Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6D

Orthogroup ID

OG0005828

Physical Location & Seq

Genomic Coordinates Forward (+)

61890627 .. 61894785

Gene Structure 4159 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6DG444000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1818 bp

ATGGGTTGCGCTTCCAAGTCCTTGTTCACCCAAGGAAGCACTATCCATTTCCCACCTCCACCGCGTCCCTACGCCGCCGCCGCCGCGGCGCCATGCTCCTCTCCTCTAAAATCAACTCCACTCTTCTCTTCCCTCCGTCTCACTTCACCGCCACAGTTTCGCTCTCACGTCCTGCCGCCTTTAACACATTTACTCACTGCACCCGCTCTCCTGCCGGTTAGCGGCGGCTCCGACGCCGGAGACAACAACAATGCCGGCGGCGGCGGCGGTTGGAATAATCCATTCGACTCATCGTCCTCATGGTGGTGGCATGACGACGACGACAACGACAACGGTGGTGGATCTCATAACCTCATTTTGTTCTCGTCTATATTGTTGGCCTCCGTGACGTGTTGCTTGTGCCAGCTCAGGCTGGCGTATGCCCTAGCGTCGGAGGAGGAGGATGTTGAGTCTGTGTGGGAAGTGAGGGGAGGCAAGTGGACAAAGCTCGTTCCTGATTTTGTGAGGGACGGCTTTGTTGCTGCTAATGGCGGTGGCTTGGCTTCAGTAAGCTTTGGGAGTCTTTGGCTGCAATGCAAGAATCTGTTTGTGCAATTGATGCTTCCAGAAGGCTTTCCTCATAGTGTTACTAGTGATTATCTGGACTACTCTCTCTGGAGAGCAGTTCAGGGCGTCGCTAGCCAAGTCAGTGGTGTGCTTGCCACACAGGCTTTGCTTTATGCTGTTGGATTGGGGAAAGGAGCTATTCCTACAGCTGCGGCGGTGAATTGGGTGCTTAAGGATGGGATTGGATACCTGAGCAAGATTATGCTCTCGAAATATGGGAGGCATTTTGATGTCAATCCGAAAGGGTGGAGGCTGTTTGCTGATCTTATGGAAAATGCTGCTTTTGGAATGGAAATGCTCACTCCTGCATTTCCCAATTATTTTCTCTTGATTGGTGCTGCTGCCGGCGCAGGGCGCTCAGCTGCTGCACTTATCCAGGCTGCTACCAGGAGCTGTTTCTATGCTGGTTTTGCTGCTCAGAGGAACTTTGCTGAGGTTATTGCTAAGGGTGAAGCTCAGGGAATGGTGAGCAAGTTTATCGGTATCATGCTTGGTATAGCATTGGCTAACCAGATAGGATCTTCTACGTCTCTTGGCCTAGCTTCTTTTAGTGTGGTCACTTGCATCCACATGTTCTGCAATCTGAAATCGTATCAAGCCATTCAAATAAGGACTTTAAATCCTTATCGTGCAAGTTTGGTTTTCAGCGAATATCTGCTTAGTGGCCAAGCACCTCCTGTCAAAGAGGTGAACGAGGAGGAACCGCTTTTTCCAGCTGTACCGTTTCTTAACTGGAAGCCAGCAAACAGAGCACCGCCAACAGTATTATCTTCAGAAGCGAAGGATGCAGCTGCTGAAATTGAGCAGAGGCTGCAGTTGGGATCCAAGCTCAGTGATCTAATCAACAACAAGGAGGATGTGCTTGCACTGTTCAGTTTATTTAAAGAAGAAGGCTATATTTTGACTGAACACAGGGGAAGATACTGTGTGGTTCTTAAAGAAACATCTTCACTACAAGACATGCTCAAAGCACTGTTCCATGTCAATTATCTGTATTGGTTGGAGAAGAATGCCGGATATGAAGCAAAAGGAACTTCCATTGACTGCAGACCAGGTGGAAGACTGGAAATGTCTCTAGATTATGTGCGGAGGGAGTTCGACCACGTCAAAACTGATGGGGAATCAGCGGGTTGGGTTACAGATGGTCTTATTGCAAGACCTGCACCTAATAGAATTCGTCCGGGTTATGAGGCCTCATCAGTTGCTTGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0008150 GO:0009314 GO:0009411 GO:0009416 GO:0009507 GO:0009526 GO:0009536 GO:0009628 GO:0009941 GO:0010224 GO:0031967 GO:0031975 GO:0032502 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0050896

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF647

Protein Analysis

605

Amino Acids

65.31

Weight (kDa)

6.16

Isoelectric Point (pI)

41.56

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
UVB_sens_prot	PF04884	191 - 422	1.4e-77	Vitamin B6 photo-protection and homoeostasis domain
UVB_sens_C	PF24160	471 - 583	6.7e-07	Root UVB sensitive protein, C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0005828)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G45890
fragaria_vesca	FvH4_2g37260 FvH4_2g37260 FvH4_2g37260 FvH4_2g37260 FvH4_2g37260 FvH4_2g37260 FvH4_2g37260 FvH4_2g37260
malus_domestica	MD08G1000800.v1.1
prunus_persica	Prupe.1G352800_v2.0.a1
pyrus_communis	pycom08g00030
rosa_chinensis	RchiOBHm_Chr6g0304441 RchiOBHm_Chr6g0304461
rosa_laevigata	RLG00000010975 RLG00000010978
rosa_multiflora	Rmu_ssc0000218.1_g000052
rosa_roxburghii	Rroxscaffold_7G00163730
rosa_rugosa	Rorug06G0331800 Rorug06G0331900
rosa_samantha	Rh6AG444500 Rh6AG444700 Rh6BG457700 Rh6BG457900 Rh6CG457300 Rh6DG444000 Rh6DG444200
rosa_wichuraiana	Rw6G038590

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1774
AccB1I	GGYRCC	1 cut(s)	88
AccBSI	CCGCTC	1 cut(s)	206
AccII	CGCG	2 cut(s)	64, 86
AclWI	GGATC	4 cut(s)	349, 1132, 1422, 1435
AcoI	YGGCCR	1 cut(s)	1270
AcsI	RAATTY	1 cut(s)	1779
AcuI	CTGAAG	2 cut(s)	528, 1362
AcyI	GRCGYC	3 cut(s)	89, 234, 672
AfaI	GTAC	1 cut(s)	1326
AfiI	CCNNNNNNNGG	4 cut(s)	221, 303, 430, 957
AflII	CTTAAG	1 cut(s)	776
AflIII	ACRYGT	2 cut(s)	389, 1176
AgsI	TTSAA	1 cut(s)	1211
AhdI	GACNNNNNGTC	1 cut(s)	292
AhlI	ACTAGT	1 cut(s)	629
AjiI	CACGTC	3 cut(s)	169, 390, 1711
AjnI	CCWGG	3 cut(s)	981, 992, 1657
AjuI	GAANNNNNNNTTGG	2 cut(s)	8, 40
Alw21I	GWGCWC	1 cut(s)	1360
Alw26I	GTCTC	4 cut(s)	143, 234, 1140, 1683
AlwI	GGATC	4 cut(s)	349, 1132, 1422, 1435
AlwNI	CAGNNNCTG	4 cut(s)	971, 999, 1400, 1417
AoxI	GGCC	4 cut(s)	378, 1141, 1270, 1797
ApoI	RAATTY	1 cut(s)	1779
Asp700I	GAANNNNTTC	1 cut(s)	612
AspLEI	GCGC	4 cut(s)	11, 91, 956, 963
AsuC2I	CCSGG	1 cut(s)	1788
AsuHPI	GGTGA	6 cut(s)	19, 138, 775, 1067, 1084, 1306
AsuNHI	GCTAGC	1 cut(s)	677
BalI	TGGCCA	1 cut(s)	1272
BamHI	GGATCC	1 cut(s)	1427
BanI	GGYRCC	1 cut(s)	88
BbsI	GAAGAC	1 cut(s)	1672
Bbv12I	GWGCWC	1 cut(s)	1360
BbvCI	CCTCAGC	1 cut(s)	1038
BccI	CCATC	3 cut(s)	776, 1715, 1742
BceAI	ACGGC	1 cut(s)	526
BcgI	CGANNNNNNTGC	2 cut(s)	1066, 1100
BciT130I	CCWGG	3 cut(s)	983, 994, 1659
BciVI	GTATCC	1 cut(s)	785
BcnI	CCSGG	1 cut(s)	1788
BcoDI	GTCTC	4 cut(s)	143, 234, 1140, 1683
BcuI	ACTAGT	1 cut(s)	629
BfaI	CTAG	5 cut(s)	425, 630, 678, 1145, 1682
BfmI	CTRYAG	3 cut(s)	750, 1418, 1651
BfoI	RGCGCY	2 cut(s)	92, 964
BfrI	CTTAAG	1 cut(s)	776
BfuAI	ACCTGC	1 cut(s)	1774
BfuI	GTATCC	1 cut(s)	785
BglI	GCCNNNNNGGC	2 cut(s)	86, 707
BlpI	GCTNAGC	1 cut(s)	964
Bme1390I	CCNGG	4 cut(s)	983, 994, 1659, 1788
BmeRI	GACNNNNNGTC	1 cut(s)	292
BmgBI	CACGTC	3 cut(s)	169, 390, 1711
BmiI	GGNNCC	4 cut(s)	90, 229, 1308, 1429
BmrFI	CCNGG	4 cut(s)	983, 994, 1659, 1788
BmsI	GCATC	3 cut(s)	588, 1179, 1381
BmtI	GCTAGC	1 cut(s)	681
BpiI	GAAGAC	1 cut(s)	1672
BpmI	CTGGAG	1 cut(s)	676
Bpu10I	CCTNAGC	5 cut(s)	407, 797, 1038, 1050, 1062
Bpu1102I	GCTNAGC	1 cut(s)	964
BpuMI	CCSGG	1 cut(s)	1788
BsaBI	GATNNNNATC	1 cut(s)	840
BsaHI	GRCGYC	3 cut(s)	89, 234, 672
BsaJI	CCNNGG	2 cut(s)	31, 84
BsaXI	ACNNNNNCTCC	2 cut(s)	192, 222
Bsc4I	CCNNNNNNNGG	4 cut(s)	221, 303, 430, 957
Bse118I	RCCGGY	3 cut(s)	214, 254, 950
Bse1I	ACTGG	2 cut(s)	1343, 1674
Bse3DI	GCAATG	1 cut(s)	578
Bse8I	GATNNNNATC	1 cut(s)	840
BseBI	CCWGG	3 cut(s)	983, 994, 1659
BseDI	CCNNGG	2 cut(s)	31, 84
BseGI	GGATG	5 cut(s)	448, 787, 1170, 1396, 1468
BseJI	GATNNNNATC	1 cut(s)	840
BseLI	CCNNNNNNNGG	4 cut(s)	221, 303, 430, 957
BseMI	GCAATG	1 cut(s)	578
BseMII	CTCAG	7 cut(s)	421, 788, 978, 1029, 1037, 1076, 1450
BseNI	ACTGG	2 cut(s)	1343, 1674
BseRI	GAGGAG	5 cut(s)	88, 93, 449, 452, 1316
BsgI	GTGCAG	3 cut(s)	183, 957, 1752
Bsh1236I	CGCG	2 cut(s)	64, 86
BshFI	GGCC	4 cut(s)	380, 1143, 1272, 1799
BshNI	GGYRCC	1 cut(s)	88
BsiHKAI	GWGCWC	1 cut(s)	1360
BsiSI	CCGG	6 cut(s)	215, 237, 255, 951, 1620, 1787
BslFI	GGGAC	2 cut(s)	51, 521
BslI	CCNNNNNNNGG	4 cut(s)	221, 303, 430, 957
BsmAI	GTCTC	4 cut(s)	143, 234, 1140, 1683
BsmBI	CGTCTC	2 cut(s)	143, 1140
BsmFI	GGGAC	2 cut(s)	51, 521
BsmI	GAATGC	1 cut(s)	1621
BsnI	GGCC	4 cut(s)	380, 1143, 1272, 1799
Bsp1286I	GDGCHC	1 cut(s)	1360
Bsp143I	GATC	5 cut(s)	341, 868, 1124, 1427, 1441
Bsp1720I	GCTNAGC	1 cut(s)	964
BspANI	GGCC	4 cut(s)	380, 1143, 1272, 1799
BspCNI	CTCAG	7 cut(s)	420, 789, 977, 1030, 1036, 1075, 1449
BspFNI	CGCG	2 cut(s)	64, 86
BspLI	GGNNCC	4 cut(s)	90, 229, 1308, 1429
BspMAI	CTGCAG	2 cut(s)	1422, 1655
BspMI	ACCTGC	1 cut(s)	1774
BspOI	GCTAGC	1 cut(s)	681
BspPI	GGATC	4 cut(s)	349, 1132, 1422, 1435
BspT107I	GGYRCC	1 cut(s)	88
BspTI	CTTAAG	1 cut(s)	776
BsrBI	CCGCTC	1 cut(s)	206
BsrDI	GCAATG	1 cut(s)	578
BsrFI	RCCGGY	3 cut(s)	214, 254, 950
BsrI	ACTGG	2 cut(s)	1343, 1674
BssAI	RCCGGY	3 cut(s)	214, 254, 950
BssECI	CCNNGG	2 cut(s)	31, 84
BssMI	GATC	5 cut(s)	341, 868, 1124, 1427, 1441
BssNI	GRCGYC	3 cut(s)	89, 234, 672
BssT1I	CCWWGG	1 cut(s)	31
Bst2UI	CCWGG	3 cut(s)	983, 994, 1659
Bst4CI	ACNGT	7 cut(s)	156, 335, 1329, 1369, 1476, 1532, 1581
Bst6I	CTCTTC	2 cut(s)	128, 133
BstACI	GRCGYC	3 cut(s)	89, 234, 672
BstAFI	CTTAAG	1 cut(s)	776
BstAPI	GCANNNNNTGC	3 cut(s)	598, 1417, 1766
BstC8I	GCNNGC	9 cut(s)	256, 404, 414, 679, 699, 952, 1347, 1470, 1813
BstDEI	CTNAG	9 cut(s)	407, 797, 964, 1023, 1038, 1050, 1062, 1265, 1436
BstDSI	CCRYGG	1 cut(s)	84
BstF5I	GGATG	5 cut(s)	448, 787, 1170, 1396, 1468
BstFNI	CGCG	2 cut(s)	64, 86
BstH2I	RGCGCY	2 cut(s)	92, 964
BstHHI	GCGC	4 cut(s)	11, 91, 956, 963
BstKTI	GATC	5 cut(s)	344, 871, 1127, 1430, 1444
BstMAI	GTCTC	4 cut(s)	143, 234, 1140, 1683
BstMBI	GATC	5 cut(s)	341, 868, 1124, 1427, 1441
BstNI	CCWGG	3 cut(s)	983, 994, 1659
BstNSI	RCATGY	2 cut(s)	1180, 1570
BstSCI	CCNGG	4 cut(s)	981, 992, 1657, 1786
BstSFI	CTRYAG	3 cut(s)	750, 1418, 1651
BstUI	CGCG	2 cut(s)	64, 86
BstV2I	GAAGAC	1 cut(s)	1672
BstX2I	RGATCY	3 cut(s)	341, 1124, 1427
BstXI	CCANNNNNNTGG	1 cut(s)	689
BstYI	RGATCY	3 cut(s)	341, 1124, 1427
BsuI	GTATCC	1 cut(s)	785
BsuRI	GGCC	4 cut(s)	380, 1143, 1272, 1799
BtgI	CCRYGG	1 cut(s)	84
BtrI	CACGTC	3 cut(s)	169, 390, 1711
BtsCI	GGATG	5 cut(s)	448, 787, 1170, 1396, 1468
BtsI	GCAGTG	1 cut(s)	195
BtsIMutI	CAGTG	5 cut(s)	195, 694, 1444, 1472, 1577
BveI	ACCTGC	1 cut(s)	1774
Cac8I	GCNNGC	9 cut(s)	256, 404, 414, 679, 699, 952, 1347, 1470, 1813
CaiI	CAGNNNCTG	4 cut(s)	971, 999, 1400, 1417
CfoI	GCGC	4 cut(s)	11, 91, 956, 963
Cfr10I	RCCGGY	3 cut(s)	214, 254, 950
Cfr42I	CCGCGG	1 cut(s)	87
CseI	GACGC	4 cut(s)	53, 242, 417, 661
CsiI	ACCWGGT	1 cut(s)	1657
Csp6I	GTAC	1 cut(s)	1325
CspCI	CAANNNNNGTGG	2 cut(s)	319, 354
CviAII	CATG	7 cut(s)	93, 300, 311, 1093, 1177, 1567, 1586
CviQI	GTAC	1 cut(s)	1325
DdeI	CTNAG	9 cut(s)	407, 797, 964, 1023, 1038, 1050, 1062, 1265, 1436
DinI	GGCGCC	1 cut(s)	90
DpnI	GATC	5 cut(s)	343, 870, 1126, 1429, 1443
DpnII	GATC	5 cut(s)	341, 868, 1124, 1427, 1441
DraI	TTTAAA	2 cut(s)	1224, 1489
DriI	GACNNNNNGTC	1 cut(s)	292
EaeI	YGGCCR	1 cut(s)	1270
Eam1104I	CTCTTC	2 cut(s)	128, 133
Eam1105I	GACNNNNNGTC	1 cut(s)	292
EarI	CTCTTC	2 cut(s)	128, 133
Eco130I	CCWWGG	1 cut(s)	31
Eco147I	AGGCCT	1 cut(s)	1799
Eco57I	CTGAAG	2 cut(s)	528, 1362
EcoRI	GAATTC	1 cut(s)	1779
EcoRII	CCWGG	3 cut(s)	981, 992, 1657
EcoT14I	CCWWGG	1 cut(s)	31
EgeI	GGCGCC	1 cut(s)	90
EheI	GGCGCC	1 cut(s)	90
ErhI	CCWWGG	1 cut(s)	31
Esp3I	CGTCTC	2 cut(s)	143, 1140
FaeI	CATG	7 cut(s)	96, 303, 314, 1096, 1180, 1570, 1589
FaqI	GGGAC	2 cut(s)	51, 521
FatI	CATG	7 cut(s)	92, 299, 310, 1092, 1176, 1566, 1585
FauI	CCCGC	2 cut(s)	211, 1726
FokI	GGATG	5 cut(s)	455, 794, 1157, 1403, 1475
FspBI	CTAG	5 cut(s)	425, 630, 678, 1145, 1682
GlaI	GCGC	4 cut(s)	10, 90, 955, 962
GsuI	CTGGAG	1 cut(s)	676
HaeII	RGCGCY	2 cut(s)	92, 964
HaeIII	GGCC	4 cut(s)	380, 1143, 1272, 1799
HapII	CCGG	6 cut(s)	215, 237, 255, 951, 1620, 1787
HgaI	GACGC	4 cut(s)	53, 242, 417, 661
HhaI	GCGC	4 cut(s)	11, 91, 956, 963
Hin1I	GRCGYC	3 cut(s)	89, 234, 672
Hin1II	CATG	7 cut(s)	96, 303, 314, 1096, 1180, 1570, 1589
Hin6I	GCGC	4 cut(s)	9, 89, 954, 961
HinP1I	GCGC	4 cut(s)	9, 89, 954, 961
HindIII	AAGCTT	1 cut(s)	550
HinfI	GANTC	5 cut(s)	287, 449, 559, 580, 1727
HpaII	CCGG	6 cut(s)	215, 237, 255, 951, 1620, 1787
HphI	GGTGA	6 cut(s)	19, 138, 775, 1067, 1084, 1306
Hpy166II	GTNNAC	3 cut(s)	27, 480, 1297
Hpy188I	TCNGA	6 cut(s)	232, 433, 846, 1026, 1191, 1381
Hpy188III	TCNNGA	7 cut(s)	494, 605, 641, 655, 814, 934, 1682
Hpy8I	GTNNAC	3 cut(s)	27, 480, 1297
Hpy99I	CGWCG	5 cut(s)	236, 320, 323, 433, 677
HpyAV	CCTTC	3 cut(s)	602, 1381, 1490
HpyCH4III	ACNGT	7 cut(s)	156, 335, 1329, 1369, 1476, 1532, 1581
HpyCH4IV	ACGT	4 cut(s)	168, 389, 1133, 1710
HpyF3I	CTNAG	9 cut(s)	407, 797, 964, 1023, 1038, 1050, 1062, 1265, 1436
HpySE526I	ACGT	4 cut(s)	168, 389, 1133, 1710
Hsp92I	GRCGYC	3 cut(s)	89, 234, 672
Hsp92II	CATG	7 cut(s)	96, 303, 314, 1096, 1180, 1570, 1589
HspAI	GCGC	4 cut(s)	9, 89, 954, 961
KasI	GGCGCC	1 cut(s)	88
KroI	GCCGGC	2 cut(s)	254, 950
KroNI	GCCGGC	2 cut(s)	256, 952
KspI	CCGCGG	1 cut(s)	87
Kzo9I	GATC	5 cut(s)	341, 868, 1124, 1427, 1441
LmnI	GCTCC	4 cut(s)	101, 233, 740, 996
LweI	GCATC	3 cut(s)	588, 1179, 1381
MabI	ACCWGGT	1 cut(s)	1657
MaeI	CTAG	5 cut(s)	425, 630, 678, 1145, 1682
MaeII	ACGT	4 cut(s)	168, 389, 1133, 1710
MaeIII	GTNAC	4 cut(s)	385, 625, 1162, 1741
MalI	GATC	5 cut(s)	343, 870, 1126, 1429, 1443
MbiI	CCGCTC	1 cut(s)	206
MboI	GATC	5 cut(s)	341, 868, 1124, 1427, 1441
MboII	GAAGA	9 cut(s)	115, 120, 1119, 1368, 1505, 1536, 1545, 1624, 1677
MfeI	CAATTG	1 cut(s)	593
MflI	RGATCY	3 cut(s)	341, 1124, 1427
MhlI	GDGCHC	1 cut(s)	1360
MlsI	TGGCCA	1 cut(s)	1272
MluCI	AATT	6 cut(s)	593, 766, 922, 1404, 1591, 1779
MluNI	TGGCCA	1 cut(s)	1272
Mly113I	GGCGCC	1 cut(s)	89
MlyI	GAGTC	3 cut(s)	281, 458, 568
MmeI	TCCRAC	5 cut(s)	251, 255, 411, 706, 1587
Mox20I	TGGCCA	1 cut(s)	1272
MroNI	GCCGGC	2 cut(s)	254, 950
MroXI	GAANNNNTTC	1 cut(s)	612
MscI	TGGCCA	1 cut(s)	1272
MseI	TTAA	6 cut(s)	182, 777, 1223, 1335, 1488, 1542
MslI	CAYNNNNRTG	3 cut(s)	304, 834, 1175
Msp20I	TGGCCA	1 cut(s)	1272
MspA1I	CMGCKG	6 cut(s)	86, 755, 968, 1322, 1397, 1733
MspCI	CTTAAG	1 cut(s)	776
MspI	CCGG	6 cut(s)	215, 237, 255, 951, 1620, 1787
MspR9I	CCNGG	4 cut(s)	983, 994, 1659, 1788
MunI	CAATTG	1 cut(s)	593
Mva1269I	GAATGC	1 cut(s)	1621
MvaI	CCWGG	3 cut(s)	983, 994, 1659
MvnI	CGCG	2 cut(s)	64, 86
NaeI	GCCGGC	2 cut(s)	256, 952
NarI	GGCGCC	1 cut(s)	89
NciI	CCSGG	1 cut(s)	1788
NdeII	GATC	5 cut(s)	341, 868, 1124, 1427, 1441
NgoMIV	GCCGGC	2 cut(s)	254, 950
NheI	GCTAGC	1 cut(s)	677
NlaIII	CATG	7 cut(s)	96, 303, 314, 1096, 1180, 1570, 1589
NlaIV	GGNNCC	4 cut(s)	90, 229, 1308, 1429
NmuCI	GTSAC	2 cut(s)	385, 1162
NspI	RCATGY	2 cut(s)	1180, 1570
PceI	AGGCCT	1 cut(s)	1799
PciI	ACATGT	1 cut(s)	1176
PcsI	WCGNNNNNNNCGW	1 cut(s)	324
PctI	GAATGC	1 cut(s)	1621
PdiI	GCCGGC	2 cut(s)	256, 952
PdmI	GAANNNNTTC	1 cut(s)	612
PfeI	GAWTC	2 cut(s)	580, 1727
PflFI	GACNNNGTC	1 cut(s)	1709
PleI	GAGTC	3 cut(s)	281, 457, 567
PluTI	GGCGCC	1 cut(s)	92
PpsI	GAGTC	3 cut(s)	281, 457, 567
PscI	ACATGT	1 cut(s)	1176
Psp6I	CCWGG	3 cut(s)	981, 992, 1657
PspGI	CCWGG	3 cut(s)	981, 992, 1657
PspN4I	GGNNCC	4 cut(s)	90, 229, 1308, 1429
PstI	CTGCAG	2 cut(s)	1422, 1655
PstNI	CAGNNNCTG	4 cut(s)	971, 999, 1400, 1417
PsuI	RGATCY	3 cut(s)	341, 1124, 1427
PsyI	GACNNNGTC	1 cut(s)	1709
PvuII	CAGCTG	4 cut(s)	755, 968, 1322, 1397
RsaI	GTAC	1 cut(s)	1326
RsaNI	GTAC	1 cut(s)	1325
RseI	CAYNNNNRTG	3 cut(s)	304, 834, 1175
SacII	CCGCGG	1 cut(s)	87
SaqAI	TTAA	6 cut(s)	182, 777, 1223, 1335, 1488, 1542
Sau3AI	GATC	5 cut(s)	341, 868, 1124, 1427, 1441
SchI	GAGTC	3 cut(s)	281, 458, 568
ScrFI	CCNGG	4 cut(s)	983, 994, 1659, 1788
SduI	GDGCHC	1 cut(s)	1360
SexAI	ACCWGGT	1 cut(s)	1657
SfaNI	GCATC	3 cut(s)	588, 1179, 1381
SfcI	CTRYAG	3 cut(s)	750, 1418, 1651
SfoI	GGCGCC	1 cut(s)	90
Sfr303I	CCGCGG	1 cut(s)	87
SgrBI	CCGCGG	1 cut(s)	87
SmiMI	CAYNNNNRTG	3 cut(s)	304, 834, 1175
SmlI	CTYRAG	1 cut(s)	776
SmoI	CTYRAG	1 cut(s)	776
SpeI	ACTAGT	1 cut(s)	629
Sse9I	AATT	6 cut(s)	593, 766, 922, 1404, 1591, 1779
SseBI	AGGCCT	1 cut(s)	1799
SspDI	GGCGCC	1 cut(s)	88
SspMI	CTAG	5 cut(s)	425, 630, 678, 1145, 1682
StuI	AGGCCT	1 cut(s)	1799
StyD4I	CCNGG	4 cut(s)	981, 992, 1657, 1786
StyI	CCWWGG	1 cut(s)	31
TaaI	ACNGT	7 cut(s)	156, 335, 1329, 1369, 1476, 1532, 1581
TaiI	ACGT	4 cut(s)	171, 392, 1136, 1713
TaqI	TCGA	3 cut(s)	285, 815, 1704
TasI	AATT	6 cut(s)	593, 766, 922, 1404, 1591, 1779
TfiI	GAWTC	2 cut(s)	580, 1727
Tru1I	TTAA	6 cut(s)	182, 777, 1223, 1335, 1488, 1542
Tru9I	TTAA	6 cut(s)	182, 777, 1223, 1335, 1488, 1542
TscAI	CASTG	5 cut(s)	202, 694, 1444, 1479, 1584
TseFI	GTSAC	2 cut(s)	385, 1162
Tsp45I	GTSAC	2 cut(s)	385, 1162
TspDTI	ATGAA	1 cut(s)	1641
TspGWI	ACGGA	2 cut(s)	125, 373
TspRI	CASTG	5 cut(s)	202, 694, 1444, 1479, 1584
Tth111I	GACNNNGTC	1 cut(s)	1709
Vha464I	CTTAAG	1 cut(s)	776
XapI	RAATTY	1 cut(s)	1779
XbaI	TCTAGA	1 cut(s)	1681
XceI	RCATGY	2 cut(s)	1180, 1570
XmnI	GAANNNNTTC	1 cut(s)	612
XspI	CTAG	5 cut(s)	425, 630, 678, 1145, 1682

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.