Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6A

Orthogroup ID

OG0007704

Physical Location & Seq

Genomic Coordinates Forward (+)

41154037 .. 41166978

Gene Structure 12942 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6AG228200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2001 bp

ATGATTTTGTTTTCATTAGTTTTTGTATGTCTCTTTGTTGAACAGGTATGTGCAGCATTTGTTCAGCTGATTGAAGTTCGTCCAGGGTTCTTGGAGCCACAGTTGAGGAACTTAATTGAATACATGTTGCAAGTCAACAAGGACACCGATGAAGAAGTTGCCCTTGAAGCCTGTGAATTCTGGTCTGCATATTGTGAGGCTGAGTTACCACCTGAGATCTTAAGAGAGTTTTTACCCCGTCTAATTCCGATTTTGCTGTCAAACATGGCTTACGCTGAGGATGATGAGTCCCTTGTTGATGCTGAGGAGGATGGCTCTGTCCCAGACCGTGATCAGGATATCAAACCTCGTTTTCATTCATCGCGGTTTCATGGATCTGATGGTGCGGAAGAAGATGATGATGATATTGTCAATGTTTGGAATTTACGGAAATGCAGTGCAGCGGCCGTTGATATCCTGTCAACTGTGTTTGGGGATGAGATTCTCCCAACACTGATGGCCTTTGTTCAGGCCAAGTTGTCCAACAGTGATGATGAAACATGGAAAGAAAGGGAAGCTGCTGTTTTGGCTCTAGGGGCGGTAGCTGAAGGTTGCATTATTGGTCTTTATCCTCATTTGAATGAGATCATTGCATATCTTATTCCTCTCTTAGACGATAAGTTTCCACTTATAAGGAGCATATCCTGTTGGACACTTTCACGTTTCAGCAAGTTCATTGTTGAGGGTGTTGGACATCAACAAGGTTATGAGCAGTTTGACAAGGTTCTTCTGGGTCTCTTAAGAAGAATATTAGATAATAACAAGCGGGTACAGGAGGCTGCTTGCTCAGCTTTTGCGACACTTGAAGAGGAGGCGGCTGATGCGTTGGCACCACGCCTGGAAACTATTTTACAACACCTTATGTGCGCTTTTGGGAAATATCAGAGACGGAACCTTAGAATTGTATATGATGCCATTGGAACTCTAGCAGATGCTGTCGGTGGGGAGTTGAATCGTCCCAATTATCTTGAAATTCTCATGCCACCATTAATTGCAAAGTGGCAACAACTTGCAAATTCAGATAAAGATCTGTTTCCATTGCTGGAGTGCTTTACTTCTATTTCGCAGGCATTGGGTGCCGGATTCTCTCCATTTGCAGAGCCAGTGTTTCAGAGGTGCATAAGCATCATACAGTCCCAACAAGTTGCCAAGGTTGATCCGGTCGCTTCAGGAGTCCAGTATGATAAAGAATTTATTGTGTGCTCTCTTGACTTGCTTTCTGGACTTACAGAAGGTCTTGGTAGTGGGATAGAAAGTTTGGTTTCACAAAGCAATTTGAAGGACCTGCTTTTGCACTGTTGCATGGATGATGCTTCGGATGTCCGACAGAGTGGCTTTGCCTTACTTGGGGATCTTGCAAGAGTATGCCCTGTTCATTTGCGTCCTCGTTTGCCGGAATTTCTTGATGTTGCAGCCAAACAACTGAATACTCCTAAGCTGAAGGAAACTGTTTCAGTGGCAAATAATGCGTGTTGGGCCATTGGTGAGTTAGCAGTCAAGGTTCATCAAGAAATTTCTCCAATTGTTTTGACGGTCATGTCTTGCTTAGTCCCCATACTGCAGCATCCAGAGGCGCTCAACAAGTCACTGATTGAGAACAGTGCTATCACGCTTGGGAGGCTTGCATATGTTTGTCCAGAGCTTGTGGCTCCGCATATGGAGCATTTCATGCAGCCATGGTGCATTGCTTTGTCAATGATACGTGATGATATAGAAAAGGAGGATGCATTCCGAGGTCTATGCGCATTGGTTAGAACAAATCCATCCGGAGCATTGAGTTCACTCATATATATGTGCAATGCTATTGCCAGTTGGCATGAAATAAGGAGTGAAGAGCTACATAATGCAGTTTGCCAGGTGTTGCACGGTTATAAGCAGATGCTTGTGAATGGAGCGTGGGAACAGTGTATGTCTGCTTTGGAGCCACAAGTCAAGAACAAGCTATCAAAATACCAAGTGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000060 GO:0003674 GO:0005048 GO:0005215 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005635 GO:0005737 GO:0006606 GO:0006607 GO:0006610 GO:0006810 GO:0006886 GO:0006913 GO:0008104 GO:0008139 GO:0008150 GO:0008565 GO:0012505 GO:0015031 GO:0015833 GO:0016020 GO:0017038 GO:0031090 GO:0031965 GO:0031967 GO:0031974 GO:0031975 GO:0031981 GO:0033036 GO:0033218 GO:0033365 GO:0034399 GO:0034504 GO:0034613 GO:0042277 GO:0042886 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0045184 GO:0046907 GO:0051169 GO:0051170 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0070013 GO:0070727 GO:0071702 GO:0071705 GO:0072594

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

HEAT HEAT_EZ IBN_N Ribosomal_S17

Protein Analysis

666

Amino Acids

74.14

Weight (kDa)

4.74

Isoelectric Point (pI)

51.8

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
HEAT_EZ	PF13513	181 - 235	1.7e-14	HEAT-like repeat
TPR_IMB1	PF25574	255 - 470	9.8e-09	Importin subunit beta-1-like, TPR repeats

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007704)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G16950 AT2G16950
fragaria_vesca	FvH4_2g15650 FvH4_2g15650 FvH4_2g15650 FvH4_2g15650 FvH4_2g15650 FvH4_2g15650
malus_domestica	MD05G1125000.v1.1 MD10G1127800.v1.1
prunus_persica	Prupe.8G169000_v2.0.a1 Prupe.8G169000_v2.0.a1 Prupe.8G169000_v2.0.a1
pyrus_communis	pycom05g11910 pycom10g10950
rosa_chinensis	RchiOBHm_Chr6g0278851
rosa_laevigata	RLG00000013189
rosa_multiflora	Rmu_sc0004380.1_g000009 Rmu_sc0024310.1_g000003
rosa_roxburghii	Rroxscaffold_7G00189590
rosa_rugosa	Rorug06G0119700
rosa_samantha	Rh6AG228200 Rh6BG233800
rosa_wichuraiana	Rw6G020020

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	671, 1911
AasI	GACNNNNNNGTC	1 cut(s)	1576
Acc16I	TGCGCA	1 cut(s)	1783
Acc36I	ACCTGC	1 cut(s)	1332
AccB1I	GGYRCC	2 cut(s)	868, 1115
AccII	CGCG	1 cut(s)	364
AccIII	TCCGGA	1 cut(s)	1805
AciI	CCGC	7 cut(s)	364, 386, 443, 578, 805, 854, 1691
AclWI	GGATC	3 cut(s)	382, 1190, 1398
AcoI	YGGCCR	1 cut(s)	444
AcsI	RAATTY	7 cut(s)	176, 421, 1011, 1054, 1229, 1436, 1551
AcuI	CTGAAG	3 cut(s)	606, 1191, 1499
AfaI	GTAC	1 cut(s)	810
AfiI	CCNNNNNNNGG	2 cut(s)	334, 1386
AflII	CTTAAG	2 cut(s)	220, 778
AflIII	ACRYGT	1 cut(s)	123
AgsI	TTSAA	9 cut(s)	41, 74, 119, 167, 619, 845, 991, 1010, 1318
AjnI	CCWGG	3 cut(s)	82, 876, 1893
AluBI	AGCT	8 cut(s)	67, 557, 584, 830, 1477, 1681, 1876, 1981
AluI	AGCT	8 cut(s)	67, 557, 584, 830, 1477, 1681, 1876, 1981
Alw21I	GWGCWC	1 cut(s)	1244
Alw26I	GTCTC	3 cut(s)	35, 779, 919
AlwI	GGATC	3 cut(s)	382, 1190, 1398
AlwNI	CAGNNNCTG	1 cut(s)	974
Aor13HI	TCCGGA	1 cut(s)	1805
AoxI	GGCC	4 cut(s)	444, 498, 510, 1515
ApeKI	GCWGC	7 cut(s)	53, 440, 557, 818, 1451, 1600, 1711
ApoI	RAATTY	7 cut(s)	176, 421, 1011, 1054, 1229, 1436, 1551
AseI	ATTAAT	1 cut(s)	1028
AspLEI	GCGC	3 cut(s)	908, 1615, 1784
AspS9I	GGNCC	2 cut(s)	1321, 1515
AsuHPI	GGTGA	1 cut(s)	1535
AvaII	GGWCC	1 cut(s)	1321
BanI	GGYRCC	2 cut(s)	868, 1115
Bbv12I	GWGCWC	1 cut(s)	1244
BbvCI	CCTCAGC	2 cut(s)	276, 303
BbvI	GCAGC	7 cut(s)	65, 452, 544, 805, 1463, 1612, 1723
BccI	CCATC	4 cut(s)	305, 374, 490, 1810
BceAI	ACGGC	1 cut(s)	431
BcgI	CGANNNNNNTGC	2 cut(s)	1761, 1795
BciT130I	CCWGG	3 cut(s)	84, 878, 1895
BclI	TGATCA	1 cut(s)	331
BcoDI	GTCTC	3 cut(s)	35, 779, 919
BfaI	CTAG	2 cut(s)	572, 965
BfmI	CTRYAG	1 cut(s)	1598
BfoI	RGCGCY	1 cut(s)	1616
BfrI	CTTAAG	2 cut(s)	220, 778
BfuAI	ACCTGC	1 cut(s)	1332
BglII	AGATCT	2 cut(s)	216, 1066
BisI	GCNGC	9 cut(s)	54, 441, 444, 558, 819, 855, 1452, 1601, 1712
BlpI	GCTNAGC	1 cut(s)	826
BlsI	GCNGC	9 cut(s)	55, 442, 445, 559, 820, 856, 1453, 1602, 1713
Bme1390I	CCNGG	3 cut(s)	84, 878, 1895
Bme18I	GGWCC	1 cut(s)	1321
BmgT120I	GGNCC	2 cut(s)	1321, 1515
BmiI	GGNNCC	6 cut(s)	96, 870, 932, 1117, 1689, 1962
BmrFI	CCNGG	3 cut(s)	84, 878, 1895
BmsI	GCATC	9 cut(s)	289, 850, 940, 961, 1173, 1339, 1612, 1753, 1908
BplI	GAGNNNNNCTC	2 cut(s)	299, 331
BpmI	CTGGAG	1 cut(s)	1103
Bpu10I	CCTNAGC	3 cut(s)	276, 303, 1473
Bpu1102I	GCTNAGC	1 cut(s)	826
BsaAI	YACGTR	1 cut(s)	1742
BsaBI	GATNNNNATC	1 cut(s)	1065
BsaI	GGTCTC	1 cut(s)	779
BsaJI	CCNNGG	4 cut(s)	83, 1188, 1715, 1771
BsaWI	WCCGGW	2 cut(s)	1198, 1805
BsaXI	ACNNNNNCTCC	2 cut(s)	86, 116
Bsc4I	CCNNNNNNNGG	2 cut(s)	334, 1386
Bse1I	ACTGG	3 cut(s)	1142, 1216, 1848
Bse3DI	GCAATG	4 cut(s)	627, 1076, 1722, 1843
Bse8I	GATNNNNATC	1 cut(s)	1065
BseAI	TCCGGA	1 cut(s)	1805
BseBI	CCWGG	3 cut(s)	84, 878, 1895
BseDI	CCNNGG	4 cut(s)	83, 1188, 1715, 1771
BseGI	GGATG	8 cut(s)	286, 316, 481, 1351, 1363, 1603, 1768, 1802
BseJI	GATNNNNATC	1 cut(s)	1065
BseLI	CCNNNNNNNGG	2 cut(s)	334, 1386
BseMI	GCAATG	4 cut(s)	627, 1076, 1722, 1843
BseMII	CTCAG	5 cut(s)	192, 204, 267, 294, 840
BseNI	ACTGG	3 cut(s)	1142, 1216, 1848
BseRI	GAGGAG	2 cut(s)	320, 863
BseX3I	CGGCCG	1 cut(s)	444
BseXI	GCAGC	7 cut(s)	65, 452, 544, 805, 1463, 1612, 1723
BsgI	GTGCAG	2 cut(s)	72, 459
Bsh1236I	CGCG	1 cut(s)	364
Bsh1285I	CGRYCG	2 cut(s)	447, 1203
BshFI	GGCC	4 cut(s)	446, 500, 512, 1517
BshNI	GGYRCC	2 cut(s)	868, 1115
BsiEI	CGRYCG	2 cut(s)	447, 1203
BsiHKAI	GWGCWC	1 cut(s)	1244
BsiSI	CCGG	4 cut(s)	1119, 1199, 1433, 1806
BslFI	GGGAC	5 cut(s)	274, 305, 981, 1159, 1574
BslI	CCNNNNNNNGG	2 cut(s)	334, 1386
BsmAI	GTCTC	3 cut(s)	35, 779, 919
BsmBI	CGTCTC	1 cut(s)	919
BsmFI	GGGAC	5 cut(s)	274, 305, 981, 1159, 1574
BsmI	GAATGC	1 cut(s)	1766
BsnI	GGCC	4 cut(s)	446, 500, 512, 1517
Bso31I	GGTCTC	1 cut(s)	779
Bsp1286I	GDGCHC	1 cut(s)	1244
Bsp13I	TCCGGA	1 cut(s)	1805
Bsp143I	GATC	7 cut(s)	216, 331, 374, 624, 1066, 1195, 1390
Bsp1720I	GCTNAGC	1 cut(s)	826
Bsp19I	CCATGG	1 cut(s)	1715
BspACI	CCGC	7 cut(s)	364, 386, 443, 578, 805, 854, 1691
BspANI	GGCC	4 cut(s)	446, 500, 512, 1517
BspCNI	CTCAG	5 cut(s)	193, 205, 268, 295, 839
BspEI	TCCGGA	1 cut(s)	1805
BspFNI	CGCG	1 cut(s)	364
BspLI	GGNNCC	6 cut(s)	96, 870, 932, 1117, 1689, 1962
BspMAI	CTGCAG	1 cut(s)	1602
BspMI	ACCTGC	1 cut(s)	1332
BspPI	GGATC	3 cut(s)	382, 1190, 1398
BspQI	GCTCTTC	1 cut(s)	1866
BspT107I	GGYRCC	2 cut(s)	868, 1115
BspTI	CTTAAG	2 cut(s)	220, 778
BspTNI	GGTCTC	1 cut(s)	779
BsrDI	GCAATG	4 cut(s)	627, 1076, 1722, 1843
BsrI	ACTGG	3 cut(s)	1142, 1216, 1848
BssECI	CCNNGG	4 cut(s)	83, 1188, 1715, 1771
BssMI	GATC	7 cut(s)	216, 331, 374, 624, 1066, 1195, 1390
BssT1I	CCWWGG	2 cut(s)	1188, 1715
Bst2UI	CCWGG	3 cut(s)	84, 878, 1895
Bst6I	CTCTTC	2 cut(s)	840, 1866
BstAFI	CTTAAG	2 cut(s)	220, 778
BstAPI	GCANNNNNTGC	3 cut(s)	1115, 1505, 1708
BstBAI	YACGTR	1 cut(s)	1742
BstC8I	GCNNGC	3 cut(s)	823, 1107, 1662
BstDEI	CTNAG	9 cut(s)	201, 213, 276, 303, 649, 826, 935, 1473, 1585
BstDSI	CCRYGG	1 cut(s)	1715
BstF5I	GGATG	8 cut(s)	286, 316, 481, 1351, 1363, 1603, 1768, 1802
BstFNI	CGCG	1 cut(s)	364
BstH2I	RGCGCY	1 cut(s)	1616
BstHHI	GCGC	3 cut(s)	908, 1615, 1784
BstKTI	GATC	7 cut(s)	219, 334, 377, 627, 1069, 1198, 1393
BstMAI	GTCTC	3 cut(s)	35, 779, 919
BstMBI	GATC	7 cut(s)	216, 331, 374, 624, 1066, 1195, 1390
BstMCI	CGRYCG	2 cut(s)	447, 1203
BstNI	CCWGG	3 cut(s)	84, 878, 1895
BstNSI	RCATGY	1 cut(s)	127
BstSCI	CCNGG	3 cut(s)	82, 876, 1893
BstSFI	CTRYAG	1 cut(s)	1598
BstUI	CGCG	1 cut(s)	364
BstV1I	GCAGC	7 cut(s)	65, 452, 544, 805, 1463, 1612, 1723
BstX2I	RGATCY	4 cut(s)	216, 374, 1066, 1390
BstYI	RGATCY	4 cut(s)	216, 374, 1066, 1390
BstZI	CGGCCG	1 cut(s)	444
BsuRI	GGCC	4 cut(s)	446, 500, 512, 1517
BtgI	CCRYGG	1 cut(s)	1715
BtgZI	GCGATG	1 cut(s)	345
BtsCI	GGATG	8 cut(s)	286, 316, 481, 1351, 1363, 1603, 1768, 1802
BtsI	GCAGTG	1 cut(s)	442
BtsIMutI	CAGTG	9 cut(s)	442, 491, 532, 1149, 1333, 1500, 1625, 1645, 1949
BveI	ACCTGC	1 cut(s)	1332
Cac8I	GCNNGC	3 cut(s)	823, 1107, 1662
CaiI	CAGNNNCTG	1 cut(s)	974
CfoI	GCGC	3 cut(s)	908, 1615, 1784
Cfr13I	GGNCC	2 cut(s)	1321, 1515
CseI	GACGC	1 cut(s)	1409
Csp6I	GTAC	1 cut(s)	809
CviQI	GTAC	1 cut(s)	809
DdeI	CTNAG	9 cut(s)	201, 213, 276, 303, 649, 826, 935, 1473, 1585
DpnI	GATC	7 cut(s)	218, 333, 376, 626, 1068, 1197, 1392
DpnII	GATC	7 cut(s)	216, 331, 374, 624, 1066, 1195, 1390
DrdI	GACNNNNNNGTC	1 cut(s)	1576
DseDI	GACNNNNNNGTC	1 cut(s)	1576
EaeI	YGGCCR	1 cut(s)	444
EagI	CGGCCG	1 cut(s)	444
Eam1104I	CTCTTC	2 cut(s)	840, 1866
EarI	CTCTTC	2 cut(s)	840, 1866
EclXI	CGGCCG	1 cut(s)	444
Eco130I	CCWWGG	2 cut(s)	1188, 1715
Eco31I	GGTCTC	1 cut(s)	779
Eco32I	GATATC	2 cut(s)	340, 454
Eco47I	GGWCC	1 cut(s)	1321
Eco52I	CGGCCG	1 cut(s)	444
Eco57I	CTGAAG	3 cut(s)	606, 1191, 1499
EcoO109I	RGGNCCY	1 cut(s)	1321
EcoRI	GAATTC	1 cut(s)	176
EcoRII	CCWGG	3 cut(s)	82, 876, 1893
EcoRV	GATATC	2 cut(s)	340, 454
EcoT14I	CCWWGG	2 cut(s)	1188, 1715
EcoT22I	ATGCAT	1 cut(s)	1768
ErhI	CCWWGG	2 cut(s)	1188, 1715
Esp3I	CGTCTC	1 cut(s)	919
FalI	AAGNNNNNCTT	2 cut(s)	147, 179
FaqI	GGGAC	5 cut(s)	274, 305, 981, 1159, 1574
FauI	CCCGC	1 cut(s)	798
FauNDI	CATATG	2 cut(s)	1666, 1695
FbaI	TGATCA	1 cut(s)	331
Fnu4HI	GCNGC	9 cut(s)	54, 441, 444, 558, 819, 855, 1452, 1601, 1712
FokI	GGATG	8 cut(s)	293, 323, 488, 1358, 1370, 1590, 1775, 1789
Fsp4HI	GCNGC	9 cut(s)	54, 441, 444, 558, 819, 855, 1452, 1601, 1712
FspAI	RTGCGCAY	1 cut(s)	1783
FspBI	CTAG	2 cut(s)	572, 965
FspI	TGCGCA	1 cut(s)	1783
GlaI	GCGC	3 cut(s)	907, 1614, 1783
GluI	GCNGC	9 cut(s)	54, 441, 444, 558, 819, 855, 1452, 1601, 1712
GsuI	CTGGAG	1 cut(s)	1103
HaeII	RGCGCY	1 cut(s)	1616
HaeIII	GGCC	4 cut(s)	446, 500, 512, 1517
HapII	CCGG	4 cut(s)	1119, 1199, 1433, 1806
HgaI	GACGC	1 cut(s)	1409
HhaI	GCGC	3 cut(s)	908, 1615, 1784
Hin6I	GCGC	3 cut(s)	906, 1613, 1782
HinP1I	GCGC	3 cut(s)	906, 1613, 1782
HincII	GTYRAC	2 cut(s)	136, 462
HindII	GTYRAC	2 cut(s)	136, 462
HinfI	GANTC	5 cut(s)	287, 481, 991, 1122, 1212
HpaII	CCGG	4 cut(s)	1119, 1199, 1433, 1806
HphI	GGTGA	1 cut(s)	1535
Hpy166II	GTNNAC	3 cut(s)	136, 462, 1820
Hpy188I	TCNGA	8 cut(s)	249, 379, 924, 1060, 1152, 1357, 1364, 1772
Hpy8I	GTNNAC	3 cut(s)	136, 462, 1820
HpyAV	CCTTC	4 cut(s)	581, 1265, 1312, 1474
HpyCH4IV	ACGT	2 cut(s)	700, 1741
HpyF3I	CTNAG	9 cut(s)	201, 213, 276, 303, 649, 826, 935, 1473, 1585
HpySE526I	ACGT	2 cut(s)	700, 1741
HspAI	GCGC	3 cut(s)	906, 1613, 1782
Kpn2I	TCCGGA	1 cut(s)	1805
Ksp22I	TGATCA	1 cut(s)	331
Kzo9I	GATC	7 cut(s)	216, 331, 374, 624, 1066, 1195, 1390
LguI	GCTCTTC	1 cut(s)	1866
LmnI	GCTCC	7 cut(s)	94, 675, 1693, 1699, 1808, 1931, 1960
Lsp1109I	GCAGC	7 cut(s)	65, 452, 544, 805, 1463, 1612, 1723
LweI	GCATC	9 cut(s)	289, 850, 940, 961, 1173, 1339, 1612, 1753, 1908
MaeI	CTAG	2 cut(s)	572, 965
MaeII	ACGT	2 cut(s)	700, 1741
MaeIII	GTNAC	2 cut(s)	204, 1623
MalI	GATC	7 cut(s)	218, 333, 376, 626, 1068, 1197, 1392
MboI	GATC	7 cut(s)	216, 331, 374, 624, 1066, 1195, 1390
MboII	GAAGA	7 cut(s)	164, 401, 404, 758, 795, 857, 1883
MfeI	CAATTG	1 cut(s)	1560
MflI	RGATCY	4 cut(s)	216, 374, 1066, 1390
MhlI	GDGCHC	1 cut(s)	1244
MlyI	GAGTC	2 cut(s)	296, 1221
MmeI	TCCRAC	4 cut(s)	546, 668, 709, 1387
Mph1103I	ATGCAT	1 cut(s)	1768
MroI	TCCGGA	1 cut(s)	1805
MseI	TTAA	4 cut(s)	113, 221, 779, 1028
MslI	CAYNNNNRTG	2 cut(s)	618, 1829
MspA1I	CMGCKG	2 cut(s)	67, 443
MspCI	CTTAAG	2 cut(s)	220, 778
MspI	CCGG	4 cut(s)	1119, 1199, 1433, 1806
MspR9I	CCNGG	3 cut(s)	84, 878, 1895
MunI	CAATTG	1 cut(s)	1560
Mva1269I	GAATGC	1 cut(s)	1766
MvaI	CCWGG	3 cut(s)	84, 878, 1895
MvnI	CGCG	1 cut(s)	364
NcoI	CCATGG	1 cut(s)	1715
NdeI	CATATG	2 cut(s)	1666, 1695
NdeII	GATC	7 cut(s)	216, 331, 374, 624, 1066, 1195, 1390
NlaIV	GGNNCC	6 cut(s)	96, 870, 932, 1117, 1689, 1962
NmuCI	GTSAC	1 cut(s)	1623
NsbI	TGCGCA	1 cut(s)	1783
NsiI	ATGCAT	1 cut(s)	1768
NspI	RCATGY	1 cut(s)	127
PciI	ACATGT	1 cut(s)	123
PciSI	GCTCTTC	1 cut(s)	1866
PctI	GAATGC	1 cut(s)	1766
PfeI	GAWTC	3 cut(s)	481, 991, 1122
PkrI	GCNGC	9 cut(s)	55, 442, 445, 559, 820, 856, 1453, 1602, 1713
PleI	GAGTC	2 cut(s)	295, 1220
PpsI	GAGTC	2 cut(s)	295, 1220
Ppu21I	YACGTR	1 cut(s)	1742
PpuMI	RGGWCCY	1 cut(s)	1321
PscI	ACATGT	1 cut(s)	123
PshBI	ATTAAT	1 cut(s)	1028
PsiI	TTATAA	2 cut(s)	671, 1911
Psp5II	RGGWCCY	1 cut(s)	1321
Psp6I	CCWGG	3 cut(s)	82, 876, 1893
PspGI	CCWGG	3 cut(s)	82, 876, 1893
PspN4I	GGNNCC	6 cut(s)	96, 870, 932, 1117, 1689, 1962
PspPI	GGNCC	2 cut(s)	1321, 1515
PspPPI	RGGWCCY	1 cut(s)	1321
PsrI	GAACNNNNNNTAC	2 cut(s)	1395, 1427
PstI	CTGCAG	1 cut(s)	1602
PstNI	CAGNNNCTG	1 cut(s)	974
PsuI	RGATCY	4 cut(s)	216, 374, 1066, 1390
PvuII	CAGCTG	1 cut(s)	67
RsaI	GTAC	1 cut(s)	810
RsaNI	GTAC	1 cut(s)	809
RseI	CAYNNNNRTG	2 cut(s)	618, 1829
SapI	GCTCTTC	1 cut(s)	1866
SaqAI	TTAA	4 cut(s)	113, 221, 779, 1028
SatI	GCNGC	9 cut(s)	54, 441, 444, 558, 819, 855, 1452, 1601, 1712
Sau3AI	GATC	7 cut(s)	216, 331, 374, 624, 1066, 1195, 1390
Sau96I	GGNCC	2 cut(s)	1321, 1515
SchI	GAGTC	2 cut(s)	296, 1221
ScrFI	CCNGG	3 cut(s)	84, 878, 1895
SduI	GDGCHC	1 cut(s)	1244
SfaNI	GCATC	9 cut(s)	289, 850, 940, 961, 1173, 1339, 1612, 1753, 1908
SfcI	CTRYAG	1 cut(s)	1598
SinI	GGWCC	1 cut(s)	1321
SmiMI	CAYNNNNRTG	2 cut(s)	618, 1829
SmlI	CTYRAG	2 cut(s)	220, 778
SmoI	CTYRAG	2 cut(s)	220, 778
SsiI	CCGC	7 cut(s)	364, 386, 443, 578, 805, 854, 1691
SspI	AATATT	1 cut(s)	789
SspMI	CTAG	2 cut(s)	572, 965
StyD4I	CCNGG	3 cut(s)	82, 876, 1893
StyI	CCWWGG	2 cut(s)	1188, 1715
TaiI	ACGT	2 cut(s)	703, 1744
TauI	GCSGC	2 cut(s)	446, 857
TfiI	GAWTC	3 cut(s)	481, 991, 1122
Tru1I	TTAA	4 cut(s)	113, 221, 779, 1028
Tru9I	TTAA	4 cut(s)	113, 221, 779, 1028
TscAI	CASTG	9 cut(s)	442, 498, 532, 1149, 1340, 1500, 1632, 1645, 1949
TseFI	GTSAC	1 cut(s)	1623
TseI	GCWGC	7 cut(s)	53, 440, 557, 818, 1451, 1600, 1711
Tsp45I	GTSAC	1 cut(s)	1623
TspGWI	ACGGA	2 cut(s)	442, 943
TspRI	CASTG	9 cut(s)	442, 498, 532, 1149, 1340, 1500, 1632, 1645, 1949
Vha464I	CTTAAG	2 cut(s)	220, 778
VpaK11BI	GGWCC	1 cut(s)	1321
VspI	ATTAAT	1 cut(s)	1028
XapI	RAATTY	7 cut(s)	176, 421, 1011, 1054, 1229, 1436, 1551
XceI	RCATGY	1 cut(s)	127
XspI	CTAG	2 cut(s)	572, 965
Zsp2I	ATGCAT	1 cut(s)	1768

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.