Rmu_sc0001306.1_g000036

Fruit protein

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001306.1
Physical Location & Seq
Forward (+)
110514 .. 118381
7868 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001306.1_g000036.1.cds

Sequence Viewer

Length: 1551 bp
atgtcaacctcttctggcattgataatgtcacagcaagctttgcagcttcactggctttggctggtcgcttatgggaagcactgcagcgccacttaattctcgatcaggcttttttgcttgctcgaccgctgactaacaaaccggttgtggccatggatctgcacagccattttcgaaggatttgtgtccttgacagaatgttcaaggtccaagaacgtatacaaggaagatttgtgtttgctttcgatctcaaaaaggatcaaaacaaggttttgttgggaggtccgtggtatttcaatttagccccaatgatcattcaggcgtatgaaggactagtgaaccataatacggtggaaatggagtcccttttcttctgggtcaagatcgacaatattcctcttgcaatggaagtcaagaccaccaccatcaacgtggcttctgttgcaatgatcccagttgaggagcagccactggaaccactgaagcgacaacgccttccttcacgtttctcttcaccaaagaaatggaagtttctgatggatgaattcaaagacaatactgtgcccacaaagaaggtaaaaatttctgcttttccattcaatgctaaatcactttgtttagttgagactcgtagtggtatgatagtgccagcggaggtcatgatgcccaaggatggagggcaagctgcaaagactgataatataatcccgagtctcgaaggttcttatcttcatcgttctcttccctcactcctcttctctcaaacagaatccttttgcttcatggtacccatcgctgagctaacccaggtcacagggataggcttcgagattgatcagatcgaaccgccagagaattatcctacatttcttattttcacaacgggatctggaatcaggtctctgattgtgtcagggtttaatgctgacaagggatccgacgtgaaactcttctatgggccagaaatcttaacagaatggcttatcgatcaggtctgtggtcaatttggacttactgtgtttagtggagggctggagagagaatcaagaagagtagtacatggtggagagatgagttcagccttggcaacagccccagttgcaatagatttgttggttggcaaaattgttggcattcttgagaacaaagcatccttcactgccgggattcatgatcaagttgatgagattaagctggatctggaaaaaaggcatttcccatctttgtgctcaatacaacagcagaggaatatcaattgcccagaactagacataattaaagccataagcgttctctgcatgactgcatgcaagaagataaagaatattgagaatcatgcagaggacttaatggctgtgaagtctactgcagctcagcaaaatgaggagttaaagaccgtcaaagctggtgcagctaagcaaaatgaagagttagaggcagtgaaggctagagccactcaacaaaatgaagagttggaggcactaaaggcaagacaaaatcagaccgacacacttttacttaaattgatggcacaattatcccaaaactaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

516

Amino Acids

57.44

Weight (kDa)

6.36

Isoelectric Point (pI)

44.82

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000032)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g20531 FvH4_1g22101 FvH4_1g26161 FvH4_2g06802 FvH4_2g07851 FvH4_2g07920 FvH4_2g11481 FvH4_2g14491 FvH4_2g14510 FvH4_3g02671 FvH4_3g10870 FvH4_3g16811 FvH4_3g18871 FvH4_3g20011 FvH4_3g29181 FvH4_3g30101 FvH4_3g33941 FvH4_4g08031 FvH4_4g10192 FvH4_4g20791 FvH4_5g02440 FvH4_5g03261 FvH4_5g15791 FvH4_5g22472 FvH4_5g23680 FvH4_5g26530 FvH4_5g26540 FvH4_5g30241 FvH4_5g32311 FvH4_5g38943 FvH4_6g05152 FvH4_6g10481 FvH4_6g14353 FvH4_6g17850 FvH4_6g19460 FvH4_6g23861 FvH4_6g30881 FvH4_6g31722 FvH4_6g40031 FvH4_6g46031 FvH4_6g49021 FvH4_7g12530 FvH4_7g15960
pyrus_communis pycom09g18450
rosa_chinensis RchiOBHm_Chr1g0341771 RchiOBHm_Chr1g0354791 RchiOBHm_Chr2g0095751 RchiOBHm_Chr5g0030691 RchiOBHm_Chr7g0181741 RchiOBHm_Chr7g0222721 RchiOBHm_Chr7g0243191
rosa_laevigata RLG00000001405 RLG00000001878 RLG00000002053 RLG00000002361 RLG00000003846 RLG00000012639 RLG00000013326 RLG00000014331 RLG00000017340 RLG00000017548 RLG00000018177 RLG00000018372 RLG00000019006 RLG00000019406 RLG00000019522 RLG00000019922 RLG00000020489 RLG00000022399 RLG00000023433 RLG00000027372 RLG00000028576 RLG00000028590 RLG00000028947 RLG00000032552 RLG00000033183 RLG00000033245 RLG00000033730 RLG00000034443 RLG00000034772 RLG00000036008
rosa_multiflora Rmu_co8029972.1_g000001 Rmu_co8044978.1_g000001 Rmu_co8338363.1_g000001 Rmu_co8426431.1_g000002 Rmu_co8457575.1_g000001 Rmu_sc0000010.1_g000025 Rmu_sc0000197.1_g000018 Rmu_sc0000220.1_g000009 Rmu_sc0000221.1_g000012 Rmu_sc0000258.1_g000002 Rmu_sc0000284.1_g000015 Rmu_sc0000303.1_g000021 Rmu_sc0000309.1_g000015 Rmu_sc0000317.1_g000017 Rmu_sc0000355.1_g000003 Rmu_sc0000376.1_g000035 Rmu_sc0000420.1_g000009 Rmu_sc0000493.1_g000019 Rmu_sc0000498.1_g000044 Rmu_sc0000540.1_g000015 Rmu_sc0000554.1_g000031 Rmu_sc0000577.1_g000004 Rmu_sc0000647.1_g000007 Rmu_sc0000703.1_g000002 Rmu_sc0000776.1_g000025 Rmu_sc0000924.1_g000044 Rmu_sc0000940.1_g000034 Rmu_sc0000940.1_g000036 Rmu_sc0000990.1_g000014 Rmu_sc0001004.1_g000018 Rmu_sc0001027.1_g000014 Rmu_sc0001059.1_g000004 Rmu_sc0001089.1_g000021 Rmu_sc0001118.1_g000013 Rmu_sc0001141.1_g000024 Rmu_sc0001154.1_g000002 Rmu_sc0001179.1_g000023 Rmu_sc0001230.1_g000014 Rmu_sc0001298.1_g000042 Rmu_sc0001306.1_g000030 Rmu_sc0001306.1_g000036 Rmu_sc0001341.1_g000007 Rmu_sc0001386.1_g000013 Rmu_sc0001461.1_g000019 Rmu_sc0001461.1_g000047 Rmu_sc0001476.1_g000013 Rmu_sc0001516.1_g000032 Rmu_sc0001780.1_g000007 Rmu_sc0001793.1_g000005 Rmu_sc0001911.1_g000013 Rmu_sc0001962.1_g000011 Rmu_sc0001986.1_g000004 Rmu_sc0002061.1_g000021 Rmu_sc0002119.1_g000024 Rmu_sc0002194.1_g000021 Rmu_sc0002284.1_g000019 Rmu_sc0002316.1_g000014 Rmu_sc0002322.1_g000006 Rmu_sc0002351.1_g000107 Rmu_sc0002387.1_g000008 Rmu_sc0002389.1_g000029 Rmu_sc0002507.1_g000001 Rmu_sc0002589.1_g000038 Rmu_sc0002638.1_g000041 Rmu_sc0002656.1_g000007 Rmu_sc0002882.1_g000030 Rmu_sc0002927.1_g000034 Rmu_sc0003024.1_g000020 Rmu_sc0003032.1_g000027 Rmu_sc0003069.1_g000025 Rmu_sc0003268.1_g000002 Rmu_sc0003296.1_g000007 Rmu_sc0003363.1_g000073 Rmu_sc0003527.1_g000017 Rmu_sc0003638.1_g000007 Rmu_sc0003669.1_g000007 Rmu_sc0003882.1_g000021 Rmu_sc0003941.1_g000004 Rmu_sc0003979.1_g000007 Rmu_sc0003983.1_g000007 Rmu_sc0003989.1_g000017 Rmu_sc0004016.1_g000003 Rmu_sc0004020.1_g000025 Rmu_sc0004094.1_g000016 Rmu_sc0004135.1_g000002 Rmu_sc0004154.1_g000014 Rmu_sc0004316.1_g000002 Rmu_sc0004316.1_g000015 Rmu_sc0004321.1_g000013 Rmu_sc0004467.1_g000005 Rmu_sc0004517.1_g000007 Rmu_sc0004642.1_g000012 Rmu_sc0004729.1_g000024 Rmu_sc0004757.1_g000018 Rmu_sc0004788.1_g000003 Rmu_sc0004835.1_g000026 Rmu_sc0004889.1_g000019 Rmu_sc0004991.1_g000009 Rmu_sc0005045.1_g000004 Rmu_sc0005079.1_g000004 Rmu_sc0005083.1_g000008 Rmu_sc0005170.1_g000002 Rmu_sc0005190.1_g000009 Rmu_sc0005217.1_g000010 Rmu_sc0005234.1_g000011 Rmu_sc0005608.1_g000016 Rmu_sc0005802.1_g000029 Rmu_sc0005810.1_g000006 Rmu_sc0005904.1_g000006 Rmu_sc0005967.1_g000012 Rmu_sc0006028.1_g000027 Rmu_sc0006059.1_g000040 Rmu_sc0006423.1_g000002 Rmu_sc0006467.1_g000001 Rmu_sc0006470.1_g000004 Rmu_sc0006598.1_g000003 Rmu_sc0006599.1_g000004 Rmu_sc0006632.1_g000021 Rmu_sc0006707.1_g000008 Rmu_sc0006791.1_g000008 Rmu_sc0006835.1_g000016 Rmu_sc0007100.1_g000002 Rmu_sc0007115.1_g000009 Rmu_sc0007362.1_g000012 Rmu_sc0007461.1_g000004 Rmu_sc0007474.1_g000001 Rmu_sc0007681.1_g000011 Rmu_sc0007697.1_g000003 Rmu_sc0007704.1_g000001 Rmu_sc0007722.1_g000016 Rmu_sc0007843.1_g000001 Rmu_sc0007856.1_g000009 Rmu_sc0008328.1_g000007 Rmu_sc0008780.1_g000005 Rmu_sc0009185.1_g000011 Rmu_sc0009599.1_g000021 Rmu_sc0009881.1_g000002 Rmu_sc0009891.1_g000002 Rmu_sc0010357.1_g000003 Rmu_sc0010781.1_g000005 Rmu_sc0011133.1_g000005 Rmu_sc0012334.1_g000001 Rmu_sc0012569.1_g000015 Rmu_sc0012984.1_g000001 Rmu_sc0013508.1_g000001 Rmu_sc0013550.1_g000005 Rmu_sc0013730.1_g000001 Rmu_sc0013945.1_g000001 Rmu_sc0013945.1_g000003 Rmu_sc0014005.1_g000005 Rmu_sc0014111.1_g000009 Rmu_sc0014111.1_g000010 Rmu_sc0014203.1_g000025 Rmu_sc0014839.1_g000002 Rmu_sc0015410.1_g000001 Rmu_sc0015513.1_g000003 Rmu_sc0015791.1_g000008 Rmu_sc0016657.1_g000004 Rmu_sc0017187.1_g000002 Rmu_sc0017400.1_g000001 Rmu_sc0017895.1_g000006 Rmu_sc0018221.1_g000008 Rmu_sc0018825.1_g000002 Rmu_sc0019047.1_g000001 Rmu_sc0019077.1_g000001 Rmu_sc0019171.1_g000001 Rmu_sc0019299.1_g000002 Rmu_sc0020342.1_g000008 Rmu_sc0020688.1_g000002 Rmu_sc0020688.1_g000003 Rmu_sc0021871.1_g000012 Rmu_sc0022925.1_g000001 Rmu_sc0023965.1_g000005 Rmu_sc0024968.1_g000001 Rmu_sc0024969.1_g000001 Rmu_sc0025035.1_g000002 Rmu_sc0025167.1_g000005 Rmu_sc0025567.1_g000001 Rmu_sc0026096.1_g000001 Rmu_sc0026586.1_g000001 Rmu_sc0028358.1_g000002 Rmu_sc0032171.1_g000001 Rmu_sc0034632.1_g000001 Rmu_sc0034633.1_g000001 Rmu_sc0035481.1_g000001 Rmu_sc0036303.1_g000001 Rmu_sc0039774.1_g000001 Rmu_sc0040023.1_g000002 Rmu_sc0040790.1_g000001 Rmu_sc0041574.1_g000001 Rmu_sc0042768.1_g000003 Rmu_ssc0000038.1_g000016 Rmu_ssc0000062.1_g000035 Rmu_ssc0000083.1_g000009 Rmu_ssc0000093.1_g000006 Rmu_ssc0000112.1_g000023 Rmu_ssc0000155.1_g000007 Rmu_ssc0000171.1_g000017 Rmu_ssc0000196.1_g000017 Rmu_ssc0000257.1_g000027 Rmu_ssc0000323.1_g000023 Rmu_ssc0000440.1_g000011 Rmu_ssc0000454.1_g000021 Rmu_ssc0000473.1_g000011
rosa_roxburghii Rroxscaffold_1G00014010 Rroxscaffold_1G00039470 Rroxscaffold_1G00045350 Rroxscaffold_2G00082440 Rroxscaffold_2G00096630 Rroxscaffold_2G00100560 Rroxscaffold_2G00102600 Rroxscaffold_2G00117720 Rroxscaffold_2G00120390 Rroxscaffold_2G00126010 Rroxscaffold_3G00220680 Rroxscaffold_3G00241760 Rroxscaffold_4G00309670 Rroxscaffold_4G00312380 Rroxscaffold_5G00339950 Rroxscaffold_5G00361980 Rroxscaffold_5G00370500 Rroxscaffold_5G00376480 Rroxscaffold_5G00384070 Rroxscaffold_6G00393690 Rroxscaffold_6G00396520 Rroxscaffold_6G00396850 Rroxscaffold_6G00404790 Rroxscaffold_7G00177690 Rroxscaffold_7G00178170 Rroxscaffold_7G00194330 Rroxscaffold_7G00197090 Rroxscaffold_9G00437910
rosa_rugosa Rorug01G0010100 Rorug01G0035300 Rorug01G0038600 Rorug01G0038700 Rorug01G0050300 Rorug01G0143800.1 Rorug01G0211700 Rorug01G0266600 Rorug01G0268800 Rorug01G0301200 Rorug02G0139800 Rorug02G0247100 Rorug02G0247100 Rorug02G0276800 Rorug02G0283300 Rorug02G0289800 Rorug02G0326700 Rorug02G0368100 Rorug02G0427000 Rorug02G0439100 Rorug02G0611200 Rorug02G0626600 Rorug03G0049100 Rorug03G0108000 Rorug03G0118600 Rorug03G0174300.1 Rorug03G0182300 Rorug03G0189800 Rorug03G0207000 Rorug03G0220700 Rorug03G0229400 Rorug03G0253700 Rorug03G0276500 Rorug03G0283300.1 Rorug03G0283500 Rorug03G0283600 Rorug03G0299600 Rorug04G0052200 Rorug04G0052300 Rorug04G0115800 Rorug04G0159700 Rorug04G0170900 Rorug04G0178100 Rorug04G0250800 Rorug04G0317200 Rorug04G0409500 Rorug05G0022500 Rorug05G0134900 Rorug05G0144800 Rorug05G0158200 Rorug05G0168300 Rorug05G0168400 Rorug05G0168600 Rorug05G0229800 Rorug05G0259100 Rorug05G0285700 Rorug05G0294600 Rorug05G0306400 Rorug05G0335300 Rorug05G0390100 Rorug05G0392900 Rorug05G0407100 Rorug05G0416600 Rorug05G0536900 Rorug05G0550300 Rorug06G0040900 Rorug06G0042800 Rorug06G0093000 Rorug06G0110700 Rorug06G0115600 Rorug06G0205700 Rorug07G0016900.1 Rorug07G0017000 Rorug07G0095200 Rorug07G0106400 Rorug07G0116400 Rorug07G0127300 Rorug07G0151100 Rorug07G0151200 Rorug07G0178200 Rorug07G0224300 Rorug07G0224400 Rorug07G0226400 Rorug07G0258200 Rorug07G0328000 RorugPtG0002700.1
rosa_samantha Rh1BG231600 Rh1BG235500 Rh1DG259300 Rh2AG044200 Rh2AG095600 Rh2AG164800 Rh2AG361400 Rh2AG370600 Rh2AG487800 Rh2AG620400 Rh2BG171900 Rh2BG244600 Rh2BG500300 Rh2CG189500 Rh2CG317600 Rh2CG374400 Rh2CG474300 Rh2DG170300 Rh2DG374800 Rh2DG511500 Rh3AG273400 Rh3AG331300 Rh3CG203900 Rh3CG222200 Rh3CG253800 Rh3CG269900 Rh3DG073800 Rh3DG208100 Rh3DG224000 Rh3DG265900 Rh4AG217200 Rh4BG076000 Rh4BG113200 Rh4BG240700 Rh4BG414300 Rh4CG266600 Rh4CG307600 Rh5BG088500 Rh5BG469000 Rh5CG284400 Rh5CG491200 Rh5CG557400 Rh5DG399000 Rh6AG457400 Rh6BG339800 Rh6BG443700 Rh6CG115400 Rh6CG471500 Rh6DG390100 Rh6DG457900 Rh7AG372100 Rh7AG429800 Rh7AG484600 Rh7BG176400 Rh7BG233900 Rh7BG244400 Rh7BG279800 Rh7BG285100 Rh7CG172200 Rh7CG390500 Rh7CG502600 Rh7CG518200 Rh7DG252500 Rh7DG294200 Rh7DG376400 Rh7DG390100
rosa_wichuraiana Rw0G001650

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 787
AccB1I GGYRCC 1 cut(s) 787
AccI GTMKAC 2 cut(s) 220, 1364
AciI CCGC 3 cut(s) 128, 653, 848
AclWI GGATC 7 cut(s) 165, 267, 445, 895, 930, 943, 1206
AcoI YGGCCR 1 cut(s) 150
AcsI RAATTY 2 cut(s) 545, 582
AcuI CTGAAG 1 cut(s) 503
AfaI GTAC 2 cut(s) 789, 1059
AfiI CCNNNNNNNGG 3 cut(s) 349, 460, 674
AgeI ACCGGT 1 cut(s) 142
AgsI TTSAA 4 cut(s) 205, 298, 550, 601
AhlI ACTAGT 1 cut(s) 334
AjiI CACGTC 1 cut(s) 943
AjnI CCWGG 1 cut(s) 807
AloI GAACNNNNNNTCC 2 cut(s) 1136, 1168
AluBI AGCT 8 cut(s) 39, 47, 686, 802, 1195, 1373, 1406, 1415
AluI AGCT 8 cut(s) 39, 47, 686, 802, 1195, 1373, 1406, 1415
Alw21I GWGCWC 1 cut(s) 1232
Alw26I GTCTC 3 cut(s) 620, 719, 906
AlwI GGATC 7 cut(s) 165, 267, 445, 895, 930, 943, 1206
AlwNI CAGNNNCTG 1 cut(s) 472
Ama87I CYCGRG 1 cut(s) 709
AoxI GGCC 2 cut(s) 150, 959
ApeKI GCWGC 6 cut(s) 44, 85, 466, 686, 1370, 1412
ApoI RAATTY 2 cut(s) 545, 582
AsiGI ACCGGT 1 cut(s) 142
Asp700I GAANNNNTTC 1 cut(s) 950
Asp718I GGTACC 1 cut(s) 787
AspLEI GCGC 1 cut(s) 90
AspS9I GGNCC 3 cut(s) 208, 284, 959
AsuC2I CCSGG 1 cut(s) 1165
AsuHPI GGTGA 1 cut(s) 507
AsuII TTCGAA 1 cut(s) 175
AvaI CYCGRG 1 cut(s) 709
AvaII GGWCC 2 cut(s) 208, 284
BaeGI GKGCMC 1 cut(s) 567
BalI TGGCCA 1 cut(s) 152
BamHI GGATCC 1 cut(s) 935
BanI GGYRCC 1 cut(s) 787
Bbv12I GWGCWC 1 cut(s) 1232
BbvI GCAGC 6 cut(s) 56, 97, 478, 673, 1382, 1424
BccI CCATC 6 cut(s) 434, 532, 668, 800, 1228, 1522
BciT130I CCWGG 1 cut(s) 809
BclI TGATCA 3 cut(s) 312, 835, 1174
BcnI CCSGG 1 cut(s) 1165
BcoDI GTCTC 3 cut(s) 620, 719, 906
BcuI ACTAGT 1 cut(s) 334
BfaI CTAG 3 cut(s) 335, 1268, 1449
BfmI CTRYAG 2 cut(s) 83, 1368
BfoI RGCGCY 1 cut(s) 91
BisI GCNGC 6 cut(s) 45, 86, 467, 687, 1371, 1413
BlpI GCTNAGC 3 cut(s) 798, 1374, 1416
BlsI GCNGC 6 cut(s) 46, 87, 468, 688, 1372, 1414
Bme1390I CCNGG 2 cut(s) 809, 1165
Bme18I GGWCC 2 cut(s) 208, 284
BmeT110I CYCGRG 1 cut(s) 709
BmgBI CACGTC 1 cut(s) 943
BmgT120I GGNCC 3 cut(s) 208, 284, 959
BmiI GGNNCC 3 cut(s) 477, 789, 937
BmrFI CCNGG 2 cut(s) 809, 1165
BmrI ACTGGG 2 cut(s) 449, 1091
BmsI GCATC 2 cut(s) 654, 1160
BmuI ACTGGG 2 cut(s) 449, 1091
BpmI CTGGAG 1 cut(s) 1055
Bpu1102I GCTNAGC 3 cut(s) 798, 1374, 1416
Bpu14I TTCGAA 1 cut(s) 175
BpuEI CTTGAG 1 cut(s) 1160
BpuMI CCSGG 1 cut(s) 1165
Bsa29I ATCGAT 1 cut(s) 987
BsaI GGTCTC 1 cut(s) 906
BsaJI CCNNGG 5 cut(s) 153, 287, 669, 807, 1083
BsaWI WCCGGW 1 cut(s) 142
Bsc4I CCNNNNNNNGG 3 cut(s) 349, 460, 674
Bse118I RCCGGY 1 cut(s) 142
Bse1I ACTGG 4 cut(s) 57, 455, 477, 1097
Bse3DI GCAATG 2 cut(s) 411, 453
BseBI CCWGG 1 cut(s) 809
BseCI ATCGAT 1 cut(s) 987
BseDI CCNNGG 5 cut(s) 153, 287, 669, 807, 1083
BseGI GGATG 3 cut(s) 547, 679, 1151
BseLI CCNNNNNNNGG 3 cut(s) 349, 460, 674
BseMI GCAATG 2 cut(s) 411, 453
BseMII CTCAG 2 cut(s) 789, 1388
BseNI ACTGG 4 cut(s) 57, 455, 477, 1097
BseRI GAGGAG 3 cut(s) 476, 743, 1400
BseSI GKGCMC 1 cut(s) 567
BseXI GCAGC 6 cut(s) 56, 97, 478, 673, 1382, 1424
BsgI GTGCAG 2 cut(s) 146, 1431
Bsh1285I CGRYCG 1 cut(s) 128
BshFI GGCC 2 cut(s) 152, 961
BshNI GGYRCC 1 cut(s) 787
BshTI ACCGGT 1 cut(s) 142
BshVI ATCGAT 1 cut(s) 987
BsiEI CGRYCG 1 cut(s) 128
BsiHKAI GWGCWC 1 cut(s) 1232
BsiHKCI CYCGRG 1 cut(s) 709
BsiSI CCGG 2 cut(s) 143, 1164
BslFI GGGAC 1 cut(s) 349
BslI CCNNNNNNNGG 3 cut(s) 349, 460, 674
BsmAI GTCTC 3 cut(s) 620, 719, 906
BsmFI GGGAC 1 cut(s) 349
BsmI GAATGC 1 cut(s) 1134
BsnI GGCC 2 cut(s) 152, 961
Bso31I GGTCTC 1 cut(s) 906
BsoBI CYCGRG 1 cut(s) 709
Bsp119I TTCGAA 1 cut(s) 175
Bsp1286I GDGCHC 2 cut(s) 567, 1232
Bsp1720I GCTNAGC 3 cut(s) 798, 1374, 1416
Bsp19I CCATGG 1 cut(s) 153
BspACI CCGC 3 cut(s) 128, 653, 848
BspANI GGCC 2 cut(s) 152, 961
BspCNI CTCAG 2 cut(s) 790, 1387
BspDI ATCGAT 1 cut(s) 987
BspHI TCATGA 2 cut(s) 660, 1171
BspLI GGNNCC 3 cut(s) 477, 789, 937
BspMAI CTGCAG 2 cut(s) 87, 1372
BspPI GGATC 7 cut(s) 165, 267, 445, 895, 930, 943, 1206
BspT104I TTCGAA 1 cut(s) 175
BspT107I GGYRCC 1 cut(s) 787
BspTNI GGTCTC 1 cut(s) 906
BsrDI GCAATG 2 cut(s) 411, 453
BsrFI RCCGGY 1 cut(s) 142
BsrI ACTGG 4 cut(s) 57, 455, 477, 1097
BssAI RCCGGY 1 cut(s) 142
BssECI CCNNGG 5 cut(s) 153, 287, 669, 807, 1083
BssNAI GTATAC 1 cut(s) 221
BssT1I CCWWGG 3 cut(s) 153, 669, 1083
Bst1107I GTATAC 1 cut(s) 221
Bst2UI CCWGG 1 cut(s) 809
Bst4CI ACNGT 4 cut(s) 352, 562, 1018, 1399
Bst6I CTCTTC 8 cut(s) 16, 517, 747, 761, 956, 1045, 1422, 1464
BstAPI GCANNNNNTGC 1 cut(s) 41
BstBI TTCGAA 1 cut(s) 175
BstC8I GCNNGC 5 cut(s) 37, 120, 651, 684, 1309
BstDEI CTNAG 3 cut(s) 798, 1374, 1416
BstDSI CCRYGG 2 cut(s) 153, 287
BstF5I GGATG 3 cut(s) 547, 679, 1151
BstH2I RGCGCY 1 cut(s) 91
BstHHI GCGC 1 cut(s) 90
BstMAI GTCTC 3 cut(s) 620, 719, 906
BstMCI CGRYCG 1 cut(s) 128
BstMWI GCNNNNNNNGC 8 cut(s) 41, 53, 443, 1100, 1296, 1412, 1445, 1487
BstNI CCWGG 1 cut(s) 809
BstNSI RCATGY 1 cut(s) 1311
BstSCI CCNGG 2 cut(s) 807, 1163
BstSFI CTRYAG 2 cut(s) 83, 1368
BstSLI GKGCMC 1 cut(s) 567
BstV1I GCAGC 6 cut(s) 56, 97, 478, 673, 1382, 1424
BstX2I RGATCY 4 cut(s) 157, 887, 935, 1198
BstXI CCANNNNNNTGG 2 cut(s) 433, 525
BstYI RGATCY 4 cut(s) 157, 887, 935, 1198
BstZ17I GTATAC 1 cut(s) 221
Bsu15I ATCGAT 1 cut(s) 987
BsuRI GGCC 2 cut(s) 152, 961
BsuTUI ATCGAT 1 cut(s) 987
BtgI CCRYGG 2 cut(s) 153, 287
BtgZI GCGATG 1 cut(s) 778
BtrI CACGTC 1 cut(s) 943
BtsCI GGATG 3 cut(s) 547, 679, 1151
BtsI GCAGTG 3 cut(s) 80, 1158, 1446
BtsIMutI CAGTG 6 cut(s) 50, 80, 470, 479, 1158, 1446
Cac8I GCNNGC 5 cut(s) 37, 120, 651, 684, 1309
CaiI CAGNNNCTG 1 cut(s) 472
CciI TCATGA 2 cut(s) 660, 1171
CfoI GCGC 1 cut(s) 90
Cfr10I RCCGGY 1 cut(s) 142
Cfr13I GGNCC 3 cut(s) 208, 284, 959
ClaI ATCGAT 1 cut(s) 987
Csp6I GTAC 2 cut(s) 788, 1058
CspAI ACCGGT 1 cut(s) 142
CviAII CATG 8 cut(s) 154, 661, 784, 1061, 1172, 1300, 1308, 1337
CviQI GTAC 2 cut(s) 788, 1058
DdeI CTNAG 3 cut(s) 798, 1374, 1416
EaeI YGGCCR 1 cut(s) 150
Eam1104I CTCTTC 8 cut(s) 16, 517, 747, 761, 956, 1045, 1422, 1464
EarI CTCTTC 8 cut(s) 16, 517, 747, 761, 956, 1045, 1422, 1464
Eco130I CCWWGG 3 cut(s) 153, 669, 1083
Eco31I GGTCTC 1 cut(s) 906
Eco47I GGWCC 2 cut(s) 208, 284
Eco57I CTGAAG 1 cut(s) 503
Eco88I CYCGRG 1 cut(s) 709
EcoRI GAATTC 1 cut(s) 545
EcoRII CCWGG 1 cut(s) 807
EcoT14I CCWWGG 3 cut(s) 153, 669, 1083
ErhI CCWWGG 3 cut(s) 153, 669, 1083
FaeI CATG 8 cut(s) 157, 664, 787, 1064, 1175, 1303, 1311, 1340
FaqI GGGAC 1 cut(s) 349
FatI CATG 8 cut(s) 153, 660, 783, 1060, 1171, 1299, 1307, 1336
FbaI TGATCA 3 cut(s) 312, 835, 1174
FblI GTMKAC 2 cut(s) 220, 1364
Fnu4HI GCNGC 6 cut(s) 45, 86, 467, 687, 1371, 1413
FokI GGATG 3 cut(s) 554, 686, 1138
Fsp4HI GCNGC 6 cut(s) 45, 86, 467, 687, 1371, 1413
FspBI CTAG 3 cut(s) 335, 1268, 1449
GlaI GCGC 1 cut(s) 89
GluI GCNGC 6 cut(s) 45, 86, 467, 687, 1371, 1413
GsuI CTGGAG 1 cut(s) 1055
HaeII RGCGCY 1 cut(s) 91
HaeIII GGCC 2 cut(s) 152, 961
HapII CCGG 2 cut(s) 143, 1164
HhaI GCGC 1 cut(s) 90
Hin1II CATG 8 cut(s) 157, 664, 787, 1064, 1175, 1303, 1311, 1340
Hin6I GCGC 1 cut(s) 88
HinP1I GCGC 1 cut(s) 88
HincII GTYRAC 1 cut(s) 6
HindII GTYRAC 1 cut(s) 6
HindIII AAGCTT 1 cut(s) 37
HinfI GANTC 8 cut(s) 362, 628, 712, 770, 894, 1043, 1168, 1333
HpaII CCGG 2 cut(s) 143, 1164
HphI GGTGA 1 cut(s) 507
Hpy166II GTNNAC 4 cut(s) 6, 221, 340, 1365
Hpy188I TCNGA 5 cut(s) 537, 840, 906, 940, 1503
Hpy8I GTNNAC 4 cut(s) 6, 221, 340, 1365
Hpy99I CGWCG 1 cut(s) 944
HpyAV CCTTC 8 cut(s) 171, 323, 506, 510, 568, 713, 1165, 1438
HpyCH4III ACNGT 4 cut(s) 352, 562, 1018, 1399
HpyCH4IV ACGT 4 cut(s) 217, 432, 505, 942
HpyF10VI GCNNNNNNNGC 8 cut(s) 41, 53, 443, 1100, 1296, 1412, 1445, 1487
HpyF3I CTNAG 3 cut(s) 798, 1374, 1416
HpySE526I ACGT 4 cut(s) 217, 432, 505, 942
Hsp92II CATG 8 cut(s) 157, 664, 787, 1064, 1175, 1303, 1311, 1340
HspAI GCGC 1 cut(s) 88
KpnI GGTACC 1 cut(s) 791
Ksp22I TGATCA 3 cut(s) 312, 835, 1174
LmnI GCTCC 1 cut(s) 463
Lsp1109I GCAGC 6 cut(s) 56, 97, 478, 673, 1382, 1424
LweI GCATC 2 cut(s) 654, 1160
MaeI CTAG 3 cut(s) 335, 1268, 1449
MaeII ACGT 4 cut(s) 217, 432, 505, 942
MaeIII GTNAC 2 cut(s) 28, 811
MfeI CAATTG 1 cut(s) 1255
MflI RGATCY 4 cut(s) 157, 887, 935, 1198
MhlI GDGCHC 2 cut(s) 567, 1232
MlsI TGGCCA 1 cut(s) 152
MluNI TGGCCA 1 cut(s) 152
MlyI GAGTC 3 cut(s) 371, 622, 721
MmeI TCCRAC 2 cut(s) 963, 1455
Mox20I TGGCCA 1 cut(s) 152
MroXI GAANNNNTTC 1 cut(s) 950
MscI TGGCCA 1 cut(s) 152
MseI TTAA 8 cut(s) 95, 921, 971, 1191, 1278, 1349, 1391, 1521
MslI CAYNNNNRTG 2 cut(s) 431, 1225
Msp20I TGGCCA 1 cut(s) 152
MspA1I CMGCKG 2 cut(s) 130, 653
MspI CCGG 2 cut(s) 143, 1164
MspR9I CCNGG 2 cut(s) 809, 1165
MunI CAATTG 1 cut(s) 1255
Mva1269I GAATGC 1 cut(s) 1134
MvaI CCWGG 1 cut(s) 809
MwoI GCNNNNNNNGC 8 cut(s) 41, 53, 443, 1100, 1296, 1412, 1445, 1487
NciI CCSGG 1 cut(s) 1165
NcoI CCATGG 1 cut(s) 153
NlaIII CATG 8 cut(s) 157, 664, 787, 1064, 1175, 1303, 1311, 1340
NlaIV GGNNCC 3 cut(s) 477, 789, 937
NmuCI GTSAC 2 cut(s) 28, 811
NspI RCATGY 1 cut(s) 1311
NspV TTCGAA 1 cut(s) 175
PaeI GCATGC 1 cut(s) 1311
PagI TCATGA 2 cut(s) 660, 1171
PctI GAATGC 1 cut(s) 1134
PdmI GAANNNNTTC 1 cut(s) 950
PfeI GAWTC 5 cut(s) 770, 894, 1043, 1168, 1333
PinAI ACCGGT 1 cut(s) 142
PkrI GCNGC 6 cut(s) 46, 87, 468, 688, 1372, 1414
PleI GAGTC 3 cut(s) 370, 622, 720
PpsI GAGTC 3 cut(s) 370, 622, 720
Psp6I CCWGG 1 cut(s) 807
PspGI CCWGG 1 cut(s) 807
PspN4I GGNNCC 3 cut(s) 477, 789, 937
PspPI GGNCC 3 cut(s) 208, 284, 959
PstI CTGCAG 2 cut(s) 87, 1372
PstNI CAGNNNCTG 1 cut(s) 472
PsuI RGATCY 4 cut(s) 157, 887, 935, 1198
RsaI GTAC 2 cut(s) 789, 1059
RsaNI GTAC 2 cut(s) 788, 1058
RseI CAYNNNNRTG 2 cut(s) 431, 1225
SaqAI TTAA 8 cut(s) 95, 921, 971, 1191, 1278, 1349, 1391, 1521
SatI GCNGC 6 cut(s) 45, 86, 467, 687, 1371, 1413
Sau96I GGNCC 3 cut(s) 208, 284, 959
SchI GAGTC 3 cut(s) 371, 622, 721
ScrFI CCNGG 2 cut(s) 809, 1165
SduI GDGCHC 2 cut(s) 567, 1232
SfaNI GCATC 2 cut(s) 654, 1160
SfcI CTRYAG 2 cut(s) 83, 1368
SfuI TTCGAA 1 cut(s) 175
SinI GGWCC 2 cut(s) 208, 284
SmiMI CAYNNNNRTG 2 cut(s) 431, 1225
SmlI CTYRAG 1 cut(s) 1139
SmoI CTYRAG 1 cut(s) 1139
SpeI ACTAGT 1 cut(s) 334
SphI GCATGC 1 cut(s) 1311
SsiI CCGC 3 cut(s) 128, 653, 848
SspI AATATT 2 cut(s) 394, 1327
SspMI CTAG 3 cut(s) 335, 1268, 1449
StyD4I CCNGG 2 cut(s) 807, 1163
StyI CCWWGG 3 cut(s) 153, 669, 1083
TaaI ACNGT 4 cut(s) 352, 562, 1018, 1399
TaiI ACGT 4 cut(s) 220, 435, 508, 945
TaqI TCGA 9 cut(s) 102, 124, 175, 246, 387, 717, 828, 843, 987
TaqII GACCGA 1 cut(s) 1520
TatI WGTACW 1 cut(s) 1057
TfiI GAWTC 5 cut(s) 770, 894, 1043, 1168, 1333
Tru1I TTAA 8 cut(s) 95, 921, 971, 1191, 1278, 1349, 1391, 1521
Tru9I TTAA 8 cut(s) 95, 921, 971, 1191, 1278, 1349, 1391, 1521
TscAI CASTG 6 cut(s) 57, 87, 477, 486, 1165, 1446
TseFI GTSAC 2 cut(s) 28, 811
TseI GCWGC 6 cut(s) 44, 85, 466, 686, 1370, 1412
Tsp45I GTSAC 2 cut(s) 28, 811
TspDTI ATGAA 7 cut(s) 342, 558, 722, 772, 1160, 1440, 1482
TspGWI ACGGA 1 cut(s) 276
TspRI CASTG 6 cut(s) 57, 87, 477, 486, 1165, 1446
VpaK11BI GGWCC 2 cut(s) 208, 284
XapI RAATTY 2 cut(s) 545, 582
XceI RCATGY 1 cut(s) 1311
XcmI CCANNNNNNNNNTGG 1 cut(s) 430
XmiI GTMKAC 2 cut(s) 220, 1364
XmnI GAANNNNTTC 1 cut(s) 950
XspI CTAG 3 cut(s) 335, 1268, 1449
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.