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| Species | Orthologous Gene IDs |
|---|---|
| rosa_multiflora | Rmu_sc0004911.1_g000001 Rmu_sc0031681.1_g000001 Rmu_sc0037657.1_g000001 |
| rosa_roxburghii | Rroxscaffold_1G00038110 |
| rosa_samantha | Rh5CG324200 Rh5DG192400 Rh5DG507500 Rh6AG285100 Rh6CG150400 Rh6CG287800 Rh6DG280600 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 2 cut(s) | 53, 204 |
| AfaI | GTAC | 1 cut(s) | 163 |
| AflIII | ACRYGT | 1 cut(s) | 147 |
| AgsI | TTSAA | 1 cut(s) | 115 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 39, 71 |
| AluBI | AGCT | 1 cut(s) | 17 |
| AluI | AGCT | 1 cut(s) | 17 |
| Alw26I | GTCTC | 2 cut(s) | 72, 159 |
| ApeKI | GCWGC | 1 cut(s) | 17 |
| AspS9I | GGNCC | 1 cut(s) | 47 |
| AsuHPI | GGTGA | 1 cut(s) | 98 |
| AvaII | GGWCC | 1 cut(s) | 47 |
| BbvI | GCAGC | 1 cut(s) | 4 |
| BccI | CCATC | 1 cut(s) | 95 |
| BcoDI | GTCTC | 2 cut(s) | 72, 159 |
| BfaI | CTAG | 1 cut(s) | 229 |
| BisI | GCNGC | 1 cut(s) | 18 |
| BlsI | GCNGC | 1 cut(s) | 19 |
| Bme18I | GGWCC | 1 cut(s) | 47 |
| BmgT120I | GGNCC | 1 cut(s) | 47 |
| BsaI | GGTCTC | 1 cut(s) | 159 |
| Bse118I | RCCGGY | 1 cut(s) | 49 |
| BseRI | GAGGAG | 1 cut(s) | 90 |
| BseXI | GCAGC | 1 cut(s) | 4 |
| BsiSI | CCGG | 1 cut(s) | 50 |
| BsmAI | GTCTC | 2 cut(s) | 72, 159 |
| BsmBI | CGTCTC | 1 cut(s) | 72 |
| BsmI | GAATGC | 1 cut(s) | 185 |
| Bso31I | GGTCTC | 1 cut(s) | 159 |
| BspACI | CCGC | 2 cut(s) | 53, 204 |
| BspTNI | GGTCTC | 1 cut(s) | 159 |
| BsrFI | RCCGGY | 1 cut(s) | 49 |
| BssAI | RCCGGY | 1 cut(s) | 49 |
| Bst4CI | ACNGT | 1 cut(s) | 83 |
| BstDEI | CTNAG | 2 cut(s) | 11, 158 |
| BstMAI | GTCTC | 2 cut(s) | 72, 159 |
| BstNSI | RCATGY | 1 cut(s) | 151 |
| BstV1I | GCAGC | 1 cut(s) | 4 |
| Cfr10I | RCCGGY | 1 cut(s) | 49 |
| Cfr13I | GGNCC | 1 cut(s) | 47 |
| Csp6I | GTAC | 1 cut(s) | 162 |
| CviAII | CATG | 3 cut(s) | 25, 148, 169 |
| CviJI | RGCY | 1 cut(s) | 17 |
| CviKI_1 | RGCY | 1 cut(s) | 17 |
| CviQI | GTAC | 1 cut(s) | 162 |
| DdeI | CTNAG | 2 cut(s) | 11, 158 |
| Eco31I | GGTCTC | 1 cut(s) | 159 |
| Eco47I | GGWCC | 1 cut(s) | 47 |
| Esp3I | CGTCTC | 1 cut(s) | 72 |
| FaeI | CATG | 3 cut(s) | 28, 151, 172 |
| FaiI | YATR | 4 cut(s) | 26, 149, 170, 194 |
| FatI | CATG | 3 cut(s) | 24, 147, 168 |
| FauI | CCCGC | 1 cut(s) | 197 |
| Fnu4HI | GCNGC | 1 cut(s) | 18 |
| Fsp4HI | GCNGC | 1 cut(s) | 18 |
| FspBI | CTAG | 1 cut(s) | 229 |
| GluI | GCNGC | 1 cut(s) | 18 |
| HapII | CCGG | 1 cut(s) | 50 |
| Hin1II | CATG | 3 cut(s) | 28, 151, 172 |
| HinfI | GANTC | 2 cut(s) | 209, 225 |
| HpaII | CCGG | 1 cut(s) | 50 |
| HphI | GGTGA | 1 cut(s) | 98 |
| Hpy188I | TCNGA | 1 cut(s) | 220 |
| Hpy188III | TCNNGA | 1 cut(s) | 59 |
| Hpy99I | CGWCG | 2 cut(s) | 71, 74 |
| HpyAV | CCTTC | 1 cut(s) | 99 |
| HpyCH4III | ACNGT | 1 cut(s) | 83 |
| HpyF3I | CTNAG | 2 cut(s) | 11, 158 |
| Hsp92II | CATG | 3 cut(s) | 28, 151, 172 |
| LpnPI | CCDG | 3 cut(s) | 27, 44, 63 |
| Lsp1109I | GCAGC | 1 cut(s) | 4 |
| MaeI | CTAG | 1 cut(s) | 229 |
| MaeIII | GTNAC | 1 cut(s) | 86 |
| MluCI | AATT | 1 cut(s) | 110 |
| MmeI | TCCRAC | 1 cut(s) | 110 |
| MnlI | CCTC | 5 cut(s) | 22, 31, 38, 68, 166 |
| MseI | TTAA | 1 cut(s) | 6 |
| MslI | CAYNNNNRTG | 1 cut(s) | 29 |
| MspI | CCGG | 1 cut(s) | 50 |
| Mva1269I | GAATGC | 1 cut(s) | 185 |
| NlaIII | CATG | 3 cut(s) | 28, 151, 172 |
| NmuCI | GTSAC | 1 cut(s) | 86 |
| NspI | RCATGY | 1 cut(s) | 151 |
| PciI | ACATGT | 1 cut(s) | 147 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 87 |
| PctI | GAATGC | 1 cut(s) | 185 |
| PfeI | GAWTC | 1 cut(s) | 209 |
| PflFI | GACNNNGTC | 1 cut(s) | 92 |
| PkrI | GCNGC | 1 cut(s) | 19 |
| PscI | ACATGT | 1 cut(s) | 147 |
| PspPI | GGNCC | 1 cut(s) | 47 |
| PsyI | GACNNNGTC | 1 cut(s) | 92 |
| RsaI | GTAC | 1 cut(s) | 163 |
| RsaNI | GTAC | 1 cut(s) | 162 |
| RseI | CAYNNNNRTG | 1 cut(s) | 29 |
| SaqAI | TTAA | 1 cut(s) | 6 |
| SatI | GCNGC | 1 cut(s) | 18 |
| Sau96I | GGNCC | 1 cut(s) | 47 |
| SetI | ASST | 3 cut(s) | 19, 33, 218 |
| SgeI | CNNG | 8 cut(s) | 37, 54, 62, 71, 160, 181, 217, 225 |
| SinI | GGWCC | 1 cut(s) | 47 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 29 |
| Sse9I | AATT | 1 cut(s) | 110 |
| SsiI | CCGC | 2 cut(s) | 53, 204 |
| SspMI | CTAG | 1 cut(s) | 229 |
| TaaI | ACNGT | 1 cut(s) | 83 |
| TasI | AATT | 1 cut(s) | 110 |
| TatI | WGTACW | 1 cut(s) | 161 |
| TfiI | GAWTC | 1 cut(s) | 209 |
| Tru1I | TTAA | 1 cut(s) | 6 |
| Tru9I | TTAA | 1 cut(s) | 6 |
| TseFI | GTSAC | 1 cut(s) | 86 |
| TseI | GCWGC | 1 cut(s) | 17 |
| Tsp45I | GTSAC | 1 cut(s) | 86 |
| TspGWI | ACGGA | 1 cut(s) | 87 |
| Tth111I | GACNNNGTC | 1 cut(s) | 92 |
| VpaK11BI | GGWCC | 1 cut(s) | 47 |
| XceI | RCATGY | 1 cut(s) | 151 |
| XspI | CTAG | 1 cut(s) | 229 |