(s) 2980
PpuMI RGGWCCY 2 cut(s) 303, 2209
PscI ACATGT 3 cut(s) 203, 396, 2306
Psp1406I AACGTT 3 cut(s) 627, 2193, 2529
Psp5II RGGWCCY 2 cut(s) 303, 2209
Psp6I CCWGG 2 cut(s) 778, 922
PspGI CCWGG 2 cut(s) 778, 922
PspN4I GGNNCC 8 cut(s) 265, 679, 702, 1369, 1809, 2644, 2720, 2838
PspPI GGNCC 5 cut(s) 303, 677, 700, 2209, 3064
PspPPI RGGWCCY 2 cut(s) 303, 2209
PsrI GAACNNNNNNTAC 2 cut(s) 612, 644
PstI CTGCAG 3 cut(s) 1165, 1206, 2733
PstNI CAGNNNCTG 1 cut(s) 1258
PsuI RGATCY 5 cut(s) 376, 946, 1705, 2718, 2836
PvuII CAGCTG 1 cut(s) 2675
RsaI GTAC 4 cut(s) 1409, 1809, 1917, 2623
RsaNI GTAC 4 cut(s) 1408, 1808, 1916, 2622
RseI CAYNNNNRTG 2 cut(s) 1415, 2978
SaqAI TTAA 7 cut(s) 452, 525, 1061, 1632, 2799, 2960, 3006
Sau96I GGNCC 5 cut(s) 303, 677, 700, 2209, 3064
SchI GAGTC 4 cut(s) 1116, 2425, 2577, 2597
ScrFI CCNGG 2 cut(s) 780, 924
SfaNI GCATC 4 cut(s) 226, 456, 564, 1967
SfcI CTRYAG 5 cut(s) 1092, 1161, 1202, 1748, 2729
SfuI TTCGAA 2 cut(s) 808, 863
SinI GGWCC 5 cut(s) 303, 677, 700, 2209, 3064
SmiMI CAYNNNNRTG 2 cut(s) 1415, 2978
SmlI CTYRAG 3 cut(s) 451, 761, 3005
SmoI CTYRAG 3 cut(s) 451, 761, 3005
SphI GCATGC 1 cut(s) 3024
SsiI CCGC 6 cut(s) 344, 437, 469, 1448, 2112, 2145
SspI AATATT 2 cut(s) 772, 2443
SspMI CTAG 6 cut(s) 893, 1313, 1541, 1559, 2351, 2858
StyD4I CCNGG 2 cut(s) 778, 922
StyI CCWWGG 6 cut(s) 567, 600, 1048, 1129, 1312, 3038
TaaI ACNGT 5 cut(s) 73, 1613, 2510, 2629, 2777
TaiI ACGT 6 cut(s) 630, 980, 1847, 2196, 2532, 2982
TaqI TCGA 7 cut(s) 309, 387, 808, 863, 1759, 2925, 3118
TatI WGTACW 1 cut(s) 1407
Tru1I TTAA 7 cut(s) 452, 525, 1061, 1632, 2799, 2960, 3006
Tru9I TTAA 7 cut(s) 452, 525, 1061, 1632, 2799, 2960, 3006
TscAI CASTG 4 cut(s) 1123, 2271, 2598, 2761
TseFI GTSAC 3 cut(s) 1419, 2510, 2893
Tsp45I GTSAC 3 cut(s) 1419, 2510, 2893
TspGWI ACGGA 3 cut(s) 163, 1729, 2615
TspRI CASTG 4 cut(s) 1123, 2271, 2598, 2761
Van91I CCANNNNNTGG 1 cut(s) 1385
Vha464I CTTAAG 2 cut(s) 451, 3005
VpaK11BI GGWCC 5 cut(s) 303, 677, 700, 2209, 3064
XagI CCTNNNNNAGG 2 cut(s) 298, 2075
XapI RAATTY 7 cut(s) 116, 483, 833, 846, 1057, 1626, 2956
XbaI TCTAGA 1 cut(s) 2857
XceI RCATGY 6 cut(s) 207, 400, 799, 2310, 2905, 3024
XcmI CCANNNNNNNNNTGG 1 cut(s) 2245
XmaJI CCTAGG 1 cut(s) 1312
XmiI GTMKAC 2 cut(s) 2160, 2772
XmnI GAANNNNTTC 1 cut(s) 988
XspI CTAG 6 cut(s) 893, 1313, 1541, 1559, 2351, 2858
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.