ribonuclease H protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| DUF4283 | PF14111 | 55 - 114 | 7.4e-11 | Domain of unknown function (DUF4283) |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 106 |
| AclWI | GGATC | 1 cut(s) | 301 |
| AcsI | RAATTY | 2 cut(s) | 7, 209 |
| AfaI | GTAC | 1 cut(s) | 302 |
| AgsI | TTSAA | 3 cut(s) | 184, 214, 394 |
| AlwI | GGATC | 1 cut(s) | 301 |
| ApoI | RAATTY | 2 cut(s) | 7, 209 |
| BccI | CCATC | 2 cut(s) | 332, 340 |
| BfaI | CTAG | 1 cut(s) | 225 |
| BglII | AGATCT | 1 cut(s) | 166 |
| BisI | GCNGC | 1 cut(s) | 106 |
| BlsI | GCNGC | 1 cut(s) | 107 |
| BmiI | GGNNCC | 1 cut(s) | 275 |
| BmsI | GCATC | 1 cut(s) | 50 |
| BpuEI | CTTGAG | 1 cut(s) | 245 |
| BsaBI | GATNNNNATC | 1 cut(s) | 369 |
| Bse8I | GATNNNNATC | 1 cut(s) | 369 |
| BseGI | GGATG | 1 cut(s) | 70 |
| BseJI | GATNNNNATC | 1 cut(s) | 369 |
| Bsp143I | GATC | 4 cut(s) | 166, 256, 268, 293 |
| BspACI | CCGC | 1 cut(s) | 106 |
| BspLI | GGNNCC | 1 cut(s) | 275 |
| BspPI | GGATC | 1 cut(s) | 301 |
| BssMI | GATC | 4 cut(s) | 166, 256, 268, 293 |
| Bst4CI | ACNGT | 1 cut(s) | 20 |
| Bst6I | CTCTTC | 1 cut(s) | 251 |
| BstC8I | GCNNGC | 2 cut(s) | 58, 129 |
| BstF5I | GGATG | 1 cut(s) | 70 |
| BstKTI | GATC | 4 cut(s) | 169, 259, 271, 296 |
| BstMBI | GATC | 4 cut(s) | 166, 256, 268, 293 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 47, 133 |
| BstX2I | RGATCY | 1 cut(s) | 166 |
| BstYI | RGATCY | 1 cut(s) | 166 |
| BtsCI | GGATG | 1 cut(s) | 70 |
| BtsIMutI | CAGTG | 1 cut(s) | 25 |
| Cac8I | GCNNGC | 2 cut(s) | 58, 129 |
| CseI | GACGC | 1 cut(s) | 205 |
| Csp6I | GTAC | 1 cut(s) | 301 |
| CviAII | CATG | 1 cut(s) | 297 |
| CviJI | RGCY | 2 cut(s) | 136, 224 |
| CviKI_1 | RGCY | 2 cut(s) | 136, 224 |
| CviQI | GTAC | 1 cut(s) | 301 |
| DpnI | GATC | 4 cut(s) | 168, 258, 270, 295 |
| DpnII | GATC | 4 cut(s) | 166, 256, 268, 293 |
| Eam1104I | CTCTTC | 1 cut(s) | 251 |
| EarI | CTCTTC | 1 cut(s) | 251 |
| FaeI | CATG | 1 cut(s) | 300 |
| FaiI | YATR | 6 cut(s) | 189, 286, 298, 314, 320, 368 |
| FatI | CATG | 1 cut(s) | 296 |
| Fnu4HI | GCNGC | 1 cut(s) | 106 |
| FokI | GGATG | 1 cut(s) | 77 |
| Fsp4HI | GCNGC | 1 cut(s) | 106 |
| FspBI | CTAG | 1 cut(s) | 225 |
| GluI | GCNGC | 1 cut(s) | 106 |
| HgaI | GACGC | 1 cut(s) | 205 |
| Hin1II | CATG | 1 cut(s) | 300 |
| HinfI | GANTC | 2 cut(s) | 142, 370 |
| Hpy188I | TCNGA | 2 cut(s) | 141, 273 |
| Hpy188III | TCNNGA | 1 cut(s) | 25 |
| Hpy99I | CGWCG | 1 cut(s) | 41 |
| HpyCH4III | ACNGT | 1 cut(s) | 20 |
| HpyCH4V | TGCA | 1 cut(s) | 328 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 47, 133 |
| Hsp92II | CATG | 1 cut(s) | 300 |
| Kzo9I | GATC | 4 cut(s) | 166, 256, 268, 293 |
| LmnI | GCTCC | 1 cut(s) | 92 |
| LpnPI | CCDG | 5 cut(s) | 42, 174, 206, 243, 370 |
| LweI | GCATC | 1 cut(s) | 50 |
| MaeI | CTAG | 1 cut(s) | 225 |
| MaeIII | GTNAC | 1 cut(s) | 22 |
| MalI | GATC | 4 cut(s) | 168, 258, 270, 295 |
| MboI | GATC | 4 cut(s) | 166, 256, 268, 293 |
| MboII | GAAGA | 3 cut(s) | 238, 299, 373 |
| MflI | RGATCY | 1 cut(s) | 166 |
| MluCI | AATT | 4 cut(s) | 7, 209, 360, 394 |
| MmeI | TCCRAC | 1 cut(s) | 196 |
| MnlI | CCTC | 3 cut(s) | 147, 254, 284 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 47, 133 |
| NdeII | GATC | 4 cut(s) | 166, 256, 268, 293 |
| NlaIII | CATG | 1 cut(s) | 300 |
| NlaIV | GGNNCC | 1 cut(s) | 275 |
| NmuCI | GTSAC | 1 cut(s) | 22 |
| PfeI | GAWTC | 2 cut(s) | 142, 370 |
| PflFI | GACNNNGTC | 1 cut(s) | 20 |
| PkrI | GCNGC | 1 cut(s) | 107 |
| PspN4I | GGNNCC | 1 cut(s) | 275 |
| PsuI | RGATCY | 1 cut(s) | 166 |
| PsyI | GACNNNGTC | 1 cut(s) | 20 |
| RsaI | GTAC | 1 cut(s) | 302 |
| RsaNI | GTAC | 1 cut(s) | 301 |
| SatI | GCNGC | 1 cut(s) | 106 |
| Sau3AI | GATC | 4 cut(s) | 166, 256, 268, 293 |
| SetI | ASST | 2 cut(s) | 219, 232 |
| SfaNI | GCATC | 1 cut(s) | 50 |
| SmlI | CTYRAG | 1 cut(s) | 260 |
| SmoI | CTYRAG | 1 cut(s) | 260 |
| Sse9I | AATT | 4 cut(s) | 7, 209, 360, 394 |
| SsiI | CCGC | 1 cut(s) | 106 |
| SspMI | CTAG | 1 cut(s) | 225 |
| TaaI | ACNGT | 1 cut(s) | 20 |
| TaqI | TCGA | 2 cut(s) | 354, 373 |
| TasI | AATT | 4 cut(s) | 7, 209, 360, 394 |
| TauI | GCSGC | 1 cut(s) | 108 |
| TfiI | GAWTC | 2 cut(s) | 142, 370 |
| TscAI | CASTG | 1 cut(s) | 25 |
| TseFI | GTSAC | 1 cut(s) | 22 |
| Tsp45I | GTSAC | 1 cut(s) | 22 |
| TspDTI | ATGAA | 2 cut(s) | 372, 383 |
| TspRI | CASTG | 1 cut(s) | 25 |
| Tth111I | GACNNNGTC | 1 cut(s) | 20 |
| XapI | RAATTY | 2 cut(s) | 7, 209 |
| XspI | CTAG | 1 cut(s) | 225 |