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| Species | Orthologous Gene IDs |
|---|---|
| rosa_multiflora | Rmu_sc0004911.1_g000001 Rmu_sc0031681.1_g000001 Rmu_sc0037657.1_g000001 |
| rosa_roxburghii | Rroxscaffold_1G00038110 |
| rosa_samantha | Rh5CG324200 Rh5DG192400 Rh5DG507500 Rh6AG285100 Rh6CG150400 Rh6CG287800 Rh6DG280600 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 2 cut(s) | 8, 59 |
| AfaI | GTAC | 1 cut(s) | 54 |
| AflIII | ACRYGT | 1 cut(s) | 153 |
| AgsI | TTSAA | 2 cut(s) | 121, 178 |
| AluBI | AGCT | 2 cut(s) | 23, 28 |
| AluI | AGCT | 2 cut(s) | 23, 28 |
| Alw21I | GWGCWC | 1 cut(s) | 30 |
| Alw26I | GTCTC | 2 cut(s) | 78, 165 |
| AsuHPI | GGTGA | 2 cut(s) | 22, 104 |
| BanII | GRGCYC | 1 cut(s) | 30 |
| BauI | CACGAG | 1 cut(s) | 29 |
| BbsI | GAAGAC | 1 cut(s) | 20 |
| Bbv12I | GWGCWC | 1 cut(s) | 30 |
| BccI | CCATC | 3 cut(s) | 71, 101, 196 |
| BcoDI | GTCTC | 2 cut(s) | 78, 165 |
| BlpI | GCTNAGC | 1 cut(s) | 24 |
| BpiI | GAAGAC | 1 cut(s) | 20 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 24 |
| BsaI | GGTCTC | 1 cut(s) | 165 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 176, 206 |
| BseGI | GGATG | 1 cut(s) | 188 |
| BseMII | CTCAG | 1 cut(s) | 15 |
| BseRI | GAGGAG | 1 cut(s) | 96 |
| BsiHKAI | GWGCWC | 1 cut(s) | 30 |
| BsmAI | GTCTC | 2 cut(s) | 78, 165 |
| BsmBI | CGTCTC | 1 cut(s) | 78 |
| Bso31I | GGTCTC | 1 cut(s) | 165 |
| Bsp1286I | GDGCHC | 1 cut(s) | 30 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 24 |
| BspACI | CCGC | 2 cut(s) | 8, 59 |
| BspCNI | CTCAG | 1 cut(s) | 16 |
| BspTNI | GGTCTC | 1 cut(s) | 165 |
| BssSI | CACGAG | 1 cut(s) | 29 |
| Bst2BI | CACGAG | 1 cut(s) | 29 |
| Bst4CI | ACNGT | 1 cut(s) | 89 |
| BstDEI | CTNAG | 1 cut(s) | 24 |
| BstF5I | GGATG | 1 cut(s) | 188 |
| BstMAI | GTCTC | 2 cut(s) | 78, 165 |
| BstNSI | RCATGY | 1 cut(s) | 157 |
| BstV2I | GAAGAC | 1 cut(s) | 20 |
| BtsCI | GGATG | 1 cut(s) | 188 |
| Csp6I | GTAC | 1 cut(s) | 53 |
| CviAII | CATG | 1 cut(s) | 154 |
| CviJI | RGCY | 2 cut(s) | 23, 28 |
| CviKI_1 | RGCY | 2 cut(s) | 23, 28 |
| CviQI | GTAC | 1 cut(s) | 53 |
| DdeI | CTNAG | 1 cut(s) | 24 |
| Ecl136II | GAGCTC | 1 cut(s) | 28 |
| Eco24I | GRGCYC | 1 cut(s) | 30 |
| Eco31I | GGTCTC | 1 cut(s) | 165 |
| Eco53kI | GAGCTC | 1 cut(s) | 28 |
| EcoICRI | GAGCTC | 1 cut(s) | 28 |
| EcoT38I | GRGCYC | 1 cut(s) | 30 |
| Esp3I | CGTCTC | 1 cut(s) | 78 |
| FaeI | CATG | 1 cut(s) | 157 |
| FaiI | YATR | 2 cut(s) | 155, 169 |
| FatI | CATG | 1 cut(s) | 153 |
| FokI | GGATG | 1 cut(s) | 175 |
| FriOI | GRGCYC | 1 cut(s) | 30 |
| Hin1II | CATG | 1 cut(s) | 157 |
| HphI | GGTGA | 2 cut(s) | 22, 104 |
| Hpy188III | TCNNGA | 1 cut(s) | 65 |
| HpyAV | CCTTC | 1 cut(s) | 105 |
| HpyCH4III | ACNGT | 1 cut(s) | 89 |
| HpyF3I | CTNAG | 1 cut(s) | 24 |
| Hsp92II | CATG | 1 cut(s) | 157 |
| LpnPI | CCDG | 2 cut(s) | 50, 69 |
| MaeIII | GTNAC | 1 cut(s) | 92 |
| MboII | GAAGA | 1 cut(s) | 25 |
| MhlI | GDGCHC | 1 cut(s) | 30 |
| MluCI | AATT | 1 cut(s) | 116 |
| MmeI | TCCRAC | 1 cut(s) | 116 |
| MnlI | CCTC | 5 cut(s) | 28, 37, 74, 202, 210 |
| MseI | TTAA | 1 cut(s) | 208 |
| MspA1I | CMGCKG | 2 cut(s) | 8, 59 |
| NlaIII | CATG | 1 cut(s) | 157 |
| NmuCI | GTSAC | 1 cut(s) | 92 |
| NspI | RCATGY | 1 cut(s) | 157 |
| PciI | ACATGT | 1 cut(s) | 153 |
| PflFI | GACNNNGTC | 1 cut(s) | 98 |
| PscI | ACATGT | 1 cut(s) | 153 |
| Psp124BI | GAGCTC | 1 cut(s) | 30 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 45, 77 |
| PsyI | GACNNNGTC | 1 cut(s) | 98 |
| RsaI | GTAC | 1 cut(s) | 54 |
| RsaNI | GTAC | 1 cut(s) | 53 |
| SacI | GAGCTC | 1 cut(s) | 30 |
| SaqAI | TTAA | 1 cut(s) | 208 |
| SduI | GDGCHC | 1 cut(s) | 30 |
| SetI | ASST | 4 cut(s) | 25, 30, 39, 48 |
| SgeI | CNNG | 6 cut(s) | 41, 43, 68, 77, 166, 176 |
| Sse9I | AATT | 1 cut(s) | 116 |
| SsiI | CCGC | 2 cut(s) | 8, 59 |
| SstI | GAGCTC | 1 cut(s) | 30 |
| TaaI | ACNGT | 1 cut(s) | 89 |
| TasI | AATT | 1 cut(s) | 116 |
| Tru1I | TTAA | 1 cut(s) | 208 |
| Tru9I | TTAA | 1 cut(s) | 208 |
| TseFI | GTSAC | 1 cut(s) | 92 |
| Tsp45I | GTSAC | 1 cut(s) | 92 |
| Tth111I | GACNNNGTC | 1 cut(s) | 98 |
| XceI | RCATGY | 1 cut(s) | 157 |