Homeodomain
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 95 |
| AcsI | RAATTY | 1 cut(s) | 175 |
| AgsI | TTSAA | 3 cut(s) | 113, 175, 335 |
| AluBI | AGCT | 1 cut(s) | 107 |
| AluI | AGCT | 1 cut(s) | 107 |
| Alw26I | GTCTC | 1 cut(s) | 255 |
| ApoI | RAATTY | 1 cut(s) | 175 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 160, 192, 301, 333 |
| AspLEI | GCGC | 1 cut(s) | 96 |
| AspS9I | GGNCC | 2 cut(s) | 22, 56 |
| AsuC2I | CCSGG | 2 cut(s) | 12, 326 |
| AsuHPI | GGTGA | 1 cut(s) | 26 |
| AvaII | GGWCC | 2 cut(s) | 22, 56 |
| AxyI | CCTNAGG | 1 cut(s) | 164 |
| BcnI | CCSGG | 2 cut(s) | 12, 326 |
| BcoDI | GTCTC | 1 cut(s) | 255 |
| Bme1390I | CCNGG | 2 cut(s) | 12, 326 |
| Bme18I | GGWCC | 2 cut(s) | 22, 56 |
| BmgT120I | GGNCC | 2 cut(s) | 22, 56 |
| BmiI | GGNNCC | 1 cut(s) | 57 |
| BmrFI | CCNGG | 2 cut(s) | 12, 326 |
| BpuMI | CCSGG | 2 cut(s) | 12, 326 |
| BsaJI | CCNNGG | 1 cut(s) | 324 |
| Bse1I | ACTGG | 1 cut(s) | 65 |
| Bse21I | CCTNAGG | 1 cut(s) | 164 |
| BseDI | CCNNGG | 1 cut(s) | 324 |
| BseMII | CTCAG | 1 cut(s) | 257 |
| BseNI | ACTGG | 1 cut(s) | 65 |
| BsiSI | CCGG | 2 cut(s) | 11, 326 |
| BsmAI | GTCTC | 1 cut(s) | 255 |
| BspCNI | CTCAG | 1 cut(s) | 258 |
| BspLI | GGNNCC | 1 cut(s) | 57 |
| BsrI | ACTGG | 1 cut(s) | 65 |
| BssECI | CCNNGG | 1 cut(s) | 324 |
| Bst4CI | ACNGT | 2 cut(s) | 83, 284 |
| BstDEI | CTNAG | 2 cut(s) | 164, 266 |
| BstHHI | GCGC | 1 cut(s) | 96 |
| BstMAI | GTCTC | 1 cut(s) | 255 |
| BstSCI | CCNGG | 2 cut(s) | 10, 324 |
| Bsu36I | CCTNAGG | 1 cut(s) | 164 |
| CfoI | GCGC | 1 cut(s) | 96 |
| Cfr13I | GGNCC | 2 cut(s) | 22, 56 |
| CviAII | CATG | 1 cut(s) | 260 |
| CviJI | RGCY | 2 cut(s) | 107, 162 |
| CviKI_1 | RGCY | 2 cut(s) | 107, 162 |
| DdeI | CTNAG | 2 cut(s) | 164, 266 |
| Eco32I | GATATC | 1 cut(s) | 239 |
| Eco47I | GGWCC | 2 cut(s) | 22, 56 |
| Eco81I | CCTNAGG | 1 cut(s) | 164 |
| EcoRV | GATATC | 1 cut(s) | 239 |
| FaeI | CATG | 1 cut(s) | 263 |
| FaiI | YATR | 3 cut(s) | 261, 289, 298 |
| FatI | CATG | 1 cut(s) | 259 |
| FspI | TGCGCA | 1 cut(s) | 95 |
| GlaI | GCGC | 1 cut(s) | 95 |
| HapII | CCGG | 2 cut(s) | 11, 326 |
| HhaI | GCGC | 1 cut(s) | 96 |
| Hin1II | CATG | 1 cut(s) | 263 |
| Hin6I | GCGC | 1 cut(s) | 94 |
| HinP1I | GCGC | 1 cut(s) | 94 |
| HinfI | GANTC | 2 cut(s) | 113, 193 |
| HpaII | CCGG | 2 cut(s) | 11, 326 |
| HphI | GGTGA | 1 cut(s) | 26 |
| Hpy188III | TCNNGA | 2 cut(s) | 197, 242 |
| HpyCH4III | ACNGT | 2 cut(s) | 83, 284 |
| HpyCH4V | TGCA | 2 cut(s) | 47, 307 |
| HpyF3I | CTNAG | 2 cut(s) | 164, 266 |
| Hsp92II | CATG | 1 cut(s) | 263 |
| HspAI | GCGC | 1 cut(s) | 94 |
| LpnPI | CCDG | 4 cut(s) | 24, 63, 78, 227 |
| MaeIII | GTNAC | 2 cut(s) | 6, 317 |
| MluCI | AATT | 2 cut(s) | 175, 272 |
| MnlI | CCTC | 3 cut(s) | 13, 46, 261 |
| MseI | TTAA | 1 cut(s) | 38 |
| MspI | CCGG | 2 cut(s) | 11, 326 |
| MspR9I | CCNGG | 2 cut(s) | 12, 326 |
| NciI | CCSGG | 2 cut(s) | 12, 326 |
| NlaIII | CATG | 1 cut(s) | 263 |
| NlaIV | GGNNCC | 1 cut(s) | 57 |
| NmuCI | GTSAC | 1 cut(s) | 317 |
| NsbI | TGCGCA | 1 cut(s) | 95 |
| PfeI | GAWTC | 2 cut(s) | 113, 193 |
| PspN4I | GGNNCC | 1 cut(s) | 57 |
| PspPI | GGNCC | 2 cut(s) | 22, 56 |
| SaqAI | TTAA | 1 cut(s) | 38 |
| Sau96I | GGNCC | 2 cut(s) | 22, 56 |
| ScrFI | CCNGG | 2 cut(s) | 12, 326 |
| SetI | ASST | 3 cut(s) | 24, 109, 314 |
| SinI | GGWCC | 2 cut(s) | 22, 56 |
| Sse9I | AATT | 2 cut(s) | 175, 272 |
| StyD4I | CCNGG | 2 cut(s) | 10, 324 |
| TaaI | ACNGT | 2 cut(s) | 83, 284 |
| TaqI | TCGA | 3 cut(s) | 116, 191, 196 |
| TasI | AATT | 2 cut(s) | 175, 272 |
| TfiI | GAWTC | 2 cut(s) | 113, 193 |
| Tru1I | TTAA | 1 cut(s) | 38 |
| Tru9I | TTAA | 1 cut(s) | 38 |
| TseFI | GTSAC | 1 cut(s) | 317 |
| Tsp45I | GTSAC | 1 cut(s) | 317 |
| TspDTI | ATGAA | 1 cut(s) | 276 |
| TspGWI | ACGGA | 1 cut(s) | 14 |
| VpaK11BI | GGWCC | 2 cut(s) | 22, 56 |
| XapI | RAATTY | 1 cut(s) | 175 |