Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6B

Orthogroup ID

OG0009210

Physical Location & Seq

Genomic Coordinates Reverse (-)

54014974 .. 54020841

Gene Structure 5868 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6BG311000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1851 bp

ATGGATTCGGAAGCGCAAAATCCATCGCAAGTGCTTGCTACACTGCTCAGCAAGAGAACCAAGCTTCAAGACGAACTCAGAGGAATTGAGAAACAGGTCTATGATCTAGAGACTACGTATCTGCAGGACCCGAGTCAATGTGGCAATGTATTAAAAGGGTTTGAAGGGTTTCTATCTTCATCAAAGAGCACTGCCTTCCTGAAGCGATCTAGGAAATTTCAACCTGAAGACAGGCTCTTCTCATTATCTTCCGTGACATCACCAGCAGCTGAAGAACTTACAGCTGGACGAGATGATGGGAGATCAGACTTTGGTCCCGGCCGTTCAAAAGGGGGTATATACGCGAATGGGCAAGGAAAACCGAAGAAAGGAAGACCTACTCCAAGAGATGCAAAGAGAATCAGGCCATCGAGTGAACAAGATTATGACTATGAAGATGATCCTGATATGATCATGGCTGTAGAATCACTTTTCCGTTACAGTGGCGGTGAAGCCCCTCCGATTCTGCCGCCGAATTTCTTATCCCCTACTTTTGCTTGTTGGTTTAGTCTTCTTATGAACTTACTGGAGAGGATAAAGATGCAGAAGAAGGAGCCAGATAAAGCGCCGCCGCCGCCTGAGCTGCCGGCGTACTGGATCGAAACCTCTGAAGCAGTCTCATACCGCTGTGAATTTGAACCCCACGGTCACCTCTCTGTGAAAATTCTTGATGACTCGAGGCCGGTAATCCGTAGGGTTGCAGATTCCTTCGTCAATAAGTTTTTCCCCTCAGGATATCCATATAGTGTCAATGAGGGATATCTCAGGTACACACAATTTCGGGCACTGCAACACTTCACCAGTGCAGCGCTTTCGGTGCTTTCAACTCAGTCACTCCTGTTTGCTGCAGGCTTGCGACCTACCCCTGCACAAGCAACTGTTGTTAGTTGGGTCCTAAAGGATGGGATGCAGCACATGGGTAAGCTCATATGTAGTAATTTGGGTGCAAGAATGGATTCAGAGCCTAAACGCTGGAGAATTTTGGCTGATGTACTCTATGACTTGGGCACTGGCTTAGAAGTTCTTTCTCCTTTATGTCCACAATTTTTTCTTGAAGTTGCAGGCCTAGGCAATTTTGCAAAGGGGATGGCAGTTGTTGCAGCAAGAGCAACAAGATTACCAATTTATTCCTCCTTTGCAAAAGAAGGCAATCTTAGTGACCTGTTTGCAAAAGGGGAGGCAATCTCAACTGTGTTCAATGTTCTTGGAATAGGGTTAGGAATCCAGTTAGCATCTACTATCTGTTCATCAATTCAAGGAAAGATGGTAGTTGGGCCTCTTCTTTCAATCGTACATGTATCTTGTGTCATTGAAGAAATGCGGGCAACTCCTGTGAACACTCTGAATCCTCAGAGGACCGCAATGCTTGTGGCTGATTTCATCAAGACGGGAAAAGTATCAAGCCCAGCTGACCTAAGGTATAAAGAAGATCTTCTCTTTCCTGGGCGACTCATAGAAGATGCTGGAAATGTAAAAGTGGGAAAGTCCTTCCGCAAGGTTTTTAAGCCTTCAAAACTTGATGAATTGAAACAAATATTCCCAGACGAGAAGTTTCTTCTGCATCCTGGAAAAAAATCGGTTGACATGGTATTGGAGCACAGTGCTACCGGTGAAGATGCCTTGAGGGGGTGGCTTGTTGCCGGATTTGCAGCTGACATGGAGAAGTCTTTTCATGTTCCAACTTCAACTGCACTCGAAGAGGCTTACGAGAAGATGAATGATGTATTTGGTCCATTTGTTTCTGAACTTCAGGCCAAGGGGTGGCACACCGATCGTTTTCTTGACGGAACAGGAAGTCGTTTTGCTTGGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006810 GO:0008150 GO:0009314 GO:0009411 GO:0009416 GO:0009507 GO:0009526 GO:0009536 GO:0009628 GO:0009914 GO:0009926 GO:0009941 GO:0010224 GO:0010817 GO:0031967 GO:0031975 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0050896 GO:0051179 GO:0051234 GO:0060918 GO:0065007 GO:0065008

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF647

Protein Analysis

616

Amino Acids

68.13

Weight (kDa)

7.58

Isoelectric Point (pI)

44.64

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
NuA4	PF09340	12 - 88	1.3e-25	Histone acetyltransferase subunit NuA4
UVB_sens_prot	PF04884	244 - 476	4.6e-72	Vitamin B6 photo-protection and homoeostasis domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009210)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G31190 AT2G31190
fragaria_vesca	FvH4_2g21510 FvH4_2g21510
malus_domestica	MD05G1197700.v1.1 MD10G1184300.v1.1
prunus_persica	Prupe.8G224000_v2.0.a1 Prupe.8G224000_v2.0.a1
pyrus_communis	pycom05g18460 pycom10g15960
rosa_chinensis	RchiOBHm_Chr6g0288161
rosa_laevigata	RLG00000012433
rosa_multiflora	Rmu_sc0002207.1_g000007
rosa_roxburghii	Rroxscaffold_7G00180430
rosa_rugosa	Rorug06G0194600 Rorug06G0194600
rosa_samantha	Rh6AG305000 Rh6BG311000 Rh6CG319000 Rh6DG304100
rosa_wichuraiana	Rw0G014450 Rw6G026400

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	1800
AccII	CGCG	1 cut(s)	344
AciI	CCGC	9 cut(s)	486, 509, 608, 611, 614, 664, 1360, 1398, 1531
AclWI	GGATC	2 cut(s)	434, 644
AcoI	YGGCCR	1 cut(s)	319
AcsI	RAATTY	5 cut(s)	215, 514, 671, 702, 1017
AcuI	CTGAAG	5 cut(s)	221, 246, 291, 669, 1772
AfaI	GTAC	4 cut(s)	632, 809, 1032, 1332
AfeI	AGCGCT	1 cut(s)	849
AfiI	CCNNNNNNNGG	3 cut(s)	368, 1665, 1800
AflIII	ACRYGT	1 cut(s)	1333
AgeI	ACCGGT	1 cut(s)	1646
AjnI	CCWGG	2 cut(s)	1480, 1603
AluBI	AGCT	7 cut(s)	64, 269, 284, 622, 964, 1448, 1691
AluI	AGCT	7 cut(s)	64, 269, 284, 622, 964, 1448, 1691
Alw21I	GWGCWC	2 cut(s)	191, 1638
Alw26I	GTCTC	2 cut(s)	104, 661
AlwI	GGATC	2 cut(s)	434, 644
AlwNI	CAGNNNCTG	1 cut(s)	269
Ama87I	CYCGRG	2 cut(s)	130, 715
Aor51HI	AGCGCT	1 cut(s)	849
AoxI	GGCC	6 cut(s)	319, 404, 719, 1102, 1313, 1791
ApeKI	GCWGC	7 cut(s)	266, 622, 845, 884, 949, 1139, 1688
ApoI	RAATTY	5 cut(s)	215, 514, 671, 702, 1017
AsiGI	ACCGGT	1 cut(s)	1646
Asp700I	GAANNNNTTC	3 cut(s)	168, 994, 1470
AspA2I	CCTAGG	1 cut(s)	1105
AspLEI	GCGC	3 cut(s)	16, 607, 850
AspS9I	GGNCC	6 cut(s)	127, 314, 931, 1313, 1395, 1769
AsuC2I	CCSGG	1 cut(s)	318
AsuHPI	GGTGA	5 cut(s)	252, 500, 680, 829, 1661
AvaI	CYCGRG	2 cut(s)	130, 715
AvaII	GGWCC	5 cut(s)	127, 314, 931, 1395, 1769
AvrII	CCTAGG	1 cut(s)	1105
AxyI	CCTNAGG	2 cut(s)	769, 1454
BaeGI	GKGCMC	2 cut(s)	826, 1049
BbsI	GAAGAC	3 cut(s)	234, 379, 542
Bbv12I	GWGCWC	2 cut(s)	191, 1638
BbvI	GCAGC	7 cut(s)	278, 609, 857, 871, 961, 1151, 1700
BccI	CCATC	6 cut(s)	31, 290, 415, 935, 1120, 1297
BceAI	ACGGC	1 cut(s)	306
BcgI	CGANNNNNNTGC	4 cut(s)	834, 868, 1793, 1827
BciT130I	CCWGG	2 cut(s)	1482, 1605
BclI	TGATCA	1 cut(s)	450
BcnI	CCSGG	1 cut(s)	318
BcoDI	GTCTC	2 cut(s)	104, 661
BfaI	CTAG	3 cut(s)	107, 210, 1106
BfmI	CTRYAG	3 cut(s)	122, 459, 885
BfoI	RGCGCY	2 cut(s)	608, 851
BglII	AGATCT	1 cut(s)	1468
BlnI	CCTAGG	1 cut(s)	1105
BlpI	GCTNAGC	1 cut(s)	47
Bme1390I	CCNGG	3 cut(s)	318, 1482, 1605
Bme18I	GGWCC	5 cut(s)	127, 314, 931, 1395, 1769
BmeT110I	CYCGRG	2 cut(s)	130, 715
BmgT120I	GGNCC	6 cut(s)	127, 314, 931, 1313, 1395, 1769
BmiI	GGNNCC	4 cut(s)	129, 316, 594, 932
BmrFI	CCNGG	3 cut(s)	318, 1482, 1605
BmsI	GCATC	7 cut(s)	379, 570, 936, 1280, 1489, 1609, 1645
BoxI	GACNNNNGTC	2 cut(s)	132, 312
BpiI	GAAGAC	3 cut(s)	234, 379, 542
BplI	GAGNNNNNCTC	2 cut(s)	1208, 1240
BpmI	CTGGAG	2 cut(s)	587, 1033
Bpu10I	CCTNAGC	1 cut(s)	618
Bpu1102I	GCTNAGC	1 cut(s)	47
BpuEI	CTTGAG	1 cut(s)	1681
BpuMI	CCSGG	1 cut(s)	318
BsaAI	YACGTR	1 cut(s)	117
BsaJI	CCNNGG	4 cut(s)	682, 1105, 1481, 1794
BsaWI	WCCGGW	1 cut(s)	1646
Bsc4I	CCNNNNNNNGG	3 cut(s)	368, 1665, 1800
Bse118I	RCCGGY	3 cut(s)	625, 721, 1646
Bse1I	ACTGG	5 cut(s)	570, 638, 840, 1054, 1264
Bse21I	CCTNAGG	2 cut(s)	769, 1454
Bse3DI	GCAATG	2 cut(s)	151, 1407
BseBI	CCWGG	2 cut(s)	1482, 1605
BseDI	CCNNGG	4 cut(s)	682, 1105, 1481, 1794
BseGI	GGATG	4 cut(s)	946, 951, 1131, 1600
BseLI	CCNNNNNNNGG	3 cut(s)	368, 1665, 1800
BseMI	GCAATG	2 cut(s)	151, 1407
BseMII	CTCAG	7 cut(s)	61, 91, 609, 783, 817, 881, 1403
BseNI	ACTGG	5 cut(s)	570, 638, 840, 1054, 1264
BseSI	GKGCMC	2 cut(s)	826, 1049
BseX3I	CGGCCG	1 cut(s)	319
BseXI	GCAGC	7 cut(s)	278, 609, 857, 871, 961, 1151, 1700
BseYI	CCCAGC	1 cut(s)	1444
BsgI	GTGCAG	3 cut(s)	864, 891, 1713
Bsh1236I	CGCG	1 cut(s)	344
Bsh1285I	CGRYCG	2 cut(s)	322, 1813
BshFI	GGCC	6 cut(s)	321, 406, 721, 1104, 1315, 1793
BshTI	ACCGGT	1 cut(s)	1646
BsiEI	CGRYCG	2 cut(s)	322, 1813
BsiHKAI	GWGCWC	2 cut(s)	191, 1638
BsiHKCI	CYCGRG	2 cut(s)	130, 715
BsiSI	CCGG	5 cut(s)	318, 626, 722, 1647, 1680
BslFI	GGGAC	1 cut(s)	300
BslI	CCNNNNNNNGG	3 cut(s)	368, 1665, 1800
BsmAI	GTCTC	2 cut(s)	104, 661
BsmFI	GGGAC	1 cut(s)	300
BsnI	GGCC	6 cut(s)	321, 406, 721, 1104, 1315, 1793
BsoBI	CYCGRG	2 cut(s)	130, 715
Bsp1286I	GDGCHC	4 cut(s)	191, 826, 1049, 1638
Bsp143I	GATC	8 cut(s)	103, 206, 302, 439, 450, 636, 1468, 1810
Bsp1720I	GCTNAGC	1 cut(s)	47
BspACI	CCGC	9 cut(s)	486, 509, 608, 611, 614, 664, 1360, 1398, 1531
BspANI	GGCC	6 cut(s)	321, 406, 721, 1104, 1315, 1793
BspCNI	CTCAG	7 cut(s)	60, 90, 610, 782, 816, 880, 1402
BspFNI	CGCG	1 cut(s)	344
BspLI	GGNNCC	4 cut(s)	129, 316, 594, 932
BspMAI	CTGCAG	2 cut(s)	126, 889
BspPI	GGATC	2 cut(s)	434, 644
BspQI	GCTCTTC	1 cut(s)	242
BsrDI	GCAATG	2 cut(s)	151, 1407
BsrFI	RCCGGY	3 cut(s)	625, 721, 1646
BsrI	ACTGG	5 cut(s)	570, 638, 840, 1054, 1264
BssAI	RCCGGY	3 cut(s)	625, 721, 1646
BssECI	CCNNGG	4 cut(s)	682, 1105, 1481, 1794
BssMI	GATC	8 cut(s)	103, 206, 302, 439, 450, 636, 1468, 1810
BssT1I	CCWWGG	2 cut(s)	1105, 1794
Bst2UI	CCWGG	2 cut(s)	1482, 1605
Bst4CI	ACNGT	5 cut(s)	482, 686, 919, 1231, 1640
Bst6I	CTCTTC	3 cut(s)	242, 1323, 1731
BstAPI	GCANNNNNTGC	1 cut(s)	1136
BstBAI	YACGTR	1 cut(s)	117
BstC8I	GCNNGC	6 cut(s)	36, 627, 889, 893, 1102, 1362
BstDSI	CCRYGG	1 cut(s)	682
BstEII	GGTNACC	1 cut(s)	686
BstF5I	GGATG	4 cut(s)	946, 951, 1131, 1600
BstFNI	CGCG	1 cut(s)	344
BstH2I	RGCGCY	2 cut(s)	608, 851
BstHHI	GCGC	3 cut(s)	16, 607, 850
BstKTI	GATC	8 cut(s)	106, 209, 305, 442, 453, 639, 1471, 1813
BstMAI	GTCTC	2 cut(s)	104, 661
BstMBI	GATC	8 cut(s)	103, 206, 302, 439, 450, 636, 1468, 1810
BstMCI	CGRYCG	2 cut(s)	322, 1813
BstMWI	GCNNNNNNNGC	7 cut(s)	613, 619, 622, 856, 1136, 1145, 1685
BstNI	CCWGG	2 cut(s)	1482, 1605
BstNSI	RCATGY	1 cut(s)	1337
BstPAI	GACNNNNGTC	2 cut(s)	132, 312
BstPI	GGTNACC	1 cut(s)	686
BstSCI	CCNGG	3 cut(s)	316, 1480, 1603
BstSFI	CTRYAG	3 cut(s)	122, 459, 885
BstSLI	GKGCMC	2 cut(s)	826, 1049
BstSNI	TACGTA	1 cut(s)	117
BstUI	CGCG	1 cut(s)	344
BstV1I	GCAGC	7 cut(s)	278, 609, 857, 871, 961, 1151, 1700
BstV2I	GAAGAC	3 cut(s)	234, 379, 542
BstX2I	RGATCY	1 cut(s)	1468
BstYI	RGATCY	1 cut(s)	1468
BstZI	CGGCCG	1 cut(s)	319
Bsu36I	CCTNAGG	2 cut(s)	769, 1454
BsuRI	GGCC	6 cut(s)	321, 406, 721, 1104, 1315, 1793
BtgI	CCRYGG	1 cut(s)	682
BtgZI	GCGATG	1 cut(s)	9
BtsCI	GGATG	4 cut(s)	946, 951, 1131, 1600
BtsI	GCAGTG	3 cut(s)	41, 189, 824
BtsIMutI	CAGTG	7 cut(s)	41, 189, 487, 824, 847, 1047, 1645
Cac8I	GCNNGC	6 cut(s)	36, 627, 889, 893, 1102, 1362
CaiI	CAGNNNCTG	1 cut(s)	269
CfoI	GCGC	3 cut(s)	16, 607, 850
Cfr10I	RCCGGY	3 cut(s)	625, 721, 1646
Cfr13I	GGNCC	6 cut(s)	127, 314, 931, 1313, 1395, 1769
Csp6I	GTAC	4 cut(s)	631, 808, 1031, 1331
CspAI	ACCGGT	1 cut(s)	1646
CspCI	CAANNNNNGTGG	2 cut(s)	1389, 1424
CviAII	CATG	6 cut(s)	454, 955, 1334, 1624, 1696, 1712
CviQI	GTAC	4 cut(s)	631, 808, 1031, 1331
DpnI	GATC	8 cut(s)	105, 208, 304, 441, 452, 638, 1470, 1812
DpnII	GATC	8 cut(s)	103, 206, 302, 439, 450, 636, 1468, 1810
EaeI	YGGCCR	1 cut(s)	319
EagI	CGGCCG	1 cut(s)	319
Eam1104I	CTCTTC	3 cut(s)	242, 1323, 1731
EarI	CTCTTC	3 cut(s)	242, 1323, 1731
EclXI	CGGCCG	1 cut(s)	319
Eco105I	TACGTA	1 cut(s)	117
Eco130I	CCWWGG	2 cut(s)	1105, 1794
Eco147I	AGGCCT	1 cut(s)	1104
Eco32I	GATATC	2 cut(s)	776, 800
Eco47I	GGWCC	5 cut(s)	127, 314, 931, 1395, 1769
Eco47III	AGCGCT	1 cut(s)	849
Eco52I	CGGCCG	1 cut(s)	319
Eco57I	CTGAAG	5 cut(s)	221, 246, 291, 669, 1772
Eco81I	CCTNAGG	2 cut(s)	769, 1454
Eco88I	CYCGRG	2 cut(s)	130, 715
Eco91I	GGTNACC	1 cut(s)	686
EcoO109I	RGGNCCY	2 cut(s)	127, 931
EcoO65I	GGTNACC	1 cut(s)	686
EcoRII	CCWGG	2 cut(s)	1480, 1603
EcoRV	GATATC	2 cut(s)	776, 800
EcoT14I	CCWWGG	2 cut(s)	1105, 1794
ErhI	CCWWGG	2 cut(s)	1105, 1794
FaeI	CATG	6 cut(s)	457, 958, 1337, 1627, 1699, 1715
FalI	AAGNNNNNCTT	4 cut(s)	1176, 1208, 1455, 1487
FaqI	GGGAC	1 cut(s)	300
FatI	CATG	6 cut(s)	453, 954, 1333, 1623, 1695, 1711
FauI	CCCGC	1 cut(s)	1353
FauNDI	CATATG	1 cut(s)	968
FbaI	TGATCA	1 cut(s)	450
FokI	GGATG	4 cut(s)	953, 958, 1138, 1587
FspBI	CTAG	3 cut(s)	107, 210, 1106
GlaI	GCGC	3 cut(s)	15, 606, 849
GsaI	CCCAGC	1 cut(s)	1448
GsuI	CTGGAG	2 cut(s)	587, 1033
HaeII	RGCGCY	2 cut(s)	608, 851
HaeIII	GGCC	6 cut(s)	321, 406, 721, 1104, 1315, 1793
HapII	CCGG	5 cut(s)	318, 626, 722, 1647, 1680
HhaI	GCGC	3 cut(s)	16, 607, 850
Hin1II	CATG	6 cut(s)	457, 958, 1337, 1627, 1699, 1715
Hin6I	GCGC	3 cut(s)	14, 605, 848
HinP1I	GCGC	3 cut(s)	14, 605, 848
HincII	GTYRAC	1 cut(s)	1621
HindII	GTYRAC	1 cut(s)	1621
HindIII	AAGCTT	1 cut(s)	62
HpaII	CCGG	5 cut(s)	318, 626, 722, 1647, 1680
HphI	GGTGA	5 cut(s)	252, 500, 680, 829, 1661
Hpy166II	GTNNAC	5 cut(s)	416, 810, 1079, 1375, 1621
Hpy188I	TCNGA	9 cut(s)	10, 80, 307, 501, 649, 1000, 1383, 1392, 1783
Hpy188III	TCNNGA	9 cut(s)	68, 107, 199, 443, 707, 771, 1091, 1423, 1820
Hpy8I	GTNNAC	5 cut(s)	416, 810, 1079, 1375, 1621
HpyAV	CCTTC	7 cut(s)	158, 205, 583, 757, 1178, 1537, 1557
HpyCH4III	ACNGT	5 cut(s)	482, 686, 919, 1231, 1640
HpyCH4IV	ACGT	1 cut(s)	116
HpyF10VI	GCNNNNNNNGC	7 cut(s)	613, 619, 622, 856, 1136, 1145, 1685
HpySE526I	ACGT	1 cut(s)	116
Hsp92II	CATG	6 cut(s)	457, 958, 1337, 1627, 1699, 1715
HspAI	GCGC	3 cut(s)	14, 605, 848
KroI	GCCGGC	1 cut(s)	625
KroNI	GCCGGC	1 cut(s)	627
Ksp22I	TGATCA	1 cut(s)	450
Kzo9I	GATC	8 cut(s)	103, 206, 302, 439, 450, 636, 1468, 1810
LguI	GCTCTTC	1 cut(s)	242
LmnI	GCTCC	2 cut(s)	592, 1633
Lsp1109I	GCAGC	7 cut(s)	278, 609, 857, 871, 961, 1151, 1700
LweI	GCATC	7 cut(s)	379, 570, 936, 1280, 1489, 1609, 1645
MaeI	CTAG	3 cut(s)	107, 210, 1106
MaeII	ACGT	1 cut(s)	116
MaeIII	GTNAC	5 cut(s)	253, 476, 686, 870, 1196
MalI	GATC	8 cut(s)	105, 208, 304, 441, 452, 638, 1470, 1812
MboI	GATC	8 cut(s)	103, 206, 302, 439, 450, 636, 1468, 1810
MflI	RGATCY	1 cut(s)	1468
MhlI	GDGCHC	4 cut(s)	191, 826, 1049, 1638
MlyI	GAGTC	3 cut(s)	142, 707, 1482
MmeI	TCCRAC	1 cut(s)	1742
MroNI	GCCGGC	1 cut(s)	625
MroXI	GAANNNNTTC	3 cut(s)	168, 994, 1470
MseI	TTAA	2 cut(s)	152, 1542
MspA1I	CMGCKG	5 cut(s)	269, 284, 666, 1448, 1691
MspI	CCGG	5 cut(s)	318, 626, 722, 1647, 1680
MspR9I	CCNGG	3 cut(s)	318, 1482, 1605
MvaI	CCWGG	2 cut(s)	1482, 1605
MvnI	CGCG	1 cut(s)	344
MwoI	GCNNNNNNNGC	7 cut(s)	613, 619, 622, 856, 1136, 1145, 1685
NaeI	GCCGGC	1 cut(s)	627
NciI	CCSGG	1 cut(s)	318
NdeI	CATATG	1 cut(s)	968
NdeII	GATC	8 cut(s)	103, 206, 302, 439, 450, 636, 1468, 1810
NgoMIV	GCCGGC	1 cut(s)	625
NlaIII	CATG	6 cut(s)	457, 958, 1337, 1627, 1699, 1715
NlaIV	GGNNCC	4 cut(s)	129, 316, 594, 932
NmuCI	GTSAC	4 cut(s)	253, 686, 870, 1196
NspI	RCATGY	1 cut(s)	1337
PaeR7I	CTCGAG	1 cut(s)	715
PceI	AGGCCT	1 cut(s)	1104
PciI	ACATGT	1 cut(s)	1333
PciSI	GCTCTTC	1 cut(s)	242
PdiI	GCCGGC	1 cut(s)	627
PdmI	GAANNNNTTC	3 cut(s)	168, 994, 1470
PfeI	GAWTC	8 cut(s)	5, 399, 464, 502, 743, 995, 1260, 1384
PflMI	CCANNNNNTGG	1 cut(s)	1800
PfoI	TCCNGGA	1 cut(s)	1603
PinAI	ACCGGT	1 cut(s)	1646
Ple19I	CGATCG	1 cut(s)	1813
PleI	GAGTC	3 cut(s)	141, 707, 1482
PpsI	GAGTC	3 cut(s)	141, 707, 1482
Ppu21I	YACGTR	1 cut(s)	117
PpuMI	RGGWCCY	2 cut(s)	127, 931
PscI	ACATGT	1 cut(s)	1333
PshAI	GACNNNNGTC	2 cut(s)	132, 312
Psp5II	RGGWCCY	2 cut(s)	127, 931
Psp6I	CCWGG	2 cut(s)	1480, 1603
PspEI	GGTNACC	1 cut(s)	686
PspFI	CCCAGC	1 cut(s)	1444
PspGI	CCWGG	2 cut(s)	1480, 1603
PspN4I	GGNNCC	4 cut(s)	129, 316, 594, 932
PspPI	GGNCC	6 cut(s)	127, 314, 931, 1313, 1395, 1769
PspPPI	RGGWCCY	2 cut(s)	127, 931
PspXI	VCTCGAGB	1 cut(s)	715
PstI	CTGCAG	2 cut(s)	126, 889
PstNI	CAGNNNCTG	1 cut(s)	269
PsuI	RGATCY	1 cut(s)	1468
PvuI	CGATCG	1 cut(s)	1813
PvuII	CAGCTG	4 cut(s)	269, 284, 1448, 1691
RsaI	GTAC	4 cut(s)	632, 809, 1032, 1332
RsaNI	GTAC	4 cut(s)	631, 808, 1031, 1331
SapI	GCTCTTC	1 cut(s)	242
SaqAI	TTAA	2 cut(s)	152, 1542
Sau3AI	GATC	8 cut(s)	103, 206, 302, 439, 450, 636, 1468, 1810
Sau96I	GGNCC	6 cut(s)	127, 314, 931, 1313, 1395, 1769
SchI	GAGTC	3 cut(s)	142, 707, 1482
ScrFI	CCNGG	3 cut(s)	318, 1482, 1605
SduI	GDGCHC	4 cut(s)	191, 826, 1049, 1638
SfaNI	GCATC	7 cut(s)	379, 570, 936, 1280, 1489, 1609, 1645
SfcI	CTRYAG	3 cut(s)	122, 459, 885
Sfr274I	CTCGAG	1 cut(s)	715
SinI	GGWCC	5 cut(s)	127, 314, 931, 1395, 1769
SlaI	CTCGAG	1 cut(s)	715
SmlI	CTYRAG	2 cut(s)	715, 1660
SmoI	CTYRAG	2 cut(s)	715, 1660
SnaBI	TACGTA	1 cut(s)	117
SseBI	AGGCCT	1 cut(s)	1104
SsiI	CCGC	9 cut(s)	486, 509, 608, 611, 614, 664, 1360, 1398, 1531
SspI	AATATT	1 cut(s)	1575
SspMI	CTAG	3 cut(s)	107, 210, 1106
StuI	AGGCCT	1 cut(s)	1104
StyD4I	CCNGG	3 cut(s)	316, 1480, 1603
StyI	CCWWGG	2 cut(s)	1105, 1794
TaaI	ACNGT	5 cut(s)	482, 686, 919, 1231, 1640
TaiI	ACGT	1 cut(s)	119
TaqI	TCGA	4 cut(s)	410, 639, 716, 1734
TatI	WGTACW	1 cut(s)	1030
TauI	GCSGC	4 cut(s)	511, 610, 613, 616
TfiI	GAWTC	8 cut(s)	5, 399, 464, 502, 743, 995, 1260, 1384
Tru1I	TTAA	2 cut(s)	152, 1542
Tru9I	TTAA	2 cut(s)	152, 1542
TscAI	CASTG	7 cut(s)	48, 196, 487, 831, 847, 1054, 1645
TseFI	GTSAC	4 cut(s)	253, 686, 870, 1196
TseI	GCWGC	7 cut(s)	266, 622, 845, 884, 949, 1139, 1688
Tsp45I	GTSAC	4 cut(s)	253, 686, 870, 1196
TspDTI	ATGAA	8 cut(s)	168, 447, 572, 1275, 1408, 1575, 1700, 1769
TspGWI	ACGGA	4 cut(s)	241, 464, 719, 1839
TspRI	CASTG	7 cut(s)	48, 196, 487, 831, 847, 1054, 1645
Van91I	CCANNNNNTGG	1 cut(s)	1800
VpaK11BI	GGWCC	5 cut(s)	127, 314, 931, 1395, 1769
XapI	RAATTY	5 cut(s)	215, 514, 671, 702, 1017
XbaI	TCTAGA	1 cut(s)	106
XceI	RCATGY	1 cut(s)	1337
XhoI	CTCGAG	1 cut(s)	715
XmaJI	CCTAGG	1 cut(s)	1105
XmnI	GAANNNNTTC	3 cut(s)	168, 994, 1470
XspI	CTAG	3 cut(s)	107, 210, 1106

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.