Rh6AG440600

Large proline-rich protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6A
OG0005387
Physical Location & Seq
Reverse (-)
62826901 .. 62834655
7755 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6AG440600.1

Sequence Viewer

Length: 1980 bp
ATGGCAAATCAGTTCTCAAATGAAGGCTCTGGTCCCAGCAATGTTTCTGAGGAGACTTCTGATTCAACTGTTGAGATCAATATCAAGACTTTAGAGTCGCAGATATACAGTTTTCAAGTGGAAAAAAATATGCTAGTGTCCTTGTTCAAAGAAAAAATAGCTGATCAAACAGGCGTCCCAGTTGGTCAGCAGCGGTTGATTTTCAGGGGAAAGGTGCTCAAGGATGACCATCCCCTTTCCGAGTATCATTTGGAAAATGGGCATACATTGCACTTAGTTGTGAGGCAGCCATCCCAGCCACAAACTTCATCTGGTACTAGTTCTGCTGAGCCTAACGCTGATGCTGGTAATGAGGGTAATGGGGCTCCTCGTGGTCGCATAGGGCAGATTTCACACAGTGTAGTTCTTGGGACCTTCAATGTTGGAGATCAAGGTGAAGGCATGGCCCCAGATCTTAGTCGGGTCATTGGCGCAGTTTTGAATTCTATTGGAATTGGCAACCAAGCTACAACTAATGTTAATGGCAACATACAATCTACTATGCCAAATAATCCTGGTCAGTCTCCTCAAGGAAATGAAACAGAAGGGTTGCATGGTAATGCAAATAGTCAGACTCGAGGAGGAAATAATGCACAGTCTGGACTGACATTTTCTTCTCAGCCATTTCAAACTTTGCCTCAATTTCTGCAAACTCCCCTTGCTGCTGGAGCATCTCCCTTTCCTTCACTAAATACGCCAATTCCGGACGCTTTGAACACTCTCTCTGAGTTTGTGAACCGCATGGAGCGGGCATTATCACAAAATGGAGGCTACCAACAAAATATATCAGCAACAAACCCAGGAGACCTACCAAGGGTGAACTTACCTTCCAATGCTCAGGGGTTGCCCACACCTGAAGCCTTGGGCATTGTTCTTCGCAGTGCAGAACGACTTCTCAGCAGTCATGCTGCTTCTGCACTATCTCACATTGCAGGGCGCTTGGAACAAGAGGGAGCATCTTCTGATCCCTCTGCAAGGGGCCAAATTCAGACAGAATCTATTCAAGTAGGGCTTGCAATGCAACATCTAGGTGCTCTTCTTCTTGAGCTGGGCCGGACAATTTGGACACTCCGCATGGGACAATCTCCTGGAGAAGCTGTTGTTAATGCTGGACCAGCTGTTTATATTTCCCCATCAGGGCCTAATCCCATAATGGTGCAGCCTATTCCTTATCAAACAAGCTCCCCTTTTAGTGCTTCTGTACCCCTGTCGAATCCTATGAATTTTGGTCCTGTTGGCATTGGAAGTGCGCCAAGGAATGTAAACATTCATATACATGCTGGTACCTCACTTTCTGCACTTGGTGCTAGGGGAAGTAATGGGGAAGGGATGCAGGGAGAGCATCGTAATGGACCTGGGTCAAGGGATTCAGGTGCAGCTCGAGTGCTGCCAGTGAGAAATATTATTGCTACTGCTATCCCATCATCCCAAACTGGTATTGCAACTTCCAGTGCATCACAGCCTGGTTCAGGTGTATCTGTTCCACGGCCGCGTTCAGACTCTTCTCTTTCGTCCATCGTTGCTGAACTTAATTCACAGATTAGAAACTTTGTTGGTAATGCTCAAGGAAATGATGCAGTTCAATCAGGTCAAGAGGTGCCCAATGTTCAGAATTCATCTGCTGGAATTGGATCACGTAATAATTCAGGGAATGAGCAGCTCAGTAATTCAGATGTGAACGGAGGTCAGCAATCTAATGCGTCGCTACCTGGTTCCACATCTGAAAGTGATGTTCAGAAGGCTTCAGGAAGTGTACCTCCCTTGAGAGATGATTCAGGATTCCAAACCAGAGATTCTCTTTCAAGTGGACAAAATCCAATGCCATCTGAAAATGACAAAGGAAATGCTTCACAAACTGCTGCAAAACAGGATAAGACGGAGGGCGCAAAAGCTGTTCCACTTGGATTAGGACTTGGAATGTTGGAACGTAAGGTAAGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000280 GO:0001655 GO:0001822 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0006464 GO:0006473 GO:0006475 GO:0006508 GO:0006511 GO:0006515 GO:0006807 GO:0006915 GO:0006950 GO:0006974 GO:0006996 GO:0007029 GO:0007049 GO:0007059 GO:0007127 GO:0007129 GO:0007130 GO:0007154 GO:0007165 GO:0007275 GO:0007276 GO:0007283 GO:0007399 GO:0007417 GO:0007420 GO:0008104 GO:0008150 GO:0008152 GO:0008219 GO:0008630 GO:0009056 GO:0009057 GO:0009892 GO:0009894 GO:0009895 GO:0009987 GO:0010033 GO:0010243 GO:0010256 GO:0010498 GO:0010605 GO:0010941 GO:0012501 GO:0016043 GO:0018193 GO:0018205 GO:0018393 GO:0018394 GO:0019222 GO:0019538 GO:0019941 GO:0019953 GO:0022402 GO:0022414 GO:0022607 GO:0023052 GO:0030162 GO:0030163 GO:0030323 GO:0030324 GO:0030433 GO:0031323 GO:0031324 GO:0031329 GO:0031330 GO:0031593 GO:0031647 GO:0032268 GO:0032269 GO:0032434 GO:0032435 GO:0032501 GO:0032502 GO:0032504 GO:0032991 GO:0033036 GO:0033365 GO:0033554 GO:0034613 GO:0034976 GO:0035295 GO:0035556 GO:0035966 GO:0035967 GO:0036211 GO:0036503 GO:0042176 GO:0042177 GO:0042221 GO:0042771 GO:0042981 GO:0043021 GO:0043022 GO:0043067 GO:0043161 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043543 GO:0043632 GO:0044085 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044424 GO:0044444 GO:0044445 GO:0044464 GO:0044703 GO:0044877 GO:0045048 GO:0045132 GO:0045143 GO:0045184 GO:0045861 GO:0045995 GO:0048232 GO:0048285 GO:0048513 GO:0048519 GO:0048523 GO:0048609 GO:0048731 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0050821 GO:0050896 GO:0051171 GO:0051172 GO:0051179 GO:0051205 GO:0051234 GO:0051239 GO:0051246 GO:0051248 GO:0051276 GO:0051321 GO:0051603 GO:0051641 GO:0051704 GO:0051716 GO:0051788 GO:0060255 GO:0060322 GO:0060541 GO:0061024 GO:0061136 GO:0061857 GO:0061982 GO:0065007 GO:0065008 GO:0070059 GO:0070192 GO:0070193 GO:0070628 GO:0070727 GO:0070887 GO:0071218 GO:0071310 GO:0071704 GO:0071712 GO:0071816 GO:0071818 GO:0071840 GO:0072001 GO:0072331 GO:0072332 GO:0072379 GO:0072657 GO:0080090 GO:0090150 GO:0097190 GO:0097193 GO:0098813 GO:0140013 GO:0140030 GO:1901564 GO:1901565 GO:1901575 GO:1901698 GO:1901799 GO:1903046 GO:1903050 GO:1903051 GO:1903362 GO:1903363 GO:2000026 GO:2000058 GO:2000059
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
ubiquitin

Protein Analysis

659

Amino Acids

68.26

Weight (kDa)

5.7

Isoelectric Point (pI)

43.49

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Rad60-SLD PF11976 25 - 94 3.6e-08 Ubiquitin-2 like Rad60 SUMO-like
ubiquitin PF00240 26 - 96 6.3e-23 Ubiquitin family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 94
Acc65I GGTACC 1 cut(s) 1322
AccB1I GGYRCC 2 cut(s) 1322, 1636
AccBSI CCGCTC 1 cut(s) 787
AccII CGCG 1 cut(s) 1531
AccIII TCCGGA 1 cut(s) 742
AciI CCGC 5 cut(s) 193, 778, 787, 1111, 1529
AclWI GGATC 2 cut(s) 998, 1678
AcoI YGGCCR 1 cut(s) 1526
AcsI RAATTY 4 cut(s) 481, 1023, 1261, 1651
AcuI CTGAAG 2 cut(s) 915, 1767
AcyI GRCGYC 1 cut(s) 174
AdeI CACNNNGTG 2 cut(s) 398, 1343
AfaI GTAC 4 cut(s) 316, 1242, 1324, 1794
AfiI CCNNNNNNNGG 4 cut(s) 853, 1014, 1176, 1508
AhlI ACTAGT 1 cut(s) 317
AjnI CCWGG 6 cut(s) 553, 838, 1126, 1393, 1501, 1747
AloI GAACNNNNNNTCC 2 cut(s) 851, 883
AluBI AGCT 9 cut(s) 161, 506, 1087, 1136, 1157, 1221, 1418, 1699, 1931
AluI AGCT 9 cut(s) 161, 506, 1087, 1136, 1157, 1221, 1418, 1699, 1931
Alw21I GWGCWC 2 cut(s) 219, 1075
Alw26I GTCTC 3 cut(s) 47, 567, 837
AlwI GGATC 2 cut(s) 998, 1678
Ama87I CYCGRG 2 cut(s) 615, 1419
Aor13HI TCCGGA 1 cut(s) 742
AoxI GGCC 5 cut(s) 444, 1018, 1090, 1178, 1526
ApeKI GCWGC 9 cut(s) 190, 286, 701, 947, 1198, 1415, 1426, 1696, 1898
ApoI RAATTY 4 cut(s) 481, 1023, 1261, 1651
Asp700I GAANNNNTTC 3 cut(s) 930, 1038, 1885
Asp718I GGTACC 1 cut(s) 1322
AspLEI GCGC 4 cut(s) 473, 978, 1291, 1925
AspS9I GGNCC 9 cut(s) 32, 411, 445, 1018, 1090, 1151, 1178, 1268, 1391
AsuHPI GGTGA 2 cut(s) 446, 868
AvaI CYCGRG 2 cut(s) 615, 1419
AvaII GGWCC 5 cut(s) 32, 411, 1151, 1268, 1391
BaeGI GKGCMC 1 cut(s) 1641
BanI GGYRCC 2 cut(s) 1322, 1636
BanII GRGCYC 1 cut(s) 367
BarI GAAGNNNNNNTAC 2 cut(s) 1468, 1500
BauI CACGAG 1 cut(s) 369
Bbv12I GWGCWC 2 cut(s) 219, 1075
BbvI GCAGC 9 cut(s) 202, 298, 688, 934, 1210, 1413, 1427, 1708, 1885
BccI CCATC 6 cut(s) 237, 298, 1180, 1468, 1562, 1870
BceAI ACGGC 1 cut(s) 1541
BciT130I CCWGG 6 cut(s) 555, 840, 1128, 1395, 1503, 1749
BclI TGATCA 1 cut(s) 163
BcoDI GTCTC 3 cut(s) 47, 567, 837
BcuI ACTAGT 1 cut(s) 317
BfaI CTAG 4 cut(s) 134, 318, 1067, 1347
BfoI RGCGCY 1 cut(s) 979
BglII AGATCT 1 cut(s) 451
BlpI GCTNAGC 1 cut(s) 327
Bme1390I CCNGG 6 cut(s) 555, 840, 1128, 1395, 1503, 1749
Bme18I GGWCC 5 cut(s) 32, 411, 1151, 1268, 1391
BmeT110I CYCGRG 2 cut(s) 615, 1419
BmgT120I GGNCC 9 cut(s) 32, 411, 445, 1018, 1090, 1151, 1178, 1268, 1391
BmiI GGNNCC 8 cut(s) 34, 366, 412, 447, 1019, 1324, 1638, 1753
BmrFI CCNGG 6 cut(s) 555, 840, 1128, 1395, 1503, 1749
BmrI ACTGGG 1 cut(s) 173
BmsI GCATC 7 cut(s) 331, 719, 1004, 1359, 1390, 1502, 1603
BmuI ACTGGG 1 cut(s) 173
BoxI GACNNNNGTC 1 cut(s) 1396
BpmI CTGGAG 2 cut(s) 726, 1149
Bpu10I CCTNAGC 1 cut(s) 876
Bpu1102I GCTNAGC 1 cut(s) 327
BpuEI CTTGAG 5 cut(s) 203, 552, 1103, 1587, 1822
BsaAI YACGTR 1 cut(s) 1676
BsaBI GATNNNNATC 2 cut(s) 80, 228
BsaHI GRCGYC 1 cut(s) 174
BsaI GGTCTC 1 cut(s) 837
BsaJI CCNNGG 6 cut(s) 838, 851, 900, 1292, 1394, 1523
BsaWI WCCGGW 1 cut(s) 742
BsaXI ACNNNNNCTCC 2 cut(s) 1122, 1152
Bsc4I CCNNNNNNNGG 4 cut(s) 853, 1014, 1176, 1508
Bse1I ACTGG 4 cut(s) 179, 1430, 1477, 1488
Bse3DI GCAATG 4 cut(s) 46, 266, 966, 1062
Bse8I GATNNNNATC 2 cut(s) 80, 228
BseAI TCCGGA 1 cut(s) 742
BseBI CCWGG 6 cut(s) 555, 840, 1128, 1395, 1503, 1749
BseDI CCNNGG 6 cut(s) 838, 851, 900, 1292, 1394, 1523
BseGI GGATG 5 cut(s) 229, 229, 290, 1374, 1463
BseJI GATNNNNATC 2 cut(s) 80, 228
BseLI CCNNNNNNNGG 4 cut(s) 853, 1014, 1176, 1508
BseMI GCAATG 4 cut(s) 46, 266, 966, 1062
BseMII CTCAG 7 cut(s) 39, 318, 671, 756, 890, 949, 1714
BseNI ACTGG 4 cut(s) 179, 1430, 1477, 1488
BseRI GAGGAG 4 cut(s) 65, 357, 555, 633
BseSI GKGCMC 1 cut(s) 1641
BseX3I CGGCCG 1 cut(s) 1526
BseXI GCAGC 9 cut(s) 202, 298, 688, 934, 1210, 1413, 1427, 1708, 1885
BseYI CCCAGC 3 cut(s) 35, 294, 1087
BsgI GTGCAG 5 cut(s) 939, 942, 1217, 1320, 1434
Bsh1236I CGCG 1 cut(s) 1531
Bsh1285I CGRYCG 1 cut(s) 1529
BshFI GGCC 5 cut(s) 446, 1020, 1092, 1180, 1528
BshNI GGYRCC 2 cut(s) 1322, 1636
BsiEI CGRYCG 1 cut(s) 1529
BsiHKAI GWGCWC 2 cut(s) 219, 1075
BsiHKCI CYCGRG 2 cut(s) 615, 1419
BsiSI CCGG 2 cut(s) 743, 1093
BslFI GGGAC 4 cut(s) 18, 161, 424, 1131
BslI CCNNNNNNNGG 4 cut(s) 853, 1014, 1176, 1508
BsmAI GTCTC 3 cut(s) 47, 567, 837
BsmFI GGGAC 4 cut(s) 18, 161, 424, 1131
BsnI GGCC 5 cut(s) 446, 1020, 1092, 1180, 1528
Bso31I GGTCTC 1 cut(s) 837
BsoBI CYCGRG 2 cut(s) 615, 1419
Bsp1286I GDGCHC 4 cut(s) 219, 367, 1075, 1641
Bsp13I TCCGGA 1 cut(s) 742
Bsp143I GATC 6 cut(s) 75, 163, 427, 451, 1003, 1670
Bsp1720I GCTNAGC 1 cut(s) 327
BspACI CCGC 5 cut(s) 193, 778, 787, 1111, 1529
BspANI GGCC 5 cut(s) 446, 1020, 1092, 1180, 1528
BspCNI CTCAG 7 cut(s) 40, 319, 670, 757, 889, 948, 1713
BspEI TCCGGA 1 cut(s) 742
BspFNI CGCG 1 cut(s) 1531
BspLI GGNNCC 8 cut(s) 34, 366, 412, 447, 1019, 1324, 1638, 1753
BspPI GGATC 2 cut(s) 998, 1678
BspQI GCTCTTC 1 cut(s) 1080
BspT107I GGYRCC 2 cut(s) 1322, 1636
BspTNI GGTCTC 1 cut(s) 837
BsrBI CCGCTC 1 cut(s) 787
BsrDI GCAATG 4 cut(s) 46, 266, 966, 1062
BsrI ACTGG 4 cut(s) 179, 1430, 1477, 1488
BssECI CCNNGG 6 cut(s) 838, 851, 900, 1292, 1394, 1523
BssMI GATC 6 cut(s) 75, 163, 427, 451, 1003, 1670
BssNI GRCGYC 1 cut(s) 174
BssSI CACGAG 1 cut(s) 369
BssT1I CCWWGG 3 cut(s) 851, 900, 1292
Bst2BI CACGAG 1 cut(s) 369
Bst2UI CCWGG 6 cut(s) 555, 840, 1128, 1395, 1503, 1749
Bst4CI ACNGT 4 cut(s) 70, 110, 398, 636
Bst6I CTCTTC 2 cut(s) 1080, 1546
BstACI GRCGYC 1 cut(s) 174
BstAPI GCANNNNNTGC 2 cut(s) 268, 1343
BstBAI YACGTR 1 cut(s) 1676
BstC8I GCNNGC 2 cut(s) 789, 1053
BstDEI CTNAG 9 cut(s) 48, 274, 327, 455, 657, 765, 876, 935, 1700
BstDSI CCRYGG 1 cut(s) 1523
BstENI CCTNNNNNAGG 2 cut(s) 1012, 1506
BstF5I GGATG 5 cut(s) 229, 229, 290, 1374, 1463
BstFNI CGCG 1 cut(s) 1531
BstH2I RGCGCY 1 cut(s) 979
BstHHI GCGC 4 cut(s) 473, 978, 1291, 1925
BstKTI GATC 6 cut(s) 78, 166, 430, 454, 1006, 1673
BstMAI GTCTC 3 cut(s) 47, 567, 837
BstMBI GATC 6 cut(s) 75, 163, 427, 451, 1003, 1670
BstMCI CGRYCG 1 cut(s) 1529
BstMWI GCNNNNNNNGC 8 cut(s) 268, 295, 707, 953, 1057, 1154, 1343, 1378
BstNI CCWGG 6 cut(s) 555, 840, 1128, 1395, 1503, 1749
BstNSI RCATGY 1 cut(s) 1319
BstPAI GACNNNNGTC 1 cut(s) 1396
BstSCI CCNGG 6 cut(s) 553, 838, 1126, 1393, 1501, 1747
BstSLI GKGCMC 1 cut(s) 1641
BstUI CGCG 1 cut(s) 1531
BstV1I GCAGC 9 cut(s) 202, 298, 688, 934, 1210, 1413, 1427, 1708, 1885
BstX2I RGATCY 1 cut(s) 451
BstYI RGATCY 1 cut(s) 451
BstZI CGGCCG 1 cut(s) 1526
BsuRI GGCC 5 cut(s) 446, 1020, 1092, 1180, 1528
BtgI CCRYGG 1 cut(s) 1523
BtsCI GGATG 5 cut(s) 229, 229, 290, 1374, 1463
BtsI GCAGTG 1 cut(s) 925
BtsIMutI CAGTG 4 cut(s) 403, 925, 1437, 1495
Cac8I GCNNGC 2 cut(s) 789, 1053
CfoI GCGC 4 cut(s) 473, 978, 1291, 1925
Cfr13I GGNCC 9 cut(s) 32, 411, 445, 1018, 1090, 1151, 1178, 1268, 1391
CseI GACGC 3 cut(s) 163, 755, 1728
CsiI ACCWGGT 1 cut(s) 1747
Csp6I GTAC 4 cut(s) 315, 1241, 1323, 1793
CviAII CATG 6 cut(s) 442, 593, 781, 944, 1114, 1316
CviQI GTAC 4 cut(s) 315, 1241, 1323, 1793
DdeI CTNAG 9 cut(s) 48, 274, 327, 455, 657, 765, 876, 935, 1700
DpnI GATC 6 cut(s) 77, 165, 429, 453, 1005, 1672
DpnII GATC 6 cut(s) 75, 163, 427, 451, 1003, 1670
DraIII CACNNNGTG 2 cut(s) 398, 1343
DrdI GACNNNNNNGTC 1 cut(s) 94
DseDI GACNNNNNNGTC 1 cut(s) 94
EaeI YGGCCR 1 cut(s) 1526
EagI CGGCCG 1 cut(s) 1526
Eam1104I CTCTTC 2 cut(s) 1080, 1546
EarI CTCTTC 2 cut(s) 1080, 1546
EclXI CGGCCG 1 cut(s) 1526
Eco130I CCWWGG 3 cut(s) 851, 900, 1292
Eco24I GRGCYC 1 cut(s) 367
Eco31I GGTCTC 1 cut(s) 837
Eco47I GGWCC 5 cut(s) 32, 411, 1151, 1268, 1391
Eco52I CGGCCG 1 cut(s) 1526
Eco57I CTGAAG 2 cut(s) 915, 1767
Eco88I CYCGRG 2 cut(s) 615, 1419
EcoNI CCTNNNNNAGG 2 cut(s) 1012, 1506
EcoO109I RGGNCCY 2 cut(s) 411, 1178
EcoRI GAATTC 2 cut(s) 481, 1651
EcoRII CCWGG 6 cut(s) 553, 838, 1126, 1393, 1501, 1747
EcoT14I CCWWGG 3 cut(s) 851, 900, 1292
EcoT38I GRGCYC 1 cut(s) 367
ErhI CCWWGG 3 cut(s) 851, 900, 1292
FaeI CATG 6 cut(s) 445, 596, 784, 947, 1117, 1319
FalI AAGNNNNNCTT 4 cut(s) 1035, 1067, 1210, 1242
FaqI GGGAC 4 cut(s) 18, 161, 424, 1131
FatI CATG 6 cut(s) 441, 592, 780, 943, 1113, 1315
FauI CCCGC 1 cut(s) 780
FbaI TGATCA 1 cut(s) 163
FokI GGATG 5 cut(s) 216, 236, 277, 1381, 1450
FriOI GRGCYC 1 cut(s) 367
FspBI CTAG 4 cut(s) 134, 318, 1067, 1347
GlaI GCGC 4 cut(s) 472, 977, 1290, 1924
GsaI CCCAGC 3 cut(s) 39, 298, 1091
GsuI CTGGAG 2 cut(s) 726, 1149
HaeII RGCGCY 1 cut(s) 979
HaeIII GGCC 5 cut(s) 446, 1020, 1092, 1180, 1528
HapII CCGG 2 cut(s) 743, 1093
HgaI GACGC 3 cut(s) 163, 755, 1728
HhaI GCGC 4 cut(s) 473, 978, 1291, 1925
Hin1I GRCGYC 1 cut(s) 174
Hin1II CATG 6 cut(s) 445, 596, 784, 947, 1117, 1319
Hin6I GCGC 4 cut(s) 471, 976, 1289, 1923
HinP1I GCGC 4 cut(s) 471, 976, 1289, 1923
HpaII CCGG 2 cut(s) 743, 1093
HphI GGTGA 2 cut(s) 446, 868
Hpy166II GTNNAC 6 cut(s) 775, 859, 1303, 1717, 1793, 1847
Hpy188III TCNNGA 7 cut(s) 85, 639, 743, 1082, 1631, 1785, 1815
Hpy8I GTNNAC 6 cut(s) 775, 859, 1303, 1717, 1793, 1847
Hpy99I CGWCG 1 cut(s) 1744
HpyAV CCTTC 8 cut(s) 17, 424, 431, 578, 732, 876, 1358, 1771
HpyCH4III ACNGT 4 cut(s) 70, 110, 398, 636
HpyCH4IV ACGT 2 cut(s) 1675, 1966
HpyF10VI GCNNNNNNNGC 8 cut(s) 268, 295, 707, 953, 1057, 1154, 1343, 1378
HpyF3I CTNAG 9 cut(s) 48, 274, 327, 455, 657, 765, 876, 935, 1700
HpySE526I ACGT 2 cut(s) 1675, 1966
Hsp92I GRCGYC 1 cut(s) 174
Hsp92II CATG 6 cut(s) 445, 596, 784, 947, 1117, 1319
HspAI GCGC 4 cut(s) 471, 976, 1289, 1923
Kpn2I TCCGGA 1 cut(s) 742
KpnI GGTACC 1 cut(s) 1326
Ksp22I TGATCA 1 cut(s) 163
Kzo9I GATC 6 cut(s) 75, 163, 427, 451, 1003, 1670
LguI GCTCTTC 1 cut(s) 1080
LmnI GCTCC 5 cut(s) 370, 707, 784, 992, 1226
Lsp1109I GCAGC 9 cut(s) 202, 298, 688, 934, 1210, 1413, 1427, 1708, 1885
LweI GCATC 7 cut(s) 331, 719, 1004, 1359, 1390, 1502, 1603
MabI ACCWGGT 1 cut(s) 1747
MaeI CTAG 4 cut(s) 134, 318, 1067, 1347
MaeII ACGT 2 cut(s) 1675, 1966
MalI GATC 6 cut(s) 77, 165, 429, 453, 1005, 1672
MbiI CCGCTC 1 cut(s) 787
MboI GATC 6 cut(s) 75, 163, 427, 451, 1003, 1670
MboII GAAGA 6 cut(s) 645, 905, 990, 1067, 1070, 1533
MflI RGATCY 1 cut(s) 451
MhlI GDGCHC 4 cut(s) 219, 367, 1075, 1641
MlyI GAGTC 3 cut(s) 104, 607, 1532
MmeI TCCRAC 2 cut(s) 403, 1941
MroI TCCGGA 1 cut(s) 742
MroXI GAANNNNTTC 3 cut(s) 930, 1038, 1885
MseI TTAA 3 cut(s) 519, 1143, 1569
MslI CAYNNNNRTG 5 cut(s) 597, 1068, 1193, 1314, 1386
MspA1I CMGCKG 2 cut(s) 193, 1157
MspI CCGG 2 cut(s) 743, 1093
MspR9I CCNGG 6 cut(s) 555, 840, 1128, 1395, 1503, 1749
MvaI CCWGG 6 cut(s) 555, 840, 1128, 1395, 1503, 1749
MvnI CGCG 1 cut(s) 1531
MwoI GCNNNNNNNGC 8 cut(s) 268, 295, 707, 953, 1057, 1154, 1343, 1378
NdeII GATC 6 cut(s) 75, 163, 427, 451, 1003, 1670
NlaIII CATG 6 cut(s) 445, 596, 784, 947, 1117, 1319
NlaIV GGNNCC 8 cut(s) 34, 366, 412, 447, 1019, 1324, 1638, 1753
NspI RCATGY 1 cut(s) 1319
PaeR7I CTCGAG 2 cut(s) 615, 1419
PciSI GCTCTTC 1 cut(s) 1080
PdmI GAANNNNTTC 3 cut(s) 930, 1038, 1885
PfeI GAWTC 7 cut(s) 62, 1034, 1252, 1406, 1811, 1818, 1832
PfoI TCCNGGA 1 cut(s) 1126
PleI GAGTC 3 cut(s) 103, 607, 1532
PpsI GAGTC 3 cut(s) 103, 607, 1532
Ppu21I YACGTR 1 cut(s) 1676
PpuMI RGGWCCY 1 cut(s) 411
PshAI GACNNNNGTC 1 cut(s) 1396
Psp5II RGGWCCY 1 cut(s) 411
Psp6I CCWGG 6 cut(s) 553, 838, 1126, 1393, 1501, 1747
PspFI CCCAGC 3 cut(s) 35, 294, 1087
PspGI CCWGG 6 cut(s) 553, 838, 1126, 1393, 1501, 1747
PspN4I GGNNCC 8 cut(s) 34, 366, 412, 447, 1019, 1324, 1638, 1753
PspPI GGNCC 9 cut(s) 32, 411, 445, 1018, 1090, 1151, 1178, 1268, 1391
PspPPI RGGWCCY 1 cut(s) 411
PspXI VCTCGAGB 2 cut(s) 615, 1419
PsuI RGATCY 1 cut(s) 451
PvuII CAGCTG 1 cut(s) 1157
RsaI GTAC 4 cut(s) 316, 1242, 1324, 1794
RsaNI GTAC 4 cut(s) 315, 1241, 1323, 1793
RseI CAYNNNNRTG 5 cut(s) 597, 1068, 1193, 1314, 1386
SapI GCTCTTC 1 cut(s) 1080
SaqAI TTAA 3 cut(s) 519, 1143, 1569
Sau3AI GATC 6 cut(s) 75, 163, 427, 451, 1003, 1670
Sau96I GGNCC 9 cut(s) 32, 411, 445, 1018, 1090, 1151, 1178, 1268, 1391
SchI GAGTC 3 cut(s) 104, 607, 1532
ScrFI CCNGG 6 cut(s) 555, 840, 1128, 1395, 1503, 1749
SduI GDGCHC 4 cut(s) 219, 367, 1075, 1641
SexAI ACCWGGT 1 cut(s) 1747
SfaNI GCATC 7 cut(s) 331, 719, 1004, 1359, 1390, 1502, 1603
Sfr274I CTCGAG 2 cut(s) 615, 1419
SinI GGWCC 5 cut(s) 32, 411, 1151, 1268, 1391
SlaI CTCGAG 2 cut(s) 615, 1419
SmiMI CAYNNNNRTG 5 cut(s) 597, 1068, 1193, 1314, 1386
SmlI CTYRAG 7 cut(s) 218, 567, 615, 1082, 1419, 1602, 1801
SmoI CTYRAG 7 cut(s) 218, 567, 615, 1082, 1419, 1602, 1801
SpeI ACTAGT 1 cut(s) 317
SsiI CCGC 5 cut(s) 193, 778, 787, 1111, 1529
SspI AATATT 1 cut(s) 1441
SspMI CTAG 4 cut(s) 134, 318, 1067, 1347
StyD4I CCNGG 6 cut(s) 553, 838, 1126, 1393, 1501, 1747
StyI CCWWGG 3 cut(s) 851, 900, 1292
TaaI ACNGT 4 cut(s) 70, 110, 398, 636
TaiI ACGT 2 cut(s) 1678, 1969
TaqI TCGA 3 cut(s) 616, 1250, 1420
TauI GCSGC 1 cut(s) 1531
TfiI GAWTC 7 cut(s) 62, 1034, 1252, 1406, 1811, 1818, 1832
Tru1I TTAA 3 cut(s) 519, 1143, 1569
Tru9I TTAA 3 cut(s) 519, 1143, 1569
TscAI CASTG 4 cut(s) 403, 925, 1437, 1495
TseI GCWGC 9 cut(s) 190, 286, 701, 947, 1198, 1415, 1426, 1696, 1898
TspDTI ATGAA 6 cut(s) 36, 297, 591, 1274, 1298, 1644
TspGWI ACGGA 2 cut(s) 1734, 1931
TspRI CASTG 4 cut(s) 403, 925, 1437, 1495
VpaK11BI GGWCC 5 cut(s) 32, 411, 1151, 1268, 1391
XagI CCTNNNNNAGG 2 cut(s) 1012, 1506
XapI RAATTY 4 cut(s) 481, 1023, 1261, 1651
XceI RCATGY 1 cut(s) 1319
XhoI CTCGAG 2 cut(s) 615, 1419
XmnI GAANNNNTTC 3 cut(s) 930, 1038, 1885
XspI CTAG 4 cut(s) 134, 318, 1067, 1347
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.