Rh6DG416300

No description available

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6D
Physical Location & Seq
Forward (+)
60014452 .. 60015451
1000 bp
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UTR
Exon/CDS
Intron
Rh6DG416300.1

Sequence Viewer

Length: 207 bp
ATGGGCTCACTAGTGCCAGGATGGAAATCAAAGTCAGATATATACGAGAGGAATCATTCACTCACAAACGACGAGATTGAAGCCTTCTGGAGATCACATAAGAAACCAGACGAGAAACAACATATCATCGATGGTGATACCATCATCTATGAGGTTTTGTTGGGACTAATCATCAGCTACTCTGCATATGAGGGTTGTGTTAATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

68

Amino Acids

7.81

Weight (kDa)

5.15

Isoelectric Point (pI)

34.42

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0013191)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AgsI TTSAA 1 cut(s) 80
AhlI ACTAGT 1 cut(s) 10
AjnI CCWGG 1 cut(s) 16
AluBI AGCT 1 cut(s) 177
AluI AGCT 1 cut(s) 177
AsuHPI GGTGA 1 cut(s) 146
BanII GRGCYC 1 cut(s) 8
BccI CCATC 3 cut(s) 15, 125, 149
BciT130I CCWGG 1 cut(s) 18
BcuI ACTAGT 1 cut(s) 10
BfaI CTAG 1 cut(s) 11
Bme1390I CCNGG 1 cut(s) 18
BmrFI CCNGG 1 cut(s) 18
BpmI CTGGAG 1 cut(s) 109
Bsa29I ATCGAT 1 cut(s) 129
BsaBI GATNNNNATC 1 cut(s) 25
Bse8I GATNNNNATC 1 cut(s) 25
BseBI CCWGG 1 cut(s) 18
BseCI ATCGAT 1 cut(s) 129
BseGI GGATG 1 cut(s) 26
BseJI GATNNNNATC 1 cut(s) 25
BshVI ATCGAT 1 cut(s) 129
BslFI GGGAC 1 cut(s) 177
BsmFI GGGAC 1 cut(s) 177
Bsp1286I GDGCHC 1 cut(s) 8
Bsp143I GATC 1 cut(s) 92
BspDI ATCGAT 1 cut(s) 129
BssMI GATC 1 cut(s) 92
Bst2UI CCWGG 1 cut(s) 18
BstF5I GGATG 1 cut(s) 26
BstKTI GATC 1 cut(s) 95
BstMBI GATC 1 cut(s) 92
BstNI CCWGG 1 cut(s) 18
BstSCI CCNGG 1 cut(s) 16
Bsu15I ATCGAT 1 cut(s) 129
BsuTUI ATCGAT 1 cut(s) 129
BtsCI GGATG 1 cut(s) 26
ClaI ATCGAT 1 cut(s) 129
CviJI RGCY 3 cut(s) 6, 83, 177
CviKI_1 RGCY 3 cut(s) 6, 83, 177
DpnI GATC 1 cut(s) 94
DpnII GATC 1 cut(s) 92
Eco24I GRGCYC 1 cut(s) 8
EcoRII CCWGG 1 cut(s) 16
EcoT38I GRGCYC 1 cut(s) 8
FaiI YATR 7 cut(s) 41, 43, 99, 123, 150, 187, 189
FaqI GGGAC 1 cut(s) 177
FauNDI CATATG 1 cut(s) 187
FokI GGATG 1 cut(s) 33
FriOI GRGCYC 1 cut(s) 8
FspBI CTAG 1 cut(s) 11
GsuI CTGGAG 1 cut(s) 109
HinfI GANTC 1 cut(s) 52
HphI GGTGA 1 cut(s) 146
Hpy188I TCNGA 1 cut(s) 37
Hpy188III TCNNGA 1 cut(s) 88
Hpy99I CGWCG 1 cut(s) 74
HpyAV CCTTC 1 cut(s) 94
HpyCH4V TGCA 1 cut(s) 185
Kzo9I GATC 1 cut(s) 92
LpnPI CCDG 4 cut(s) 3, 30, 73, 120
MaeI CTAG 1 cut(s) 11
MalI GATC 1 cut(s) 94
MboI GATC 1 cut(s) 92
MhlI GDGCHC 1 cut(s) 8
MluCI AATT 1 cut(s) 202
MnlI CCTC 3 cut(s) 42, 145, 184
MseI TTAA 2 cut(s) 201, 205
MspR9I CCNGG 1 cut(s) 18
MvaI CCWGG 1 cut(s) 18
NdeI CATATG 1 cut(s) 187
NdeII GATC 1 cut(s) 92
PacI TTAATTAA 1 cut(s) 205
PfeI GAWTC 1 cut(s) 52
Psp6I CCWGG 1 cut(s) 16
PspGI CCWGG 1 cut(s) 16
SaqAI TTAA 2 cut(s) 201, 205
Sau3AI GATC 1 cut(s) 92
ScrFI CCNGG 1 cut(s) 18
SduI GDGCHC 1 cut(s) 8
SetI ASST 2 cut(s) 156, 179
SgeI CNNG 8 cut(s) 23, 29, 30, 58, 85, 100, 119, 124
SpeI ACTAGT 1 cut(s) 10
Sse9I AATT 1 cut(s) 202
SspMI CTAG 1 cut(s) 11
StyD4I CCNGG 1 cut(s) 16
TaqI TCGA 1 cut(s) 129
TasI AATT 1 cut(s) 202
TfiI GAWTC 1 cut(s) 52
Tru1I TTAA 2 cut(s) 201, 205
Tru9I TTAA 2 cut(s) 201, 205
XspI CTAG 1 cut(s) 11
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.