Rh6AG497600

serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6A
OG0006217
Physical Location & Seq
Reverse (-)
67349002 .. 67355157
6156 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6AG497600.1

Sequence Viewer

Length: 2532 bp
ATGTCGAAGATGAAGCACCTACTGAGAAAGCTCCACATCGGCGGGGACCAGAGGCTGGCCGAGACGACGGCCGCGGTGGCCCCGCCGGTGGTGGCGAGTCCGGGGACGGCGAATCTCAACCCGACAGCGTCGTCACCGGCGTCGTCGTCGTCGGGGTCGGCGACAATGGGGAGAATCGCGGCGCTGGAGTCGGTGAGTGATCGGACGTCTGGCGACGGCGGGGGGAGCGGGAGTGGCGGAGGAGGCGTGGATTTCAATTTCTTGGAGGAGGAGTTTCAGGTACAGTTGGCCCTAGCGATTAGCGCTTCCGATCCCGATTCGCGCGACGACCCTGAGACGGCTCAGATCGACGCCGCGAAACGGATTAGCCTCGGCTGCGGGGCGACGTCGCTCGCCGACGCACAAGCCCCTTTTCAGATACTTTCGCTTCGCTACTGGAGCCATAATGTTGTAGATTATAATGAAAAAGTGGTGGATGGATTTTATGATGTGTATGGAATTACCTCGAATTCATTTAGACAAGGGAAGATGCCATTGTTGGTGGAATTTCGAGCGGTATCGGTTTCAGATAATGTTGACTACGATGTCATATTAGTTAACCGTTTTGTTGATACTGAACTGCAACAACTTGAGAAAAGAGCATATGCTGCATCTCTAGAGTCGGGGATTTCTCAACATGGTCTACTTTTAAGTGGTTTGATTCAGAAGATTGCTGATATTGTTGTTGATAGAATGGGTGGTCCAGTTGGAGATGCGGATGAGATTTTAAGAAGGTGGAAAATAAGGAGGCATGAGTTGCGGAGTTCAATGAACACTATCATTCTTCCCCTCGGAAAAATTGATGTTGGACTTTCACGCCACCGGGCCCTGCTCTTTAAGGTATTAGCTGATAAGATAAATCTTCCATGTATGCTGGTCAAAGGTAGCTACTACACTGGTACTGATGATGGAGCTGTAAACTTGATTAAAATTGATAGTGGAATTGGAAGCGAATATATTATTGATCTGATGGGTGCTCCTGGAACACTAATTCCTGCTGAGGTACCTACTAGTCAGCTCCCAAATTCTTTTTTTGCCATAAGGAGCTTTCAAGATCCCACAGAAATGCCTACAGAGTTGCCCAAAGATCTGTGTTTACTACAAGCTGAGGGAACTGCAATGTCGGCAGCTCCACCTGGTCTTGAAAGAGCTTCCACATTTGGCAGCTCAAGGTCAGAAGAAACATCATATGCAGGTGTTCAAACAAAAGATGACCAAAGAAGCGTCGTGGATGAAAATCAAATTGAGATTCTTAAAAGTGAGCTTGAGACTCCTCTTAAAAGTAAATCATGTGGAAGTTCATCAGGCCCATCTGGGAAAGCTACATCTGCACAAAAAAGAAAAGTGAAAAATGTATCAAGGTATGTCATCAGTGCCGCAAAGAACCCAGAATTTGCACAGAAACTACATGCTGTCTTGTTGGAGAGTGGTGCATCACCTCCTCCCGACTTATTTTCAGATATGAATCCTCAATACCTGAATGAAGGTAAATTGCTTGGACAAATCCATGCAAATGGGGAACTTGTAGATGAGGGGGTTCATGATTATCTGGTTAAACTATTGTCAAGCAGTGATCAATCCTCTGCCGTGGATGTAGCTGAACAACGGAATGAGTGGAGGACCAATGCTTTACTCTCTGATAATGTTGATGAGGGATTTGTAATGGTTTCTGGCAGAACTGGTGAAACAACCCAGATTGGTGCTATAAATTTAGATCCTGCTTTTGGTAATCCCCCAAGAATGAATGCAGAAGCTTTTCATGAGGAGAAAATTCATGATATATCCATGGTCTCTGGAACAACTTCTGCTAACACTCAATTGGGCAAAGAATCTGTTGCTCAATCAACGCAAACAGCCAATAGCAGTCTGAATGCTGCTTGGGATAGTCACGTTGATAGGTACCCAGCGTTGGGAGAAGTTGCGGAGTGGGAAATTCTATGGGAGGATCTTCAGATTGGAGAGCGCATTGGCATTGGTTCATATGGTGAGGTATATCATGCAGATTGGAATGGCACTGAAGTAGCTGTGAAGAAATTTTTAGATCAAGATTTTTCGGGTGATGCATTGGTTCAGTTTAGATGTGAAGTAGAGATCATGTTAAGACTTCGACATCCAAATGTTGTGCTTTTCATGGGCGCTGTTACTCGCCCTCCCCATTTCTCCATCCTGACAGAGTTTCTTCCCAGGGGTAGCTTATACCGATTACTGCATCGTCCAAATTCTCAACTTGATGAAAAGAGGCGAATGAGAATGGCTCTTGATGTGGCGAAGGGAATGAATTACCTCCACACCAGCAATCCTACAGTTGTGCATCGAGACCTTAAGTCTCCAAATCTCCTTGTTGATAAGAATTGGAATGTGAAGGTTTGTGACTTTGGGTTGTCACGTACGAAGCACCACACTTATCTGTCCTCAAAGTCCACTGCTGGAACGGTAATACTAGTTAAGAGTGAATTTTCAAGACAATATCTATCTGTTTATCCCCTCATGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0001666 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004712 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005789 GO:0006082 GO:0006464 GO:0006468 GO:0006629 GO:0006720 GO:0006721 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0008299 GO:0008610 GO:0009058 GO:0009628 GO:0009685 GO:0009686 GO:0009719 GO:0009723 GO:0009725 GO:0009743 GO:0009744 GO:0009746 GO:0009750 GO:0009756 GO:0009966 GO:0009968 GO:0009987 GO:0010033 GO:0010035 GO:0010038 GO:0010039 GO:0010104 GO:0010105 GO:0010182 GO:0010646 GO:0010648 GO:0010817 GO:0012505 GO:0016020 GO:0016053 GO:0016101 GO:0016102 GO:0016114 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0019752 GO:0023051 GO:0023052 GO:0023057 GO:0031984 GO:0034284 GO:0034285 GO:0036211 GO:0036293 GO:0040034 GO:0042175 GO:0042221 GO:0042445 GO:0042446 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044260 GO:0044267 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044444 GO:0044446 GO:0044464 GO:0046394 GO:0046777 GO:0048506 GO:0048509 GO:0048510 GO:0048519 GO:0048523 GO:0048580 GO:0048583 GO:0048585 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051239 GO:0051302 GO:0051716 GO:0065007 GO:0065008 GO:0070297 GO:0070298 GO:0070482 GO:0070887 GO:0071241 GO:0071248 GO:0071281 GO:0071310 GO:0071322 GO:0071704 GO:0098827 GO:0140096 GO:1901564 GO:1901576 GO:1901700 GO:1901701 GO:1902531 GO:1902532 GO:2000026 GO:2000035 GO:2000069 GO:2000280
KEGG Pathways
Metabolic & Signaling
ko04010 map04010
Pfam Domains
Protein Families
EDR1 Pkinase_Tyr

Protein Analysis

843

Amino Acids

91.82

Weight (kDa)

5.5

Isoelectric Point (pI)

39.77

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
EDR1_CTR1_ARMC3_pept PF14381 139 - 344 7.8e-71 EDR1/CTR1/ARMC3, peptidase-like
PK_Tyr_Ser-Thr PF07714 663 - 819 2.5e-37 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 664 - 819 5e-32 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 459
AarI CACCTGC 1 cut(s) 1223
AasI GACNNNNNNGTC 2 cut(s) 130, 584
AatII GACGTC 2 cut(s) 209, 389
Acc36I ACCTGC 1 cut(s) 1223
Acc65I GGTACC 2 cut(s) 1042, 1938
AccB1I GGYRCC 2 cut(s) 1042, 1938
AccB7I CCANNNNNTGG 1 cut(s) 55
AccBSI CCGCTC 2 cut(s) 228, 554
AccI GTMKAC 1 cut(s) 682
AccII CGCG 5 cut(s) 74, 179, 322, 324, 356
AclWI GGATC 4 cut(s) 305, 1088, 1748, 1992
AcoI YGGCCR 2 cut(s) 57, 69
AcuI CTGAAG 2 cut(s) 1973, 2076
AcyI GRCGYC 4 cut(s) 140, 206, 351, 386
AfaI GTAC 5 cut(s) 282, 940, 1044, 1940, 2428
AfeI AGCGCT 1 cut(s) 304
AfiI CCNNNNNNNGG 7 cut(s) 55, 88, 337, 360, 1763, 1948, 1949
AflII CTTAAG 1 cut(s) 2360
AgsI TTSAA 6 cut(s) 256, 807, 1091, 1184, 1241, 2499
AhdI GACNNNNNGTC 1 cut(s) 2362
AhlI ACTAGT 2 cut(s) 1049, 2479
AjnI CCWGG 3 cut(s) 1018, 1174, 2222
AloI GAACNNNNNNTCC 2 cut(s) 1015, 1047
Alw21I GWGCWC 1 cut(s) 1018
Alw26I GTCTC 6 cut(s) 56, 329, 1301, 1834, 2349, 2370
AlwI GGATC 4 cut(s) 305, 1088, 1748, 1992
AlwNI CAGNNNCTG 1 cut(s) 55
Aor51HI AGCGCT 1 cut(s) 304
AoxI GGCC 6 cut(s) 57, 69, 78, 288, 864, 1345
ApaI GGGCCC 1 cut(s) 868
ApeKI GCWGC 5 cut(s) 375, 647, 1166, 1203, 1913
Asp700I GAANNNNTTC 2 cut(s) 1794, 1840
Asp718I GGTACC 2 cut(s) 1042, 1938
AspLEI GCGC 5 cut(s) 184, 305, 324, 2004, 2177
AspS9I GGNCC 8 cut(s) 46, 79, 289, 740, 864, 865, 1346, 1659
AsuC2I CCSGG 2 cut(s) 102, 863
AsuHPI GGTGA 6 cut(s) 126, 205, 1467, 1733, 2036, 2108
AvaII GGWCC 3 cut(s) 46, 740, 1659
BaeGI GKGCMC 1 cut(s) 868
BanI GGYRCC 2 cut(s) 1042, 1938
BanII GRGCYC 1 cut(s) 868
Bbv12I GWGCWC 1 cut(s) 1018
BbvCI CCTCAGC 2 cut(s) 1038, 1146
BbvI GCAGC 5 cut(s) 362, 634, 1178, 1215, 1900
BccI CCATC 5 cut(s) 470, 941, 1003, 1357, 2210
BceAI ACGGC 5 cut(s) 84, 123, 232, 354, 1610
BciT130I CCWGG 3 cut(s) 1020, 1176, 2224
BclI TGATCA 1 cut(s) 1612
BcnI CCSGG 2 cut(s) 102, 863
BcoDI GTCTC 6 cut(s) 56, 329, 1301, 1834, 2349, 2370
BcuI ACTAGT 2 cut(s) 1049, 2479
BfaI CTAG 4 cut(s) 293, 656, 1050, 2480
BfmI CTRYAG 2 cut(s) 1110, 2340
BfoI RGCGCY 3 cut(s) 185, 306, 2178
BfrI CTTAAG 1 cut(s) 2360
BfuAI ACCTGC 1 cut(s) 1223
BglI GCCNNNNNGGC 1 cut(s) 77
BglII AGATCT 1 cut(s) 1126
BisI GCNGC 9 cut(s) 72, 180, 354, 376, 648, 1167, 1204, 1416, 1914
BlsI GCNGC 9 cut(s) 73, 181, 355, 377, 649, 1168, 1205, 1417, 1915
Bme1390I CCNGG 5 cut(s) 102, 863, 1020, 1176, 2224
Bme18I GGWCC 3 cut(s) 46, 740, 1659
BmeRI GACNNNNNGTC 1 cut(s) 2362
BmgT120I GGNCC 8 cut(s) 46, 79, 289, 740, 864, 865, 1346, 1659
BmiI GGNNCC 6 cut(s) 47, 81, 440, 866, 1044, 1940
BmrFI CCNGG 5 cut(s) 102, 863, 1020, 1176, 2224
BmsI GCATC 7 cut(s) 519, 659, 742, 1481, 2089, 2257, 2359
BplI GAGNNNNNCTC 2 cut(s) 2278, 2310
BpmI CTGGAG 2 cut(s) 206, 457
Bpu10I CCTNAGC 2 cut(s) 1038, 1146
BpuEI CTTGAG 3 cut(s) 650, 1192, 1325
BpuMI CCSGG 2 cut(s) 102, 863
BsaAI YACGTR 1 cut(s) 2426
BsaBI GATNNNNATC 2 cut(s) 1275, 1503
BsaHI GRCGYC 4 cut(s) 140, 206, 351, 386
BsaI GGTCTC 2 cut(s) 1834, 2349
BsaJI CCNNGG 8 cut(s) 72, 101, 370, 829, 1626, 1824, 2222, 2223
BsaXI ACNNNNNCTCC 8 cut(s) 217, 231, 247, 257, 261, 287, 2173, 2203
Bsc4I CCNNNNNNNGG 7 cut(s) 55, 88, 337, 360, 1763, 1948, 1949
Bse118I RCCGGY 2 cut(s) 85, 136
Bse1I ACTGG 4 cut(s) 440, 743, 940, 1723
Bse3DI GCAATG 1 cut(s) 1164
Bse8I GATNNNNATC 2 cut(s) 1275, 1503
BseBI CCWGG 3 cut(s) 1020, 1176, 2224
BseDI CCNNGG 8 cut(s) 72, 101, 370, 829, 1626, 1824, 2222, 2223
BseGI GGATG 6 cut(s) 481, 763, 1276, 1636, 2149, 2202
BseJI GATNNNNATC 2 cut(s) 1275, 1503
BseLI CCNNNNNNNGG 7 cut(s) 55, 88, 337, 360, 1763, 1948, 1949
BseMI GCAATG 1 cut(s) 1164
BseMII CTCAG 5 cut(s) 14, 324, 356, 1029, 1137
BseNI ACTGG 4 cut(s) 440, 743, 940, 1723
BseRI GAGGAG 6 cut(s) 255, 281, 284, 1302, 1470, 1817
BseSI GKGCMC 1 cut(s) 868
BseX3I CGGCCG 1 cut(s) 69
BseXI GCAGC 5 cut(s) 362, 634, 1178, 1215, 1900
BseYI CCCAGC 1 cut(s) 1942
BsgI GTGCAG 1 cut(s) 1353
Bsh1236I CGCG 5 cut(s) 74, 179, 322, 324, 356
Bsh1285I CGRYCG 1 cut(s) 72
BshFI GGCC 6 cut(s) 59, 71, 80, 290, 866, 1347
BshNI GGYRCC 2 cut(s) 1042, 1938
BsiEI CGRYCG 1 cut(s) 72
BsiHKAI GWGCWC 1 cut(s) 1018
BsiSI CCGG 4 cut(s) 86, 101, 137, 862
BsiWI CGTACG 1 cut(s) 2426
BslFI GGGAC 2 cut(s) 59, 118
BslI CCNNNNNNNGG 7 cut(s) 55, 88, 337, 360, 1763, 1948, 1949
BsmAI GTCTC 6 cut(s) 56, 329, 1301, 1834, 2349, 2370
BsmBI CGTCTC 2 cut(s) 56, 329
BsmFI GGGAC 2 cut(s) 59, 118
BsmI GAATGC 2 cut(s) 1789, 1915
BsnI GGCC 6 cut(s) 59, 71, 80, 290, 866, 1347
Bso31I GGTCTC 2 cut(s) 1834, 2349
Bsp120I GGGCCC 1 cut(s) 864
Bsp1286I GDGCHC 2 cut(s) 868, 1018
Bsp19I CCATGG 1 cut(s) 1824
BspANI GGCC 6 cut(s) 59, 71, 80, 290, 866, 1347
BspCNI CTCAG 5 cut(s) 15, 325, 355, 1030, 1138
BspFNI CGCG 5 cut(s) 74, 179, 322, 324, 356
BspHI TCATGA 3 cut(s) 1579, 1798, 1813
BspLI GGNNCC 6 cut(s) 47, 81, 440, 866, 1044, 1940
BspMI ACCTGC 1 cut(s) 1223
BspPI GGATC 4 cut(s) 305, 1088, 1748, 1992
BspT107I GGYRCC 2 cut(s) 1042, 1938
BspTI CTTAAG 1 cut(s) 2360
BspTNI GGTCTC 2 cut(s) 1834, 2349
BsrBI CCGCTC 2 cut(s) 228, 554
BsrDI GCAATG 1 cut(s) 1164
BsrFI RCCGGY 2 cut(s) 85, 136
BsrI ACTGG 4 cut(s) 440, 743, 940, 1723
BssAI RCCGGY 2 cut(s) 85, 136
BssECI CCNNGG 8 cut(s) 72, 101, 370, 829, 1626, 1824, 2222, 2223
BssNI GRCGYC 4 cut(s) 140, 206, 351, 386
BssT1I CCWWGG 1 cut(s) 1824
Bst2UI CCWGG 3 cut(s) 1020, 1176, 2224
Bst4CI ACNGT 4 cut(s) 285, 602, 2344, 2473
BstACI GRCGYC 4 cut(s) 140, 206, 351, 386
BstAFI CTTAAG 1 cut(s) 2360
BstAPI GCANNNNNTGC 2 cut(s) 647, 796
BstBAI YACGTR 1 cut(s) 2426
BstC8I GCNNGC 2 cut(s) 57, 393
BstDEI CTNAG 5 cut(s) 23, 333, 342, 1038, 1146
BstDSI CCRYGG 3 cut(s) 72, 1626, 1824
BstF5I GGATG 6 cut(s) 481, 763, 1276, 1636, 2149, 2202
BstFNI CGCG 5 cut(s) 74, 179, 322, 324, 356
BstH2I RGCGCY 3 cut(s) 185, 306, 2178
BstHHI GCGC 5 cut(s) 184, 305, 324, 2004, 2177
BstMAI GTCTC 6 cut(s) 56, 329, 1301, 1834, 2349, 2370
BstMCI CGRYCG 1 cut(s) 72
BstNI CCWGG 3 cut(s) 1020, 1176, 2224
BstNSI RCATGY 1 cut(s) 1451
BstSCI CCNGG 5 cut(s) 100, 861, 1018, 1174, 2222
BstSFI CTRYAG 2 cut(s) 1110, 2340
BstSLI GKGCMC 1 cut(s) 868
BstUI CGCG 5 cut(s) 74, 179, 322, 324, 356
BstV1I GCAGC 5 cut(s) 362, 634, 1178, 1215, 1900
BstX2I RGATCY 4 cut(s) 1093, 1126, 1753, 1984
BstXI CCANNNNNNTGG 1 cut(s) 1553
BstYI RGATCY 4 cut(s) 1093, 1126, 1753, 1984
BstZI CGGCCG 1 cut(s) 69
BsuRI GGCC 6 cut(s) 59, 71, 80, 290, 866, 1347
BtgI CCRYGG 3 cut(s) 72, 1626, 1824
BtsCI GGATG 6 cut(s) 481, 763, 1276, 1636, 2149, 2202
BtsI GCAGTG 2 cut(s) 1615, 2460
BtsIMutI CAGTG 5 cut(s) 933, 1417, 1615, 2052, 2460
BveI ACCTGC 1 cut(s) 1223
Cac8I GCNNGC 2 cut(s) 57, 393
CaiI CAGNNNCTG 1 cut(s) 55
CciI TCATGA 3 cut(s) 1579, 1798, 1813
CfoI GCGC 5 cut(s) 184, 305, 324, 2004, 2177
Cfr10I RCCGGY 2 cut(s) 85, 136
Cfr13I GGNCC 8 cut(s) 46, 79, 289, 740, 864, 865, 1346, 1659
Cfr42I CCGCGG 1 cut(s) 75
CseI GACGC 5 cut(s) 117, 129, 359, 407, 1252
CsiI ACCWGGT 1 cut(s) 1174
Csp6I GTAC 5 cut(s) 281, 939, 1043, 1939, 2427
CviQI GTAC 5 cut(s) 281, 939, 1043, 1939, 2427
DdeI CTNAG 5 cut(s) 23, 333, 342, 1038, 1146
DrdI GACNNNNNNGTC 2 cut(s) 130, 584
DriI GACNNNNNGTC 1 cut(s) 2362
DseDI GACNNNNNNGTC 2 cut(s) 130, 584
EaeI YGGCCR 2 cut(s) 57, 69
EagI CGGCCG 1 cut(s) 69
Eam1105I GACNNNNNGTC 1 cut(s) 2362
EciI GGCGGA 1 cut(s) 252
EclXI CGGCCG 1 cut(s) 69
Eco130I CCWWGG 1 cut(s) 1824
Eco24I GRGCYC 1 cut(s) 868
Eco31I GGTCTC 2 cut(s) 1834, 2349
Eco47I GGWCC 3 cut(s) 46, 740, 1659
Eco47III AGCGCT 1 cut(s) 304
Eco52I CGGCCG 1 cut(s) 69
Eco57I CTGAAG 2 cut(s) 1973, 2076
EcoO109I RGGNCCY 1 cut(s) 865
EcoRI GAATTC 1 cut(s) 508
EcoRII CCWGG 3 cut(s) 1018, 1174, 2222
EcoT14I CCWWGG 1 cut(s) 1824
EcoT22I ATGCAT 1 cut(s) 2104
EcoT38I GRGCYC 1 cut(s) 868
ErhI CCWWGG 1 cut(s) 1824
Esp3I CGTCTC 2 cut(s) 56, 329
FaqI GGGAC 2 cut(s) 59, 118
FauI CCCGC 5 cut(s) 35, 90, 212, 221, 371
FauNDI CATATG 3 cut(s) 643, 1228, 2020
FbaI TGATCA 1 cut(s) 1612
FblI GTMKAC 1 cut(s) 682
Fnu4HI GCNGC 9 cut(s) 72, 180, 354, 376, 648, 1167, 1204, 1416, 1914
FokI GGATG 6 cut(s) 488, 770, 1283, 1643, 2136, 2189
FriOI GRGCYC 1 cut(s) 868
Fsp4HI GCNGC 9 cut(s) 72, 180, 354, 376, 648, 1167, 1204, 1416, 1914
FspBI CTAG 4 cut(s) 293, 656, 1050, 2480
GlaI GCGC 5 cut(s) 183, 304, 323, 2003, 2176
GluI GCNGC 9 cut(s) 72, 180, 354, 376, 648, 1167, 1204, 1416, 1914
GsaI CCCAGC 1 cut(s) 1946
GsuI CTGGAG 2 cut(s) 206, 457
HaeII RGCGCY 3 cut(s) 185, 306, 2178
HaeIII GGCC 6 cut(s) 59, 71, 80, 290, 866, 1347
HapII CCGG 4 cut(s) 86, 101, 137, 862
HgaI GACGC 5 cut(s) 117, 129, 359, 407, 1252
HhaI GCGC 5 cut(s) 184, 305, 324, 2004, 2177
Hin1I GRCGYC 4 cut(s) 140, 206, 351, 386
Hin6I GCGC 5 cut(s) 182, 303, 322, 2002, 2175
HinP1I GCGC 5 cut(s) 182, 303, 322, 2002, 2175
HincII GTYRAC 2 cut(s) 577, 598
HindII GTYRAC 2 cut(s) 577, 598
HindIII AAGCTT 1 cut(s) 1791
HpaI GTTAAC 1 cut(s) 598
HpaII CCGG 4 cut(s) 86, 101, 137, 862
HphI GGTGA 6 cut(s) 126, 205, 1467, 1733, 2036, 2108
Hpy166II GTNNAC 6 cut(s) 577, 598, 683, 958, 1136, 2460
Hpy8I GTNNAC 6 cut(s) 577, 598, 683, 958, 1136, 2460
HpyAV CCTTC 4 cut(s) 765, 1517, 2302, 2395
HpyCH4III ACNGT 4 cut(s) 285, 602, 2344, 2473
HpyCH4IV ACGT 4 cut(s) 206, 386, 1929, 2425
HpyF3I CTNAG 5 cut(s) 23, 333, 342, 1038, 1146
HpySE526I ACGT 4 cut(s) 206, 386, 1929, 2425
Hsp92I GRCGYC 4 cut(s) 140, 206, 351, 386
HspAI GCGC 5 cut(s) 182, 303, 322, 2002, 2175
KpnI GGTACC 2 cut(s) 1046, 1942
Ksp22I TGATCA 1 cut(s) 1612
KspAI GTTAAC 1 cut(s) 598
KspI CCGCGG 1 cut(s) 75
LmnI GCTCC 8 cut(s) 36, 225, 438, 950, 1021, 1062, 1083, 1174
Lsp1109I GCAGC 5 cut(s) 362, 634, 1178, 1215, 1900
LweI GCATC 7 cut(s) 519, 659, 742, 1481, 2089, 2257, 2359
MabI ACCWGGT 1 cut(s) 1174
MaeI CTAG 4 cut(s) 293, 656, 1050, 2480
MaeII ACGT 4 cut(s) 206, 386, 1929, 2425
MaeIII GTNAC 5 cut(s) 132, 1925, 2179, 2408, 2421
MbiI CCGCTC 2 cut(s) 228, 554
MboII GAAGA 9 cut(s) 19, 538, 718, 815, 893, 1229, 1979, 2080, 2210
MfeI CAATTG 1 cut(s) 1856
MflI RGATCY 4 cut(s) 1093, 1126, 1753, 1984
MhlI GDGCHC 2 cut(s) 868, 1018
MlyI GAGTC 4 cut(s) 106, 197, 668, 1303
MmeI TCCRAC 3 cut(s) 727, 826, 1440
Mph1103I ATGCAT 1 cut(s) 2104
MroXI GAANNNNTTC 2 cut(s) 1794, 1840
MslI CAYNNNNRTG 3 cut(s) 1103, 1551, 2154
MspA1I CMGCKG 1 cut(s) 74
MspCI CTTAAG 1 cut(s) 2360
MspI CCGG 4 cut(s) 86, 101, 137, 862
MspR9I CCNGG 5 cut(s) 102, 863, 1020, 1176, 2224
MunI CAATTG 1 cut(s) 1856
Mva1269I GAATGC 2 cut(s) 1789, 1915
MvaI CCWGG 3 cut(s) 1020, 1176, 2224
MvnI CGCG 5 cut(s) 74, 179, 322, 324, 356
NciI CCSGG 2 cut(s) 102, 863
NcoI CCATGG 1 cut(s) 1824
NdeI CATATG 3 cut(s) 643, 1228, 2020
NlaIV GGNNCC 6 cut(s) 47, 81, 440, 866, 1044, 1940
NmeAIII GCCGAG 2 cut(s) 85, 351
NmuCI GTSAC 4 cut(s) 132, 1925, 2408, 2421
NsiI ATGCAT 1 cut(s) 2104
NspI RCATGY 1 cut(s) 1451
PagI TCATGA 3 cut(s) 1579, 1798, 1813
PaqCI CACCTGC 1 cut(s) 1223
PasI CCCWGGG 1 cut(s) 2223
PcsI WCGNNNNNNNCGW 2 cut(s) 137, 158
PctI GAATGC 2 cut(s) 1789, 1915
PdmI GAANNNNTTC 2 cut(s) 1794, 1840
PfeI GAWTC 7 cut(s) 112, 174, 317, 700, 1288, 1504, 1868
Pfl23II CGTACG 1 cut(s) 2426
PflFI GACNNNGTC 1 cut(s) 127
PflMI CCANNNNNTGG 1 cut(s) 55
PfoI TCCNGGA 1 cut(s) 1018
PkrI GCNGC 9 cut(s) 73, 181, 355, 377, 649, 1168, 1205, 1417, 1915
PleI GAGTC 4 cut(s) 105, 196, 667, 1303
PpsI GAGTC 4 cut(s) 105, 196, 667, 1303
Ppu21I YACGTR 1 cut(s) 2426
PsiI TTATAA 1 cut(s) 459
Psp6I CCWGG 3 cut(s) 1018, 1174, 2222
PspFI CCCAGC 1 cut(s) 1942
PspGI CCWGG 3 cut(s) 1018, 1174, 2222
PspLI CGTACG 1 cut(s) 2426
PspN4I GGNNCC 6 cut(s) 47, 81, 440, 866, 1044, 1940
PspOMI GGGCCC 1 cut(s) 864
PspPI GGNCC 8 cut(s) 46, 79, 289, 740, 864, 865, 1346, 1659
PstNI CAGNNNCTG 1 cut(s) 55
PsuI RGATCY 4 cut(s) 1093, 1126, 1753, 1984
PsyI GACNNNGTC 1 cut(s) 127
RsaI GTAC 5 cut(s) 282, 940, 1044, 1940, 2428
RsaNI GTAC 5 cut(s) 281, 939, 1043, 1939, 2427
RseI CAYNNNNRTG 3 cut(s) 1103, 1551, 2154
SacII CCGCGG 1 cut(s) 75
SatI GCNGC 9 cut(s) 72, 180, 354, 376, 648, 1167, 1204, 1416, 1914
Sau96I GGNCC 8 cut(s) 46, 79, 289, 740, 864, 865, 1346, 1659
SchI GAGTC 4 cut(s) 106, 197, 668, 1303
ScrFI CCNGG 5 cut(s) 102, 863, 1020, 1176, 2224
SduI GDGCHC 2 cut(s) 868, 1018
SexAI ACCWGGT 1 cut(s) 1174
SfaNI GCATC 7 cut(s) 519, 659, 742, 1481, 2089, 2257, 2359
SfcI CTRYAG 2 cut(s) 1110, 2340
SfiI GGCCNNNNNGGCC 1 cut(s) 77
Sfr303I CCGCGG 1 cut(s) 75
SgrAI CRCCGGYG 2 cut(s) 85, 136
SgrBI CCGCGG 1 cut(s) 75
SinI GGWCC 3 cut(s) 46, 740, 1659
SmiMI CAYNNNNRTG 3 cut(s) 1103, 1551, 2154
SmlI CTYRAG 4 cut(s) 629, 1207, 1304, 2360
SmoI CTYRAG 4 cut(s) 629, 1207, 1304, 2360
SpeI ACTAGT 2 cut(s) 1049, 2479
SspMI CTAG 4 cut(s) 293, 656, 1050, 2480
StyD4I CCNGG 5 cut(s) 100, 861, 1018, 1174, 2222
StyI CCWWGG 1 cut(s) 1824
TaaI ACNGT 4 cut(s) 285, 602, 2344, 2473
TaiI ACGT 4 cut(s) 209, 389, 1932, 2428
TaqI TCGA 6 cut(s) 5, 348, 506, 550, 2146, 2353
TauI GCSGC 4 cut(s) 74, 182, 356, 1418
TfiI GAWTC 7 cut(s) 112, 174, 317, 700, 1288, 1504, 1868
TscAI CASTG 5 cut(s) 940, 1417, 1615, 2059, 2467
TseFI GTSAC 4 cut(s) 132, 1925, 2408, 2421
TseI GCWGC 5 cut(s) 375, 647, 1166, 1203, 1913
Tsp45I GTSAC 4 cut(s) 132, 1925, 2408, 2421
TspGWI ACGGA 2 cut(s) 376, 1660
TspRI CASTG 5 cut(s) 940, 1417, 1615, 2059, 2467
Tth111I GACNNNGTC 1 cut(s) 127
Van91I CCANNNNNTGG 1 cut(s) 55
Vha464I CTTAAG 1 cut(s) 2360
VpaK11BI GGWCC 3 cut(s) 46, 740, 1659
XbaI TCTAGA 1 cut(s) 655
XceI RCATGY 1 cut(s) 1451
XmiI GTMKAC 1 cut(s) 682
XmnI GAANNNNTTC 2 cut(s) 1794, 1840
XspI CTAG 4 cut(s) 293, 656, 1050, 2480
ZraI GACGTC 2 cut(s) 207, 387
Zsp2I ATGCAT 1 cut(s) 2104
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.