Rh6CG513700

serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6C
OG0006217
Physical Location & Seq
Reverse (-)
67209110 .. 67214308
5199 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6CG513700.1

Sequence Viewer

Length: 2805 bp
ATGTCGAAGATGAAGCACCTACTGAGAAAGCTTCACATCGGCGGTGACCAGAGGCTGGCGGAGACGACGGCCGCGGTGGCCCCGCCGGTGGTGGCGAGTCCGGGGACGGCGAATCTCAACCCGACGGCGTCGTCACCGGCGTCGTCGTCGTCGGGGTCGGCGACAATGGGAAGAATCACGGCGGTGGAGTCGGTGAGTGATCGGACGTCTGGCGACGGCGGGGGGAGCGGGAGTGGCGGAGGAGGCGTGGATTTCAATTTCTTGGAGGAGGAGTTTCAGGTACAGTTGGCCCTAGCGATTAGCGCTTCCGATCCCGATTCGCGCGACGACCCCGAGACGGCTCAGATCGACGCCGCGAAACGGATTAGCCTCGGCTGCGCGGCGACGTCGCTCGCCGACGCACAAGCCCCTTTTCAGATGCTTTCGCTTCGCTACTGGAGCCATAATGTTGTAGATTATAATGAAAAAGTGGTGGATGGATTTTACGATGTGTATGGAATTACCTCGAATTCATTTAGACAAGGGAAGATGCCATTGTTGGTGGAATTTCGAGCGGTATCGGTTTCAGATAATGTCGACTACGATGTCATATTAGTTAACCGTTTTGTTGATACTGAACTGCAACAACTCGAGAAAAGAGCATATGCTGCATCTCTAGAGTCGGGGATTTCTCAACATGGTCTACTTTTAAGTGGCTTGATTCAGAAGATTGCTGATATTGTTGTTGATAGAATGGGTGGTCCAGTTGGAGATGCGGATGAGATTTTAAGAAGGTGGAAAATAAGGAGGCATGAGTTGCGGAGTTCAATGAACACTATCATTCTTCCCCTCGGAAAAATTGATGTTGGACTTTCACGCCACCGGGCCCTGCTCTTTAAGGTATTAGCTGATAAGATAAATCTTCCATGTATGCTGGTCAAAGGTAGCTACTACACTGGTACTGATGATGGAGCTGTAAACTTGATTAAAATTGATAGTGGAATTGGAAGCGAATATATTATTGATTTGATGGGTGCTCCTGGAACACTAATTCCTGCTGAGGTACCTACTAGTCAGCTCCCAAATTCTTTTTTTGCCATAAGGAGCTTTCAAGATCCCACAGAAATGCCTACAGAGTTGCCCAAAGATCTGTGTTTACTACAAGCTGAGGGAACTGGAATGTCGGCAGCTCCACCTGGTCTTGAAAGAGCTTCCACATTTGGCAGCTCAAGGTCAGAAGAAGCATCATATGCAGGTGTTCAAACAAAAGATGACCAAAGAAGCGTCGTAGATGAAAATCAAATTGAGATTCTTAAAAGTGAGCTTGAGACTCCTCTTAAAAGTAAATCATGTGGAAGTTCATCAGGCCCATCTGGGAAAGCTACATCTGCACAAAAAAGAAAAGTGAAAAATGTATCAAGGTATGTCATCAGTGCCGCAAAGAACCCAGAATTTGCACAGAAACTACATGCTGTCTTGTTGGAGAGCGGTGCATCACCTCCTCCCGACTTATTTTCAGATATGAATCCTCAATACCTGAATGAAGGTAAATTGCTTGGACAAATCCATGCAAATGGGGAACTTGTAGATGAGGGGGTGGTTCATGATTATCTGGTTAAACTATTGTCAAGCAGTGATCAATCCTCTGCCGTGGATGTAGCTGAGCAACGGAATGAGTGGAGGACCAATTCTTTACTCTCTGATAATGTTGATGAGGGATTTGTAATGGTTTCTGGCAGAACTAGTGAAACAACCCAGTTTGGTGCTATAAATTTAGATCCTGCTTTTGGTAATCCCCCAAGAATGAATGCAGAAGCTTTTCATGAGGAGAAAATTCATGATATATCTATGGTCTCTGGAACAACTTCTGCTAACACTCAATTGGGCAAAGAATCTGTTGCTCAATCAACGCAAACAGCCAATAGCAGCCTGAATGCTGCTTGGGATAGTCACGTTGATAGGTACCCAGCGTTGGGAGAAGTTGCGGAGTGGGAAATTCTATGGGAGGATCTTCAGATTGGAGAGCGCATTGGCATTGGTTCATATGGTGAGGTATATCATGCAGATTGGAATGGCACTGAAGTAGCTGTGAAGAAATTTTTAGATCAAGATTTTTCGGGTGATGCATTGGTTCAGTTTAGATGTGAAGTAGAGATCATGTTAAGACTTCGACATCCAAATGTTGTGCTTTTCATGGGCGCTGTTACTCGCCCTCCCCATTTCTCCATCCTGACAGAGTTTCTTCCCAGGGGTAGCTTATACCGATTACTGCATCGTCCAAATTCTCAACTTGATGAAAAGAGGCGAATGCGAATGGCTCTTGATGTGGCGAAGGGAATGAATTACCTCCACACCAGCAATCCTACAGTTGTGCATCGAGACCTTAAGTCTCCAAATCTCCTTGTTGATAAGAATTGGAATGTGAAGGTTTGTGACTTTGGGTTGTCACGTACGAAGCACCACACTTATCTGTCCTCAAAGTCCACTGCTGGAACGCCGGAATGGATGGCACCGGAAGTTTTAAGGAATGAATTAGCTAACGAGAAGTGTGATGTGTACAGTTTTGGTGTGATATTATGGGAATTGACTACTTGCTGTATCCCATGGAAAGGATTGAACCCAATGCAGGTTGTTGGAGCTGTTGGATTCCAAAATAGGCGTCTTGAAATTCCGGATGACGTTGACCCAGTGGTTGCCGAGATAATACGTGATTGTTGGCAAACAGAGCCAAATCTACGGCCTTCTTTCTCCCAGCTCATGGTCCGACTCAAGCGTCTTCAACGGCTTGTTGGAAGAACGAACTCTGCAAATCAAATGACTCGATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0001666 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004712 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005789 GO:0006082 GO:0006464 GO:0006468 GO:0006629 GO:0006720 GO:0006721 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0008299 GO:0008610 GO:0009058 GO:0009628 GO:0009685 GO:0009686 GO:0009719 GO:0009723 GO:0009725 GO:0009743 GO:0009744 GO:0009746 GO:0009750 GO:0009756 GO:0009966 GO:0009968 GO:0009987 GO:0010033 GO:0010035 GO:0010038 GO:0010039 GO:0010104 GO:0010105 GO:0010182 GO:0010646 GO:0010648 GO:0010817 GO:0012505 GO:0016020 GO:0016053 GO:0016101 GO:0016102 GO:0016114 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0019752 GO:0023051 GO:0023052 GO:0023057 GO:0031984 GO:0034284 GO:0034285 GO:0036211 GO:0036293 GO:0040034 GO:0042175 GO:0042221 GO:0042445 GO:0042446 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044260 GO:0044267 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044444 GO:0044446 GO:0044464 GO:0046394 GO:0046777 GO:0048506 GO:0048509 GO:0048510 GO:0048519 GO:0048523 GO:0048580 GO:0048583 GO:0048585 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051239 GO:0051302 GO:0051716 GO:0065007 GO:0065008 GO:0070297 GO:0070298 GO:0070482 GO:0070887 GO:0071241 GO:0071248 GO:0071281 GO:0071310 GO:0071322 GO:0071704 GO:0098827 GO:0140096 GO:1901564 GO:1901576 GO:1901700 GO:1901701 GO:1902531 GO:1902532 GO:2000026 GO:2000035 GO:2000069 GO:2000280
KEGG Pathways
Metabolic & Signaling
ko04010 map04010
Pfam Domains
Protein Families
EDR1 Pkinase_Tyr

Protein Analysis

934

Amino Acids

102.33

Weight (kDa)

5.49

Isoelectric Point (pI)

39.92

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
EDR1_CTR1_ARMC3_pept PF14381 139 - 344 6.5e-71 EDR1/CTR1/ARMC3, peptidase-like
PK_Tyr_Ser-Thr PF07714 664 - 915 4.6e-66 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 665 - 913 2e-51 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 459
AarI CACCTGC 1 cut(s) 1223
AasI GACNNNNNNGTC 3 cut(s) 130, 584, 2751
AatII GACGTC 2 cut(s) 209, 389
Acc36I ACCTGC 2 cut(s) 1223, 2596
Acc65I GGTACC 2 cut(s) 1042, 1941
AccB1I GGYRCC 3 cut(s) 1042, 1941, 2488
AccB7I CCANNNNNTGG 2 cut(s) 55, 2737
AccBSI CCGCTC 3 cut(s) 228, 554, 1467
AccI GTMKAC 2 cut(s) 576, 682
AccII CGCG 5 cut(s) 74, 322, 324, 356, 380
AccIII TCCGGA 1 cut(s) 2650
AclWI GGATC 4 cut(s) 305, 1088, 1751, 1995
AcoI YGGCCR 1 cut(s) 69
AcuI CTGAAG 2 cut(s) 1976, 2079
AcyI GRCGYC 6 cut(s) 128, 140, 206, 351, 386, 2638
AfaI GTAC 6 cut(s) 282, 940, 1044, 1943, 2431, 2537
AfeI AGCGCT 1 cut(s) 304
AflII CTTAAG 1 cut(s) 2363
AgsI TTSAA 8 cut(s) 256, 807, 1091, 1184, 1241, 2596, 2645, 2759
AhdI GACNNNNNGTC 1 cut(s) 2365
AhlI ACTAGT 2 cut(s) 1049, 1721
AjnI CCWGG 3 cut(s) 1018, 1174, 2225
AleI CACNNNNGTG 1 cut(s) 182
AloI GAACNNNNNNTCC 2 cut(s) 1015, 1047
Alw21I GWGCWC 1 cut(s) 1018
Alw26I GTCTC 6 cut(s) 56, 329, 1301, 1837, 2352, 2373
AlwI GGATC 4 cut(s) 305, 1088, 1751, 1995
AlwNI CAGNNNCTG 1 cut(s) 55
Ama87I CYCGRG 2 cut(s) 332, 629
Aor13HI TCCGGA 1 cut(s) 2650
Aor51HI AGCGCT 1 cut(s) 304
AoxI GGCC 6 cut(s) 69, 78, 288, 864, 1345, 2717
ApaI GGGCCC 1 cut(s) 868
ApeKI GCWGC 6 cut(s) 375, 647, 1166, 1203, 1905, 1916
ArsI GACNNNNNNTTYG 2 cut(s) 2623, 2655
Asp700I GAANNNNTTC 2 cut(s) 1797, 1843
Asp718I GGTACC 2 cut(s) 1042, 1941
AspLEI GCGC 5 cut(s) 305, 324, 380, 2007, 2180
AspS9I GGNCC 8 cut(s) 79, 289, 740, 864, 865, 1346, 1662, 2740
AsuC2I CCSGG 2 cut(s) 102, 863
AsuHPI GGTGA 6 cut(s) 56, 126, 205, 1467, 2039, 2111
AvaI CYCGRG 2 cut(s) 332, 629
AvaII GGWCC 3 cut(s) 740, 1662, 2740
BaeGI GKGCMC 1 cut(s) 868
BanI GGYRCC 3 cut(s) 1042, 1941, 2488
BanII GRGCYC 1 cut(s) 868
BbsI GAAGAC 1 cut(s) 2747
Bbv12I GWGCWC 1 cut(s) 1018
BbvCI CCTCAGC 2 cut(s) 1038, 1146
BbvI GCAGC 6 cut(s) 362, 634, 1178, 1215, 1903, 1917
BccI CCATC 6 cut(s) 470, 941, 1003, 1357, 2213, 2479
BceAI ACGGC 9 cut(s) 84, 123, 141, 195, 232, 354, 1613, 2732, 2777
BciT130I CCWGG 3 cut(s) 1020, 1176, 2227
BciVI GTATCC 1 cut(s) 2588
BclI TGATCA 1 cut(s) 1615
BcnI CCSGG 2 cut(s) 102, 863
BcoDI GTCTC 6 cut(s) 56, 329, 1301, 1837, 2352, 2373
BcuI ACTAGT 2 cut(s) 1049, 1721
BfaI CTAG 4 cut(s) 293, 656, 1050, 1722
BfmI CTRYAG 2 cut(s) 1110, 2343
BfoI RGCGCY 2 cut(s) 306, 2181
BfrI CTTAAG 1 cut(s) 2363
BfuAI ACCTGC 2 cut(s) 1223, 2596
BfuI GTATCC 1 cut(s) 2588
BglI GCCNNNNNGGC 1 cut(s) 77
BglII AGATCT 1 cut(s) 1126
BlpI GCTNAGC 1 cut(s) 1641
Bme1390I CCNGG 5 cut(s) 102, 863, 1020, 1176, 2227
Bme18I GGWCC 3 cut(s) 740, 1662, 2740
BmeRI GACNNNNNGTC 1 cut(s) 2365
BmeT110I CYCGRG 2 cut(s) 332, 629
BmgT120I GGNCC 8 cut(s) 79, 289, 740, 864, 865, 1346, 1662, 2740
BmiI GGNNCC 6 cut(s) 81, 440, 866, 1044, 1943, 2490
BmrFI CCNGG 5 cut(s) 102, 863, 1020, 1176, 2227
BmrI ACTGGG 2 cut(s) 1729, 2660
BmsI GCATC 9 cut(s) 408, 519, 659, 742, 1232, 1481, 2092, 2260, 2362
BmuI ACTGGG 2 cut(s) 1729, 2660
BpiI GAAGAC 1 cut(s) 2747
BpmI CTGGAG 1 cut(s) 457
Bpu10I CCTNAGC 2 cut(s) 1038, 1146
Bpu1102I GCTNAGC 1 cut(s) 1641
BpuEI CTTGAG 3 cut(s) 1192, 1325, 2732
BpuMI CCSGG 2 cut(s) 102, 863
BsaAI YACGTR 2 cut(s) 2429, 2687
BsaBI GATNNNNATC 2 cut(s) 1275, 1503
BsaHI GRCGYC 6 cut(s) 128, 140, 206, 351, 386, 2638
BsaI GGTCTC 2 cut(s) 1837, 2352
BsaJI CCNNGG 8 cut(s) 72, 101, 370, 829, 1629, 2225, 2226, 2582
BsaWI WCCGGW 2 cut(s) 2491, 2650
BsaXI ACNNNNNCTCC 8 cut(s) 217, 231, 247, 257, 261, 287, 2176, 2206
Bse118I RCCGGY 2 cut(s) 85, 136
Bse1I ACTGG 6 cut(s) 440, 743, 940, 1159, 1735, 2666
Bse8I GATNNNNATC 2 cut(s) 1275, 1503
BseAI TCCGGA 1 cut(s) 2650
BseBI CCWGG 3 cut(s) 1020, 1176, 2227
BseDI CCNNGG 8 cut(s) 72, 101, 370, 829, 1629, 2225, 2226, 2582
BseGI GGATG 7 cut(s) 481, 763, 1639, 2152, 2205, 2490, 2659
BseJI GATNNNNATC 2 cut(s) 1275, 1503
BseMII CTCAG 5 cut(s) 14, 356, 1029, 1137, 1632
BseNI ACTGG 6 cut(s) 440, 743, 940, 1159, 1735, 2666
BseRI GAGGAG 6 cut(s) 255, 281, 284, 1302, 1470, 1820
BseSI GKGCMC 1 cut(s) 868
BseX3I CGGCCG 1 cut(s) 69
BseXI GCAGC 6 cut(s) 362, 634, 1178, 1215, 1903, 1917
BseYI CCCAGC 2 cut(s) 1945, 2730
BsgI GTGCAG 1 cut(s) 1353
Bsh1236I CGCG 5 cut(s) 74, 322, 324, 356, 380
Bsh1285I CGRYCG 1 cut(s) 72
BshFI GGCC 6 cut(s) 71, 80, 290, 866, 1347, 2719
BshNI GGYRCC 3 cut(s) 1042, 1941, 2488
BsiEI CGRYCG 1 cut(s) 72
BsiHKAI GWGCWC 1 cut(s) 1018
BsiHKCI CYCGRG 2 cut(s) 332, 629
BsiSI CCGG 7 cut(s) 86, 101, 137, 862, 2477, 2492, 2651
BsiWI CGTACG 1 cut(s) 2429
BslFI GGGAC 1 cut(s) 118
BsmAI GTCTC 6 cut(s) 56, 329, 1301, 1837, 2352, 2373
BsmBI CGTCTC 2 cut(s) 56, 329
BsmFI GGGAC 1 cut(s) 118
BsmI GAATGC 3 cut(s) 1792, 1918, 2292
BsnI GGCC 6 cut(s) 71, 80, 290, 866, 1347, 2719
Bso31I GGTCTC 2 cut(s) 1837, 2352
BsoBI CYCGRG 2 cut(s) 332, 629
Bsp120I GGGCCC 1 cut(s) 864
Bsp1286I GDGCHC 2 cut(s) 868, 1018
Bsp13I TCCGGA 1 cut(s) 2650
Bsp1407I TGTACA 1 cut(s) 2535
Bsp1720I GCTNAGC 1 cut(s) 1641
Bsp19I CCATGG 1 cut(s) 2582
BspANI GGCC 6 cut(s) 71, 80, 290, 866, 1347, 2719
BspCNI CTCAG 5 cut(s) 15, 355, 1030, 1138, 1633
BspEI TCCGGA 1 cut(s) 2650
BspFNI CGCG 5 cut(s) 74, 322, 324, 356, 380
BspHI TCATGA 3 cut(s) 1582, 1801, 1816
BspLI GGNNCC 6 cut(s) 81, 440, 866, 1044, 1943, 2490
BspMI ACCTGC 2 cut(s) 1223, 2596
BspPI GGATC 4 cut(s) 305, 1088, 1751, 1995
BspT107I GGYRCC 3 cut(s) 1042, 1941, 2488
BspTI CTTAAG 1 cut(s) 2363
BspTNI GGTCTC 2 cut(s) 1837, 2352
BsrBI CCGCTC 3 cut(s) 228, 554, 1467
BsrFI RCCGGY 2 cut(s) 85, 136
BsrGI TGTACA 1 cut(s) 2535
BsrI ACTGG 6 cut(s) 440, 743, 940, 1159, 1735, 2666
BssAI RCCGGY 2 cut(s) 85, 136
BssECI CCNNGG 8 cut(s) 72, 101, 370, 829, 1629, 2225, 2226, 2582
BssNI GRCGYC 6 cut(s) 128, 140, 206, 351, 386, 2638
BssT1I CCWWGG 1 cut(s) 2582
Bst2UI CCWGG 3 cut(s) 1020, 1176, 2227
Bst4CI ACNGT 4 cut(s) 285, 602, 2347, 2540
BstACI GRCGYC 6 cut(s) 128, 140, 206, 351, 386, 2638
BstAFI CTTAAG 1 cut(s) 2363
BstAPI GCANNNNNTGC 3 cut(s) 647, 796, 1229
BstAUI TGTACA 1 cut(s) 2535
BstBAI YACGTR 2 cut(s) 2429, 2687
BstC8I GCNNGC 2 cut(s) 57, 393
BstDEI CTNAG 5 cut(s) 23, 342, 1038, 1146, 1641
BstDSI CCRYGG 3 cut(s) 72, 1629, 2582
BstEII GGTNACC 1 cut(s) 44
BstF5I GGATG 7 cut(s) 481, 763, 1639, 2152, 2205, 2490, 2659
BstFNI CGCG 5 cut(s) 74, 322, 324, 356, 380
BstH2I RGCGCY 2 cut(s) 306, 2181
BstHHI GCGC 5 cut(s) 305, 324, 380, 2007, 2180
BstMAI GTCTC 6 cut(s) 56, 329, 1301, 1837, 2352, 2373
BstMCI CGRYCG 1 cut(s) 72
BstNI CCWGG 3 cut(s) 1020, 1176, 2227
BstNSI RCATGY 1 cut(s) 1451
BstPI GGTNACC 1 cut(s) 44
BstSCI CCNGG 5 cut(s) 100, 861, 1018, 1174, 2225
BstSFI CTRYAG 2 cut(s) 1110, 2343
BstSLI GKGCMC 1 cut(s) 868
BstUI CGCG 5 cut(s) 74, 322, 324, 356, 380
BstV1I GCAGC 6 cut(s) 362, 634, 1178, 1215, 1903, 1917
BstV2I GAAGAC 1 cut(s) 2747
BstX2I RGATCY 4 cut(s) 1093, 1126, 1756, 1987
BstXI CCANNNNNNTGG 1 cut(s) 1553
BstYI RGATCY 4 cut(s) 1093, 1126, 1756, 1987
BstZI CGGCCG 1 cut(s) 69
BsuI GTATCC 1 cut(s) 2588
BsuRI GGCC 6 cut(s) 71, 80, 290, 866, 1347, 2719
BtgI CCRYGG 3 cut(s) 72, 1629, 2582
BtsCI GGATG 7 cut(s) 481, 763, 1639, 2152, 2205, 2490, 2659
BtsI GCAGTG 2 cut(s) 1618, 2463
BtsIMutI CAGTG 6 cut(s) 933, 1417, 1618, 2055, 2463, 2673
BveI ACCTGC 2 cut(s) 1223, 2596
Cac8I GCNNGC 2 cut(s) 57, 393
CaiI CAGNNNCTG 1 cut(s) 55
CciI TCATGA 3 cut(s) 1582, 1801, 1816
CfoI GCGC 5 cut(s) 305, 324, 380, 2007, 2180
Cfr10I RCCGGY 2 cut(s) 85, 136
Cfr13I GGNCC 8 cut(s) 79, 289, 740, 864, 865, 1346, 1662, 2740
Cfr42I CCGCGG 1 cut(s) 75
CseI GACGC 7 cut(s) 117, 129, 359, 407, 1252, 2627, 2741
CsiI ACCWGGT 1 cut(s) 1174
Csp6I GTAC 6 cut(s) 281, 939, 1043, 1942, 2430, 2536
CviQI GTAC 6 cut(s) 281, 939, 1043, 1942, 2430, 2536
DdeI CTNAG 5 cut(s) 23, 342, 1038, 1146, 1641
DrdI GACNNNNNNGTC 3 cut(s) 130, 584, 2751
DriI GACNNNNNGTC 1 cut(s) 2365
DseDI GACNNNNNNGTC 3 cut(s) 130, 584, 2751
EaeI YGGCCR 1 cut(s) 69
EagI CGGCCG 1 cut(s) 69
Eam1105I GACNNNNNGTC 1 cut(s) 2365
EciI GGCGGA 2 cut(s) 74, 252
EclXI CGGCCG 1 cut(s) 69
Eco130I CCWWGG 1 cut(s) 2582
Eco24I GRGCYC 1 cut(s) 868
Eco31I GGTCTC 2 cut(s) 1837, 2352
Eco47I GGWCC 3 cut(s) 740, 1662, 2740
Eco47III AGCGCT 1 cut(s) 304
Eco52I CGGCCG 1 cut(s) 69
Eco57I CTGAAG 2 cut(s) 1976, 2079
Eco88I CYCGRG 2 cut(s) 332, 629
Eco91I GGTNACC 1 cut(s) 44
EcoO109I RGGNCCY 1 cut(s) 865
EcoO65I GGTNACC 1 cut(s) 44
EcoRI GAATTC 1 cut(s) 508
EcoRII CCWGG 3 cut(s) 1018, 1174, 2225
EcoT14I CCWWGG 1 cut(s) 2582
EcoT22I ATGCAT 1 cut(s) 2107
EcoT38I GRGCYC 1 cut(s) 868
ErhI CCWWGG 1 cut(s) 2582
Esp3I CGTCTC 2 cut(s) 56, 329
FaqI GGGAC 1 cut(s) 118
FauI CCCGC 3 cut(s) 90, 212, 221
FauNDI CATATG 3 cut(s) 643, 1228, 2023
FbaI TGATCA 1 cut(s) 1615
FblI GTMKAC 2 cut(s) 576, 682
FokI GGATG 7 cut(s) 488, 770, 1646, 2139, 2192, 2497, 2666
FriOI GRGCYC 1 cut(s) 868
FspBI CTAG 4 cut(s) 293, 656, 1050, 1722
GlaI GCGC 5 cut(s) 304, 323, 379, 2006, 2179
GsaI CCCAGC 2 cut(s) 1949, 2734
GsuI CTGGAG 1 cut(s) 457
HaeII RGCGCY 2 cut(s) 306, 2181
HaeIII GGCC 6 cut(s) 71, 80, 290, 866, 1347, 2719
HapII CCGG 7 cut(s) 86, 101, 137, 862, 2477, 2492, 2651
HgaI GACGC 7 cut(s) 117, 129, 359, 407, 1252, 2627, 2741
HhaI GCGC 5 cut(s) 305, 324, 380, 2007, 2180
Hin1I GRCGYC 6 cut(s) 128, 140, 206, 351, 386, 2638
Hin6I GCGC 5 cut(s) 303, 322, 378, 2005, 2178
HinP1I GCGC 5 cut(s) 303, 322, 378, 2005, 2178
HincII GTYRAC 3 cut(s) 577, 598, 2662
HindII GTYRAC 3 cut(s) 577, 598, 2662
HindIII AAGCTT 2 cut(s) 29, 1794
HpaI GTTAAC 1 cut(s) 598
HpaII CCGG 7 cut(s) 86, 101, 137, 862, 2477, 2492, 2651
HphI GGTGA 6 cut(s) 56, 126, 205, 1467, 2039, 2111
Hpy166II GTNNAC 8 cut(s) 577, 598, 683, 958, 1136, 2463, 2536, 2662
Hpy8I GTNNAC 8 cut(s) 577, 598, 683, 958, 1136, 2463, 2536, 2662
HpyAV CCTTC 5 cut(s) 765, 1517, 2305, 2398, 2730
HpyCH4III ACNGT 4 cut(s) 285, 602, 2347, 2540
HpyCH4IV ACGT 6 cut(s) 206, 386, 1932, 2428, 2658, 2686
HpyF3I CTNAG 5 cut(s) 23, 342, 1038, 1146, 1641
HpySE526I ACGT 6 cut(s) 206, 386, 1932, 2428, 2658, 2686
Hsp92I GRCGYC 6 cut(s) 128, 140, 206, 351, 386, 2638
HspAI GCGC 5 cut(s) 303, 322, 378, 2005, 2178
Kpn2I TCCGGA 1 cut(s) 2650
KpnI GGTACC 2 cut(s) 1046, 1945
Ksp22I TGATCA 1 cut(s) 1615
KspAI GTTAAC 1 cut(s) 598
KspI CCGCGG 1 cut(s) 75
LmnI GCTCC 8 cut(s) 225, 438, 950, 1021, 1062, 1083, 1174, 2615
Lsp1109I GCAGC 6 cut(s) 362, 634, 1178, 1215, 1903, 1917
LweI GCATC 9 cut(s) 408, 519, 659, 742, 1232, 1481, 2092, 2260, 2362
MabI ACCWGGT 1 cut(s) 1174
MaeI CTAG 4 cut(s) 293, 656, 1050, 1722
MaeII ACGT 6 cut(s) 206, 386, 1932, 2428, 2658, 2686
MaeIII GTNAC 6 cut(s) 44, 132, 1928, 2182, 2411, 2424
MbiI CCGCTC 3 cut(s) 228, 554, 1467
MfeI CAATTG 1 cut(s) 1859
MflI RGATCY 4 cut(s) 1093, 1126, 1756, 1987
MhlI GDGCHC 2 cut(s) 868, 1018
MlyI GAGTC 6 cut(s) 106, 197, 668, 1303, 2739, 2791
MmeI TCCRAC 7 cut(s) 727, 826, 1440, 2593, 2602, 2749, 2767
Mph1103I ATGCAT 1 cut(s) 2107
MroI TCCGGA 1 cut(s) 2650
MroXI GAANNNNTTC 2 cut(s) 1797, 1843
MslI CAYNNNNRTG 4 cut(s) 182, 1103, 1551, 2157
MspA1I CMGCKG 1 cut(s) 74
MspCI CTTAAG 1 cut(s) 2363
MspI CCGG 7 cut(s) 86, 101, 137, 862, 2477, 2492, 2651
MspR9I CCNGG 5 cut(s) 102, 863, 1020, 1176, 2227
MunI CAATTG 1 cut(s) 1859
Mva1269I GAATGC 3 cut(s) 1792, 1918, 2292
MvaI CCWGG 3 cut(s) 1020, 1176, 2227
MvnI CGCG 5 cut(s) 74, 322, 324, 356, 380
NciI CCSGG 2 cut(s) 102, 863
NcoI CCATGG 1 cut(s) 2582
NdeI CATATG 3 cut(s) 643, 1228, 2023
NlaIV GGNNCC 6 cut(s) 81, 440, 866, 1044, 1943, 2490
NmeAIII GCCGAG 2 cut(s) 351, 2701
NmuCI GTSAC 5 cut(s) 44, 132, 1928, 2411, 2424
NsiI ATGCAT 1 cut(s) 2107
NspI RCATGY 1 cut(s) 1451
OliI CACNNNNGTG 1 cut(s) 182
PaeR7I CTCGAG 1 cut(s) 629
PagI TCATGA 3 cut(s) 1582, 1801, 1816
PaqCI CACCTGC 1 cut(s) 1223
PasI CCCWGGG 1 cut(s) 2226
PcsI WCGNNNNNNNCGW 2 cut(s) 137, 158
PctI GAATGC 3 cut(s) 1792, 1918, 2292
PdmI GAANNNNTTC 2 cut(s) 1797, 1843
PfeI GAWTC 8 cut(s) 112, 174, 317, 700, 1288, 1504, 1871, 2625
Pfl23II CGTACG 1 cut(s) 2429
PflFI GACNNNGTC 1 cut(s) 127
PflMI CCANNNNNTGG 2 cut(s) 55, 2737
PfoI TCCNGGA 1 cut(s) 1018
PleI GAGTC 6 cut(s) 105, 196, 667, 1303, 2739, 2791
PpsI GAGTC 6 cut(s) 105, 196, 667, 1303, 2739, 2791
Ppu21I YACGTR 2 cut(s) 2429, 2687
PsiI TTATAA 1 cut(s) 459
Psp6I CCWGG 3 cut(s) 1018, 1174, 2225
PspEI GGTNACC 1 cut(s) 44
PspFI CCCAGC 2 cut(s) 1945, 2730
PspGI CCWGG 3 cut(s) 1018, 1174, 2225
PspLI CGTACG 1 cut(s) 2429
PspN4I GGNNCC 6 cut(s) 81, 440, 866, 1044, 1943, 2490
PspOMI GGGCCC 1 cut(s) 864
PspPI GGNCC 8 cut(s) 79, 289, 740, 864, 865, 1346, 1662, 2740
PstNI CAGNNNCTG 1 cut(s) 55
PsuI RGATCY 4 cut(s) 1093, 1126, 1756, 1987
PsyI GACNNNGTC 1 cut(s) 127
RsaI GTAC 6 cut(s) 282, 940, 1044, 1943, 2431, 2537
RsaNI GTAC 6 cut(s) 281, 939, 1043, 1942, 2430, 2536
RseI CAYNNNNRTG 4 cut(s) 182, 1103, 1551, 2157
SacII CCGCGG 1 cut(s) 75
SalI GTCGAC 1 cut(s) 575
Sau96I GGNCC 8 cut(s) 79, 289, 740, 864, 865, 1346, 1662, 2740
SchI GAGTC 6 cut(s) 106, 197, 668, 1303, 2739, 2791
ScrFI CCNGG 5 cut(s) 102, 863, 1020, 1176, 2227
SduI GDGCHC 2 cut(s) 868, 1018
SexAI ACCWGGT 1 cut(s) 1174
SfaNI GCATC 9 cut(s) 408, 519, 659, 742, 1232, 1481, 2092, 2260, 2362
SfcI CTRYAG 2 cut(s) 1110, 2343
SfiI GGCCNNNNNGGCC 1 cut(s) 77
Sfr274I CTCGAG 1 cut(s) 629
Sfr303I CCGCGG 1 cut(s) 75
SgrAI CRCCGGYG 2 cut(s) 85, 136
SgrBI CCGCGG 1 cut(s) 75
SinI GGWCC 3 cut(s) 740, 1662, 2740
SlaI CTCGAG 1 cut(s) 629
SmiMI CAYNNNNRTG 4 cut(s) 182, 1103, 1551, 2157
SmlI CTYRAG 5 cut(s) 629, 1207, 1304, 2363, 2747
SmoI CTYRAG 5 cut(s) 629, 1207, 1304, 2363, 2747
SpeI ACTAGT 2 cut(s) 1049, 1721
SspMI CTAG 4 cut(s) 293, 656, 1050, 1722
StyD4I CCNGG 5 cut(s) 100, 861, 1018, 1174, 2225
StyI CCWWGG 1 cut(s) 2582
TaaI ACNGT 4 cut(s) 285, 602, 2347, 2540
TaiI ACGT 6 cut(s) 209, 389, 1935, 2431, 2661, 2689
TaqI TCGA 9 cut(s) 5, 348, 506, 550, 576, 630, 2149, 2356, 2800
TatI WGTACW 1 cut(s) 2535
TauI GCSGC 4 cut(s) 74, 356, 383, 1418
TfiI GAWTC 8 cut(s) 112, 174, 317, 700, 1288, 1504, 1871, 2625
TscAI CASTG 6 cut(s) 940, 1417, 1618, 2062, 2470, 2673
TseFI GTSAC 5 cut(s) 44, 132, 1928, 2411, 2424
TseI GCWGC 6 cut(s) 375, 647, 1166, 1203, 1905, 1916
Tsp45I GTSAC 5 cut(s) 44, 132, 1928, 2411, 2424
TspGWI ACGGA 2 cut(s) 376, 1663
TspRI CASTG 6 cut(s) 940, 1417, 1618, 2062, 2470, 2673
Tth111I GACNNNGTC 1 cut(s) 127
Van91I CCANNNNNTGG 2 cut(s) 55, 2737
Vha464I CTTAAG 1 cut(s) 2363
VpaK11BI GGWCC 3 cut(s) 740, 1662, 2740
XbaI TCTAGA 1 cut(s) 655
XceI RCATGY 1 cut(s) 1451
XhoI CTCGAG 1 cut(s) 629
XmiI GTMKAC 2 cut(s) 576, 682
XmnI GAANNNNTTC 2 cut(s) 1797, 1843
XspI CTAG 4 cut(s) 293, 656, 1050, 1722
ZraI GACGTC 2 cut(s) 207, 387
Zsp2I ATGCAT 1 cut(s) 2107
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.