Rh7BG182500

Ran-binding domain

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7B
Physical Location & Seq
Forward (+)
14535688 .. 14541595
5908 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7BG182500.1

Sequence Viewer

Length: 1482 bp
ATGCTTATTGTAATTTCTCTTACATTAATGATGCAGTTTCGGAACAAAAGAATAATGACAGGATCCTCATTTGATGTTCATAGAGCAGAATCTTCTCAAGAGCAGATTACGGCTACACCTTCATTAGATGAACGGCGAGCCGAGTCATCGCGGCTGCATGTGAGAGCTCTCAACACCCAATTTGCAAGTTGGGTACAGACACAACTAAAAAATCATCCTGATGAAATTTGGGAAGACGGTATTCGAGATTACCTGGCCCATGCTTCAAACATCATGGAAAAATTCAGTGACGTTGTGAACTGGCTTAAAGTAAATGCTGCAAAAGGAGAAACTTTGGCTGCTGCAGGATCTCAGACTTCTACTGAGAAGAAAAAGGTGTCGGAGTCCTCAAAGAATGAGACGAACAAATTTCAGGCAACAACCCCTTTCTCATCAGTTGGTGCAACCACAAACTTTACAGCTCCATGGAGTGCTGGAGTGTTCTCGAACAGCCAGAGCTCTACAGGAGTATTCTCCAACAACCATAGCTCCACAGGAGTGTTCTCTACCAGCAAAAATTCTACAGGAGTATCTTCCAATGGCCAAAGCTATTCAGGATTATATAACAGCCAAAGCTCTCCAGTCTTCTCCGCTAATCAGAGCTCCAGCATATTTTCCAGTAGTCAGAGCTCCGGCATATTTTCCAATAGCCAAAGCTCCAGCATGTTTTCCAATAGCCAAAGCTCCGGCATGTTTTCCAATAGCCAAAGCCCCGGGCAATTCTCAAATAGTCAAAGCTCTAAAGTTTCTTCCGATAGTCAAAGCCCTGGGTTATTTTCTAGTAGTCAAAGTTCGGCATTATTTTCCAATAGTCAAAGCCCGGGATTATTTTCCAACAATCAAAGTTTTGGGGGATTCTCCAACACTCCCAGTTTTGGGTTATTCTCCAACAATCAAAGTTCTGGGGCATTGTCCAAAAGTCAACCCCCTCCCTTGTTTGGAAGTCAGAGTTCAGTTCCTCAAAACCGTGATGCTTCTGATGAAGCAGATGCTGATAATGATGTGGAGGAACCTAGCAGCCCATCTGTGAAAAAGTCTGAAGAAAAGGGTGTTGTTGTAGTCCATGAAGTCAAGTGCAAACTTTATGTGAAGTCAAGTGATCCAGCGGATAGTTGGAAAGATAAAGGGACAGGGCAGCTAACGATAAGATGCAAAGAGGGTGTCAGCAAGGGTACAAAAGAATCAAAACCAACAGTCATTGTTCGGAATGATGTGGGAAAGCTGCTGCTTAACGCGTTGTTATATTCAGGCATCAAGACTAATCCGCAGAAGAATTCCCTTGTTGCAATATTTCATACTGCGGGCGATGGTGATGGAAATGAAGGTAGTAATCAAGATAGTGTCGTGGCACAAACCTTCTTAATAAGGATGAAGACAGAGGAGGATAGAAATAAACTGGCCACAGCAATCCAAGAATATGCTCCTGCATCTGAAAGCGAGTAA

Protein Analysis

493

Amino Acids

52.77

Weight (kDa)

6.42

Isoelectric Point (pI)

55.83

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ran_BP1 PF00638 356 - 485 3.4e-07 RanBP1 domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 2 cut(s) 151, 1274
AciI CCGC 5 cut(s) 151, 630, 1145, 1304, 1340
AclWI GGATC 4 cut(s) 57, 70, 355, 1133
AcoI YGGCCR 2 cut(s) 580, 1437
AcsI RAATTY 5 cut(s) 225, 281, 407, 556, 1312
AcuI CTGAAG 1 cut(s) 1098
AfaI GTAC 2 cut(s) 195, 1213
AfiI CCNNNNNNNGG 3 cut(s) 914, 915, 977
AflIII ACRYGT 1 cut(s) 1272
AgsI TTSAA 1 cut(s) 267
AjnI CCWGG 2 cut(s) 252, 805
AleI CACNNNNGTG 1 cut(s) 536
Alw21I GWGCWC 4 cut(s) 169, 500, 644, 671
Alw26I GTCTC 1 cut(s) 392
AlwI GGATC 4 cut(s) 57, 70, 355, 1133
AlwNI CAGNNNCTG 1 cut(s) 1031
Ama87I CYCGRG 2 cut(s) 752, 859
AoxI GGCC 3 cut(s) 255, 580, 1437
ApeKI GCWGC 8 cut(s) 154, 317, 338, 341, 1056, 1174, 1261, 1264
ApoI RAATTY 5 cut(s) 225, 281, 407, 556, 1312
ArsI GACNNNNNNTTYG 2 cut(s) 1185, 1217
AseI ATTAAT 1 cut(s) 26
AspS9I GGNCC 1 cut(s) 256
AsuC2I CCSGG 4 cut(s) 753, 754, 860, 861
AsuHPI GGTGA 1 cut(s) 1361
AvaI CYCGRG 2 cut(s) 752, 859
BaeI ACNNNNGTAYC 2 cut(s) 552, 585
BalI TGGCCA 2 cut(s) 582, 1439
BamHI GGATCC 1 cut(s) 62
BanII GRGCYC 4 cut(s) 169, 500, 644, 671
BbsI GAAGAC 3 cut(s) 240, 616, 1418
Bbv12I GWGCWC 4 cut(s) 169, 500, 644, 671
BbvI GCAGC 8 cut(s) 141, 304, 325, 328, 1068, 1186, 1248, 1251
BccI CCATC 3 cut(s) 1069, 1340, 1346
BceAI ACGGC 2 cut(s) 126, 149
BciT130I CCWGG 2 cut(s) 254, 807
BcnI CCSGG 4 cut(s) 753, 754, 860, 861
BcoDI GTCTC 1 cut(s) 392
BfaI CTAG 2 cut(s) 819, 1053
BfmI CTRYAG 3 cut(s) 342, 501, 561
BisI GCNGC 9 cut(s) 152, 155, 318, 339, 342, 1057, 1175, 1262, 1265
BlsI GCNGC 9 cut(s) 153, 156, 319, 340, 343, 1058, 1176, 1263, 1266
Bme1390I CCNGG 6 cut(s) 254, 753, 754, 807, 860, 861
BmeT110I CYCGRG 2 cut(s) 752, 859
BmgT120I GGNCC 1 cut(s) 256
BmiI GGNNCC 2 cut(s) 64, 1050
BmrFI CCNGG 6 cut(s) 254, 753, 754, 807, 860, 861
BmrI ACTGGG 1 cut(s) 903
BmsI GCATC 6 cut(s) 21, 1000, 1018, 1178, 1299, 1475
BmuI ACTGGG 1 cut(s) 903
BpiI GAAGAC 3 cut(s) 240, 616, 1418
BpmI CTGGAG 4 cut(s) 495, 603, 628, 682
BpuEI CTTGAG 1 cut(s) 81
BpuMI CCSGG 4 cut(s) 753, 754, 860, 861
BsaJI CCNNGG 6 cut(s) 464, 751, 752, 805, 806, 859
BsaXI ACNNNNNCTCC 2 cut(s) 512, 542
Bsc4I CCNNNNNNNGG 3 cut(s) 914, 915, 977
Bse1I ACTGG 5 cut(s) 305, 620, 657, 909, 1440
BseBI CCWGG 2 cut(s) 254, 807
BseDI CCNNGG 6 cut(s) 464, 751, 752, 805, 806, 859
BseGI GGATG 2 cut(s) 214, 1413
BseLI CCNNNNNNNGG 3 cut(s) 914, 915, 977
BseMII CTCAG 2 cut(s) 354, 365
BseNI ACTGG 5 cut(s) 305, 620, 657, 909, 1440
BseRI GAGGAG 1 cut(s) 1433
BseXI GCAGC 8 cut(s) 141, 304, 325, 328, 1068, 1186, 1248, 1251
Bsh1236I CGCG 2 cut(s) 151, 1274
BshFI GGCC 3 cut(s) 257, 582, 1439
BsiHKAI GWGCWC 4 cut(s) 169, 500, 644, 671
BsiHKCI CYCGRG 2 cut(s) 752, 859
BsiSI CCGG 4 cut(s) 672, 726, 753, 860
BslFI GGGAC 1 cut(s) 1180
BslI CCNNNNNNNGG 3 cut(s) 914, 915, 977
BsmAI GTCTC 1 cut(s) 392
BsmBI CGTCTC 1 cut(s) 392
BsmFI GGGAC 1 cut(s) 1180
BsnI GGCC 3 cut(s) 257, 582, 1439
BsoBI CYCGRG 2 cut(s) 752, 859
Bsp1286I GDGCHC 4 cut(s) 169, 500, 644, 671
Bsp143I GATC 3 cut(s) 62, 347, 1138
Bsp19I CCATGG 1 cut(s) 464
BspACI CCGC 5 cut(s) 151, 630, 1145, 1304, 1340
BspANI GGCC 3 cut(s) 257, 582, 1439
BspCNI CTCAG 2 cut(s) 355, 364
BspFNI CGCG 2 cut(s) 151, 1274
BspLI GGNNCC 2 cut(s) 64, 1050
BspMAI CTGCAG 1 cut(s) 346
BspPI GGATC 4 cut(s) 57, 70, 355, 1133
BsrI ACTGG 5 cut(s) 305, 620, 657, 909, 1440
BssECI CCNNGG 6 cut(s) 464, 751, 752, 805, 806, 859
BssMI GATC 3 cut(s) 62, 347, 1138
BssT1I CCWWGG 1 cut(s) 464
Bst2UI CCWGG 2 cut(s) 254, 807
Bst4CI ACNGT 3 cut(s) 239, 1007, 1234
BstC8I GCNNGC 2 cut(s) 138, 1342
BstDEI CTNAG 2 cut(s) 351, 363
BstDSI CCRYGG 1 cut(s) 464
BstF5I GGATG 2 cut(s) 214, 1413
BstFNI CGCG 2 cut(s) 151, 1274
BstKTI GATC 3 cut(s) 65, 350, 1141
BstMAI GTCTC 1 cut(s) 392
BstMBI GATC 3 cut(s) 62, 347, 1138
BstNI CCWGG 2 cut(s) 254, 807
BstNSI RCATGY 3 cut(s) 161, 706, 733
BstSCI CCNGG 6 cut(s) 252, 751, 752, 805, 858, 859
BstSFI CTRYAG 3 cut(s) 342, 501, 561
BstUI CGCG 2 cut(s) 151, 1274
BstV1I GCAGC 8 cut(s) 141, 304, 325, 328, 1068, 1186, 1248, 1251
BstV2I GAAGAC 3 cut(s) 240, 616, 1418
BstX2I RGATCY 2 cut(s) 62, 347
BstYI RGATCY 2 cut(s) 62, 347
BsuRI GGCC 3 cut(s) 257, 582, 1439
BtgI CCRYGG 1 cut(s) 464
BtgZI GCGATG 2 cut(s) 132, 1359
BtsCI GGATG 2 cut(s) 214, 1413
BtsIMutI CAGTG 1 cut(s) 292
Cac8I GCNNGC 2 cut(s) 138, 1342
CaiI CAGNNNCTG 1 cut(s) 1031
Cfr13I GGNCC 1 cut(s) 256
Cfr9I CCCGGG 2 cut(s) 752, 859
Csp6I GTAC 2 cut(s) 194, 1212
CviAII CATG 7 cut(s) 158, 260, 274, 465, 703, 730, 1103
CviQI GTAC 2 cut(s) 194, 1212
DdeI CTNAG 2 cut(s) 351, 363
DpnI GATC 3 cut(s) 64, 349, 1140
DpnII GATC 3 cut(s) 62, 347, 1138
EaeI YGGCCR 2 cut(s) 580, 1437
Ecl136II GAGCTC 4 cut(s) 167, 498, 642, 669
Eco130I CCWWGG 1 cut(s) 464
Eco24I GRGCYC 4 cut(s) 169, 500, 644, 671
Eco53kI GAGCTC 4 cut(s) 167, 498, 642, 669
Eco57I CTGAAG 1 cut(s) 1098
Eco88I CYCGRG 2 cut(s) 752, 859
EcoICRI GAGCTC 4 cut(s) 167, 498, 642, 669
EcoRI GAATTC 1 cut(s) 1312
EcoRII CCWGG 2 cut(s) 252, 805
EcoT14I CCWWGG 1 cut(s) 464
EcoT38I GRGCYC 4 cut(s) 169, 500, 644, 671
ErhI CCWWGG 1 cut(s) 464
Esp3I CGTCTC 1 cut(s) 392
FaeI CATG 7 cut(s) 161, 263, 277, 468, 706, 733, 1106
FaqI GGGAC 1 cut(s) 1180
FatI CATG 7 cut(s) 157, 259, 273, 464, 702, 729, 1102
FauI CCCGC 1 cut(s) 1333
Fnu4HI GCNGC 9 cut(s) 152, 155, 318, 339, 342, 1057, 1175, 1262, 1265
FokI GGATG 2 cut(s) 201, 1420
FriOI GRGCYC 4 cut(s) 169, 500, 644, 671
Fsp4HI GCNGC 9 cut(s) 152, 155, 318, 339, 342, 1057, 1175, 1262, 1265
FspBI CTAG 2 cut(s) 819, 1053
GluI GCNGC 9 cut(s) 152, 155, 318, 339, 342, 1057, 1175, 1262, 1265
GsuI CTGGAG 4 cut(s) 495, 603, 628, 682
HaeIII GGCC 3 cut(s) 257, 582, 1439
HapII CCGG 4 cut(s) 672, 726, 753, 860
Hin1II CATG 7 cut(s) 161, 263, 277, 468, 706, 733, 1106
HincII GTYRAC 1 cut(s) 962
HindII GTYRAC 1 cut(s) 962
HinfI GANTC 5 cut(s) 89, 143, 383, 894, 1220
HpaII CCGG 4 cut(s) 672, 726, 753, 860
HphI GGTGA 1 cut(s) 1361
Hpy166II GTNNAC 2 cut(s) 298, 962
Hpy188III TCNNGA 7 cut(s) 98, 218, 245, 484, 594, 1294, 1373
Hpy8I GTNNAC 2 cut(s) 298, 962
HpyAV CCTTC 3 cut(s) 129, 1355, 1405
HpyCH4III ACNGT 3 cut(s) 239, 1007, 1234
HpyCH4IV ACGT 1 cut(s) 291
HpyF3I CTNAG 2 cut(s) 351, 363
HpySE526I ACGT 1 cut(s) 291
Hsp92II CATG 7 cut(s) 161, 263, 277, 468, 706, 733, 1106
Kzo9I GATC 3 cut(s) 62, 347, 1138
LmnI GCTCC 7 cut(s) 466, 533, 647, 674, 701, 728, 1465
Lsp1109I GCAGC 8 cut(s) 141, 304, 325, 328, 1068, 1186, 1248, 1251
LweI GCATC 6 cut(s) 21, 1000, 1018, 1178, 1299, 1475
MaeI CTAG 2 cut(s) 819, 1053
MaeII ACGT 1 cut(s) 291
MaeIII GTNAC 1 cut(s) 287
MalI GATC 3 cut(s) 64, 349, 1140
MboI GATC 3 cut(s) 62, 347, 1138
MboII GAAGA 9 cut(s) 84, 245, 379, 564, 616, 780, 1091, 1321, 1423
MflI RGATCY 2 cut(s) 62, 347
MhlI GDGCHC 4 cut(s) 169, 500, 644, 671
MlsI TGGCCA 2 cut(s) 582, 1439
MluCI AATT 8 cut(s) 12, 179, 225, 281, 407, 556, 758, 1312
MluI ACGCGT 1 cut(s) 1272
MluNI TGGCCA 2 cut(s) 582, 1439
MlyI GAGTC 2 cut(s) 152, 392
MmeI TCCRAC 6 cut(s) 360, 540, 897, 924, 951, 1133
MnlI CCTC 8 cut(s) 76, 397, 978, 1008, 1039, 1189, 1411, 1414
Mox20I TGGCCA 2 cut(s) 582, 1439
MscI TGGCCA 2 cut(s) 582, 1439
MseI TTAA 4 cut(s) 26, 306, 1269, 1400
MslI CAYNNNNRTG 2 cut(s) 219, 536
Msp20I TGGCCA 2 cut(s) 582, 1439
MspA1I CMGCKG 1 cut(s) 1145
MspI CCGG 4 cut(s) 672, 726, 753, 860
MspR9I CCNGG 6 cut(s) 254, 753, 754, 807, 860, 861
MvaI CCWGG 2 cut(s) 254, 807
MvnI CGCG 2 cut(s) 151, 1274
NciI CCSGG 4 cut(s) 753, 754, 860, 861
NcoI CCATGG 1 cut(s) 464
NdeII GATC 3 cut(s) 62, 347, 1138
NlaIII CATG 7 cut(s) 161, 263, 277, 468, 706, 733, 1106
NlaIV GGNNCC 2 cut(s) 64, 1050
NmeAIII GCCGAG 1 cut(s) 166
NmuCI GTSAC 1 cut(s) 287
NspI RCATGY 3 cut(s) 161, 706, 733
OliI CACNNNNGTG 1 cut(s) 536
PasI CCCWGGG 1 cut(s) 806
PfeI GAWTC 3 cut(s) 89, 894, 1220
PkrI GCNGC 9 cut(s) 153, 156, 319, 340, 343, 1058, 1176, 1263, 1266
PleI GAGTC 2 cut(s) 151, 391
PpsI GAGTC 2 cut(s) 151, 391
PshBI ATTAAT 1 cut(s) 26
Psp124BI GAGCTC 4 cut(s) 169, 500, 644, 671
Psp6I CCWGG 2 cut(s) 252, 805
PspGI CCWGG 2 cut(s) 252, 805
PspN4I GGNNCC 2 cut(s) 64, 1050
PspPI GGNCC 1 cut(s) 256
PsrI GAACNNNNNNTAC 2 cut(s) 814, 846
PstI CTGCAG 1 cut(s) 346
PstNI CAGNNNCTG 1 cut(s) 1031
PsuI RGATCY 2 cut(s) 62, 347
RsaI GTAC 2 cut(s) 195, 1213
RsaNI GTAC 2 cut(s) 194, 1212
RseI CAYNNNNRTG 2 cut(s) 219, 536
SacI GAGCTC 4 cut(s) 169, 500, 644, 671
SaqAI TTAA 4 cut(s) 26, 306, 1269, 1400
SatI GCNGC 9 cut(s) 152, 155, 318, 339, 342, 1057, 1175, 1262, 1265
Sau3AI GATC 3 cut(s) 62, 347, 1138
Sau96I GGNCC 1 cut(s) 256
SchI GAGTC 2 cut(s) 152, 392
ScrFI CCNGG 6 cut(s) 254, 753, 754, 807, 860, 861
SduI GDGCHC 4 cut(s) 169, 500, 644, 671
SfaNI GCATC 6 cut(s) 21, 1000, 1018, 1178, 1299, 1475
SfcI CTRYAG 3 cut(s) 342, 501, 561
SmaI CCCGGG 2 cut(s) 754, 861
SmiMI CAYNNNNRTG 2 cut(s) 219, 536
SmlI CTYRAG 1 cut(s) 96
SmoI CTYRAG 1 cut(s) 96
Sse9I AATT 8 cut(s) 12, 179, 225, 281, 407, 556, 758, 1312
SsiI CCGC 5 cut(s) 151, 630, 1145, 1304, 1340
SspI AATATT 1 cut(s) 1329
SspMI CTAG 2 cut(s) 819, 1053
SstI GAGCTC 4 cut(s) 169, 500, 644, 671
StyD4I CCNGG 6 cut(s) 252, 751, 752, 805, 858, 859
StyI CCWWGG 1 cut(s) 464
TaaI ACNGT 3 cut(s) 239, 1007, 1234
TaiI ACGT 1 cut(s) 294
TaqI TCGA 2 cut(s) 244, 485
TasI AATT 8 cut(s) 12, 179, 225, 281, 407, 556, 758, 1312
TauI GCSGC 1 cut(s) 154
TfiI GAWTC 3 cut(s) 89, 894, 1220
Tru1I TTAA 4 cut(s) 26, 306, 1269, 1400
Tru9I TTAA 4 cut(s) 26, 306, 1269, 1400
TscAI CASTG 1 cut(s) 292
TseFI GTSAC 1 cut(s) 287
TseI GCWGC 8 cut(s) 154, 317, 338, 341, 1056, 1174, 1261, 1264
Tsp45I GTSAC 1 cut(s) 287
TspDTI ATGAA 9 cut(s) 68, 111, 144, 237, 1035, 1119, 1322, 1374, 1424
TspMI CCCGGG 2 cut(s) 752, 859
TspRI CASTG 1 cut(s) 292
VspI ATTAAT 1 cut(s) 26
XapI RAATTY 5 cut(s) 225, 281, 407, 556, 1312
XceI RCATGY 3 cut(s) 161, 706, 733
XcmI CCANNNNNNNNNTGG 1 cut(s) 1149
XmaI CCCGGG 2 cut(s) 752, 859
XspI CTAG 2 cut(s) 819, 1053
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.