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| Species | Orthologous Gene IDs |
|---|---|
| rosa_multiflora | Rmu_sc0004911.1_g000001 Rmu_sc0031681.1_g000001 Rmu_sc0037657.1_g000001 |
| rosa_roxburghii | Rroxscaffold_1G00038110 |
| rosa_samantha | Rh5CG324200 Rh5DG192400 Rh5DG507500 Rh6AG285100 Rh6CG150400 Rh6CG287800 Rh6DG280600 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 1 cut(s) | 50 |
| AciI | CCGC | 3 cut(s) | 50, 53, 143 |
| AcsI | RAATTY | 1 cut(s) | 194 |
| AcuI | CTGAAG | 1 cut(s) | 191 |
| AgsI | TTSAA | 5 cut(s) | 115, 161, 181, 194, 200 |
| AjnI | CCWGG | 1 cut(s) | 211 |
| AluBI | AGCT | 2 cut(s) | 17, 190 |
| AluI | AGCT | 2 cut(s) | 17, 190 |
| Alw26I | GTCTC | 1 cut(s) | 72 |
| ApoI | RAATTY | 1 cut(s) | 194 |
| AsuHPI | GGTGA | 1 cut(s) | 98 |
| BanII | GRGCYC | 1 cut(s) | 219 |
| BbvCI | CCTCAGC | 1 cut(s) | 18 |
| BceAI | ACGGC | 1 cut(s) | 134 |
| BciT130I | CCWGG | 1 cut(s) | 213 |
| BcoDI | GTCTC | 1 cut(s) | 72 |
| BisI | GCNGC | 1 cut(s) | 51 |
| BlsI | GCNGC | 1 cut(s) | 52 |
| Bme1390I | CCNGG | 1 cut(s) | 213 |
| BmrFI | CCNGG | 1 cut(s) | 213 |
| Bpu10I | CCTNAGC | 1 cut(s) | 18 |
| BsaJI | CCNNGG | 1 cut(s) | 212 |
| BsaWI | WCCGGW | 1 cut(s) | 169 |
| BseBI | CCWGG | 1 cut(s) | 213 |
| BseDI | CCNNGG | 1 cut(s) | 212 |
| BseMII | CTCAG | 1 cut(s) | 9 |
| BseRI | GAGGAG | 1 cut(s) | 90 |
| Bsh1236I | CGCG | 1 cut(s) | 50 |
| Bsh1285I | CGRYCG | 1 cut(s) | 147 |
| BsiEI | CGRYCG | 1 cut(s) | 147 |
| BsiSI | CCGG | 1 cut(s) | 170 |
| BsmAI | GTCTC | 1 cut(s) | 72 |
| BsmBI | CGTCTC | 1 cut(s) | 72 |
| Bsp1286I | GDGCHC | 1 cut(s) | 219 |
| BspACI | CCGC | 3 cut(s) | 50, 53, 143 |
| BspCNI | CTCAG | 1 cut(s) | 10 |
| BspFNI | CGCG | 1 cut(s) | 50 |
| BssECI | CCNNGG | 1 cut(s) | 212 |
| Bst2UI | CCWGG | 1 cut(s) | 213 |
| Bst4CI | ACNGT | 1 cut(s) | 83 |
| BstDEI | CTNAG | 2 cut(s) | 11, 18 |
| BstFNI | CGCG | 1 cut(s) | 50 |
| BstMAI | GTCTC | 1 cut(s) | 72 |
| BstMCI | CGRYCG | 1 cut(s) | 147 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 47 |
| BstNI | CCWGG | 1 cut(s) | 213 |
| BstSCI | CCNGG | 1 cut(s) | 211 |
| BstUI | CGCG | 1 cut(s) | 50 |
| CviJI | RGCY | 5 cut(s) | 17, 129, 190, 211, 217 |
| CviKI_1 | RGCY | 5 cut(s) | 17, 129, 190, 211, 217 |
| DdeI | CTNAG | 2 cut(s) | 11, 18 |
| Eco24I | GRGCYC | 1 cut(s) | 219 |
| Eco57I | CTGAAG | 1 cut(s) | 191 |
| EcoRII | CCWGG | 1 cut(s) | 211 |
| EcoT38I | GRGCYC | 1 cut(s) | 219 |
| Esp3I | CGTCTC | 1 cut(s) | 72 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 113, 145 |
| Fnu4HI | GCNGC | 1 cut(s) | 51 |
| FriOI | GRGCYC | 1 cut(s) | 219 |
| Fsp4HI | GCNGC | 1 cut(s) | 51 |
| GluI | GCNGC | 1 cut(s) | 51 |
| HapII | CCGG | 1 cut(s) | 170 |
| HincII | GTYRAC | 1 cut(s) | 100 |
| HindII | GTYRAC | 1 cut(s) | 100 |
| HinfI | GANTC | 3 cut(s) | 45, 166, 177 |
| HpaII | CCGG | 1 cut(s) | 170 |
| HphI | GGTGA | 1 cut(s) | 98 |
| Hpy166II | GTNNAC | 1 cut(s) | 100 |
| Hpy188I | TCNGA | 1 cut(s) | 221 |
| Hpy188III | TCNNGA | 1 cut(s) | 59 |
| Hpy8I | GTNNAC | 1 cut(s) | 100 |
| Hpy99I | CGWCG | 2 cut(s) | 71, 74 |
| HpyAV | CCTTC | 1 cut(s) | 99 |
| HpyCH4III | ACNGT | 1 cut(s) | 83 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 47 |
| HpyF3I | CTNAG | 2 cut(s) | 11, 18 |
| LpnPI | CCDG | 4 cut(s) | 27, 44, 183, 198 |
| MaeIII | GTNAC | 1 cut(s) | 86 |
| MboII | GAAGA | 1 cut(s) | 197 |
| MhlI | GDGCHC | 1 cut(s) | 219 |
| MluCI | AATT | 2 cut(s) | 110, 194 |
| MlyI | GAGTC | 2 cut(s) | 54, 175 |
| MnlI | CCTC | 5 cut(s) | 13, 22, 31, 68, 148 |
| MseI | TTAA | 1 cut(s) | 6 |
| MspI | CCGG | 1 cut(s) | 170 |
| MspR9I | CCNGG | 1 cut(s) | 213 |
| MvaI | CCWGG | 1 cut(s) | 213 |
| MvnI | CGCG | 1 cut(s) | 50 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 47 |
| NmuCI | GTSAC | 1 cut(s) | 86 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 87 |
| PfeI | GAWTC | 1 cut(s) | 177 |
| PflFI | GACNNNGTC | 1 cut(s) | 92 |
| PkrI | GCNGC | 1 cut(s) | 52 |
| PleI | GAGTC | 2 cut(s) | 53, 174 |
| PpsI | GAGTC | 2 cut(s) | 53, 174 |
| Psp6I | CCWGG | 1 cut(s) | 211 |
| PspGI | CCWGG | 1 cut(s) | 211 |
| PsyI | GACNNNGTC | 1 cut(s) | 92 |
| SaqAI | TTAA | 1 cut(s) | 6 |
| SatI | GCNGC | 1 cut(s) | 51 |
| SchI | GAGTC | 2 cut(s) | 54, 175 |
| ScrFI | CCNGG | 1 cut(s) | 213 |
| SduI | GDGCHC | 1 cut(s) | 219 |
| SetI | ASST | 5 cut(s) | 19, 24, 33, 159, 192 |
| SgeI | CNNG | 6 cut(s) | 54, 61, 71, 145, 182, 203 |
| Sse9I | AATT | 2 cut(s) | 110, 194 |
| SsiI | CCGC | 3 cut(s) | 50, 53, 143 |
| StyD4I | CCNGG | 1 cut(s) | 211 |
| TaaI | ACNGT | 1 cut(s) | 83 |
| TasI | AATT | 2 cut(s) | 110, 194 |
| TauI | GCSGC | 1 cut(s) | 53 |
| TfiI | GAWTC | 1 cut(s) | 177 |
| Tru1I | TTAA | 1 cut(s) | 6 |
| Tru9I | TTAA | 1 cut(s) | 6 |
| TseFI | GTSAC | 1 cut(s) | 86 |
| Tsp45I | GTSAC | 1 cut(s) | 86 |
| TspGWI | ACGGA | 2 cut(s) | 87, 117 |
| Tth111I | GACNNNGTC | 1 cut(s) | 92 |
| XapI | RAATTY | 1 cut(s) | 194 |