Rh6AG066800

3-oxo-Delta(4,5)-steroid 5-beta-reductase-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6A
OG0018197
Physical Location & Seq
Reverse (-)
9778265 .. 9778815
551 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6AG066800.1

Sequence Viewer

Length: 471 bp
ATGAGTTGGTGGTGGGCAGGAGCCATAGGAGCTGCAAAGAAAAAGTTTGATCCAGACGATGCACCAACCGAGTACCAGAGCGTGGCCCTGACACTTGGGGTCACCGGAATCGTCGGAAACAGCCTCGCCGAGAATCTCCCACTTGCCGATCGCGACACTCCCAGCGGGCCGTGGAAGGTCTACGGCGTGGCCCGGAGACCCCGCCCGCAGTGGAACGCTGACCGCCCGATTCAGTACATCCAGTGTGACCTCTCTGACTCTAAACAGACAGAGGCAGAGCTGTCCCAGCTGACTGATGTCACTCACATTTTTTATGTGATATGGGCGAGCAAGCCAACTGAAGCTGAGAACTGTGAGGCTAATGGGAAGATGTTGAGCAATGTGTTGAATGCTGTGATCCCAAACGCGCCGAATTTGCAGCACATATATATGTATGCAGGCGGGTCGGAAACACTACTTAGGTTCGTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Epimerase

Protein Analysis

156

Amino Acids

17.25

Weight (kDa)

5.1

Isoelectric Point (pI)

44.74

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 82
AccI GTMKAC 1 cut(s) 180
AccII CGCG 2 cut(s) 153, 407
AciI CCGC 5 cut(s) 165, 202, 206, 223, 441
AclWI GGATC 2 cut(s) 44, 391
AcsI RAATTY 1 cut(s) 412
AcuI CTGAAG 1 cut(s) 360
AfaI GTAC 2 cut(s) 74, 236
AfiI CCNNNNNNNGG 1 cut(s) 82
AgsI TTSAA 1 cut(s) 388
AluBI AGCT 4 cut(s) 32, 280, 289, 344
AluI AGCT 4 cut(s) 32, 280, 289, 344
Alw26I GTCTC 1 cut(s) 190
AlwI GGATC 2 cut(s) 44, 391
AoxI GGCC 3 cut(s) 84, 167, 189
ApeKI GCWGC 2 cut(s) 32, 418
ApoI RAATTY 1 cut(s) 412
AspLEI GCGC 1 cut(s) 409
AspS9I GGNCC 3 cut(s) 85, 167, 190
AsuC2I CCSGG 1 cut(s) 193
AsuHPI GGTGA 1 cut(s) 94
BbvI GCAGC 2 cut(s) 19, 430
BceAI ACGGC 2 cut(s) 154, 199
BcgI CGANNNNNNTGC 2 cut(s) 426, 460
BcnI CCSGG 1 cut(s) 193
BcoDI GTCTC 1 cut(s) 190
BisI GCNGC 2 cut(s) 33, 419
BlsI GCNGC 2 cut(s) 34, 420
Bme1390I CCNGG 1 cut(s) 193
BmgT120I GGNCC 3 cut(s) 85, 167, 190
BmiI GGNNCC 1 cut(s) 22
BmrFI CCNGG 1 cut(s) 193
BmsI GCATC 1 cut(s) 49
BoxI GACNNNNGTC 1 cut(s) 296
BpuMI CCSGG 1 cut(s) 193
BsaI GGTCTC 1 cut(s) 190
BsaJI CCNNGG 1 cut(s) 170
BsaWI WCCGGW 1 cut(s) 104
Bsc4I CCNNNNNNNGG 1 cut(s) 82
Bse1I ACTGG 1 cut(s) 241
Bse3DI GCAATG 1 cut(s) 385
BseDI CCNNGG 1 cut(s) 170
BseGI GGATG 1 cut(s) 237
BseLI CCNNNNNNNGG 1 cut(s) 82
BseMI GCAATG 1 cut(s) 385
BseMII CTCAG 1 cut(s) 336
BseNI ACTGG 1 cut(s) 241
BseXI GCAGC 2 cut(s) 19, 430
BseYI CCCAGC 2 cut(s) 161, 285
Bsh1236I CGCG 2 cut(s) 153, 407
Bsh1285I CGRYCG 1 cut(s) 151
BshFI GGCC 3 cut(s) 86, 169, 191
BsiEI CGRYCG 1 cut(s) 151
BsiSI CCGG 2 cut(s) 105, 193
BslFI GGGAC 1 cut(s) 268
BslI CCNNNNNNNGG 1 cut(s) 82
BsmAI GTCTC 1 cut(s) 190
BsmFI GGGAC 1 cut(s) 268
BsmI GAATGC 1 cut(s) 394
BsnI GGCC 3 cut(s) 86, 169, 191
Bso31I GGTCTC 1 cut(s) 190
Bsp143I GATC 3 cut(s) 49, 148, 396
Bsp68I TCGCGA 1 cut(s) 153
BspACI CCGC 5 cut(s) 165, 202, 206, 223, 441
BspANI GGCC 3 cut(s) 86, 169, 191
BspCNI CTCAG 1 cut(s) 337
BspFNI CGCG 2 cut(s) 153, 407
BspLI GGNNCC 1 cut(s) 22
BspPI GGATC 2 cut(s) 44, 391
BspTNI GGTCTC 1 cut(s) 190
BsrDI GCAATG 1 cut(s) 385
BsrI ACTGG 1 cut(s) 241
BssECI CCNNGG 1 cut(s) 170
BssMI GATC 3 cut(s) 49, 148, 396
Bst4CI ACNGT 1 cut(s) 353
BstC8I GCNNGC 5 cut(s) 167, 206, 328, 332, 439
BstDEI CTNAG 2 cut(s) 345, 458
BstDSI CCRYGG 1 cut(s) 170
BstEII GGTNACC 1 cut(s) 100
BstF5I GGATG 1 cut(s) 237
BstFNI CGCG 2 cut(s) 153, 407
BstHHI GCGC 1 cut(s) 409
BstKTI GATC 3 cut(s) 52, 151, 399
BstMAI GTCTC 1 cut(s) 190
BstMBI GATC 3 cut(s) 49, 148, 396
BstMCI CGRYCG 1 cut(s) 151
BstMWI GCNNNNNNNGC 3 cut(s) 29, 286, 415
BstPAI GACNNNNGTC 1 cut(s) 296
BstPI GGTNACC 1 cut(s) 100
BstSCI CCNGG 1 cut(s) 191
BstUI CGCG 2 cut(s) 153, 407
BstV1I GCAGC 2 cut(s) 19, 430
BsuRI GGCC 3 cut(s) 86, 169, 191
BtgI CCRYGG 1 cut(s) 170
BtsCI GGATG 1 cut(s) 237
BtsI GCAGTG 1 cut(s) 215
BtsIMutI CAGTG 2 cut(s) 215, 248
BtuMI TCGCGA 1 cut(s) 153
Cac8I GCNNGC 5 cut(s) 167, 206, 328, 332, 439
CfoI GCGC 1 cut(s) 409
Cfr13I GGNCC 3 cut(s) 85, 167, 190
Csp6I GTAC 2 cut(s) 73, 235
CviQI GTAC 2 cut(s) 73, 235
DdeI CTNAG 2 cut(s) 345, 458
DpnI GATC 3 cut(s) 51, 150, 398
DpnII GATC 3 cut(s) 49, 148, 396
Eco31I GGTCTC 1 cut(s) 190
Eco57I CTGAAG 1 cut(s) 360
Eco91I GGTNACC 1 cut(s) 100
EcoO65I GGTNACC 1 cut(s) 100
FaiI YATR 8 cut(s) 26, 315, 322, 425, 427, 429, 431, 435
FaqI GGGAC 1 cut(s) 268
FauI CCCGC 4 cut(s) 158, 209, 213, 434
FblI GTMKAC 1 cut(s) 180
Fnu4HI GCNGC 2 cut(s) 33, 419
FokI GGATG 1 cut(s) 224
Fsp4HI GCNGC 2 cut(s) 33, 419
GlaI GCGC 1 cut(s) 408
GluI GCNGC 2 cut(s) 33, 419
GsaI CCCAGC 2 cut(s) 165, 289
HaeIII GGCC 3 cut(s) 86, 169, 191
HapII CCGG 2 cut(s) 105, 193
HhaI GCGC 1 cut(s) 409
Hin6I GCGC 1 cut(s) 407
HinP1I GCGC 1 cut(s) 407
HinfI GANTC 4 cut(s) 108, 133, 229, 257
HpaII CCGG 2 cut(s) 105, 193
HphI GGTGA 1 cut(s) 94
Hpy166II GTNNAC 1 cut(s) 181
Hpy188I TCNGA 3 cut(s) 116, 256, 448
Hpy188III TCNNGA 2 cut(s) 53, 152
Hpy8I GTNNAC 1 cut(s) 181
Hpy99I CGWCG 1 cut(s) 116
HpyAV CCTTC 1 cut(s) 169
HpyCH4III ACNGT 1 cut(s) 353
HpyCH4V TGCA 4 cut(s) 35, 62, 418, 437
HpyF10VI GCNNNNNNNGC 3 cut(s) 29, 286, 415
HpyF3I CTNAG 2 cut(s) 345, 458
HspAI GCGC 1 cut(s) 407
Kzo9I GATC 3 cut(s) 49, 148, 396
LmnI GCTCC 2 cut(s) 20, 29
Lsp1109I GCAGC 2 cut(s) 19, 430
LweI GCATC 1 cut(s) 49
MaeIII GTNAC 3 cut(s) 100, 245, 298
MalI GATC 3 cut(s) 51, 150, 398
MboI GATC 3 cut(s) 49, 148, 396
MboII GAAGA 1 cut(s) 379
MluCI AATT 1 cut(s) 412
MlyI GAGTC 1 cut(s) 251
MmeI TCCRAC 2 cut(s) 94, 426
MnlI CCTC 4 cut(s) 134, 260, 265, 349
MslI CAYNNNNRTG 1 cut(s) 428
MspA1I CMGCKG 2 cut(s) 165, 289
MspI CCGG 2 cut(s) 105, 193
MspR9I CCNGG 1 cut(s) 193
Mva1269I GAATGC 1 cut(s) 394
MvnI CGCG 2 cut(s) 153, 407
MwoI GCNNNNNNNGC 3 cut(s) 29, 286, 415
NciI CCSGG 1 cut(s) 193
NdeII GATC 3 cut(s) 49, 148, 396
NlaIV GGNNCC 1 cut(s) 22
NmeAIII GCCGAG 1 cut(s) 154
NmuCI GTSAC 3 cut(s) 100, 245, 298
NruI TCGCGA 1 cut(s) 153
PctI GAATGC 1 cut(s) 394
PfeI GAWTC 3 cut(s) 108, 133, 229
PflMI CCANNNNNTGG 1 cut(s) 82
PkrI GCNGC 2 cut(s) 34, 420
Ple19I CGATCG 1 cut(s) 151
PleI GAGTC 1 cut(s) 251
PpsI GAGTC 1 cut(s) 251
PshAI GACNNNNGTC 1 cut(s) 296
PspEI GGTNACC 1 cut(s) 100
PspFI CCCAGC 2 cut(s) 161, 285
PspN4I GGNNCC 1 cut(s) 22
PspPI GGNCC 3 cut(s) 85, 167, 190
PvuI CGATCG 1 cut(s) 151
PvuII CAGCTG 1 cut(s) 289
RruI TCGCGA 1 cut(s) 153
RsaI GTAC 2 cut(s) 74, 236
RsaNI GTAC 2 cut(s) 73, 235
RseI CAYNNNNRTG 1 cut(s) 428
SatI GCNGC 2 cut(s) 33, 419
Sau3AI GATC 3 cut(s) 49, 148, 396
Sau96I GGNCC 3 cut(s) 85, 167, 190
SchI GAGTC 1 cut(s) 251
ScrFI CCNGG 1 cut(s) 193
SetI ASST 7 cut(s) 34, 180, 252, 282, 291, 346, 464
SfaNI GCATC 1 cut(s) 49
SmiMI CAYNNNNRTG 1 cut(s) 428
Sse9I AATT 1 cut(s) 412
SsiI CCGC 5 cut(s) 165, 202, 206, 223, 441
StyD4I CCNGG 1 cut(s) 191
TaaI ACNGT 1 cut(s) 353
TasI AATT 1 cut(s) 412
TatI WGTACW 1 cut(s) 234
TfiI GAWTC 3 cut(s) 108, 133, 229
TscAI CASTG 2 cut(s) 215, 248
TseFI GTSAC 3 cut(s) 100, 245, 298
TseI GCWGC 2 cut(s) 32, 418
Tsp45I GTSAC 3 cut(s) 100, 245, 298
TspRI CASTG 2 cut(s) 215, 248
Van91I CCANNNNNTGG 1 cut(s) 82
XapI RAATTY 1 cut(s) 412
XmiI GTMKAC 1 cut(s) 180
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.