Ulp1 protease family, C-terminal catalytic domain
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_1g26761 |
| rosa_multiflora | Rmu_sc0001168.1_g000004 Rmu_sc0001836.1_g000051 Rmu_sc0002798.1_g000008 |
| rosa_samantha | Rh1AG047900 Rh1CG052200 Rh1DG056400 Rh2AG333300 Rh4DG412300 Rh5AG276700 Rh6AG081600 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 1 cut(s) | 18 |
| AciI | CCGC | 1 cut(s) | 18 |
| AcsI | RAATTY | 2 cut(s) | 315, 323 |
| AfaI | GTAC | 1 cut(s) | 89 |
| AluBI | AGCT | 1 cut(s) | 46 |
| AluI | AGCT | 1 cut(s) | 46 |
| ApoI | RAATTY | 2 cut(s) | 315, 323 |
| BfaI | CTAG | 1 cut(s) | 38 |
| BglII | AGATCT | 1 cut(s) | 9 |
| BpuEI | CTTGAG | 1 cut(s) | 254 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 164, 194 |
| BseGI | GGATG | 1 cut(s) | 286 |
| BseRI | GAGGAG | 1 cut(s) | 56 |
| Bsh1236I | CGCG | 1 cut(s) | 18 |
| Bsp143I | GATC | 5 cut(s) | 9, 76, 201, 273, 285 |
| BspACI | CCGC | 1 cut(s) | 18 |
| BspFNI | CGCG | 1 cut(s) | 18 |
| BssMI | GATC | 5 cut(s) | 9, 76, 201, 273, 285 |
| BstF5I | GGATG | 1 cut(s) | 286 |
| BstFNI | CGCG | 1 cut(s) | 18 |
| BstKTI | GATC | 5 cut(s) | 12, 79, 204, 276, 288 |
| BstMBI | GATC | 5 cut(s) | 9, 76, 201, 273, 285 |
| BstUI | CGCG | 1 cut(s) | 18 |
| BstX2I | RGATCY | 1 cut(s) | 9 |
| BstYI | RGATCY | 1 cut(s) | 9 |
| BtsCI | GGATG | 1 cut(s) | 286 |
| BtsIMutI | CAGTG | 1 cut(s) | 93 |
| CseI | GACGC | 1 cut(s) | 231 |
| Csp6I | GTAC | 1 cut(s) | 88 |
| CviAII | CATG | 2 cut(s) | 177, 214 |
| CviJI | RGCY | 2 cut(s) | 46, 261 |
| CviKI_1 | RGCY | 2 cut(s) | 46, 261 |
| CviQI | GTAC | 1 cut(s) | 88 |
| DpnI | GATC | 5 cut(s) | 11, 78, 203, 275, 287 |
| DpnII | GATC | 5 cut(s) | 9, 76, 201, 273, 285 |
| FaeI | CATG | 2 cut(s) | 180, 217 |
| FaiI | YATR | 7 cut(s) | 35, 81, 101, 178, 183, 215, 321 |
| FatI | CATG | 2 cut(s) | 176, 213 |
| FokI | GGATG | 1 cut(s) | 293 |
| FspBI | CTAG | 1 cut(s) | 38 |
| HgaI | GACGC | 1 cut(s) | 231 |
| Hin1II | CATG | 2 cut(s) | 180, 217 |
| HinfI | GANTC | 1 cut(s) | 173 |
| HpyAV | CCTTC | 1 cut(s) | 109 |
| Hsp92II | CATG | 2 cut(s) | 180, 217 |
| Kzo9I | GATC | 5 cut(s) | 9, 76, 201, 273, 285 |
| LmnI | GCTCC | 1 cut(s) | 43 |
| MaeI | CTAG | 1 cut(s) | 38 |
| MalI | GATC | 5 cut(s) | 11, 78, 203, 275, 287 |
| MboI | GATC | 5 cut(s) | 9, 76, 201, 273, 285 |
| MboII | GAAGA | 1 cut(s) | 64 |
| MfeI | CAATTG | 1 cut(s) | 26 |
| MflI | RGATCY | 1 cut(s) | 9 |
| MluCI | AATT | 5 cut(s) | 26, 102, 249, 315, 323 |
| MlyI | GAGTC | 1 cut(s) | 182 |
| MnlI | CCTC | 4 cut(s) | 14, 34, 56, 117 |
| MseI | TTAA | 2 cut(s) | 162, 257 |
| MunI | CAATTG | 1 cut(s) | 26 |
| MvnI | CGCG | 1 cut(s) | 18 |
| NdeII | GATC | 5 cut(s) | 9, 76, 201, 273, 285 |
| NlaIII | CATG | 2 cut(s) | 180, 217 |
| PleI | GAGTC | 1 cut(s) | 181 |
| PpsI | GAGTC | 1 cut(s) | 181 |
| PsuI | RGATCY | 1 cut(s) | 9 |
| RsaI | GTAC | 1 cut(s) | 89 |
| RsaNI | GTAC | 1 cut(s) | 88 |
| SaqAI | TTAA | 2 cut(s) | 162, 257 |
| Sau3AI | GATC | 5 cut(s) | 9, 76, 201, 273, 285 |
| SchI | GAGTC | 1 cut(s) | 182 |
| SetI | ASST | 2 cut(s) | 48, 120 |
| SgeI | CNNG | 8 cut(s) | 27, 29, 50, 122, 189, 226, 245, 289 |
| SmlI | CTYRAG | 1 cut(s) | 233 |
| SmoI | CTYRAG | 1 cut(s) | 233 |
| Sse9I | AATT | 5 cut(s) | 26, 102, 249, 315, 323 |
| SsiI | CCGC | 1 cut(s) | 18 |
| SspI | AATATT | 1 cut(s) | 136 |
| SspMI | CTAG | 1 cut(s) | 38 |
| TaqI | TCGA | 2 cut(s) | 75, 229 |
| TaqII | GACCGA | 1 cut(s) | 233 |
| TasI | AATT | 5 cut(s) | 26, 102, 249, 315, 323 |
| TatI | WGTACW | 1 cut(s) | 87 |
| Tru1I | TTAA | 2 cut(s) | 162, 257 |
| Tru9I | TTAA | 2 cut(s) | 162, 257 |
| TscAI | CASTG | 1 cut(s) | 100 |
| TspDTI | ATGAA | 1 cut(s) | 17 |
| TspRI | CASTG | 1 cut(s) | 100 |
| XapI | RAATTY | 2 cut(s) | 315, 323 |
| XspI | CTAG | 1 cut(s) | 38 |