Chalcone isomerase-like
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G63170 |
| fragaria_vesca | FvH4_2g23480 |
| malus_domestica | MD03G1263700.v1.1 |
| prunus_persica | Prupe.8G240000_v2.0.a1 Prupe.8G240100_v2.0.a1 Prupe.8G240100_v2.0.a1 |
| pyrus_communis | pycom03g21140 |
| rosa_chinensis | RchiOBHm_Chr6g0290951 |
| rosa_laevigata | RLG00000012162 |
| rosa_multiflora | Rmu_sc0001577.1_g000014 |
| rosa_roxburghii | Rroxscaffold_7G00176520 |
| rosa_rugosa | Rorug06G0216400 |
| rosa_samantha | Rh6AG326300 Rh6BG333900 Rh6CG340000 Rh6DG327200 |
| rosa_wichuraiana | Rw6G028370 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 81 |
| Acc16I | TGCGCA | 1 cut(s) | 69 |
| AclWI | GGATC | 2 cut(s) | 12, 403 |
| AcoI | YGGCCR | 1 cut(s) | 94 |
| AcuI | CTGAAG | 2 cut(s) | 296, 560 |
| AfaI | GTAC | 3 cut(s) | 204, 276, 432 |
| AflIII | ACRYGT | 1 cut(s) | 101 |
| AgsI | TTSAA | 3 cut(s) | 34, 242, 370 |
| AluBI | AGCT | 1 cut(s) | 556 |
| AluI | AGCT | 1 cut(s) | 556 |
| Alw26I | GTCTC | 1 cut(s) | 14 |
| AlwI | GGATC | 2 cut(s) | 12, 403 |
| AoxI | GGCC | 2 cut(s) | 94, 564 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 534, 566 |
| AspLEI | GCGC | 1 cut(s) | 70 |
| AsuC2I | CCSGG | 1 cut(s) | 423 |
| AsuHPI | GGTGA | 1 cut(s) | 527 |
| BalI | TGGCCA | 1 cut(s) | 96 |
| BauI | CACGAG | 1 cut(s) | 390 |
| BcnI | CCSGG | 1 cut(s) | 423 |
| BcoDI | GTCTC | 1 cut(s) | 14 |
| BglII | AGATCT | 1 cut(s) | 406 |
| Bme1390I | CCNGG | 1 cut(s) | 423 |
| BmiI | GGNNCC | 3 cut(s) | 304, 420, 522 |
| BmrFI | CCNGG | 1 cut(s) | 423 |
| BmsI | GCATC | 3 cut(s) | 55, 273, 477 |
| BpmI | CTGGAG | 1 cut(s) | 161 |
| BpuMI | CCSGG | 1 cut(s) | 423 |
| Bsa29I | ATCGAT | 1 cut(s) | 494 |
| BsaAI | YACGTR | 2 cut(s) | 104, 278 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 11, 41 |
| BseCI | ATCGAT | 1 cut(s) | 494 |
| BseGI | GGATG | 1 cut(s) | 468 |
| BseMII | CTCAG | 1 cut(s) | 154 |
| BseRI | GAGGAG | 1 cut(s) | 305 |
| BshFI | GGCC | 2 cut(s) | 96, 566 |
| BshVI | ATCGAT | 1 cut(s) | 494 |
| BsiSI | CCGG | 1 cut(s) | 422 |
| BslFI | GGGAC | 1 cut(s) | 148 |
| BsmAI | GTCTC | 1 cut(s) | 14 |
| BsmFI | GGGAC | 1 cut(s) | 148 |
| BsnI | GGCC | 2 cut(s) | 96, 566 |
| Bsp143I | GATC | 3 cut(s) | 4, 395, 406 |
| BspANI | GGCC | 2 cut(s) | 96, 566 |
| BspCNI | CTCAG | 1 cut(s) | 153 |
| BspDI | ATCGAT | 1 cut(s) | 494 |
| BspLI | GGNNCC | 3 cut(s) | 304, 420, 522 |
| BspPI | GGATC | 2 cut(s) | 12, 403 |
| BssMI | GATC | 3 cut(s) | 4, 395, 406 |
| BssSI | CACGAG | 1 cut(s) | 390 |
| Bst2BI | CACGAG | 1 cut(s) | 390 |
| Bst4CI | ACNGT | 1 cut(s) | 232 |
| BstBAI | YACGTR | 2 cut(s) | 104, 278 |
| BstDEI | CTNAG | 1 cut(s) | 140 |
| BstF5I | GGATG | 1 cut(s) | 468 |
| BstHHI | GCGC | 1 cut(s) | 70 |
| BstKTI | GATC | 3 cut(s) | 7, 398, 409 |
| BstMAI | GTCTC | 1 cut(s) | 14 |
| BstMBI | GATC | 3 cut(s) | 4, 395, 406 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 261, 474 |
| BstSCI | CCNGG | 1 cut(s) | 421 |
| BstSNI | TACGTA | 1 cut(s) | 278 |
| BstX2I | RGATCY | 2 cut(s) | 395, 406 |
| BstYI | RGATCY | 2 cut(s) | 395, 406 |
| Bsu15I | ATCGAT | 1 cut(s) | 494 |
| BsuRI | GGCC | 2 cut(s) | 96, 566 |
| BsuTUI | ATCGAT | 1 cut(s) | 494 |
| BtsCI | GGATG | 1 cut(s) | 468 |
| BtsI | GCAGTG | 1 cut(s) | 70 |
| BtsIMutI | CAGTG | 2 cut(s) | 70, 92 |
| CfoI | GCGC | 1 cut(s) | 70 |
| ClaI | ATCGAT | 1 cut(s) | 494 |
| Csp6I | GTAC | 3 cut(s) | 203, 275, 431 |
| CviJI | RGCY | 5 cut(s) | 96, 426, 539, 556, 566 |
| CviKI_1 | RGCY | 5 cut(s) | 96, 426, 539, 556, 566 |
| CviQI | GTAC | 3 cut(s) | 203, 275, 431 |
| DdeI | CTNAG | 1 cut(s) | 140 |
| DpnI | GATC | 3 cut(s) | 6, 397, 408 |
| DpnII | GATC | 3 cut(s) | 4, 395, 406 |
| EaeI | YGGCCR | 1 cut(s) | 94 |
| Eco105I | TACGTA | 1 cut(s) | 278 |
| Eco57I | CTGAAG | 2 cut(s) | 296, 560 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 343, 375 |
| FaqI | GGGAC | 1 cut(s) | 148 |
| FokI | GGATG | 1 cut(s) | 455 |
| FspAI | RTGCGCAY | 1 cut(s) | 69 |
| FspI | TGCGCA | 1 cut(s) | 69 |
| GlaI | GCGC | 1 cut(s) | 69 |
| GsuI | CTGGAG | 1 cut(s) | 161 |
| HaeIII | GGCC | 2 cut(s) | 96, 566 |
| HapII | CCGG | 1 cut(s) | 422 |
| HhaI | GCGC | 1 cut(s) | 70 |
| Hin6I | GCGC | 1 cut(s) | 68 |
| HinP1I | GCGC | 1 cut(s) | 68 |
| HinfI | GANTC | 3 cut(s) | 293, 354, 496 |
| HpaII | CCGG | 1 cut(s) | 422 |
| HphI | GGTGA | 1 cut(s) | 527 |
| Hpy188I | TCNGA | 3 cut(s) | 172, 315, 331 |
| Hpy188III | TCNNGA | 3 cut(s) | 338, 500, 578 |
| HpyAV | CCTTC | 1 cut(s) | 584 |
| HpyCH4III | ACNGT | 1 cut(s) | 232 |
| HpyCH4IV | ACGT | 3 cut(s) | 103, 126, 277 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 261, 474 |
| HpyF3I | CTNAG | 1 cut(s) | 140 |
| HpySE526I | ACGT | 3 cut(s) | 103, 126, 277 |
| HspAI | GCGC | 1 cut(s) | 68 |
| Kzo9I | GATC | 3 cut(s) | 4, 395, 406 |
| LpnPI | CCDG | 8 cut(s) | 110, 191, 194, 319, 435, 485, 497, 563 |
| LweI | GCATC | 3 cut(s) | 55, 273, 477 |
| MaeII | ACGT | 3 cut(s) | 103, 126, 277 |
| MaeIII | GTNAC | 1 cut(s) | 226 |
| MalI | GATC | 3 cut(s) | 6, 397, 408 |
| MboI | GATC | 3 cut(s) | 4, 395, 406 |
| MboII | GAAGA | 1 cut(s) | 557 |
| MflI | RGATCY | 2 cut(s) | 395, 406 |
| MlsI | TGGCCA | 1 cut(s) | 96 |
| MluCI | AATT | 7 cut(s) | 134, 158, 257, 341, 365, 378, 559 |
| MluNI | TGGCCA | 1 cut(s) | 96 |
| MlyI | GAGTC | 1 cut(s) | 302 |
| MnlI | CCTC | 4 cut(s) | 283, 386, 511, 577 |
| Mox20I | TGGCCA | 1 cut(s) | 96 |
| MscI | TGGCCA | 1 cut(s) | 96 |
| MseI | TTAA | 1 cut(s) | 381 |
| Msp20I | TGGCCA | 1 cut(s) | 96 |
| MspI | CCGG | 1 cut(s) | 422 |
| MspR9I | CCNGG | 1 cut(s) | 423 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 261, 474 |
| NciI | CCSGG | 1 cut(s) | 423 |
| NdeII | GATC | 3 cut(s) | 4, 395, 406 |
| NlaIV | GGNNCC | 3 cut(s) | 304, 420, 522 |
| NmuCI | GTSAC | 1 cut(s) | 226 |
| NsbI | TGCGCA | 1 cut(s) | 69 |
| PfeI | GAWTC | 2 cut(s) | 354, 496 |
| PleI | GAGTC | 1 cut(s) | 301 |
| PpsI | GAGTC | 1 cut(s) | 301 |
| Ppu21I | YACGTR | 2 cut(s) | 104, 278 |
| PsiI | TTATAA | 1 cut(s) | 81 |
| PspN4I | GGNNCC | 3 cut(s) | 304, 420, 522 |
| PsuI | RGATCY | 2 cut(s) | 395, 406 |
| RsaI | GTAC | 3 cut(s) | 204, 276, 432 |
| RsaNI | GTAC | 3 cut(s) | 203, 275, 431 |
| SaqAI | TTAA | 1 cut(s) | 381 |
| Sau3AI | GATC | 3 cut(s) | 4, 395, 406 |
| SchI | GAGTC | 1 cut(s) | 302 |
| ScrFI | CCNGG | 1 cut(s) | 423 |
| SetI | ASST | 7 cut(s) | 41, 106, 129, 226, 280, 517, 558 |
| SfaNI | GCATC | 3 cut(s) | 55, 273, 477 |
| SnaBI | TACGTA | 1 cut(s) | 278 |
| Sse9I | AATT | 7 cut(s) | 134, 158, 257, 341, 365, 378, 559 |
| StyD4I | CCNGG | 1 cut(s) | 421 |
| TaaI | ACNGT | 1 cut(s) | 232 |
| TaiI | ACGT | 3 cut(s) | 106, 129, 280 |
| TaqI | TCGA | 2 cut(s) | 7, 494 |
| TasI | AATT | 7 cut(s) | 134, 158, 257, 341, 365, 378, 559 |
| TatI | WGTACW | 2 cut(s) | 202, 430 |
| TfiI | GAWTC | 2 cut(s) | 354, 496 |
| Tru1I | TTAA | 1 cut(s) | 381 |
| Tru9I | TTAA | 1 cut(s) | 381 |
| TscAI | CASTG | 2 cut(s) | 77, 92 |
| TseFI | GTSAC | 1 cut(s) | 226 |
| Tsp45I | GTSAC | 1 cut(s) | 226 |
| TspDTI | ATGAA | 1 cut(s) | 390 |
| TspGWI | ACGGA | 1 cut(s) | 465 |
| TspRI | CASTG | 2 cut(s) | 77, 92 |