Rh7CG029100

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7C
OG0015351
Physical Location & Seq
Reverse (-)
2083269 .. 2085986
2718 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7CG029100.1

Sequence Viewer

Length: 1464 bp
ATGTTCACTCTGCTTCGCAAAACCCCATCACTGAAAAACCCAGAACCCAGTTTCTCAATTCCACTACATCAAAACCTAACCACCTCACCACAACCGGCTCAAGACGCCGCCTTTGCCACCCTTATCCTCAAATCCGACCCGCAATCTCTCCCCCGGATCCTCCACGACCCGAACATCCACTGGACCCCCGACTCCGTCAACAAAACCCTCAAACGCCTCTGGAACCATGGCCCTAAAGCCCTCGTCTTCTTCAAAACCCTCGACCGCCACCCCACCTACACCCACTCCTCCTCCTCCTACGACCACGCCGTCGACATCGCCGGCCGTTTACGCGACTACAAGTCCCTTTGGGCCTTCGTCGCCCGAATGCGCGCCCGCCGGGTCGGCCCGGGTCCGAGAACCTTCGCCATCATCGCCGAGAGGTACGTCGCCGCCGGCAAACCCGATAGAGCTGTCAAAGTTTTTCTCTCTATGCATGAACATGGGTGCCCTCAGGATTTGAATTCTTTCAATACTGTTCTTGATGTGCTCTGTAAAGCTAAGCGAGTTGAAAAGGCTTACAATTTGTTTAAAGTGTTTAGGGGAAGATTTAGAGCTGATTGTGTTAGTTACAATGTGATTGTTAATGGGTGGTGTTTGATTAAGAGGACTCCTAAGGCATTAGAGGTTTTGAGGGAGATGGTTGAGAGAGGAATCGAGCCGAGTTTGGTTACTTATAATGTGATGCTTAAAGGGTATCTTAGAGCTGGGCAGGTTAAGGAGGCGTGGGAGTTTTTTTTGGAAATGAAGAAGAGGAAGTGTGAGATTGATGTTGTTACTTATACTACTCTGGTTCATGGGTTTGGTGTTGTCGGGGAGGTTAAGAAGGCGAGGAGGATTTTCGATGGGATGGTTGAGGAGGGGGTCCTGCCTTCGGTTGCGACTTACAATGCGTTGATTCAGGTTTTGTGTAAGAAGGATAGCGTGGAGAATGCGGTGGTGGTTTTTGAGGAGATGGTGAGTAAGGGTTATGTGCCTAATGTGACGACGTATAATGTGTTGATTAGAGGGCTGTGTCATGCTGGTGATATGGAGAGGGGGATGGAGTTGATGGGGAGGATGAAGGGTGATGAGTGTGAGCCGAATGTTCAGACGTATAATGTTGTGATTCGGTACTTTTGTGATGATGGGGAGATTGATAAGGCGTTGGATGTGTTTGAGAAGATGGGTAGGGGAGAGTGCTTGCCTAATTTGGATACATACAATGTGTTGATTAGTGCCATGTTTGTGAGGAAGAAACCTGAAGATTTGTTAGTGGCAGGGAAGTTGCTGATTGAGATGGTTGATAGAGGATTTTTGCCCCGCAAGTACACCTTTAATCGGGTTCTGGATGGGCTTTTGTTAACTGGTAATCAAGGTTTTGCAAAAGAGATTCTGAGATTGCAGAGCAAATGTGGCCGTCTTCCTCGTCAGGTGAAATTATAA

Protein Analysis

487

Amino Acids

55.35

Weight (kDa)

9.38

Isoelectric Point (pI)

34.34

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_3 PF13812 197 - 246 1.9e-07 Pentatricopeptide repeat domain
PPR_2 PF13041 200 - 246 3.5e-12 PPR repeat family
PPR_3 PF13812 223 - 268 6.7e-09 Pentatricopeptide repeat domain
PPR_1 PF12854 230 - 263 5.9e-08 PPR repeat
PPR_2 PF13041 234 - 281 5.9e-19 PPR repeat family
PPR PF01535 237 - 267 4.8e-09 PPR repeat
TPR_24 PF23276 255 - 363 1.7e-09 Fungal tetratrico peptide repeats
PPR_3 PF13812 260 - 316 3.4e-13 Pentatricopeptide repeat domain
PPR_1 PF12854 266 - 298 1.9e-07 PPR repeat
PPR PF01535 272 - 302 1e-05 PPR repeat
PPR_long PF17177 286 - 417 4e-14 Pentacotripeptide-repeat region of PRORP
PPR_1 PF12854 301 - 333 4.8e-09 PPR repeat
PPR_2 PF13041 304 - 353 2.8e-18 PPR repeat family
PPR PF01535 308 - 336 6.6e-07 PPR repeat
PPR_3 PF13812 328 - 386 4.6e-13 Pentatricopeptide repeat domain
PPR_1 PF12854 335 - 368 3.4e-09 PPR repeat
PPR_2 PF13041 339 - 388 6e-15 PPR repeat family
PPR PF01535 343 - 372 5.2e-07 PPR repeat
PPR_1 PF12854 371 - 402 1.6e-09 PPR repeat
PPR_2 PF13041 374 - 421 1.3e-14 PPR repeat family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0015351)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G74900
fragaria_vesca FvH4_5g16320
malus_domestica MD06G1181800.v1.1 MD14G1187700.v1.1
prunus_persica Prupe.5G180100_v2.0.a1
pyrus_communis pycom06g16080 pycom14g15560
rosa_chinensis RchiOBHm_Chr7g0179811
rosa_laevigata RLG00000005322
rosa_multiflora Rmu_sc0001754.1_g000006 Rmu_sc0004156.1_g000009
rosa_roxburghii Rroxscaffold_3G00273450
rosa_rugosa Rorug06G0428500
rosa_samantha Rh7CG029100 Rh7DG028600
rosa_wichuraiana Rw7G002250

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 717, 1462
AasI GACNNNNNNGTC 1 cut(s) 308
Acc36I ACCTGC 1 cut(s) 742
AccB1I GGYRCC 1 cut(s) 486
AccI GTMKAC 1 cut(s) 312
AccII CGCG 2 cut(s) 333, 372
AciI CCGC 7 cut(s) 108, 140, 265, 376, 432, 974, 1342
AclWI GGATC 2 cut(s) 151, 164
AcoI YGGCCR 2 cut(s) 322, 1435
AcsI RAATTY 1 cut(s) 502
AcuI CTGAAG 1 cut(s) 1302
AcyI GRCGYC 1 cut(s) 105
AfaI GTAC 3 cut(s) 425, 1154, 1349
AfiI CCNNNNNNNGG 2 cut(s) 913, 1359
AgsI TTSAA 4 cut(s) 253, 502, 511, 551
AhdI GACNNNNNGTC 1 cut(s) 340
AluBI AGCT 4 cut(s) 452, 539, 596, 746
AluI AGCT 4 cut(s) 452, 539, 596, 746
Alw21I GWGCWC 1 cut(s) 531
AlwI GGATC 2 cut(s) 151, 164
Ama87I CYCGRG 1 cut(s) 388
AoxI GGCC 5 cut(s) 229, 322, 351, 385, 1435
ApoI RAATTY 1 cut(s) 502
ArsI GACNNNNNNTTYG 2 cut(s) 95, 127
Asp700I GAANNNNTTC 1 cut(s) 506
AspLEI GCGC 2 cut(s) 372, 374
AspS9I GGNCC 6 cut(s) 183, 230, 351, 386, 392, 904
AsuC2I CCSGG 4 cut(s) 154, 380, 389, 390
AsuHPI GGTGA 4 cut(s) 78, 1009, 1076, 1118
AvaI CYCGRG 1 cut(s) 388
AvaII GGWCC 3 cut(s) 183, 392, 904
AxyI CCTNAGG 2 cut(s) 492, 654
BaeGI GKGCMC 1 cut(s) 491
BaeI ACNNNNGTAYC 2 cut(s) 1144, 1177
BamHI GGATCC 1 cut(s) 156
BanI GGYRCC 1 cut(s) 486
BbsI GAAGAC 2 cut(s) 238, 1433
Bbv12I GWGCWC 1 cut(s) 531
BceAI ACGGC 3 cut(s) 293, 309, 1422
BciVI GTATCC 1 cut(s) 1228
BcnI CCSGG 4 cut(s) 154, 380, 389, 390
BfuAI ACCTGC 1 cut(s) 742
BfuI GTATCC 1 cut(s) 1228
BglI GCCNNNNNGGC 1 cut(s) 384
BisI GCNGC 2 cut(s) 108, 432
BlpI GCTNAGC 1 cut(s) 540
BlsI GCNGC 2 cut(s) 109, 433
Bme1390I CCNGG 4 cut(s) 154, 380, 389, 390
Bme18I GGWCC 3 cut(s) 183, 392, 904
BmeRI GACNNNNNGTC 1 cut(s) 340
BmeT110I CYCGRG 1 cut(s) 388
BmgT120I GGNCC 6 cut(s) 183, 230, 351, 386, 392, 904
BmiI GGNNCC 6 cut(s) 158, 185, 224, 393, 488, 905
BmrFI CCNGG 4 cut(s) 154, 380, 389, 390
BmrI ACTGGG 1 cut(s) 42
BmsI GCATC 1 cut(s) 714
BmuI ACTGGG 1 cut(s) 42
BpiI GAAGAC 2 cut(s) 238, 1433
Bpu1102I GCTNAGC 1 cut(s) 540
BpuEI CTTGAG 1 cut(s) 84
BpuMI CCSGG 4 cut(s) 154, 380, 389, 390
BsaHI GRCGYC 1 cut(s) 105
BsaJI CCNNGG 3 cut(s) 152, 226, 388
BsaXI ACNNNNNCTCC 4 cut(s) 269, 275, 299, 305
Bsc4I CCNNNNNNNGG 2 cut(s) 913, 1359
Bse118I RCCGGY 3 cut(s) 94, 320, 434
Bse1I ACTGG 3 cut(s) 48, 185, 1390
Bse21I CCTNAGG 2 cut(s) 492, 654
BseDI CCNNGG 3 cut(s) 152, 226, 388
BseGI GGATG 6 cut(s) 174, 894, 1086, 1104, 1195, 1375
BseLI CCNNNNNNNGG 2 cut(s) 913, 1359
BseMII CTCAG 2 cut(s) 506, 1406
BseNI ACTGG 3 cut(s) 48, 185, 1390
BsePI GCGCGC 1 cut(s) 370
BseRI GAGGAG 6 cut(s) 277, 280, 283, 886, 911, 1004
BseSI GKGCMC 1 cut(s) 491
BseX3I CGGCCG 1 cut(s) 322
BseYI CCCAGC 1 cut(s) 746
Bsh1236I CGCG 2 cut(s) 333, 372
Bsh1285I CGRYCG 2 cut(s) 265, 325
BshFI GGCC 5 cut(s) 231, 324, 353, 387, 1437
BshNI GGYRCC 1 cut(s) 486
BsiEI CGRYCG 2 cut(s) 265, 325
BsiHKAI GWGCWC 1 cut(s) 531
BsiHKCI CYCGRG 1 cut(s) 388
BsiSI CCGG 6 cut(s) 95, 154, 321, 379, 389, 435
BslFI GGGAC 1 cut(s) 328
BslI CCNNNNNNNGG 2 cut(s) 913, 1359
BsmFI GGGAC 1 cut(s) 328
BsmI GAATGC 2 cut(s) 372, 976
BsnI GGCC 5 cut(s) 231, 324, 353, 387, 1437
BsoBI CYCGRG 1 cut(s) 388
Bsp1286I GDGCHC 2 cut(s) 491, 531
Bsp143I GATC 1 cut(s) 156
Bsp1720I GCTNAGC 1 cut(s) 540
Bsp19I CCATGG 1 cut(s) 226
BspACI CCGC 7 cut(s) 108, 140, 265, 376, 432, 974, 1342
BspANI GGCC 5 cut(s) 231, 324, 353, 387, 1437
BspCNI CTCAG 2 cut(s) 505, 1407
BspFNI CGCG 2 cut(s) 333, 372
BspLI GGNNCC 6 cut(s) 158, 185, 224, 393, 488, 905
BspMI ACCTGC 1 cut(s) 742
BspPI GGATC 2 cut(s) 151, 164
BspT107I GGYRCC 1 cut(s) 486
BsrFI RCCGGY 3 cut(s) 94, 320, 434
BsrI ACTGG 3 cut(s) 48, 185, 1390
BssAI RCCGGY 3 cut(s) 94, 320, 434
BssECI CCNNGG 3 cut(s) 152, 226, 388
BssHII GCGCGC 1 cut(s) 370
BssMI GATC 1 cut(s) 156
BssNI GRCGYC 1 cut(s) 105
BssT1I CCWWGG 1 cut(s) 226
Bst4CI ACNGT 1 cut(s) 517
Bst6I CTCTTC 1 cut(s) 785
BstACI GRCGYC 1 cut(s) 105
BstC8I GCNNGC 5 cut(s) 322, 372, 376, 436, 1223
BstDEI CTNAG 5 cut(s) 492, 540, 654, 740, 1415
BstDSI CCRYGG 1 cut(s) 226
BstF5I GGATG 6 cut(s) 174, 894, 1086, 1104, 1195, 1375
BstFNI CGCG 2 cut(s) 333, 372
BstHHI GCGC 2 cut(s) 372, 374
BstKTI GATC 1 cut(s) 159
BstMBI GATC 1 cut(s) 156
BstMCI CGRYCG 2 cut(s) 265, 325
BstMWI GCNNNNNNNGC 7 cut(s) 104, 113, 330, 359, 384, 413, 1434
BstSCI CCNGG 4 cut(s) 152, 378, 387, 388
BstSLI GKGCMC 1 cut(s) 491
BstUI CGCG 2 cut(s) 333, 372
BstV2I GAAGAC 2 cut(s) 238, 1433
BstX2I RGATCY 1 cut(s) 156
BstYI RGATCY 1 cut(s) 156
BstZI CGGCCG 1 cut(s) 322
Bsu36I CCTNAGG 2 cut(s) 492, 654
BsuI GTATCC 1 cut(s) 1228
BsuRI GGCC 5 cut(s) 231, 324, 353, 387, 1437
BtgI CCRYGG 1 cut(s) 226
BtgZI GCGATG 2 cut(s) 301, 397
BtsCI GGATG 6 cut(s) 174, 894, 1086, 1104, 1195, 1375
BtsIMutI CAGTG 2 cut(s) 29, 178
BveI ACCTGC 1 cut(s) 742
Cac8I GCNNGC 5 cut(s) 322, 372, 376, 436, 1223
CfoI GCGC 2 cut(s) 372, 374
Cfr10I RCCGGY 3 cut(s) 94, 320, 434
Cfr13I GGNCC 6 cut(s) 183, 230, 351, 386, 392, 904
Cfr9I CCCGGG 1 cut(s) 388
CseI GACGC 1 cut(s) 113
Csp6I GTAC 3 cut(s) 424, 1153, 1348
CviAII CATG 6 cut(s) 227, 476, 482, 836, 1058, 1261
CviQI GTAC 3 cut(s) 424, 1153, 1348
DdeI CTNAG 5 cut(s) 492, 540, 654, 740, 1415
DpnI GATC 1 cut(s) 158
DpnII GATC 1 cut(s) 156
DraI TTTAAA 1 cut(s) 571
DrdI GACNNNNNNGTC 1 cut(s) 308
DriI GACNNNNNGTC 1 cut(s) 340
DseDI GACNNNNNNGTC 1 cut(s) 308
EaeI YGGCCR 2 cut(s) 322, 1435
EagI CGGCCG 1 cut(s) 322
Eam1104I CTCTTC 1 cut(s) 785
Eam1105I GACNNNNNGTC 1 cut(s) 340
EarI CTCTTC 1 cut(s) 785
EclXI CGGCCG 1 cut(s) 322
Eco130I CCWWGG 1 cut(s) 226
Eco47I GGWCC 3 cut(s) 183, 392, 904
Eco52I CGGCCG 1 cut(s) 322
Eco57I CTGAAG 1 cut(s) 1302
Eco81I CCTNAGG 2 cut(s) 492, 654
Eco88I CYCGRG 1 cut(s) 388
EcoO109I RGGNCCY 1 cut(s) 904
EcoRI GAATTC 1 cut(s) 502
EcoT14I CCWWGG 1 cut(s) 226
EcoT22I ATGCAT 1 cut(s) 477
ErhI CCWWGG 1 cut(s) 226
FaeI CATG 6 cut(s) 230, 479, 485, 839, 1061, 1264
FalI AAGNNNNNCTT 4 cut(s) 723, 755, 1337, 1369
FaqI GGGAC 1 cut(s) 328
FatI CATG 6 cut(s) 226, 475, 481, 835, 1057, 1260
FauI CCCGC 3 cut(s) 147, 383, 1349
FblI GTMKAC 1 cut(s) 312
Fnu4HI GCNGC 2 cut(s) 108, 432
FokI GGATG 6 cut(s) 161, 901, 1093, 1111, 1202, 1382
Fsp4HI GCNGC 2 cut(s) 108, 432
GlaI GCGC 2 cut(s) 371, 373
GluI GCNGC 2 cut(s) 108, 432
GsaI CCCAGC 1 cut(s) 750
HaeIII GGCC 5 cut(s) 231, 324, 353, 387, 1437
HapII CCGG 6 cut(s) 95, 154, 321, 379, 389, 435
HgaI GACGC 1 cut(s) 113
HhaI GCGC 2 cut(s) 372, 374
Hin1I GRCGYC 1 cut(s) 105
Hin1II CATG 6 cut(s) 230, 479, 485, 839, 1061, 1264
Hin6I GCGC 2 cut(s) 370, 372
HinP1I GCGC 2 cut(s) 370, 372
HincII GTYRAC 3 cut(s) 199, 313, 1383
HindII GTYRAC 3 cut(s) 199, 313, 1383
HinfI GANTC 6 cut(s) 191, 649, 693, 937, 1147, 1411
HpaI GTTAAC 1 cut(s) 1383
HpaII CCGG 6 cut(s) 95, 154, 321, 379, 389, 435
HphI GGTGA 4 cut(s) 78, 1009, 1076, 1118
Hpy166II GTNNAC 6 cut(s) 6, 199, 313, 329, 1350, 1383
Hpy188I TCNGA 4 cut(s) 136, 396, 1131, 1416
Hpy188III TCNNGA 5 cut(s) 101, 220, 494, 521, 1367
Hpy8I GTNNAC 6 cut(s) 6, 199, 313, 329, 1350, 1383
Hpy99I CGWCG 4 cut(s) 314, 362, 431, 1030
HpyAV CCTTC 6 cut(s) 364, 412, 859, 921, 949, 1096
HpyCH4III ACNGT 1 cut(s) 517
HpyCH4IV ACGT 3 cut(s) 426, 1028, 1133
HpyCH4V TGCA 3 cut(s) 475, 1403, 1423
HpyF10VI GCNNNNNNNGC 7 cut(s) 104, 113, 330, 359, 384, 413, 1434
HpyF3I CTNAG 5 cut(s) 492, 540, 654, 740, 1415
HpySE526I ACGT 3 cut(s) 426, 1028, 1133
Hsp92I GRCGYC 1 cut(s) 105
Hsp92II CATG 6 cut(s) 230, 479, 485, 839, 1061, 1264
HspAI GCGC 2 cut(s) 370, 372
KroI GCCGGC 2 cut(s) 320, 434
KroNI GCCGGC 2 cut(s) 322, 436
KspAI GTTAAC 1 cut(s) 1383
Kzo9I GATC 1 cut(s) 156
LweI GCATC 1 cut(s) 714
MaeII ACGT 3 cut(s) 426, 1028, 1133
MaeIII GTNAC 4 cut(s) 608, 709, 814, 1021
MalI GATC 1 cut(s) 158
MboI GATC 1 cut(s) 156
MboII GAAGA 9 cut(s) 238, 241, 597, 799, 802, 1213, 1285, 1295, 1433
MflI RGATCY 1 cut(s) 156
MhlI GDGCHC 2 cut(s) 491, 531
MluCI AATT 5 cut(s) 57, 502, 562, 1228, 1457
MlyI GAGTC 2 cut(s) 185, 643
MmeI TCCRAC 2 cut(s) 159, 1167
Mph1103I ATGCAT 1 cut(s) 477
MroNI GCCGGC 2 cut(s) 320, 434
MroXI GAANNNNTTC 1 cut(s) 506
MseI TTAA 8 cut(s) 570, 624, 642, 729, 756, 861, 1356, 1382
MslI CAYNNNNRTG 3 cut(s) 480, 1062, 1265
MspI CCGG 6 cut(s) 95, 154, 321, 379, 389, 435
MspR9I CCNGG 4 cut(s) 154, 380, 389, 390
Mva1269I GAATGC 2 cut(s) 372, 976
MvnI CGCG 2 cut(s) 333, 372
MwoI GCNNNNNNNGC 7 cut(s) 104, 113, 330, 359, 384, 413, 1434
NaeI GCCGGC 2 cut(s) 322, 436
NciI CCSGG 4 cut(s) 154, 380, 389, 390
NcoI CCATGG 1 cut(s) 226
NdeII GATC 1 cut(s) 156
NgoMIV GCCGGC 2 cut(s) 320, 434
NlaIII CATG 6 cut(s) 230, 479, 485, 839, 1061, 1264
NlaIV GGNNCC 6 cut(s) 158, 185, 224, 393, 488, 905
NmeAIII GCCGAG 2 cut(s) 442, 726
NmuCI GTSAC 1 cut(s) 1021
NsiI ATGCAT 1 cut(s) 477
PauI GCGCGC 1 cut(s) 370
PcsI WCGNNNNNNNCGW 1 cut(s) 306
PctI GAATGC 2 cut(s) 372, 976
PdiI GCCGGC 2 cut(s) 322, 436
PdmI GAANNNNTTC 1 cut(s) 506
PfeI GAWTC 4 cut(s) 693, 937, 1147, 1411
PflFI GACNNNGTC 1 cut(s) 194
PkrI GCNGC 2 cut(s) 109, 433
PleI GAGTC 2 cut(s) 185, 643
PpsI GAGTC 2 cut(s) 185, 643
PpuMI RGGWCCY 1 cut(s) 904
PsiI TTATAA 2 cut(s) 717, 1462
Psp5II RGGWCCY 1 cut(s) 904
PspFI CCCAGC 1 cut(s) 746
PspN4I GGNNCC 6 cut(s) 158, 185, 224, 393, 488, 905
PspPI GGNCC 6 cut(s) 183, 230, 351, 386, 392, 904
PspPPI RGGWCCY 1 cut(s) 904
PsuI RGATCY 1 cut(s) 156
PsyI GACNNNGTC 1 cut(s) 194
PteI GCGCGC 1 cut(s) 370
RsaI GTAC 3 cut(s) 425, 1154, 1349
RsaNI GTAC 3 cut(s) 424, 1153, 1348
RseI CAYNNNNRTG 3 cut(s) 480, 1062, 1265
SalI GTCGAC 1 cut(s) 311
SaqAI TTAA 8 cut(s) 570, 624, 642, 729, 756, 861, 1356, 1382
SatI GCNGC 2 cut(s) 108, 432
Sau3AI GATC 1 cut(s) 156
Sau96I GGNCC 6 cut(s) 183, 230, 351, 386, 392, 904
SchI GAGTC 2 cut(s) 185, 643
ScrFI CCNGG 4 cut(s) 154, 380, 389, 390
SduI GDGCHC 2 cut(s) 491, 531
SfaNI GCATC 1 cut(s) 714
SinI GGWCC 3 cut(s) 183, 392, 904
SmaI CCCGGG 1 cut(s) 390
SmiMI CAYNNNNRTG 3 cut(s) 480, 1062, 1265
SmlI CTYRAG 1 cut(s) 99
SmoI CTYRAG 1 cut(s) 99
Sse9I AATT 5 cut(s) 57, 502, 562, 1228, 1457
SsiI CCGC 7 cut(s) 108, 140, 265, 376, 432, 974, 1342
StyD4I CCNGG 4 cut(s) 152, 378, 387, 388
StyI CCWWGG 1 cut(s) 226
TaaI ACNGT 1 cut(s) 517
TaiI ACGT 3 cut(s) 429, 1031, 1136
TaqI TCGA 4 cut(s) 261, 312, 696, 882
TasI AATT 5 cut(s) 57, 502, 562, 1228, 1457
TatI WGTACW 1 cut(s) 1347
TauI GCSGC 2 cut(s) 110, 434
TfiI GAWTC 4 cut(s) 693, 937, 1147, 1411
Tru1I TTAA 8 cut(s) 570, 624, 642, 729, 756, 861, 1356, 1382
Tru9I TTAA 8 cut(s) 570, 624, 642, 729, 756, 861, 1356, 1382
TscAI CASTG 2 cut(s) 36, 185
TseFI GTSAC 1 cut(s) 1021
Tsp45I GTSAC 1 cut(s) 1021
TspDTI ATGAA 4 cut(s) 492, 800, 824, 1115
TspGWI ACGGA 1 cut(s) 184
TspMI CCCGGG 1 cut(s) 388
TspRI CASTG 2 cut(s) 36, 185
Tth111I GACNNNGTC 1 cut(s) 194
VpaK11BI GGWCC 3 cut(s) 183, 392, 904
XapI RAATTY 1 cut(s) 502
XmaI CCCGGG 1 cut(s) 388
XmiI GTMKAC 1 cut(s) 312
XmnI GAANNNNTTC 1 cut(s) 506
Zsp2I ATGCAT 1 cut(s) 477
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.