Rmu_sc0013945.1_g000003

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0013945.1
OG0000032
Physical Location & Seq
Forward (+)
9858 .. 12471
2614 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0013945.1_g000003.1.cds

Sequence Viewer

Length: 1086 bp
atggagcatgggtaccgggatgtgaatgtgccgggaattgggtcaccgagatggttgagctccgtgagggagtcgccgccaagaaagacaagggcactgcggggttgccgaccacggagagagtatttgagatttagagagcacgagtacccagtgaagatctgggtgtccagatcgatttgggtgaccttggctctggcgtgggctccctccaagcatcatcgaatttctattggtactgtgtttcggcgcgtgacctcaccttcgacatcgtcggacatagcagaggctaaggtggactcgccggaggcctatgagcgcggtggtagtggaggtaaaggagtttctgggtttgggaatggtttctgggagaatgagggaattgcttgggctgatagcggaatcatgttgccgtgtgactccaggattcccgctgctgtgctcccaagaatcgtgttccaagatttgctgctggaaaaagggaagtcaaaggtggagaattgttctaattcacatccaaccatgtcagtcatcgatgacgttattgctagttttgctgcgtctcttcccctcgccggcagcgacgtggtggacctttcttgcatggcaggagccgaggagagaggattcaagatccaggacagtccccagaatcgttttgtgatctccttcgatcttaagaaggacaagaacaaggccatcaagatggaaactttgttcttctggatgaagatcacaaacatcccacctactttggaggtcaaagaaaccattatgaacgtggcatccattgtgggtagtttggaaattgatcaaaagctgtttgacataactggcaagatccgagtgcatgttgcccatgagatcacaagacctttccttctcaagaagactctcaagctggctctgggtgtgattgaagaaatttctttcttctttgaaaacctaattggaagatgccgcaaatgcaatctcatcttccatgagaatgggacttgcttggttgctactccacataaacctgatccgatcacagctgctcctccacgcttggatctggtgagcccttttactggcttcaagtag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

361

Amino Acids

40.23

Weight (kDa)

9.19

Isoelectric Point (pI)

38.78

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000032)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g20531 FvH4_1g22101 FvH4_1g26161 FvH4_2g06802 FvH4_2g07851 FvH4_2g07920 FvH4_2g11481 FvH4_2g14491 FvH4_2g14510 FvH4_3g02671 FvH4_3g10870 FvH4_3g16811 FvH4_3g18871 FvH4_3g20011 FvH4_3g29181 FvH4_3g30101 FvH4_3g33941 FvH4_4g08031 FvH4_4g10192 FvH4_4g20791 FvH4_5g02440 FvH4_5g03261 FvH4_5g15791 FvH4_5g22472 FvH4_5g23680 FvH4_5g26530 FvH4_5g26540 FvH4_5g30241 FvH4_5g32311 FvH4_5g38943 FvH4_6g05152 FvH4_6g10481 FvH4_6g14353 FvH4_6g17850 FvH4_6g19460 FvH4_6g23861 FvH4_6g30881 FvH4_6g31722 FvH4_6g40031 FvH4_6g46031 FvH4_6g49021 FvH4_7g12530 FvH4_7g15960
pyrus_communis pycom09g18450
rosa_chinensis RchiOBHm_Chr1g0341771 RchiOBHm_Chr1g0354791 RchiOBHm_Chr2g0095751 RchiOBHm_Chr5g0030691 RchiOBHm_Chr7g0181741 RchiOBHm_Chr7g0222721 RchiOBHm_Chr7g0243191
rosa_laevigata RLG00000001405 RLG00000001878 RLG00000002053 RLG00000002361 RLG00000003846 RLG00000012639 RLG00000013326 RLG00000014331 RLG00000017340 RLG00000017548 RLG00000018177 RLG00000018372 RLG00000019006 RLG00000019406 RLG00000019522 RLG00000019922 RLG00000020489 RLG00000022399 RLG00000023433 RLG00000027372 RLG00000028576 RLG00000028590 RLG00000028947 RLG00000032552 RLG00000033183 RLG00000033245 RLG00000033730 RLG00000034443 RLG00000034772 RLG00000036008
rosa_multiflora Rmu_co8029972.1_g000001 Rmu_co8044978.1_g000001 Rmu_co8338363.1_g000001 Rmu_co8426431.1_g000002 Rmu_co8457575.1_g000001 Rmu_sc0000010.1_g000025 Rmu_sc0000197.1_g000018 Rmu_sc0000220.1_g000009 Rmu_sc0000221.1_g000012 Rmu_sc0000258.1_g000002 Rmu_sc0000284.1_g000015 Rmu_sc0000303.1_g000021 Rmu_sc0000309.1_g000015 Rmu_sc0000317.1_g000017 Rmu_sc0000355.1_g000003 Rmu_sc0000376.1_g000035 Rmu_sc0000420.1_g000009 Rmu_sc0000493.1_g000019 Rmu_sc0000498.1_g000044 Rmu_sc0000540.1_g000015 Rmu_sc0000554.1_g000031 Rmu_sc0000577.1_g000004 Rmu_sc0000647.1_g000007 Rmu_sc0000703.1_g000002 Rmu_sc0000776.1_g000025 Rmu_sc0000924.1_g000044 Rmu_sc0000940.1_g000034 Rmu_sc0000940.1_g000036 Rmu_sc0000990.1_g000014 Rmu_sc0001004.1_g000018 Rmu_sc0001027.1_g000014 Rmu_sc0001059.1_g000004 Rmu_sc0001089.1_g000021 Rmu_sc0001118.1_g000013 Rmu_sc0001141.1_g000024 Rmu_sc0001154.1_g000002 Rmu_sc0001179.1_g000023 Rmu_sc0001230.1_g000014 Rmu_sc0001298.1_g000042 Rmu_sc0001306.1_g000030 Rmu_sc0001306.1_g000036 Rmu_sc0001341.1_g000007 Rmu_sc0001386.1_g000013 Rmu_sc0001461.1_g000019 Rmu_sc0001461.1_g000047 Rmu_sc0001476.1_g000013 Rmu_sc0001516.1_g000032 Rmu_sc0001780.1_g000007 Rmu_sc0001793.1_g000005 Rmu_sc0001911.1_g000013 Rmu_sc0001962.1_g000011 Rmu_sc0001986.1_g000004 Rmu_sc0002061.1_g000021 Rmu_sc0002119.1_g000024 Rmu_sc0002194.1_g000021 Rmu_sc0002284.1_g000019 Rmu_sc0002316.1_g000014 Rmu_sc0002322.1_g000006 Rmu_sc0002351.1_g000107 Rmu_sc0002387.1_g000008 Rmu_sc0002389.1_g000029 Rmu_sc0002507.1_g000001 Rmu_sc0002589.1_g000038 Rmu_sc0002638.1_g000041 Rmu_sc0002656.1_g000007 Rmu_sc0002882.1_g000030 Rmu_sc0002927.1_g000034 Rmu_sc0003024.1_g000020 Rmu_sc0003032.1_g000027 Rmu_sc0003069.1_g000025 Rmu_sc0003268.1_g000002 Rmu_sc0003296.1_g000007 Rmu_sc0003363.1_g000073 Rmu_sc0003527.1_g000017 Rmu_sc0003638.1_g000007 Rmu_sc0003669.1_g000007 Rmu_sc0003882.1_g000021 Rmu_sc0003941.1_g000004 Rmu_sc0003979.1_g000007 Rmu_sc0003983.1_g000007 Rmu_sc0003989.1_g000017 Rmu_sc0004016.1_g000003 Rmu_sc0004020.1_g000025 Rmu_sc0004094.1_g000016 Rmu_sc0004135.1_g000002 Rmu_sc0004154.1_g000014 Rmu_sc0004316.1_g000002 Rmu_sc0004316.1_g000015 Rmu_sc0004321.1_g000013 Rmu_sc0004467.1_g000005 Rmu_sc0004517.1_g000007 Rmu_sc0004642.1_g000012 Rmu_sc0004729.1_g000024 Rmu_sc0004757.1_g000018 Rmu_sc0004788.1_g000003 Rmu_sc0004835.1_g000026 Rmu_sc0004889.1_g000019 Rmu_sc0004991.1_g000009 Rmu_sc0005045.1_g000004 Rmu_sc0005079.1_g000004 Rmu_sc0005083.1_g000008 Rmu_sc0005170.1_g000002 Rmu_sc0005190.1_g000009 Rmu_sc0005217.1_g000010 Rmu_sc0005234.1_g000011 Rmu_sc0005608.1_g000016 Rmu_sc0005802.1_g000029 Rmu_sc0005810.1_g000006 Rmu_sc0005904.1_g000006 Rmu_sc0005967.1_g000012 Rmu_sc0006028.1_g000027 Rmu_sc0006059.1_g000040 Rmu_sc0006423.1_g000002 Rmu_sc0006467.1_g000001 Rmu_sc0006470.1_g000004 Rmu_sc0006598.1_g000003 Rmu_sc0006599.1_g000004 Rmu_sc0006632.1_g000021 Rmu_sc0006707.1_g000008 Rmu_sc0006791.1_g000008 Rmu_sc0006835.1_g000016 Rmu_sc0007100.1_g000002 Rmu_sc0007115.1_g000009 Rmu_sc0007362.1_g000012 Rmu_sc0007461.1_g000004 Rmu_sc0007474.1_g000001 Rmu_sc0007681.1_g000011 Rmu_sc0007697.1_g000003 Rmu_sc0007704.1_g000001 Rmu_sc0007722.1_g000016 Rmu_sc0007843.1_g000001 Rmu_sc0007856.1_g000009 Rmu_sc0008328.1_g000007 Rmu_sc0008780.1_g000005 Rmu_sc0009185.1_g000011 Rmu_sc0009599.1_g000021 Rmu_sc0009881.1_g000002 Rmu_sc0009891.1_g000002 Rmu_sc0010357.1_g000003 Rmu_sc0010781.1_g000005 Rmu_sc0011133.1_g000005 Rmu_sc0012334.1_g000001 Rmu_sc0012569.1_g000015 Rmu_sc0012984.1_g000001 Rmu_sc0013508.1_g000001 Rmu_sc0013550.1_g000005 Rmu_sc0013730.1_g000001 Rmu_sc0013945.1_g000001 Rmu_sc0013945.1_g000003 Rmu_sc0014005.1_g000005 Rmu_sc0014111.1_g000009 Rmu_sc0014111.1_g000010 Rmu_sc0014203.1_g000025 Rmu_sc0014839.1_g000002 Rmu_sc0015410.1_g000001 Rmu_sc0015513.1_g000003 Rmu_sc0015791.1_g000008 Rmu_sc0016657.1_g000004 Rmu_sc0017187.1_g000002 Rmu_sc0017400.1_g000001 Rmu_sc0017895.1_g000006 Rmu_sc0018221.1_g000008 Rmu_sc0018825.1_g000002 Rmu_sc0019047.1_g000001 Rmu_sc0019077.1_g000001 Rmu_sc0019171.1_g000001 Rmu_sc0019299.1_g000002 Rmu_sc0020342.1_g000008 Rmu_sc0020688.1_g000002 Rmu_sc0020688.1_g000003 Rmu_sc0021871.1_g000012 Rmu_sc0022925.1_g000001 Rmu_sc0023965.1_g000005 Rmu_sc0024968.1_g000001 Rmu_sc0024969.1_g000001 Rmu_sc0025035.1_g000002 Rmu_sc0025167.1_g000005 Rmu_sc0025567.1_g000001 Rmu_sc0026096.1_g000001 Rmu_sc0026586.1_g000001 Rmu_sc0028358.1_g000002 Rmu_sc0032171.1_g000001 Rmu_sc0034632.1_g000001 Rmu_sc0034633.1_g000001 Rmu_sc0035481.1_g000001 Rmu_sc0036303.1_g000001 Rmu_sc0039774.1_g000001 Rmu_sc0040023.1_g000002 Rmu_sc0040790.1_g000001 Rmu_sc0041574.1_g000001 Rmu_sc0042768.1_g000003 Rmu_ssc0000038.1_g000016 Rmu_ssc0000062.1_g000035 Rmu_ssc0000083.1_g000009 Rmu_ssc0000093.1_g000006 Rmu_ssc0000112.1_g000023 Rmu_ssc0000155.1_g000007 Rmu_ssc0000171.1_g000017 Rmu_ssc0000196.1_g000017 Rmu_ssc0000257.1_g000027 Rmu_ssc0000323.1_g000023 Rmu_ssc0000440.1_g000011 Rmu_ssc0000454.1_g000021 Rmu_ssc0000473.1_g000011
rosa_roxburghii Rroxscaffold_1G00014010 Rroxscaffold_1G00039470 Rroxscaffold_1G00045350 Rroxscaffold_2G00082440 Rroxscaffold_2G00096630 Rroxscaffold_2G00100560 Rroxscaffold_2G00102600 Rroxscaffold_2G00117720 Rroxscaffold_2G00120390 Rroxscaffold_2G00126010 Rroxscaffold_3G00220680 Rroxscaffold_3G00241760 Rroxscaffold_4G00309670 Rroxscaffold_4G00312380 Rroxscaffold_5G00339950 Rroxscaffold_5G00361980 Rroxscaffold_5G00370500 Rroxscaffold_5G00376480 Rroxscaffold_5G00384070 Rroxscaffold_6G00393690 Rroxscaffold_6G00396520 Rroxscaffold_6G00396850 Rroxscaffold_6G00404790 Rroxscaffold_7G00177690 Rroxscaffold_7G00178170 Rroxscaffold_7G00194330 Rroxscaffold_7G00197090 Rroxscaffold_9G00437910
rosa_rugosa Rorug01G0010100 Rorug01G0035300 Rorug01G0038600 Rorug01G0038700 Rorug01G0050300 Rorug01G0143800.1 Rorug01G0211700 Rorug01G0266600 Rorug01G0268800 Rorug01G0301200 Rorug02G0139800 Rorug02G0247100 Rorug02G0247100 Rorug02G0276800 Rorug02G0283300 Rorug02G0289800 Rorug02G0326700 Rorug02G0368100 Rorug02G0427000 Rorug02G0439100 Rorug02G0611200 Rorug02G0626600 Rorug03G0049100 Rorug03G0108000 Rorug03G0118600 Rorug03G0174300.1 Rorug03G0182300 Rorug03G0189800 Rorug03G0207000 Rorug03G0220700 Rorug03G0229400 Rorug03G0253700 Rorug03G0276500 Rorug03G0283300.1 Rorug03G0283500 Rorug03G0283600 Rorug03G0299600 Rorug04G0052200 Rorug04G0052300 Rorug04G0115800 Rorug04G0159700 Rorug04G0170900 Rorug04G0178100 Rorug04G0250800 Rorug04G0317200 Rorug04G0409500 Rorug05G0022500 Rorug05G0134900 Rorug05G0144800 Rorug05G0158200 Rorug05G0168300 Rorug05G0168400 Rorug05G0168600 Rorug05G0229800 Rorug05G0259100 Rorug05G0285700 Rorug05G0294600 Rorug05G0306400 Rorug05G0335300 Rorug05G0390100 Rorug05G0392900 Rorug05G0407100 Rorug05G0416600 Rorug05G0536900 Rorug05G0550300 Rorug06G0040900 Rorug06G0042800 Rorug06G0093000 Rorug06G0110700 Rorug06G0115600 Rorug06G0205700 Rorug07G0016900.1 Rorug07G0017000 Rorug07G0095200 Rorug07G0106400 Rorug07G0116400 Rorug07G0127300 Rorug07G0151100 Rorug07G0151200 Rorug07G0178200 Rorug07G0224300 Rorug07G0224400 Rorug07G0226400 Rorug07G0258200 Rorug07G0328000 RorugPtG0002700.1
rosa_samantha Rh1BG231600 Rh1BG235500 Rh1DG259300 Rh2AG044200 Rh2AG095600 Rh2AG164800 Rh2AG361400 Rh2AG370600 Rh2AG487800 Rh2AG620400 Rh2BG171900 Rh2BG244600 Rh2BG500300 Rh2CG189500 Rh2CG317600 Rh2CG374400 Rh2CG474300 Rh2DG170300 Rh2DG374800 Rh2DG511500 Rh3AG273400 Rh3AG331300 Rh3CG203900 Rh3CG222200 Rh3CG253800 Rh3CG269900 Rh3DG073800 Rh3DG208100 Rh3DG224000 Rh3DG265900 Rh4AG217200 Rh4BG076000 Rh4BG113200 Rh4BG240700 Rh4BG414300 Rh4CG266600 Rh4CG307600 Rh5BG088500 Rh5BG469000 Rh5CG284400 Rh5CG491200 Rh5CG557400 Rh5DG399000 Rh6AG457400 Rh6BG339800 Rh6BG443700 Rh6CG115400 Rh6CG471500 Rh6DG390100 Rh6DG457900 Rh7AG372100 Rh7AG429800 Rh7AG484600 Rh7BG176400 Rh7BG233900 Rh7BG244400 Rh7BG279800 Rh7BG285100 Rh7CG172200 Rh7CG390500 Rh7CG502600 Rh7CG518200 Rh7DG252500 Rh7DG294200 Rh7DG376400 Rh7DG390100
rosa_wichuraiana Rw0G001650

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 12
AccB1I GGYRCC 1 cut(s) 12
AccII CGCG 2 cut(s) 252, 321
AciI CCGC 6 cut(s) 77, 100, 321, 399, 432, 961
AclWI GGATC 4 cut(s) 628, 835, 1019, 1062
AcsI RAATTY 2 cut(s) 225, 924
AfaI GTAC 3 cut(s) 14, 149, 238
AfiI CCNNNNNNNGG 3 cut(s) 38, 575, 1073
AflII CTTAAG 1 cut(s) 677
AgsI TTSAA 4 cut(s) 631, 920, 941, 1081
AjiI CACGTC 1 cut(s) 586
AjnI CCWGG 2 cut(s) 422, 636
AjuI GAANNNNNNNTTGG 2 cut(s) 933, 965
AloI GAACNNNNNNTCC 4 cut(s) 701, 733, 770, 802
AluBI AGCT 4 cut(s) 60, 820, 901, 1037
AluI AGCT 4 cut(s) 60, 820, 901, 1037
Alw21I GWGCWC 3 cut(s) 62, 144, 444
Alw26I GTCTC 1 cut(s) 567
AlwI GGATC 4 cut(s) 628, 835, 1019, 1062
AoxI GGCC 2 cut(s) 309, 696
ApeKI GCWGC 5 cut(s) 434, 469, 557, 579, 1037
ApoI RAATTY 2 cut(s) 225, 924
ArsI GACNNNNNNTTYG 2 cut(s) 247, 279
Asp700I GAANNNNTTC 1 cut(s) 362
Asp718I GGTACC 1 cut(s) 12
AspLEI GCGC 2 cut(s) 252, 321
AspS9I GGNCC 1 cut(s) 592
AsuC2I CCSGG 2 cut(s) 17, 33
AsuHPI GGTGA 4 cut(s) 36, 196, 252, 1072
AvaII GGWCC 1 cut(s) 592
BaeGI GKGCMC 1 cut(s) 97
BanI GGYRCC 1 cut(s) 12
BanII GRGCYC 3 cut(s) 62, 208, 1067
BauI CACGAG 1 cut(s) 143
BbsI GAAGAC 1 cut(s) 896
Bbv12I GWGCWC 3 cut(s) 62, 144, 444
BbvI GCAGC 5 cut(s) 421, 456, 544, 591, 1024
BccI CCATC 3 cut(s) 45, 700, 707
BceAI ACGGC 1 cut(s) 397
BciT130I CCWGG 2 cut(s) 424, 638
BclI TGATCA 1 cut(s) 811
BcnI CCSGG 2 cut(s) 17, 33
BcoDI GTCTC 1 cut(s) 567
BfaI CTAG 1 cut(s) 549
BfrI CTTAAG 1 cut(s) 677
BglII AGATCT 1 cut(s) 159
BisI GCNGC 7 cut(s) 77, 435, 470, 558, 580, 961, 1038
BlsI GCNGC 7 cut(s) 78, 436, 471, 559, 581, 962, 1039
Bme1390I CCNGG 4 cut(s) 17, 33, 424, 638
Bme18I GGWCC 1 cut(s) 592
BmgBI CACGTC 1 cut(s) 586
BmgT120I GGNCC 1 cut(s) 592
BmiI GGNNCC 3 cut(s) 14, 207, 613
BmrFI CCNGG 4 cut(s) 17, 33, 424, 638
BmrI ACTGGG 1 cut(s) 146
BmsI GCATC 3 cut(s) 226, 794, 947
BmuI ACTGGG 1 cut(s) 146
BpiI GAAGAC 1 cut(s) 896
BpmI CTGGAG 1 cut(s) 406
Bpu10I CCTNAGC 1 cut(s) 291
BpuEI CTTGAG 2 cut(s) 869, 881
BpuMI CCSGG 2 cut(s) 17, 33
Bsa29I ATCGAT 2 cut(s) 176, 534
BsaBI GATNNNNATC 1 cut(s) 731
BsaJI CCNNGG 3 cut(s) 113, 189, 615
BsaXI ACNNNNNCTCC 3 cut(s) 26, 1024, 1054
Bsc4I CCNNNNNNNGG 3 cut(s) 38, 575, 1073
Bse118I RCCGGY 1 cut(s) 575
Bse1I ACTGG 3 cut(s) 152, 838, 1078
Bse8I GATNNNNATC 1 cut(s) 731
BseBI CCWGG 2 cut(s) 424, 638
BseCI ATCGAT 2 cut(s) 176, 534
BseDI CCNNGG 3 cut(s) 113, 189, 615
BseGI GGATG 5 cut(s) 25, 514, 732, 741, 785
BseJI GATNNNNATC 1 cut(s) 731
BseLI CCNNNNNNNGG 3 cut(s) 38, 575, 1073
BseNI ACTGG 3 cut(s) 152, 838, 1078
BseRI GAGGAG 2 cut(s) 632, 1032
BseSI GKGCMC 1 cut(s) 97
BseXI GCAGC 5 cut(s) 421, 456, 544, 591, 1024
Bsh1236I CGCG 2 cut(s) 252, 321
BshFI GGCC 2 cut(s) 311, 698
BshNI GGYRCC 1 cut(s) 12
BshVI ATCGAT 2 cut(s) 176, 534
BsiHKAI GWGCWC 3 cut(s) 62, 144, 444
BsiSI CCGG 4 cut(s) 16, 32, 305, 576
BslFI GGGAC 2 cut(s) 630, 1006
BslI CCNNNNNNNGG 3 cut(s) 38, 575, 1073
BsmAI GTCTC 1 cut(s) 567
BsmBI CGTCTC 1 cut(s) 567
BsmFI GGGAC 2 cut(s) 630, 1006
BsnI GGCC 2 cut(s) 311, 698
Bsp1286I GDGCHC 6 cut(s) 62, 97, 144, 208, 444, 1067
BspACI CCGC 6 cut(s) 77, 100, 321, 399, 432, 961
BspANI GGCC 2 cut(s) 311, 698
BspDI ATCGAT 2 cut(s) 176, 534
BspFNI CGCG 2 cut(s) 252, 321
BspLI GGNNCC 3 cut(s) 14, 207, 613
BspPI GGATC 4 cut(s) 628, 835, 1019, 1062
BspT107I GGYRCC 1 cut(s) 12
BspTI CTTAAG 1 cut(s) 677
BsrFI RCCGGY 1 cut(s) 575
BsrI ACTGG 3 cut(s) 152, 838, 1078
BssAI RCCGGY 1 cut(s) 575
BssECI CCNNGG 3 cut(s) 113, 189, 615
BssSI CACGAG 1 cut(s) 143
BssT1I CCWWGG 1 cut(s) 189
Bst2BI CACGAG 1 cut(s) 143
Bst2UI CCWGG 2 cut(s) 424, 638
Bst4CI ACNGT 2 cut(s) 241, 644
Bst6I CTCTTC 1 cut(s) 570
BstAFI CTTAAG 1 cut(s) 677
BstC8I GCNNGC 2 cut(s) 577, 903
BstDEI CTNAG 1 cut(s) 291
BstDSI CCRYGG 1 cut(s) 113
BstEII GGTNACC 2 cut(s) 42, 184
BstF5I GGATG 5 cut(s) 25, 514, 732, 741, 785
BstFNI CGCG 2 cut(s) 252, 321
BstHHI GCGC 2 cut(s) 252, 321
BstMAI GTCTC 1 cut(s) 567
BstMWI GCNNNNNNNGC 2 cut(s) 554, 966
BstNI CCWGG 2 cut(s) 424, 638
BstNSI RCATGY 1 cut(s) 854
BstPI GGTNACC 2 cut(s) 42, 184
BstSCI CCNGG 4 cut(s) 15, 31, 422, 636
BstSLI GKGCMC 1 cut(s) 97
BstUI CGCG 2 cut(s) 252, 321
BstV1I GCAGC 5 cut(s) 421, 456, 544, 591, 1024
BstV2I GAAGAC 1 cut(s) 896
BstX2I RGATCY 4 cut(s) 159, 633, 840, 1054
BstXI CCANNNNNNTGG 2 cut(s) 706, 989
BstYI RGATCY 4 cut(s) 159, 633, 840, 1054
Bsu15I ATCGAT 2 cut(s) 176, 534
BsuRI GGCC 2 cut(s) 311, 698
BsuTUI ATCGAT 2 cut(s) 176, 534
BtgI CCRYGG 1 cut(s) 113
BtrI CACGTC 1 cut(s) 586
BtsCI GGATG 5 cut(s) 25, 514, 732, 741, 785
BtsI GCAGTG 1 cut(s) 95
BtsIMutI CAGTG 2 cut(s) 95, 159
Cac8I GCNNGC 2 cut(s) 577, 903
CfoI GCGC 2 cut(s) 252, 321
Cfr10I RCCGGY 1 cut(s) 575
Cfr13I GGNCC 1 cut(s) 592
ClaI ATCGAT 2 cut(s) 176, 534
CseI GACGC 1 cut(s) 549
Csp6I GTAC 3 cut(s) 13, 148, 237
CspCI CAANNNNNGTGG 2 cut(s) 735, 770
CviAII CATG 7 cut(s) 8, 406, 523, 604, 851, 860, 983
CviQI GTAC 3 cut(s) 13, 148, 237
DdeI CTNAG 1 cut(s) 291
Eam1104I CTCTTC 1 cut(s) 570
EarI CTCTTC 1 cut(s) 570
Ecl136II GAGCTC 1 cut(s) 60
Eco130I CCWWGG 1 cut(s) 189
Eco147I AGGCCT 1 cut(s) 311
Eco24I GRGCYC 3 cut(s) 62, 208, 1067
Eco47I GGWCC 1 cut(s) 592
Eco53kI GAGCTC 1 cut(s) 60
Eco91I GGTNACC 2 cut(s) 42, 184
EcoICRI GAGCTC 1 cut(s) 60
EcoO65I GGTNACC 2 cut(s) 42, 184
EcoRII CCWGG 2 cut(s) 422, 636
EcoT14I CCWWGG 1 cut(s) 189
EcoT38I GRGCYC 3 cut(s) 62, 208, 1067
ErhI CCWWGG 1 cut(s) 189
Esp3I CGTCTC 1 cut(s) 567
FaeI CATG 7 cut(s) 11, 409, 526, 607, 854, 863, 986
FaqI GGGAC 2 cut(s) 630, 1006
FatI CATG 7 cut(s) 7, 405, 522, 603, 850, 859, 982
FauI CCCGC 2 cut(s) 93, 439
FbaI TGATCA 1 cut(s) 811
Fnu4HI GCNGC 7 cut(s) 77, 435, 470, 558, 580, 961, 1038
FokI GGATG 5 cut(s) 32, 501, 728, 739, 772
FriOI GRGCYC 3 cut(s) 62, 208, 1067
Fsp4HI GCNGC 7 cut(s) 77, 435, 470, 558, 580, 961, 1038
FspBI CTAG 1 cut(s) 549
GlaI GCGC 2 cut(s) 251, 320
GluI GCNGC 7 cut(s) 77, 435, 470, 558, 580, 961, 1038
GsuI CTGGAG 1 cut(s) 406
HaeIII GGCC 2 cut(s) 311, 698
HapII CCGG 4 cut(s) 16, 32, 305, 576
HgaI GACGC 1 cut(s) 549
HhaI GCGC 2 cut(s) 252, 321
Hin1II CATG 7 cut(s) 11, 409, 526, 607, 854, 863, 986
Hin6I GCGC 2 cut(s) 250, 319
HinP1I GCGC 2 cut(s) 250, 319
HinfI GANTC 9 cut(s) 71, 299, 402, 419, 427, 450, 627, 652, 892
HpaII CCGG 4 cut(s) 16, 32, 305, 576
HphI GGTGA 4 cut(s) 36, 196, 252, 1072
Hpy166II GTNNAC 2 cut(s) 298, 592
Hpy188I TCNGA 3 cut(s) 277, 845, 1029
Hpy188III TCNNGA 5 cut(s) 171, 631, 703, 724, 886
Hpy8I GTNNAC 2 cut(s) 298, 592
Hpy99I CGWCG 2 cut(s) 277, 587
HpyAV CCTTC 4 cut(s) 273, 676, 679, 890
HpyCH4III ACNGT 2 cut(s) 241, 644
HpyCH4IV ACGT 3 cut(s) 540, 585, 780
HpyCH4V TGCA 3 cut(s) 603, 850, 969
HpyF10VI GCNNNNNNNGC 2 cut(s) 554, 966
HpyF3I CTNAG 1 cut(s) 291
HpySE526I ACGT 3 cut(s) 540, 585, 780
Hsp92II CATG 7 cut(s) 11, 409, 526, 607, 854, 863, 986
HspAI GCGC 2 cut(s) 250, 319
KpnI GGTACC 1 cut(s) 16
KroI GCCGGC 1 cut(s) 575
KroNI GCCGGC 1 cut(s) 577
Ksp22I TGATCA 1 cut(s) 811
LmnI GCTCC 6 cut(s) 4, 65, 211, 447, 611, 1045
Lsp1109I GCAGC 5 cut(s) 421, 456, 544, 591, 1024
LweI GCATC 3 cut(s) 226, 794, 947
MaeI CTAG 1 cut(s) 549
MaeII ACGT 3 cut(s) 540, 585, 780
MaeIII GTNAC 4 cut(s) 42, 184, 253, 416
MboII GAAGA 9 cut(s) 169, 557, 712, 742, 901, 925, 932, 966, 970
MflI RGATCY 4 cut(s) 159, 633, 840, 1054
MhlI GDGCHC 6 cut(s) 62, 97, 144, 208, 444, 1067
MluCI AATT 8 cut(s) 36, 225, 381, 499, 508, 807, 924, 948
MlyI GAGTC 4 cut(s) 80, 293, 413, 886
MmeI TCCRAC 2 cut(s) 255, 542
MroNI GCCGGC 1 cut(s) 575
MroXI GAANNNNTTC 1 cut(s) 362
MseI TTAA 1 cut(s) 678
MslI CAYNNNNRTG 3 cut(s) 49, 704, 987
MspA1I CMGCKG 2 cut(s) 434, 1037
MspCI CTTAAG 1 cut(s) 677
MspI CCGG 4 cut(s) 16, 32, 305, 576
MspR9I CCNGG 4 cut(s) 17, 33, 424, 638
MvaI CCWGG 2 cut(s) 424, 638
MvnI CGCG 2 cut(s) 252, 321
MwoI GCNNNNNNNGC 2 cut(s) 554, 966
NaeI GCCGGC 1 cut(s) 577
NciI CCSGG 2 cut(s) 17, 33
NgoMIV GCCGGC 1 cut(s) 575
NlaIII CATG 7 cut(s) 11, 409, 526, 607, 854, 863, 986
NlaIV GGNNCC 3 cut(s) 14, 207, 613
NmeAIII GCCGAG 1 cut(s) 640
NmuCI GTSAC 4 cut(s) 42, 184, 253, 416
NspI RCATGY 1 cut(s) 854
PceI AGGCCT 1 cut(s) 311
PcsI WCGNNNNNNNCGW 1 cut(s) 579
PdiI GCCGGC 1 cut(s) 577
PdmI GAANNNNTTC 1 cut(s) 362
PfeI GAWTC 5 cut(s) 402, 427, 450, 627, 652
PflFI GACNNNGTC 1 cut(s) 271
PfoI TCCNGGA 2 cut(s) 422, 636
PkrI GCNGC 7 cut(s) 78, 436, 471, 559, 581, 962, 1039
PleI GAGTC 4 cut(s) 79, 293, 413, 886
PpsI GAGTC 4 cut(s) 79, 293, 413, 886
Psp124BI GAGCTC 1 cut(s) 62
Psp6I CCWGG 2 cut(s) 422, 636
PspEI GGTNACC 2 cut(s) 42, 184
PspGI CCWGG 2 cut(s) 422, 636
PspN4I GGNNCC 3 cut(s) 14, 207, 613
PspPI GGNCC 1 cut(s) 592
PsuI RGATCY 4 cut(s) 159, 633, 840, 1054
PsyI GACNNNGTC 1 cut(s) 271
PvuII CAGCTG 1 cut(s) 1037
RsaI GTAC 3 cut(s) 14, 149, 238
RsaNI GTAC 3 cut(s) 13, 148, 237
RseI CAYNNNNRTG 3 cut(s) 49, 704, 987
SacI GAGCTC 1 cut(s) 62
SaqAI TTAA 1 cut(s) 678
SatI GCNGC 7 cut(s) 77, 435, 470, 558, 580, 961, 1038
Sau96I GGNCC 1 cut(s) 592
SchI GAGTC 4 cut(s) 80, 293, 413, 886
ScrFI CCNGG 4 cut(s) 17, 33, 424, 638
SduI GDGCHC 6 cut(s) 62, 97, 144, 208, 444, 1067
SfaNI GCATC 3 cut(s) 226, 794, 947
SinI GGWCC 1 cut(s) 592
SmiMI CAYNNNNRTG 3 cut(s) 49, 704, 987
SmlI CTYRAG 3 cut(s) 677, 884, 896
SmoI CTYRAG 3 cut(s) 677, 884, 896
Sse9I AATT 8 cut(s) 36, 225, 381, 499, 508, 807, 924, 948
SseBI AGGCCT 1 cut(s) 311
SsiI CCGC 6 cut(s) 77, 100, 321, 399, 432, 961
SspMI CTAG 1 cut(s) 549
SstI GAGCTC 1 cut(s) 62
StuI AGGCCT 1 cut(s) 311
StyD4I CCNGG 4 cut(s) 15, 31, 422, 636
StyI CCWWGG 1 cut(s) 189
TaaI ACNGT 2 cut(s) 241, 644
TaiI ACGT 3 cut(s) 543, 588, 783
TaqI TCGA 5 cut(s) 176, 223, 266, 534, 672
TasI AATT 8 cut(s) 36, 225, 381, 499, 508, 807, 924, 948
TauI GCSGC 2 cut(s) 79, 963
TfiI GAWTC 5 cut(s) 402, 427, 450, 627, 652
Tru1I TTAA 1 cut(s) 678
Tru9I TTAA 1 cut(s) 678
TscAI CASTG 2 cut(s) 102, 159
TseFI GTSAC 4 cut(s) 42, 184, 253, 416
TseI GCWGC 5 cut(s) 434, 469, 557, 579, 1037
Tsp45I GTSAC 4 cut(s) 42, 184, 253, 416
TspDTI ATGAA 2 cut(s) 743, 791
TspGWI ACGGA 2 cut(s) 52, 130
TspRI CASTG 2 cut(s) 102, 159
Tth111I GACNNNGTC 1 cut(s) 271
Vha464I CTTAAG 1 cut(s) 677
VpaK11BI GGWCC 1 cut(s) 592
XapI RAATTY 2 cut(s) 225, 924
XceI RCATGY 1 cut(s) 854
XcmI CCANNNNNNNNNTGG 2 cut(s) 159, 778
XmnI GAANNNNTTC 1 cut(s) 362
XspI CTAG 1 cut(s) 549
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.