Ribonuclease H protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 119 |
| AciI | CCGC | 1 cut(s) | 89 |
| AclWI | GGATC | 2 cut(s) | 83, 316 |
| AcsI | RAATTY | 1 cut(s) | 84 |
| AflII | CTTAAG | 1 cut(s) | 241 |
| AjnI | CCWGG | 1 cut(s) | 147 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 44, 76 |
| AluBI | AGCT | 3 cut(s) | 166, 251, 310 |
| AluI | AGCT | 3 cut(s) | 166, 251, 310 |
| Alw26I | GTCTC | 2 cut(s) | 205, 251 |
| AlwI | GGATC | 2 cut(s) | 83, 316 |
| AoxI | GGCC | 2 cut(s) | 126, 218 |
| ApoI | RAATTY | 1 cut(s) | 84 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 167 |
| AsuHPI | GGTGA | 1 cut(s) | 115 |
| BccI | CCATC | 5 cut(s) | 14, 22, 43, 91, 343 |
| BciT130I | CCWGG | 1 cut(s) | 149 |
| BcoDI | GTCTC | 2 cut(s) | 205, 251 |
| BfrI | CTTAAG | 1 cut(s) | 241 |
| Bme1390I | CCNGG | 1 cut(s) | 149 |
| BmiI | GGNNCC | 1 cut(s) | 33 |
| BmrFI | CCNGG | 1 cut(s) | 149 |
| Bse118I | RCCGGY | 1 cut(s) | 91 |
| Bse1I | ACTGG | 1 cut(s) | 184 |
| BseBI | CCWGG | 1 cut(s) | 149 |
| BseGI | GGATG | 1 cut(s) | 354 |
| BseMII | CTCAG | 2 cut(s) | 246, 371 |
| BseNI | ACTGG | 1 cut(s) | 184 |
| BseRI | GAGGAG | 1 cut(s) | 281 |
| BseYI | CCCAGC | 1 cut(s) | 35 |
| BshFI | GGCC | 2 cut(s) | 128, 220 |
| BsiSI | CCGG | 1 cut(s) | 92 |
| BsmAI | GTCTC | 2 cut(s) | 205, 251 |
| BsnI | GGCC | 2 cut(s) | 128, 220 |
| Bsp143I | GATC | 3 cut(s) | 75, 210, 321 |
| BspACI | CCGC | 1 cut(s) | 89 |
| BspANI | GGCC | 2 cut(s) | 128, 220 |
| BspCNI | CTCAG | 2 cut(s) | 247, 370 |
| BspHI | TCATGA | 1 cut(s) | 328 |
| BspLI | GGNNCC | 1 cut(s) | 33 |
| BspPI | GGATC | 2 cut(s) | 83, 316 |
| BspQI | GCTCTTC | 1 cut(s) | 173 |
| BspTI | CTTAAG | 1 cut(s) | 241 |
| BsrFI | RCCGGY | 1 cut(s) | 91 |
| BsrI | ACTGG | 1 cut(s) | 184 |
| BssAI | RCCGGY | 1 cut(s) | 91 |
| BssMI | GATC | 3 cut(s) | 75, 210, 321 |
| Bst2UI | CCWGG | 1 cut(s) | 149 |
| Bst4CI | ACNGT | 2 cut(s) | 43, 262 |
| Bst6I | CTCTTC | 1 cut(s) | 173 |
| BstAFI | CTTAAG | 1 cut(s) | 241 |
| BstC8I | GCNNGC | 2 cut(s) | 93, 308 |
| BstDEI | CTNAG | 2 cut(s) | 255, 357 |
| BstF5I | GGATG | 1 cut(s) | 354 |
| BstKTI | GATC | 3 cut(s) | 78, 213, 324 |
| BstMAI | GTCTC | 2 cut(s) | 205, 251 |
| BstMBI | GATC | 3 cut(s) | 75, 210, 321 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 134 |
| BstNI | CCWGG | 1 cut(s) | 149 |
| BstNSI | RCATGY | 1 cut(s) | 345 |
| BstSCI | CCNGG | 1 cut(s) | 147 |
| BsuRI | GGCC | 2 cut(s) | 128, 220 |
| BtgZI | GCGATG | 1 cut(s) | 110 |
| BtsCI | GGATG | 1 cut(s) | 354 |
| BtsIMutI | CAGTG | 1 cut(s) | 48 |
| Cac8I | GCNNGC | 2 cut(s) | 93, 308 |
| CciI | TCATGA | 1 cut(s) | 328 |
| Cfr10I | RCCGGY | 1 cut(s) | 91 |
| CviAII | CATG | 3 cut(s) | 206, 329, 342 |
| CviJI | RGCY | 6 cut(s) | 32, 128, 166, 220, 251, 310 |
| CviKI_1 | RGCY | 6 cut(s) | 32, 128, 166, 220, 251, 310 |
| DdeI | CTNAG | 2 cut(s) | 255, 357 |
| DpnI | GATC | 3 cut(s) | 77, 212, 323 |
| DpnII | GATC | 3 cut(s) | 75, 210, 321 |
| Eam1104I | CTCTTC | 1 cut(s) | 173 |
| EarI | CTCTTC | 1 cut(s) | 173 |
| EciI | GGCGGA | 1 cut(s) | 78 |
| Eco147I | AGGCCT | 1 cut(s) | 220 |
| Eco32I | GATATC | 1 cut(s) | 273 |
| EcoRII | CCWGG | 1 cut(s) | 147 |
| EcoRV | GATATC | 1 cut(s) | 273 |
| FaeI | CATG | 3 cut(s) | 209, 332, 345 |
| FaiI | YATR | 8 cut(s) | 8, 18, 119, 185, 207, 313, 330, 343 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 152, 184, 224, 256 |
| FatI | CATG | 3 cut(s) | 205, 328, 341 |
| FokI | GGATG | 1 cut(s) | 361 |
| GsaI | CCCAGC | 1 cut(s) | 39 |
| HaeIII | GGCC | 2 cut(s) | 128, 220 |
| HapII | CCGG | 1 cut(s) | 92 |
| Hin1II | CATG | 3 cut(s) | 209, 332, 345 |
| HinfI | GANTC | 3 cut(s) | 53, 198, 300 |
| HpaII | CCGG | 1 cut(s) | 92 |
| HphI | GGTGA | 1 cut(s) | 115 |
| Hpy188I | TCNGA | 1 cut(s) | 27 |
| Hpy188III | TCNNGA | 4 cut(s) | 73, 79, 254, 329 |
| HpyAV | CCTTC | 2 cut(s) | 329, 335 |
| HpyCH4III | ACNGT | 2 cut(s) | 43, 262 |
| HpyCH4V | TGCA | 2 cut(s) | 306, 341 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 134 |
| HpyF3I | CTNAG | 2 cut(s) | 255, 357 |
| Hsp92II | CATG | 3 cut(s) | 209, 332, 345 |
| KroI | GCCGGC | 1 cut(s) | 91 |
| KroNI | GCCGGC | 1 cut(s) | 93 |
| Kzo9I | GATC | 3 cut(s) | 75, 210, 321 |
| LguI | GCTCTTC | 1 cut(s) | 173 |
| LmnI | GCTCC | 2 cut(s) | 37, 256 |
| LpnPI | CCDG | 8 cut(s) | 49, 58, 105, 123, 134, 161, 165, 267 |
| MaeIII | GTNAC | 1 cut(s) | 314 |
| MalI | GATC | 3 cut(s) | 77, 212, 323 |
| MboI | GATC | 3 cut(s) | 75, 210, 321 |
| MboII | GAAGA | 3 cut(s) | 58, 160, 217 |
| MluCI | AATT | 3 cut(s) | 84, 186, 365 |
| MlyI | GAGTC | 3 cut(s) | 47, 207, 309 |
| MnlI | CCTC | 3 cut(s) | 94, 139, 259 |
| MreI | CGCCGGCG | 1 cut(s) | 91 |
| MroNI | GCCGGC | 1 cut(s) | 91 |
| MroXI | GAANNNNTTC | 1 cut(s) | 167 |
| MseI | TTAA | 1 cut(s) | 242 |
| MspCI | CTTAAG | 1 cut(s) | 241 |
| MspI | CCGG | 1 cut(s) | 92 |
| MspR9I | CCNGG | 1 cut(s) | 149 |
| MvaI | CCWGG | 1 cut(s) | 149 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 134 |
| NaeI | GCCGGC | 1 cut(s) | 93 |
| NdeII | GATC | 3 cut(s) | 75, 210, 321 |
| NgoMIV | GCCGGC | 1 cut(s) | 91 |
| NlaIII | CATG | 3 cut(s) | 209, 332, 345 |
| NlaIV | GGNNCC | 1 cut(s) | 33 |
| NmuCI | GTSAC | 1 cut(s) | 314 |
| NspI | RCATGY | 1 cut(s) | 345 |
| PagI | TCATGA | 1 cut(s) | 328 |
| PceI | AGGCCT | 1 cut(s) | 220 |
| PciSI | GCTCTTC | 1 cut(s) | 173 |
| PdiI | GCCGGC | 1 cut(s) | 93 |
| PdmI | GAANNNNTTC | 1 cut(s) | 167 |
| PfoI | TCCNGGA | 1 cut(s) | 147 |
| PleI | GAGTC | 3 cut(s) | 47, 206, 308 |
| PpsI | GAGTC | 3 cut(s) | 47, 206, 308 |
| PsiI | TTATAA | 1 cut(s) | 119 |
| Psp6I | CCWGG | 1 cut(s) | 147 |
| PspFI | CCCAGC | 1 cut(s) | 35 |
| PspGI | CCWGG | 1 cut(s) | 147 |
| PspN4I | GGNNCC | 1 cut(s) | 33 |
| SapI | GCTCTTC | 1 cut(s) | 173 |
| SaqAI | TTAA | 1 cut(s) | 242 |
| Sau3AI | GATC | 3 cut(s) | 75, 210, 321 |
| SchI | GAGTC | 3 cut(s) | 47, 207, 309 |
| ScrFI | CCNGG | 1 cut(s) | 149 |
| SetI | ASST | 7 cut(s) | 105, 168, 242, 248, 253, 312, 340 |
| SgrAI | CRCCGGYG | 1 cut(s) | 91 |
| SmlI | CTYRAG | 1 cut(s) | 241 |
| SmoI | CTYRAG | 1 cut(s) | 241 |
| Sse9I | AATT | 3 cut(s) | 84, 186, 365 |
| SseBI | AGGCCT | 1 cut(s) | 220 |
| SsiI | CCGC | 1 cut(s) | 89 |
| StuI | AGGCCT | 1 cut(s) | 220 |
| StyD4I | CCNGG | 1 cut(s) | 147 |
| TaaI | ACNGT | 2 cut(s) | 43, 262 |
| TaqI | TCGA | 3 cut(s) | 78, 171, 196 |
| TasI | AATT | 3 cut(s) | 84, 186, 365 |
| Tru1I | TTAA | 1 cut(s) | 242 |
| Tru9I | TTAA | 1 cut(s) | 242 |
| TscAI | CASTG | 1 cut(s) | 48 |
| TseFI | GTSAC | 1 cut(s) | 314 |
| Tsp45I | GTSAC | 1 cut(s) | 314 |
| TspDTI | ATGAA | 2 cut(s) | 317, 348 |
| TspGWI | ACGGA | 1 cut(s) | 121 |
| TspRI | CASTG | 1 cut(s) | 48 |
| Vha464I | CTTAAG | 1 cut(s) | 241 |
| XapI | RAATTY | 1 cut(s) | 84 |
| XceI | RCATGY | 1 cut(s) | 345 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 121 |
| XmnI | GAANNNNTTC | 1 cut(s) | 167 |