Rh7AG179100

Ran-binding domain

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7A
Physical Location & Seq
Forward (+)
15850994 .. 15856904
5911 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7AG179100.1

Sequence Viewer

Length: 1302 bp
ATGATGGGAGGAGCCAAACGTTTCGGCTTATCAGATACCAACTCCGACTCCGCCGCCTTTCGGAACAAAAGAATAATGACAGGATCCTCATTTGATGTTCATAGAGCAGAATCTTCTCAAGAGCAGATTACAGCTACACCTTCATTGGATGAACGGCGAGCCGAGTCATCGCGGCTGCATGTGAGAGCTCTCAACACCCAATTTGCAAGTTGGGTACAGACACAACTAAAAAATCATCCTGATGAAATTTGGGAAGACGGTATTCGAGATTACCTGGCCCATGCTTCAAACATCATGGAAAAATTCAGTGACGTTGTGAACTGGCTTAAAGTAAATGCTGCAAAAGGAGAAACTTTGGCTGCTGCAGGATCTCAGACTTCTACTGAGAAGAAAAAGGTGTCGGAGTCCACAAAGAATGAGACGAACAAATTTCAGGCGACAACCCCTTTCTCATCAGTTGGTGCAACCACAAACTTTACAGCTCCATGGAGTGCTGGAGTGTTCTCGAACAGCCAGAGCTCTACAGGAGTATTCTCCAACAACCATAGCTCCACAGGAGTGTTCTCTACCAGCAAAAGTTCTACAGGAGTATCTTCCAATGGCCAAAGCTATTCAGGATTATATAACAGCCAAAGCTCTCCAGTCTTCTCCGCTAATCAGAGCTCCAGCATGTTTTCCAGTAGTCAGAGCTCCGGCATGTTCTCCAATAGCCAAAGCTCCAGCATGTTTTCCAATAGCCAAAGCCCCGGGCAATTCTCAAATAGTCAAAGCCCGGGATTATTTTCCAACAATCAAAGTTTTGGGGGATTCTCCAACACTCCCAGTTTTGGGTTATTCTCCAACAGTCAAAGTTCTGGCGCATTGTCCAACAGTCAACCCCCTCCCTTGTTTGGAAGTCAGAGTTCAGTTCCTCAAAACCGTGATGCTTCAGATGAAGCAGATGCTGATAATGATGTGGAGGAACCTAGCAGCCCATCTGTGAAAAAGTCTGAAGAAAAGGGTGTTGTTGTAGTCCACGAAGTCAAGTGCAAACTTTATGTGAAGGTATGGGCATACAATAGTATATATTTGTTCACCGTCAACCACGTATGGGTAATCAGAATTCTTTATGTGCTGAAACAAATTTATTGTGATTTTGTGTTTTCATTTATCTATTTGCTAGATGCACACTTTAATTTGATTGAAGGACTAAAACTAATGTATGGTGGTTACAGTCTATCGATACTTATTTGGAATTTTCCAAGTTTAACAAGCAGGTATTTGAAGAAGAGGTTGCCATGTAAGAAATATGAATCTGTATAG

Protein Analysis

433

Amino Acids

47.39

Weight (kDa)

8.55

Isoelectric Point (pI)

52.63

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1245
AccII CGCG 1 cut(s) 172
AciI CCGC 4 cut(s) 51, 54, 172, 651
AclI AACGTT 1 cut(s) 19
AclWI GGATC 3 cut(s) 78, 91, 376
AcoI YGGCCR 1 cut(s) 601
AcsI RAATTY 6 cut(s) 246, 302, 428, 1101, 1122, 1234
AcuI CTGAAG 2 cut(s) 912, 1011
AfaI GTAC 1 cut(s) 216
AfiI CCNNNNNNNGG 5 cut(s) 60, 827, 828, 890, 1090
AgsI TTSAA 3 cut(s) 288, 1184, 1264
AjnI CCWGG 1 cut(s) 273
AleI CACNNNNGTG 1 cut(s) 557
Alw21I GWGCWC 4 cut(s) 190, 521, 665, 692
Alw26I GTCTC 1 cut(s) 413
AlwI GGATC 3 cut(s) 78, 91, 376
AlwNI CAGNNNCTG 1 cut(s) 944
Ama87I CYCGRG 2 cut(s) 746, 772
AoxI GGCC 2 cut(s) 276, 601
ApeKI GCWGC 5 cut(s) 175, 338, 359, 362, 969
ApoI RAATTY 6 cut(s) 246, 302, 428, 1101, 1122, 1234
AspLEI GCGC 1 cut(s) 860
AspS9I GGNCC 1 cut(s) 277
AsuC2I CCSGG 4 cut(s) 747, 748, 773, 774
AsuHPI GGTGA 1 cut(s) 1066
AvaI CYCGRG 2 cut(s) 746, 772
BaeI ACNNNNGTAYC 2 cut(s) 573, 606
BalI TGGCCA 1 cut(s) 603
BamHI GGATCC 1 cut(s) 83
BanII GRGCYC 4 cut(s) 190, 521, 665, 692
BbsI GAAGAC 2 cut(s) 261, 637
Bbv12I GWGCWC 4 cut(s) 190, 521, 665, 692
BbvI GCAGC 5 cut(s) 162, 325, 346, 349, 981
BccI CCATC 1 cut(s) 982
BceAI ACGGC 1 cut(s) 170
BciT130I CCWGG 1 cut(s) 275
BcnI CCSGG 4 cut(s) 747, 748, 773, 774
BcoDI GTCTC 1 cut(s) 413
BfaI CTAG 2 cut(s) 966, 1160
BfmI CTRYAG 3 cut(s) 363, 522, 582
BfuAI ACCTGC 1 cut(s) 1245
BisI GCNGC 7 cut(s) 54, 173, 176, 339, 360, 363, 970
BlsI GCNGC 7 cut(s) 55, 174, 177, 340, 361, 364, 971
Bme1390I CCNGG 5 cut(s) 275, 747, 748, 773, 774
BmeT110I CYCGRG 2 cut(s) 746, 772
BmgT120I GGNCC 1 cut(s) 277
BmiI GGNNCC 3 cut(s) 13, 85, 963
BmrFI CCNGG 5 cut(s) 275, 747, 748, 773, 774
BmrI ACTGGG 1 cut(s) 816
BmsI GCATC 3 cut(s) 913, 931, 1153
BmuI ACTGGG 1 cut(s) 816
BpiI GAAGAC 2 cut(s) 261, 637
BpmI CTGGAG 4 cut(s) 516, 624, 649, 703
BpuEI CTTGAG 1 cut(s) 102
BpuMI CCSGG 4 cut(s) 747, 748, 773, 774
Bsa29I ATCGAT 1 cut(s) 1220
BsaAI YACGTR 1 cut(s) 1087
BsaJI CCNNGG 4 cut(s) 485, 745, 746, 772
BsaXI ACNNNNNCTCC 4 cut(s) 32, 62, 533, 563
Bsc4I CCNNNNNNNGG 5 cut(s) 60, 827, 828, 890, 1090
Bse1I ACTGG 4 cut(s) 326, 641, 678, 822
BseBI CCWGG 1 cut(s) 275
BseCI ATCGAT 1 cut(s) 1220
BseDI CCNNGG 4 cut(s) 485, 745, 746, 772
BseGI GGATG 2 cut(s) 154, 235
BseLI CCNNNNNNNGG 5 cut(s) 60, 827, 828, 890, 1090
BseMII CTCAG 2 cut(s) 375, 386
BseNI ACTGG 4 cut(s) 326, 641, 678, 822
BseRI GAGGAG 1 cut(s) 24
BseXI GCAGC 5 cut(s) 162, 325, 346, 349, 981
Bsh1236I CGCG 1 cut(s) 172
BshFI GGCC 2 cut(s) 278, 603
BshVI ATCGAT 1 cut(s) 1220
BsiHKAI GWGCWC 4 cut(s) 190, 521, 665, 692
BsiHKCI CYCGRG 2 cut(s) 746, 772
BsiSI CCGG 3 cut(s) 693, 747, 773
BslI CCNNNNNNNGG 5 cut(s) 60, 827, 828, 890, 1090
BsmAI GTCTC 1 cut(s) 413
BsmBI CGTCTC 1 cut(s) 413
BsnI GGCC 2 cut(s) 278, 603
BsoBI CYCGRG 2 cut(s) 746, 772
Bsp1286I GDGCHC 4 cut(s) 190, 521, 665, 692
Bsp143I GATC 2 cut(s) 83, 368
Bsp19I CCATGG 1 cut(s) 485
BspACI CCGC 4 cut(s) 51, 54, 172, 651
BspANI GGCC 2 cut(s) 278, 603
BspCNI CTCAG 2 cut(s) 376, 385
BspDI ATCGAT 1 cut(s) 1220
BspFNI CGCG 1 cut(s) 172
BspLI GGNNCC 3 cut(s) 13, 85, 963
BspMAI CTGCAG 1 cut(s) 367
BspMI ACCTGC 1 cut(s) 1245
BspPI GGATC 3 cut(s) 78, 91, 376
BsrI ACTGG 4 cut(s) 326, 641, 678, 822
BssECI CCNNGG 4 cut(s) 485, 745, 746, 772
BssMI GATC 2 cut(s) 83, 368
BssT1I CCWWGG 1 cut(s) 485
Bst2UI CCWGG 1 cut(s) 275
Bst4CI ACNGT 6 cut(s) 260, 845, 872, 920, 1078, 1214
Bst6I CTCTTC 1 cut(s) 1262
BstBAI YACGTR 1 cut(s) 1087
BstC8I GCNNGC 1 cut(s) 159
BstDEI CTNAG 2 cut(s) 372, 384
BstDSI CCRYGG 1 cut(s) 485
BstF5I GGATG 2 cut(s) 154, 235
BstFNI CGCG 1 cut(s) 172
BstHHI GCGC 1 cut(s) 860
BstKTI GATC 2 cut(s) 86, 371
BstMAI GTCTC 1 cut(s) 413
BstMBI GATC 2 cut(s) 83, 368
BstNI CCWGG 1 cut(s) 275
BstNSI RCATGY 4 cut(s) 182, 673, 700, 727
BstSCI CCNGG 5 cut(s) 273, 745, 746, 771, 772
BstSFI CTRYAG 3 cut(s) 363, 522, 582
BstUI CGCG 1 cut(s) 172
BstV1I GCAGC 5 cut(s) 162, 325, 346, 349, 981
BstV2I GAAGAC 2 cut(s) 261, 637
BstX2I RGATCY 2 cut(s) 83, 368
BstYI RGATCY 2 cut(s) 83, 368
Bsu15I ATCGAT 1 cut(s) 1220
BsuRI GGCC 2 cut(s) 278, 603
BsuTUI ATCGAT 1 cut(s) 1220
BtgI CCRYGG 1 cut(s) 485
BtgZI GCGATG 1 cut(s) 153
BtsCI GGATG 2 cut(s) 154, 235
BtsIMutI CAGTG 1 cut(s) 313
BveI ACCTGC 1 cut(s) 1245
Cac8I GCNNGC 1 cut(s) 159
CaiI CAGNNNCTG 1 cut(s) 944
CfoI GCGC 1 cut(s) 860
Cfr13I GGNCC 1 cut(s) 277
Cfr9I CCCGGG 2 cut(s) 746, 772
ClaI ATCGAT 1 cut(s) 1220
Csp6I GTAC 1 cut(s) 215
CviAII CATG 8 cut(s) 179, 281, 295, 486, 670, 697, 724, 1278
CviQI GTAC 1 cut(s) 215
DdeI CTNAG 2 cut(s) 372, 384
DpnI GATC 2 cut(s) 85, 370
DpnII GATC 2 cut(s) 83, 368
EaeI YGGCCR 1 cut(s) 601
Eam1104I CTCTTC 1 cut(s) 1262
EarI CTCTTC 1 cut(s) 1262
EciI GGCGGA 1 cut(s) 40
Ecl136II GAGCTC 4 cut(s) 188, 519, 663, 690
Eco130I CCWWGG 1 cut(s) 485
Eco24I GRGCYC 4 cut(s) 190, 521, 665, 692
Eco53kI GAGCTC 4 cut(s) 188, 519, 663, 690
Eco57I CTGAAG 2 cut(s) 912, 1011
Eco88I CYCGRG 2 cut(s) 746, 772
EcoICRI GAGCTC 4 cut(s) 188, 519, 663, 690
EcoRI GAATTC 1 cut(s) 1101
EcoRII CCWGG 1 cut(s) 273
EcoT14I CCWWGG 1 cut(s) 485
EcoT38I GRGCYC 4 cut(s) 190, 521, 665, 692
ErhI CCWWGG 1 cut(s) 485
Esp3I CGTCTC 1 cut(s) 413
FaeI CATG 8 cut(s) 182, 284, 298, 489, 673, 700, 727, 1281
FatI CATG 8 cut(s) 178, 280, 294, 485, 669, 696, 723, 1277
Fnu4HI GCNGC 7 cut(s) 54, 173, 176, 339, 360, 363, 970
FokI GGATG 2 cut(s) 161, 222
FriOI GRGCYC 4 cut(s) 190, 521, 665, 692
Fsp4HI GCNGC 7 cut(s) 54, 173, 176, 339, 360, 363, 970
FspBI CTAG 2 cut(s) 966, 1160
GlaI GCGC 1 cut(s) 859
GluI GCNGC 7 cut(s) 54, 173, 176, 339, 360, 363, 970
GsuI CTGGAG 4 cut(s) 516, 624, 649, 703
HaeIII GGCC 2 cut(s) 278, 603
HapII CCGG 3 cut(s) 693, 747, 773
HhaI GCGC 1 cut(s) 860
Hin1II CATG 8 cut(s) 182, 284, 298, 489, 673, 700, 727, 1281
Hin6I GCGC 1 cut(s) 858
HinP1I GCGC 1 cut(s) 858
HincII GTYRAC 2 cut(s) 875, 1081
HindII GTYRAC 2 cut(s) 875, 1081
HinfI GANTC 6 cut(s) 47, 110, 164, 404, 807, 1292
HpaII CCGG 3 cut(s) 693, 747, 773
HphI GGTGA 1 cut(s) 1066
Hpy166II GTNNAC 6 cut(s) 319, 408, 875, 1015, 1074, 1081
Hpy188III TCNNGA 5 cut(s) 119, 239, 266, 505, 615
Hpy8I GTNNAC 6 cut(s) 319, 408, 875, 1015, 1074, 1081
HpyAV CCTTC 3 cut(s) 150, 1036, 1178
HpyCH4III ACNGT 6 cut(s) 260, 845, 872, 920, 1078, 1214
HpyCH4IV ACGT 3 cut(s) 19, 312, 1086
HpyCH4V TGCA 7 cut(s) 178, 206, 341, 365, 464, 1029, 1166
HpyF3I CTNAG 2 cut(s) 372, 384
HpySE526I ACGT 3 cut(s) 19, 312, 1086
Hsp92II CATG 8 cut(s) 182, 284, 298, 489, 673, 700, 727, 1281
HspAI GCGC 1 cut(s) 858
Kzo9I GATC 2 cut(s) 83, 368
LmnI GCTCC 6 cut(s) 11, 487, 554, 668, 695, 722
Lsp1109I GCAGC 5 cut(s) 162, 325, 346, 349, 981
LweI GCATC 3 cut(s) 913, 931, 1153
MaeI CTAG 2 cut(s) 966, 1160
MaeII ACGT 3 cut(s) 19, 312, 1086
MaeIII GTNAC 2 cut(s) 308, 1208
MalI GATC 2 cut(s) 85, 370
MboI GATC 2 cut(s) 83, 368
MboII GAAGA 8 cut(s) 105, 266, 400, 585, 637, 1004, 1276, 1279
MflI RGATCY 2 cut(s) 83, 368
MhlI GDGCHC 4 cut(s) 190, 521, 665, 692
MlsI TGGCCA 1 cut(s) 603
MluCI AATT 9 cut(s) 200, 246, 302, 428, 752, 1101, 1122, 1174, 1234
MluNI TGGCCA 1 cut(s) 603
MlyI GAGTC 3 cut(s) 41, 173, 413
MmeI TCCRAC 7 cut(s) 69, 381, 561, 810, 837, 864, 891
MnlI CCTC 5 cut(s) 97, 891, 921, 952, 1263
Mox20I TGGCCA 1 cut(s) 603
MscI TGGCCA 1 cut(s) 603
MseI TTAA 3 cut(s) 327, 1173, 1247
MslI CAYNNNNRTG 2 cut(s) 240, 557
Msp20I TGGCCA 1 cut(s) 603
MspI CCGG 3 cut(s) 693, 747, 773
MspR9I CCNGG 5 cut(s) 275, 747, 748, 773, 774
MvaI CCWGG 1 cut(s) 275
MvnI CGCG 1 cut(s) 172
NciI CCSGG 4 cut(s) 747, 748, 773, 774
NcoI CCATGG 1 cut(s) 485
NdeII GATC 2 cut(s) 83, 368
NlaIII CATG 8 cut(s) 182, 284, 298, 489, 673, 700, 727, 1281
NlaIV GGNNCC 3 cut(s) 13, 85, 963
NmeAIII GCCGAG 1 cut(s) 187
NmuCI GTSAC 1 cut(s) 308
NspI RCATGY 4 cut(s) 182, 673, 700, 727
OliI CACNNNNGTG 1 cut(s) 557
PfeI GAWTC 3 cut(s) 110, 807, 1292
PkrI GCNGC 7 cut(s) 55, 174, 177, 340, 361, 364, 971
PleI GAGTC 3 cut(s) 41, 172, 412
PpsI GAGTC 3 cut(s) 41, 172, 412
Ppu21I YACGTR 1 cut(s) 1087
Psp124BI GAGCTC 4 cut(s) 190, 521, 665, 692
Psp1406I AACGTT 1 cut(s) 19
Psp6I CCWGG 1 cut(s) 273
PspGI CCWGG 1 cut(s) 273
PspN4I GGNNCC 3 cut(s) 13, 85, 963
PspPI GGNCC 1 cut(s) 277
PstI CTGCAG 1 cut(s) 367
PstNI CAGNNNCTG 1 cut(s) 944
PsuI RGATCY 2 cut(s) 83, 368
RsaI GTAC 1 cut(s) 216
RsaNI GTAC 1 cut(s) 215
RseI CAYNNNNRTG 2 cut(s) 240, 557
SacI GAGCTC 4 cut(s) 190, 521, 665, 692
SaqAI TTAA 3 cut(s) 327, 1173, 1247
SatI GCNGC 7 cut(s) 54, 173, 176, 339, 360, 363, 970
Sau3AI GATC 2 cut(s) 83, 368
Sau96I GGNCC 1 cut(s) 277
SchI GAGTC 3 cut(s) 41, 173, 413
ScrFI CCNGG 5 cut(s) 275, 747, 748, 773, 774
SduI GDGCHC 4 cut(s) 190, 521, 665, 692
SfaNI GCATC 3 cut(s) 913, 931, 1153
SfcI CTRYAG 3 cut(s) 363, 522, 582
SmaI CCCGGG 2 cut(s) 748, 774
SmiMI CAYNNNNRTG 2 cut(s) 240, 557
SmlI CTYRAG 1 cut(s) 117
SmoI CTYRAG 1 cut(s) 117
Sse9I AATT 9 cut(s) 200, 246, 302, 428, 752, 1101, 1122, 1174, 1234
SsiI CCGC 4 cut(s) 51, 54, 172, 651
SspMI CTAG 2 cut(s) 966, 1160
SstI GAGCTC 4 cut(s) 190, 521, 665, 692
StyD4I CCNGG 5 cut(s) 273, 745, 746, 771, 772
StyI CCWWGG 1 cut(s) 485
TaaI ACNGT 6 cut(s) 260, 845, 872, 920, 1078, 1214
TaiI ACGT 3 cut(s) 22, 315, 1089
TaqI TCGA 3 cut(s) 265, 506, 1220
TasI AATT 9 cut(s) 200, 246, 302, 428, 752, 1101, 1122, 1174, 1234
TauI GCSGC 2 cut(s) 56, 175
TfiI GAWTC 3 cut(s) 110, 807, 1292
Tru1I TTAA 3 cut(s) 327, 1173, 1247
Tru9I TTAA 3 cut(s) 327, 1173, 1247
TscAI CASTG 1 cut(s) 313
TseFI GTSAC 1 cut(s) 308
TseI GCWGC 5 cut(s) 175, 338, 359, 362, 969
Tsp45I GTSAC 1 cut(s) 308
TspDTI ATGAA 6 cut(s) 89, 132, 165, 258, 948, 1134
TspMI CCCGGG 2 cut(s) 746, 772
TspRI CASTG 1 cut(s) 313
XapI RAATTY 6 cut(s) 246, 302, 428, 1101, 1122, 1234
XceI RCATGY 4 cut(s) 182, 673, 700, 727
XmaI CCCGGG 2 cut(s) 746, 772
XspI CTAG 2 cut(s) 966, 1160
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.