Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6A

Orthogroup ID

OG0007203

Physical Location & Seq

Genomic Coordinates Forward (+)

58829254 .. 58835215

Gene Structure 5962 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6AG389500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1569 bp

ATGAGAAAAGCTTCGGCAATCTCAGCGATCCTATTTGGGCTCGTTCGCGGCCCAAAATCCAATTCCAGCTTCAATGCAATTCGCTGTTACTGTGATCGAACAGTTTCCAAATCCAGAAAGCTTCCAGGGCCATTAACGCAGTACAAGAGGTTGGTTGAGCAAGGGAAGCTGCAACATGATCCGAACCAAGAAGCGGTGGCTTCGCAATTGGAGAACTTGCTGGGGAGGTTAGAGCAGTATGAGAGAGATATGGAGGAATATCATACAAGCCTGGCGAATTGGGAGAAGAAGAGAGAGAATGAGCGGCGGAGGATTTTAATGGAGGAAGCTGAGAGTAAGCAGAAGGATGACATGTGGACGTCAGTGAACAACCAAGGGAATAAGCTTTTCCGGAGATGGATGTCCAAGAAAAGACCTGAGAATGTAGAACCTGGAGTTGGGAAATGGGTTTCGTACTTAAATAGAGAAAGGAAGTTGGATTCAATTGTTGGACGTCGTCCAATTGCTCCTGCAGCTCCGAAAGGACTGTATATTTATGGCAATGTTGGAAGTGGAAAGACGATGCTTATGGACATGTTCTATAGTGCCACTGAAGGAATAGTTAAGCATCGAAAGAGATATCACTTTCATGAGGCTATGTTGAAAATTAATGAACAAATGCATCAGATTTGGAAAAATCAAGTGGCTGATAAGTCTTTGCAGTCCAGCATTGCTAATTGGATAATGAGTCTACCCTTCGATTCGAAGGTCAAGGAGTGGGTGGCTGCAGAAGAGAACTACAAACAACAGGTTCAGATGAAAAACATCCTTCCAGCTGTGGCAGATAAGCTTCTCCTAGATCGACAGGCAGATCAAAAGGGTGGCAGCATTCTTTGTTTTGATGAGATACAGACTGTTGATGTATTTGCTATTGTGGCCTTATCTGGAATTGTTAGCAGATTGTTAAGTACTGGAACTGTTTTTGTGGCCACCAGTAACCGAGCACCAACGGACTTAAATCAGGATGGTATGCAGAAGGAGATCTTCCAAAAGTTTGTTGCCAAATTGAATCAGCACTGTGAGAATGTTCTGATTGGAAGTGAGATAGATTATCGCCGTGTTATAGCTCAAAATCAAAGATCTAAGGACCAGGTAGGTGCAGCAGATTATATTGCAGTAGCAGAAAATTATCATACTGTCTTCATATCTGGCATTCCAGTGATGAGTATGCGTATCCGTGATAAGGCACGGAGGTTTATTACCCTTGTTGATGAATTATACAATCATCATTGCCGGCTATTTTGTTCTGCAGCTTCTTCTATTGATGATTTGTTTCAAGGAACTGAAGAGGGTGCACTTTTTGATCTAGAGAGTTTCCAGTTTGAAACAGAGACAGAAGGAGCAAAGCTTCGCCGCGATGTTTTAGCAGAAGGGAATGTGAGTTCAGGAGGTGCCCCAACTGGTATAGTATCCATGCTATCTGGTCAAGAAGAAATGTTTGCTTTCCGCCGAGCAGTTTCACGACTGATTGAAATGCAGACACCTAAAACTTACAGCCTCAGTTGTCTTTCTAAGAAACAAAATATGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AFG1_ATPase

Protein Analysis

522

Amino Acids

59.45

Weight (kDa)

9.12

Isoelectric Point (pI)

43.84

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AFG1_ATPase	PF03969	158 - 368	4.8e-31	AFG1-like ATPase
AFG1_ATPase	PF03969	376 - 442	3.3e-16	AFG1-like ATPase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007203)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G25530 AT2G25530
fragaria_vesca	FvH4_2g29360
malus_domestica	MD08G1148100.v1.1
prunus_persica	Prupe.1G479100_v2.0.a1 Prupe.1G479100_v2.0.a1 Prupe.1G479100_v2.0.a1 Prupe.1G479100_v2.0.a1 Prupe.1G479100_v2.0.a1
pyrus_communis	pycom08g12470
rosa_chinensis	RchiOBHm_Chr6g0298181
rosa_laevigata	RLG00000011528
rosa_multiflora	Rmu_co8301461.1_g000001 Rmu_sc0007429.1_g000003 Rmu_sc0010099.1_g000014 Rmu_sc0022064.1_g000002
rosa_roxburghii	Rroxscaffold_7G00169890
rosa_rugosa	Rorug06G0279200 Rorug06G0279300 Rorug06G0279400
rosa_samantha	Rh6AG389500 Rh6BG397900 Rh6CG403700 Rh6DG390400
rosa_wichuraiana	Rw6G034010

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	2 cut(s)	362, 496
AccB1I	GGYRCC	1 cut(s)	1430
AccBSI	CCGCTC	1 cut(s)	304
AccI	GTMKAC	1 cut(s)	730
AccII	CGCG	2 cut(s)	48, 1395
AccIII	TCCGGA	1 cut(s)	390
AciI	CCGC	6 cut(s)	48, 194, 304, 307, 1393, 1486
AclWI	GGATC	2 cut(s)	22, 173
AcoI	YGGCCR	1 cut(s)	966
AcuI	CTGAAG	2 cut(s)	612, 1344
AcyI	GRCGYC	2 cut(s)	359, 493
AfaI	GTAC	3 cut(s)	143, 455, 949
AfiI	CCNNNNNNNGG	3 cut(s)	193, 437, 1222
AflIII	ACRYGT	2 cut(s)	351, 573
AgsI	TTSAA	7 cut(s)	73, 483, 643, 1048, 1316, 1364, 1511
AjnI	CCWGG	4 cut(s)	124, 270, 430, 1128
AjuI	GAANNNNNNNTTGG	6 cut(s)	46, 53, 78, 85, 420, 452
AloI	GAACNNNNNNTCC	2 cut(s)	1405, 1437
Alw21I	GWGCWC	2 cut(s)	985, 1336
Alw26I	GTCTC	1 cut(s)	1364
Alw44I	GTGCAC	1 cut(s)	1332
AlwI	GGATC	2 cut(s)	22, 173
Aor13HI	TCCGGA	1 cut(s)	390
AoxI	GGCC	4 cut(s)	49, 128, 915, 966
ApaLI	GTGCAC	1 cut(s)	1332
ApeKI	GCWGC	6 cut(s)	169, 512, 764, 864, 1139, 1289
AseI	ATTAAT	1 cut(s)	648
Asp700I	GAANNNNTTC	2 cut(s)	10, 103
AspS9I	GGNCC	3 cut(s)	50, 128, 1126
AsuII	TTCGAA	1 cut(s)	743
AvaII	GGWCC	1 cut(s)	1126
BaeGI	GKGCMC	2 cut(s)	1336, 1435
BalI	TGGCCA	1 cut(s)	968
BanI	GGYRCC	1 cut(s)	1430
BanII	GRGCYC	1 cut(s)	42
BbsI	GAAGAC	1 cut(s)	1171
Bbv12I	GWGCWC	2 cut(s)	985, 1336
BbvI	GCAGC	6 cut(s)	156, 524, 751, 876, 1151, 1301
BccI	CCATC	2 cut(s)	390, 998
BceAI	ACGGC	1 cut(s)	1080
BciT130I	CCWGG	4 cut(s)	126, 272, 432, 1130
BciVI	GTATCC	2 cut(s)	1223, 1459
BcoDI	GTCTC	1 cut(s)	1364
BfaI	CTAG	2 cut(s)	836, 1346
BfmI	CTRYAG	4 cut(s)	510, 580, 765, 1287
BfuI	GTATCC	2 cut(s)	1223, 1459
BglII	AGATCT	2 cut(s)	1020, 1118
BisI	GCNGC	9 cut(s)	49, 170, 305, 513, 765, 865, 1140, 1290, 1393
BlsI	GCNGC	9 cut(s)	50, 171, 306, 514, 766, 866, 1141, 1291, 1394
BmcAI	AGTACT	1 cut(s)	949
Bme1390I	CCNGG	4 cut(s)	126, 272, 432, 1130
Bme18I	GGWCC	1 cut(s)	1126
BmgT120I	GGNCC	3 cut(s)	50, 128, 1126
BmiI	GGNNCC	1 cut(s)	1432
BmrFI	CCNGG	4 cut(s)	126, 272, 432, 1130
BmsI	GCATC	3 cut(s)	552, 616, 670
BpiI	GAAGAC	1 cut(s)	1171
BpmI	CTGGAG	1 cut(s)	453
Bpu14I	TTCGAA	1 cut(s)	743
BsaHI	GRCGYC	2 cut(s)	359, 493
BsaJI	CCNNGG	2 cut(s)	125, 373
BsaWI	WCCGGW	1 cut(s)	390
Bsc4I	CCNNNNNNNGG	3 cut(s)	193, 437, 1222
Bse118I	RCCGGY	1 cut(s)	1272
Bse1I	ACTGG	5 cut(s)	955, 972, 1196, 1357, 1444
Bse3DI	GCAATG	3 cut(s)	547, 708, 1267
BseAI	TCCGGA	1 cut(s)	390
BseBI	CCWGG	4 cut(s)	126, 272, 432, 1130
BseDI	CCNNGG	2 cut(s)	125, 373
BseGI	GGATG	4 cut(s)	352, 405, 804, 1009
BseLI	CCNNNNNNNGG	3 cut(s)	193, 437, 1222
BseMI	GCAATG	3 cut(s)	547, 708, 1267
BseMII	CTCAG	4 cut(s)	36, 321, 408, 1552
BseNI	ACTGG	5 cut(s)	955, 972, 1196, 1357, 1444
BseSI	GKGCMC	2 cut(s)	1336, 1435
BseXI	GCAGC	6 cut(s)	156, 524, 751, 876, 1151, 1301
BseYI	CCCAGC	1 cut(s)	220
BsgI	GTGCAG	1 cut(s)	1158
Bsh1236I	CGCG	2 cut(s)	48, 1395
BshFI	GGCC	4 cut(s)	51, 130, 917, 968
BshNI	GGYRCC	1 cut(s)	1430
BsiHKAI	GWGCWC	2 cut(s)	985, 1336
BsiSI	CCGG	2 cut(s)	391, 1273
BslI	CCNNNNNNNGG	3 cut(s)	193, 437, 1222
BsmAI	GTCTC	1 cut(s)	1364
BsmI	GAATGC	2 cut(s)	867, 1191
BsnI	GGCC	4 cut(s)	51, 130, 917, 968
Bsp119I	TTCGAA	1 cut(s)	743
Bsp1286I	GDGCHC	4 cut(s)	42, 985, 1336, 1435
Bsp13I	TCCGGA	1 cut(s)	390
Bsp143I	GATC	8 cut(s)	27, 94, 178, 838, 850, 1020, 1118, 1342
BspACI	CCGC	6 cut(s)	48, 194, 304, 307, 1393, 1486
BspANI	GGCC	4 cut(s)	51, 130, 917, 968
BspCNI	CTCAG	4 cut(s)	35, 322, 409, 1551
BspEI	TCCGGA	1 cut(s)	390
BspFNI	CGCG	2 cut(s)	48, 1395
BspHI	TCATGA	1 cut(s)	628
BspLI	GGNNCC	1 cut(s)	1432
BspMAI	CTGCAG	3 cut(s)	514, 769, 1291
BspPI	GGATC	2 cut(s)	22, 173
BspT104I	TTCGAA	1 cut(s)	743
BspT107I	GGYRCC	1 cut(s)	1430
BsrBI	CCGCTC	1 cut(s)	304
BsrDI	GCAATG	3 cut(s)	547, 708, 1267
BsrFI	RCCGGY	1 cut(s)	1272
BsrI	ACTGG	5 cut(s)	955, 972, 1196, 1357, 1444
BssAI	RCCGGY	1 cut(s)	1272
BssECI	CCNNGG	2 cut(s)	125, 373
BssMI	GATC	8 cut(s)	27, 94, 178, 838, 850, 1020, 1118, 1342
BssNI	GRCGYC	2 cut(s)	359, 493
BssT1I	CCWWGG	1 cut(s)	373
Bst2UI	CCWGG	4 cut(s)	126, 272, 432, 1130
Bst4CI	ACNGT	7 cut(s)	92, 103, 528, 895, 958, 1058, 1177
Bst6I	CTCTTC	3 cut(s)	284, 765, 1320
BstACI	GRCGYC	2 cut(s)	359, 493
BstBI	TTCGAA	1 cut(s)	743
BstC8I	GCNNGC	1 cut(s)	1274
BstDEI	CTNAG	6 cut(s)	22, 330, 417, 1122, 1538, 1551
BstF5I	GGATG	4 cut(s)	352, 405, 804, 1009
BstFNI	CGCG	2 cut(s)	48, 1395
BstKTI	GATC	8 cut(s)	30, 97, 181, 841, 853, 1023, 1121, 1345
BstMAI	GTCTC	1 cut(s)	1364
BstMBI	GATC	8 cut(s)	27, 94, 178, 838, 850, 1020, 1118, 1342
BstMWI	GCNNNNNNNGC	6 cut(s)	23, 127, 136, 166, 512, 914
BstNI	CCWGG	4 cut(s)	126, 272, 432, 1130
BstNSI	RCATGY	2 cut(s)	355, 577
BstSCI	CCNGG	4 cut(s)	124, 270, 430, 1128
BstSFI	CTRYAG	4 cut(s)	510, 580, 765, 1287
BstSLI	GKGCMC	2 cut(s)	1336, 1435
BstUI	CGCG	2 cut(s)	48, 1395
BstV1I	GCAGC	6 cut(s)	156, 524, 751, 876, 1151, 1301
BstV2I	GAAGAC	1 cut(s)	1171
BstX2I	RGATCY	2 cut(s)	1020, 1118
BstYI	RGATCY	2 cut(s)	1020, 1118
BsuI	GTATCC	2 cut(s)	1223, 1459
BsuRI	GGCC	4 cut(s)	51, 130, 917, 968
BtgZI	GCGATG	1 cut(s)	1410
BtsCI	GGATG	4 cut(s)	352, 405, 804, 1009
BtsIMutI	CAGTG	4 cut(s)	369, 588, 1054, 1203
Cac8I	GCNNGC	1 cut(s)	1274
CciI	TCATGA	1 cut(s)	628
Cfr10I	RCCGGY	1 cut(s)	1272
Cfr13I	GGNCC	3 cut(s)	50, 128, 1126
CsiI	ACCWGGT	1 cut(s)	1128
Csp6I	GTAC	3 cut(s)	142, 454, 948
CviAII	CATG	5 cut(s)	176, 352, 574, 629, 1453
CviQI	GTAC	3 cut(s)	142, 454, 948
DdeI	CTNAG	6 cut(s)	22, 330, 417, 1122, 1538, 1551
DpnI	GATC	8 cut(s)	29, 96, 180, 840, 852, 1022, 1120, 1344
DpnII	GATC	8 cut(s)	27, 94, 178, 838, 850, 1020, 1118, 1342
EaeI	YGGCCR	1 cut(s)	966
Eam1104I	CTCTTC	3 cut(s)	284, 765, 1320
EarI	CTCTTC	3 cut(s)	284, 765, 1320
EciI	GGCGGA	2 cut(s)	322, 1475
Eco130I	CCWWGG	1 cut(s)	373
Eco24I	GRGCYC	1 cut(s)	42
Eco32I	GATATC	1 cut(s)	620
Eco47I	GGWCC	1 cut(s)	1126
Eco57I	CTGAAG	2 cut(s)	612, 1344
EcoRII	CCWGG	4 cut(s)	124, 270, 430, 1128
EcoRV	GATATC	1 cut(s)	620
EcoT14I	CCWWGG	1 cut(s)	373
EcoT22I	ATGCAT	1 cut(s)	663
EcoT38I	GRGCYC	1 cut(s)	42
ErhI	CCWWGG	1 cut(s)	373
FaeI	CATG	5 cut(s)	179, 355, 577, 632, 1456
FalI	AAGNNNNNCTT	2 cut(s)	1007, 1039
FatI	CATG	5 cut(s)	175, 351, 573, 628, 1452
FblI	GTMKAC	1 cut(s)	730
Fnu4HI	GCNGC	9 cut(s)	49, 170, 305, 513, 765, 865, 1140, 1290, 1393
FokI	GGATG	4 cut(s)	359, 412, 791, 1016
FriOI	GRGCYC	1 cut(s)	42
Fsp4HI	GCNGC	9 cut(s)	49, 170, 305, 513, 765, 865, 1140, 1290, 1393
FspBI	CTAG	2 cut(s)	836, 1346
GluI	GCNGC	9 cut(s)	49, 170, 305, 513, 765, 865, 1140, 1290, 1393
GsaI	CCCAGC	1 cut(s)	224
GsuI	CTGGAG	1 cut(s)	453
HaeIII	GGCC	4 cut(s)	51, 130, 917, 968
HapII	CCGG	2 cut(s)	391, 1273
Hin1I	GRCGYC	2 cut(s)	359, 493
Hin1II	CATG	5 cut(s)	179, 355, 577, 632, 1456
HindIII	AAGCTT	5 cut(s)	9, 119, 383, 827, 1385
HinfI	GANTC	4 cut(s)	479, 727, 740, 1048
HpaII	CCGG	2 cut(s)	391, 1273
Hpy166II	GTNNAC	4 cut(s)	357, 367, 731, 1334
Hpy188I	TCNGA	5 cut(s)	183, 519, 666, 795, 1071
Hpy188III	TCNNGA	9 cut(s)	114, 391, 629, 924, 1001, 1346, 1425, 1466, 1500
Hpy8I	GTNNAC	4 cut(s)	357, 367, 731, 1334
Hpy99I	CGWCG	1 cut(s)	498
HpyAV	CCTTC	8 cut(s)	337, 587, 739, 745, 818, 1009, 1370, 1403
HpyCH4III	ACNGT	7 cut(s)	92, 103, 528, 895, 958, 1058, 1177
HpyCH4IV	ACGT	2 cut(s)	359, 493
HpyF10VI	GCNNNNNNNGC	6 cut(s)	23, 127, 136, 166, 512, 914
HpyF3I	CTNAG	6 cut(s)	22, 330, 417, 1122, 1538, 1551
HpySE526I	ACGT	2 cut(s)	359, 493
Hsp92I	GRCGYC	2 cut(s)	359, 493
Hsp92II	CATG	5 cut(s)	179, 355, 577, 632, 1456
Kpn2I	TCCGGA	1 cut(s)	390
KroI	GCCGGC	1 cut(s)	1272
KroNI	GCCGGC	1 cut(s)	1274
Kzo9I	GATC	8 cut(s)	27, 94, 178, 838, 850, 1020, 1118, 1342
LmnI	GCTCC	3 cut(s)	511, 520, 1379
Lsp1109I	GCAGC	6 cut(s)	156, 524, 751, 876, 1151, 1301
LweI	GCATC	3 cut(s)	552, 616, 670
MabI	ACCWGGT	1 cut(s)	1128
MaeI	CTAG	2 cut(s)	836, 1346
MaeII	ACGT	2 cut(s)	359, 493
MaeIII	GTNAC	2 cut(s)	86, 974
MalI	GATC	8 cut(s)	29, 96, 180, 840, 852, 1022, 1120, 1344
MbiI	CCGCTC	1 cut(s)	304
MboI	GATC	8 cut(s)	27, 94, 178, 838, 850, 1020, 1118, 1342
MboII	GAAGA	8 cut(s)	298, 301, 782, 1015, 1171, 1287, 1337, 1481
MfeI	CAATTG	3 cut(s)	206, 483, 501
MflI	RGATCY	2 cut(s)	1020, 1118
MhlI	GDGCHC	4 cut(s)	42, 985, 1336, 1435
MlsI	TGGCCA	1 cut(s)	968
MluNI	TGGCCA	1 cut(s)	968
MlyI	GAGTC	1 cut(s)	736
MmeI	TCCRAC	3 cut(s)	456, 469, 526
Mox20I	TGGCCA	1 cut(s)	968
Mph1103I	ATGCAT	1 cut(s)	663
MroI	TCCGGA	1 cut(s)	390
MroNI	GCCGGC	1 cut(s)	1272
MroXI	GAANNNNTTC	2 cut(s)	10, 103
MscI	TGGCCA	1 cut(s)	968
MseI	TTAA	7 cut(s)	134, 317, 458, 603, 648, 944, 995
MslI	CAYNNNNRTG	2 cut(s)	627, 1196
Msp20I	TGGCCA	1 cut(s)	968
MspA1I	CMGCKG	1 cut(s)	815
MspI	CCGG	2 cut(s)	391, 1273
MspR9I	CCNGG	4 cut(s)	126, 272, 432, 1130
MunI	CAATTG	3 cut(s)	206, 483, 501
Mva1269I	GAATGC	2 cut(s)	867, 1191
MvaI	CCWGG	4 cut(s)	126, 272, 432, 1130
MvnI	CGCG	2 cut(s)	48, 1395
MwoI	GCNNNNNNNGC	6 cut(s)	23, 127, 136, 166, 512, 914
NaeI	GCCGGC	1 cut(s)	1274
NdeII	GATC	8 cut(s)	27, 94, 178, 838, 850, 1020, 1118, 1342
NgoMIV	GCCGGC	1 cut(s)	1272
NlaIII	CATG	5 cut(s)	179, 355, 577, 632, 1456
NlaIV	GGNNCC	1 cut(s)	1432
NmeAIII	GCCGAG	1 cut(s)	1514
NsiI	ATGCAT	1 cut(s)	663
NspI	RCATGY	2 cut(s)	355, 577
NspV	TTCGAA	1 cut(s)	743
PagI	TCATGA	1 cut(s)	628
PciI	ACATGT	2 cut(s)	351, 573
PctI	GAATGC	2 cut(s)	867, 1191
PdiI	GCCGGC	1 cut(s)	1274
PdmI	GAANNNNTTC	2 cut(s)	10, 103
PfeI	GAWTC	3 cut(s)	479, 740, 1048
PflFI	GACNNNGTC	1 cut(s)	495
PkrI	GCNGC	9 cut(s)	50, 171, 306, 514, 766, 866, 1141, 1291, 1394
PleI	GAGTC	1 cut(s)	735
PpsI	GAGTC	1 cut(s)	735
PscI	ACATGT	2 cut(s)	351, 573
PshBI	ATTAAT	1 cut(s)	648
Psp6I	CCWGG	4 cut(s)	124, 270, 430, 1128
PspFI	CCCAGC	1 cut(s)	220
PspGI	CCWGG	4 cut(s)	124, 270, 430, 1128
PspN4I	GGNNCC	1 cut(s)	1432
PspPI	GGNCC	3 cut(s)	50, 128, 1126
PstI	CTGCAG	3 cut(s)	514, 769, 1291
PsuI	RGATCY	2 cut(s)	1020, 1118
PsyI	GACNNNGTC	1 cut(s)	495
PvuII	CAGCTG	1 cut(s)	815
RsaI	GTAC	3 cut(s)	143, 455, 949
RsaNI	GTAC	3 cut(s)	142, 454, 948
RseI	CAYNNNNRTG	2 cut(s)	627, 1196
SaqAI	TTAA	7 cut(s)	134, 317, 458, 603, 648, 944, 995
SatI	GCNGC	9 cut(s)	49, 170, 305, 513, 765, 865, 1140, 1290, 1393
Sau3AI	GATC	8 cut(s)	27, 94, 178, 838, 850, 1020, 1118, 1342
Sau96I	GGNCC	3 cut(s)	50, 128, 1126
ScaI	AGTACT	1 cut(s)	949
SchI	GAGTC	1 cut(s)	736
ScrFI	CCNGG	4 cut(s)	126, 272, 432, 1130
SduI	GDGCHC	4 cut(s)	42, 985, 1336, 1435
SexAI	ACCWGGT	1 cut(s)	1128
SfaNI	GCATC	3 cut(s)	552, 616, 670
SfcI	CTRYAG	4 cut(s)	510, 580, 765, 1287
SfuI	TTCGAA	1 cut(s)	743
SinI	GGWCC	1 cut(s)	1126
SmiMI	CAYNNNNRTG	2 cut(s)	627, 1196
SsiI	CCGC	6 cut(s)	48, 194, 304, 307, 1393, 1486
SspMI	CTAG	2 cut(s)	836, 1346
StyD4I	CCNGG	4 cut(s)	124, 270, 430, 1128
StyI	CCWWGG	1 cut(s)	373
TaaI	ACNGT	7 cut(s)	92, 103, 528, 895, 958, 1058, 1177
TaiI	ACGT	2 cut(s)	362, 496
TaqI	TCGA	5 cut(s)	97, 610, 738, 743, 841
TatI	WGTACW	2 cut(s)	141, 947
TauI	GCSGC	3 cut(s)	51, 307, 1395
TfiI	GAWTC	3 cut(s)	479, 740, 1048
Tru1I	TTAA	7 cut(s)	134, 317, 458, 603, 648, 944, 995
Tru9I	TTAA	7 cut(s)	134, 317, 458, 603, 648, 944, 995
TscAI	CASTG	4 cut(s)	369, 595, 1061, 1203
TseI	GCWGC	6 cut(s)	169, 512, 764, 864, 1139, 1289
TspDTI	ATGAA	5 cut(s)	617, 666, 812, 1171, 1266
TspGWI	ACGGA	3 cut(s)	1004, 1205, 1243
TspRI	CASTG	4 cut(s)	369, 595, 1061, 1203
Tth111I	GACNNNGTC	1 cut(s)	495
VneI	GTGCAC	1 cut(s)	1332
VpaK11BI	GGWCC	1 cut(s)	1126
VspI	ATTAAT	1 cut(s)	648
XbaI	TCTAGA	1 cut(s)	1345
XceI	RCATGY	2 cut(s)	355, 577
XmiI	GTMKAC	1 cut(s)	730
XmnI	GAANNNNTTC	2 cut(s)	10, 103
XspI	CTAG	2 cut(s)	836, 1346
ZraI	GACGTC	2 cut(s)	360, 494
ZrmI	AGTACT	1 cut(s)	949
Zsp2I	ATGCAT	1 cut(s)	663

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.