Rh7AG408400

1,4-beta-D-glucanase-like

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7A
Physical Location & Seq
Forward (+)
54471986 .. 54483044
11059 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7AG408400.1

Sequence Viewer

Length: 276 bp
ATGGACTCTCACTCTTCCAGATCATCACATCACCTCCCTCATTTCAATCCAGGCCCATCTGCATCATCACTGGTGAAACTTGCAGGAAGAGTTGCCACTTCTGGATTCTGTGTTGTAGTCCCGGACTTCATCTACGGAGACCCATTTGTGTATGACAATTACAGGCCTCTAGCAGGCTGTTTAAAAGATATGGAACGAAGCCAGAGTGTTGATGATAAAGTTCAAAGAGGAGGACATATGACATATCATTATGCTCTGTCTCAACTTGTTGAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
Pfam Domains
Protein Families

Protein Analysis

91

Amino Acids

10.07

Weight (kDa)

6.57

Isoelectric Point (pI)

50.12

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AfiI CCNNNNNNNGG 1 cut(s) 173
AgsI TTSAA 2 cut(s) 46, 224
AjnI CCWGG 1 cut(s) 49
Alw26I GTCTC 2 cut(s) 132, 264
AoxI GGCC 2 cut(s) 52, 164
AspS9I GGNCC 1 cut(s) 53
AsuC2I CCSGG 1 cut(s) 122
AsuHPI GGTGA 2 cut(s) 23, 85
BccI CCATC 1 cut(s) 64
BciT130I CCWGG 1 cut(s) 51
BcnI CCSGG 1 cut(s) 122
BcoDI GTCTC 2 cut(s) 132, 264
BfaI CTAG 1 cut(s) 170
Bme1390I CCNGG 2 cut(s) 51, 122
BmgT120I GGNCC 1 cut(s) 53
BmrFI CCNGG 2 cut(s) 51, 122
BmsI GCATC 1 cut(s) 71
BpuMI CCSGG 1 cut(s) 122
BsaI GGTCTC 1 cut(s) 132
BsaXI ACNNNNNCTCC 2 cut(s) 18, 48
Bsc4I CCNNNNNNNGG 1 cut(s) 173
Bse1I ACTGG 1 cut(s) 75
BseBI CCWGG 1 cut(s) 51
BseLI CCNNNNNNNGG 1 cut(s) 173
BseNI ACTGG 1 cut(s) 75
BseRI GAGGAG 1 cut(s) 243
BshFI GGCC 2 cut(s) 54, 166
BsiSI CCGG 1 cut(s) 122
BslFI GGGAC 1 cut(s) 104
BslI CCNNNNNNNGG 1 cut(s) 173
BsmAI GTCTC 2 cut(s) 132, 264
BsmFI GGGAC 1 cut(s) 104
BsnI GGCC 2 cut(s) 54, 166
Bso31I GGTCTC 1 cut(s) 132
Bsp143I GATC 1 cut(s) 20
BspANI GGCC 2 cut(s) 54, 166
BspTNI GGTCTC 1 cut(s) 132
BsrI ACTGG 1 cut(s) 75
BssMI GATC 1 cut(s) 20
Bst2UI CCWGG 1 cut(s) 51
Bst6I CTCTTC 2 cut(s) 19, 82
BstC8I GCNNGC 1 cut(s) 175
BstENI CCTNNNNNAGG 1 cut(s) 171
BstKTI GATC 1 cut(s) 23
BstMAI GTCTC 2 cut(s) 132, 264
BstMBI GATC 1 cut(s) 20
BstNI CCWGG 1 cut(s) 51
BstSCI CCNGG 2 cut(s) 49, 120
BsuRI GGCC 2 cut(s) 54, 166
BtsIMutI CAGTG 1 cut(s) 68
Cac8I GCNNGC 1 cut(s) 175
Cfr13I GGNCC 1 cut(s) 53
CviJI RGCY 4 cut(s) 54, 166, 177, 201
CviKI_1 RGCY 4 cut(s) 54, 166, 177, 201
DpnI GATC 1 cut(s) 22
DpnII GATC 1 cut(s) 20
DraI TTTAAA 1 cut(s) 183
Eam1104I CTCTTC 2 cut(s) 19, 82
EarI CTCTTC 2 cut(s) 19, 82
Eco147I AGGCCT 1 cut(s) 166
Eco31I GGTCTC 1 cut(s) 132
EcoNI CCTNNNNNAGG 1 cut(s) 171
EcoRII CCWGG 1 cut(s) 49
FaiI YATR 6 cut(s) 153, 191, 237, 239, 244, 252
FaqI GGGAC 1 cut(s) 104
FauNDI CATATG 1 cut(s) 237
FspBI CTAG 1 cut(s) 170
HaeIII GGCC 2 cut(s) 54, 166
HapII CCGG 1 cut(s) 122
HinfI GANTC 2 cut(s) 5, 105
HpaII CCGG 1 cut(s) 122
HphI GGTGA 2 cut(s) 23, 85
Hpy188III TCNNGA 2 cut(s) 18, 102
HpyCH4V TGCA 2 cut(s) 62, 83
Kzo9I GATC 1 cut(s) 20
LweI GCATC 1 cut(s) 71
MaeI CTAG 1 cut(s) 170
MalI GATC 1 cut(s) 22
MboI GATC 1 cut(s) 20
MboII GAAGA 2 cut(s) 6, 99
MluCI AATT 1 cut(s) 157
MnlI CCTC 5 cut(s) 44, 48, 177, 221, 224
MseI TTAA 1 cut(s) 182
MspI CCGG 1 cut(s) 122
MspR9I CCNGG 2 cut(s) 51, 122
MvaI CCWGG 1 cut(s) 51
NciI CCSGG 1 cut(s) 122
NdeI CATATG 1 cut(s) 237
NdeII GATC 1 cut(s) 20
PceI AGGCCT 1 cut(s) 166
PfeI GAWTC 1 cut(s) 105
PfoI TCCNGGA 1 cut(s) 120
Psp6I CCWGG 1 cut(s) 49
PspGI CCWGG 1 cut(s) 49
PspPI GGNCC 1 cut(s) 53
SaqAI TTAA 1 cut(s) 182
Sau3AI GATC 1 cut(s) 20
Sau96I GGNCC 1 cut(s) 53
ScrFI CCNGG 2 cut(s) 51, 122
SetI ASST 1 cut(s) 36
SfaNI GCATC 1 cut(s) 71
Sse9I AATT 1 cut(s) 157
SseBI AGGCCT 1 cut(s) 166
SspMI CTAG 1 cut(s) 170
StuI AGGCCT 1 cut(s) 166
StyD4I CCNGG 2 cut(s) 49, 120
TasI AATT 1 cut(s) 157
TfiI GAWTC 1 cut(s) 105
Tru1I TTAA 1 cut(s) 182
Tru9I TTAA 1 cut(s) 182
TscAI CASTG 1 cut(s) 75
TspDTI ATGAA 1 cut(s) 118
TspGWI ACGGA 1 cut(s) 150
TspRI CASTG 1 cut(s) 75
XagI CCTNNNNNAGG 1 cut(s) 171
XspI CTAG 1 cut(s) 170
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.