Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7C

Orthogroup ID

OG0012727

Physical Location & Seq

Genomic Coordinates Forward (+)

3059983 .. 3066392

Gene Structure 6410 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7CG045500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2061 bp

ATGATGCAGGCAGAAGATGTCATTGTTGTTGCAACTGATGGCTTGTTTCACAATTTGTTCCAGACAAAGTCTCAGAGTCTCCGGCTTTATCTTCCTCAACCTCAGATTTCAGTCGGCAGCGGAAACAGGATGACTATACCTCAAACAAGAAACGTTGGGCTTCCATTGATGAACCTTATCAGATTAAAAGGAATTCCCATCCTGCAGCAGCTTCATTTAGAGGAGCAACTGCTTCGAACCTCGTATGATAATTGGTGCATTATAAATGATGGAACCAATAGTCCTAATATTGTCATGGGTATTTCAGGAAAGCCTGCAGAGCTTCTTGACGTTGATCTGGTGTTACGAGATCAGGTTCCTGTCATTAAAAGGTTTACTGGAGGTGGCACGGTTACAGTTGATAATGGCACGATATTTGTCACTTTCATATGCAACAGGGATGCTGTTCCTGGCTTGCAACTATATCCGCGACCTATAATGTCCTGGAGTAGCCAATTATACAGCAGAGTGTTCCAAGGATTTGGTGACTTTCACCTTCGTGAAAATGATTATGTATTTGGTAACCGCAAGTTTGGTGGTAATGCTCAATCTATTACTAAAAACCGGTGGATCCACCACACATCCTTTCTATGGGACTATGAGGTTAGGAACATGGCATACCTGAAGCTTCCAAAACGGGTTCCTGAATATCGATTGGCAAGGGACCATTTGGAATTCATATGCCGCATGAAAGACTACATACCAAGATCAGTTTTCATCGACAAAACCGTCGAGGCAATCAGTACCGAATTTTCAGTCAAATCTGAACAAACAGACCCATTCAAAACCAACTCAAACTTTGTGCCCTCAACTAGACTATTGACAAGGCAAGAGTTGGAAGAAGTAGCTTTGGCCTCTCAACCTGAGAGAGGGCCTCTCTCTGAGTCCCTGTCCTTGATGGGAAGGGTTAAGTTAAAGATAAAGAAATTGGAGAGCAGTGGCAATCGACAGGTTACTTATTCGAAACGGAGAAATGGCATCTTGAAAAAGGCCAAGGAGTTATCAATCTTATGTGATGTAGACATTACGCTTCTCATGTTTTCCCCAACTGGAAGGCCTACATTGTTCCAAGGGGAGCGCAGCAATTTTGAAGACATTATTGCAAAGTTTGCCCACTTAACTCCACAGGAGAGGGTGAAAAGGAAGTTGGAGAGCCTTGAAGTACTGAAGAAAACTTTTAAGAAGTTGGACCATGATGTAAATGTACAAGAGTTTGTGGGTTCCAGTACTCAGACAGTTGAGAATCTGACAAATCAAGCAAGGGCATTGCAAACCCAACTTACGGAACTGCATAAGAGACTGAGCTTTTGGAGTAATCCAGAGAAGGTTGATGACGTAGAACAGCTAAGGCAGATGGAAGACATGCTTAAGGAATCAATTAGTCGAACACATCTGCACAAGGAGAACTTTGAAAAACATCAACTAGCTTCACTGAATTGCACAGGCCAGTTTCAAAATGGGATGCCTTCATCTTTAATTGTGGGCAGTGTGCATGAAACTCAACCGATGCCTTGGATTTTGAATAATGACAATCAACATTTGATATTACCGAACGGGGCTTCCTTTCTGCCTCATAGAGACGTGGACTGCTCTACAAATGCCTCAGTAGCACAATTTAATAGTTACTTTGGCAGTGGCGCCAGCACTAGTACTAGCACTGGTAAACAATCTGAGGTTGGTGATCCAGGACAACTTGATAATATGGGGCACATTCCTAGTATGGAAGGAGGTTGTGGCTTGAATGAGTATGACATAAATGCTTGTTTAAGTACAGAACTTGGCCAGCAGTATGCGTATCCATCATATTGCAATCCTAATGTGCCAGACGATAAAAAATTGAAGCCTGGTGTGGAAATGAACTTACCAACAAATTCGGTGGATTATCAAGCAAGTAGCAACTTCGAACTGTCTCGATCTTTGTATGGTGATGAGCATCCTTCTTGGCTTTCATCTTCCGGGCCTAGCACCATTGCTGTATATGACCAGAATACGTACCAGCAGCAACCAAACATGAGATTGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001558 GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007275 GO:0008150 GO:0009555 GO:0009889 GO:0010152 GO:0010468 GO:0010556 GO:0010769 GO:0019219 GO:0019222 GO:0021700 GO:0022603 GO:0022604 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0040008 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043900 GO:0044424 GO:0044464 GO:0045595 GO:0048229 GO:0048638 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0051128 GO:0051171 GO:0051239 GO:0051252 GO:0051510 GO:0060255 GO:0060284 GO:0065007 GO:0080090 GO:0080092 GO:0140110 GO:1903506 GO:2000112 GO:2000241 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko04010 ko04013 ko04022 ko04371 ko04921 ko05202 ko05418 map04010 map04013 map04022 map04371 map04921 map05202 map05418

Pfam Domains

Protein Families

SRF-TF

Protein Analysis

686

Amino Acids

77.57

Weight (kDa)

6.8

Isoelectric Point (pI)

40.19

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LplA-B_cat	PF21948	67 - 264	5.2e-28	Lipoyl protein ligase A/B catalytic domain
SRF-TF	PF00319	323 - 367	2.8e-21	SRF-type transcription factor (DNA-binding and dimerisation domain)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0012727)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_5g14780 FvH4_5g14780 FvH4_5g14780 FvH4_5g14780 FvH4_5g14780
malus_domestica	MD06G1194900.v1.1 MD14G1201900.v1.1
pyrus_communis	pycom06g17240 pycom14g16720
rosa_chinensis	RchiOBHm_Chr7g0181601
rosa_laevigata	RLG00000005180
rosa_roxburghii	Rroxscaffold_3G00271860
rosa_rugosa	Rorug06G0442400
rosa_samantha	Rh7AG044800 Rh7BG043800 Rh7CG045500 Rh7DG044400
rosa_wichuraiana	Rw7G003720

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	263
AasI	GACNNNNNNGTC	1 cut(s)	767
AccB1I	GGYRCC	1 cut(s)	1676
AccI	GTMKAC	1 cut(s)	1059
AccII	CGCG	1 cut(s)	469
AciI	CCGC	4 cut(s)	120, 467, 565, 724
AclI	AACGTT	1 cut(s)	153
AclWI	GGATC	3 cut(s)	604, 617, 1715
AcoI	YGGCCR	1 cut(s)	1819
AcsI	RAATTY	4 cut(s)	192, 713, 788, 1909
AcuI	CTGAAG	2 cut(s)	683, 1226
AcyI	GRCGYC	1 cut(s)	1677
AfaI	GTAC	7 cut(s)	784, 1203, 1245, 1267, 1690, 1810, 2033
AfiI	CCNNNNNNNGG	3 cut(s)	630, 908, 1321
AflII	CTTAAG	1 cut(s)	1406
AgeI	ACCGGT	1 cut(s)	603
AgsI	TTSAA	9 cut(s)	823, 1024, 1130, 1199, 1451, 1493, 1561, 1780, 1879
AhlI	ACTAGT	1 cut(s)	1685
AjiI	CACGTC	1 cut(s)	1621
AjnI	CCWGG	4 cut(s)	448, 482, 1723, 1882
AjuI	GAANNNNNNNTTGG	2 cut(s)	1169, 1201
AleI	CACNNNNGTG	1 cut(s)	537
AloI	GAACNNNNNNTCC	4 cut(s)	265, 297, 1583, 1615
AluBI	AGCT	7 cut(s)	211, 322, 667, 887, 1344, 1384, 1466
AluI	AGCT	7 cut(s)	211, 322, 667, 887, 1344, 1384, 1466
Alw26I	GTCTC	5 cut(s)	75, 83, 1330, 1611, 1953
AlwI	GGATC	3 cut(s)	604, 617, 1715
AoxI	GGCC	7 cut(s)	891, 911, 1029, 1094, 1483, 1819, 1997
ApeKI	GCWGC	5 cut(s)	117, 205, 208, 1119, 2038
ApoI	RAATTY	4 cut(s)	192, 713, 788, 1909
ArsI	GACNNNNNNTTYG	4 cut(s)	780, 812, 1329, 1361
AsiGI	ACCGGT	1 cut(s)	603
AspLEI	GCGC	2 cut(s)	1119, 1679
AspS9I	GGNCC	4 cut(s)	703, 911, 1228, 1997
AsuC2I	CCSGG	1 cut(s)	1996
AsuHPI	GGTGA	5 cut(s)	524, 536, 1186, 1730, 1976
AsuII	TTCGAA	3 cut(s)	235, 1001, 1941
AvaII	GGWCC	2 cut(s)	703, 1228
BaeGI	GKGCMC	2 cut(s)	846, 1749
BalI	TGGCCA	1 cut(s)	1821
BamHI	GGATCC	1 cut(s)	609
BanI	GGYRCC	1 cut(s)	1676
BbsI	GAAGAC	2 cut(s)	1137, 1404
BbvI	GCAGC	5 cut(s)	129, 217, 220, 1131, 2050
BccI	CCATC	6 cut(s)	32, 206, 263, 931, 1387, 1846
BcgI	CGANNNNNNTGC	2 cut(s)	215, 249
BciT130I	CCWGG	4 cut(s)	450, 484, 1725, 1884
BciVI	GTATCC	1 cut(s)	1845
BcnI	CCSGG	1 cut(s)	1996
BcoDI	GTCTC	5 cut(s)	75, 83, 1330, 1611, 1953
BcuI	ACTAGT	1 cut(s)	1685
BfaI	CTAG	6 cut(s)	852, 1463, 1686, 1692, 1755, 2001
BfmI	CTRYAG	2 cut(s)	203, 315
BfoI	RGCGCY	1 cut(s)	1680
BfrI	CTTAAG	1 cut(s)	1406
BfuI	GTATCC	1 cut(s)	1845
BisI	GCNGC	6 cut(s)	118, 206, 209, 724, 1120, 2039
BlsI	GCNGC	6 cut(s)	119, 207, 210, 725, 1121, 2040
BmcAI	AGTACT	3 cut(s)	1203, 1267, 1690
Bme1390I	CCNGG	5 cut(s)	450, 484, 1725, 1884, 1996
Bme18I	GGWCC	2 cut(s)	703, 1228
BmgBI	CACGTC	1 cut(s)	1621
BmgT120I	GGNCC	4 cut(s)	703, 911, 1228, 1997
BmiI	GGNNCC	7 cut(s)	274, 357, 611, 681, 704, 1261, 1678
BmrFI	CCNGG	5 cut(s)	450, 484, 1725, 1884, 1996
BmsI	GCATC	5 cut(s)	430, 1026, 1491, 1536, 1981
BpiI	GAAGAC	2 cut(s)	1137, 1404
BplI	GAGNNNNNCTC	4 cut(s)	898, 930, 900, 932
BpmI	CTGGAG	2 cut(s)	399, 505
Bpu10I	CCTNAGC	1 cut(s)	1385
Bpu14I	TTCGAA	3 cut(s)	235, 1001, 1941
BpuMI	CCSGG	1 cut(s)	1996
Bsa29I	ATCGAT	1 cut(s)	691
BsaAI	YACGTR	1 cut(s)	2031
BsaBI	GATNNNNATC	1 cut(s)	1971
BsaHI	GRCGYC	1 cut(s)	1677
BsaJI	CCNNGG	4 cut(s)	514, 1032, 1108, 1550
BsaWI	WCCGGW	1 cut(s)	603
Bsc4I	CCNNNNNNNGG	3 cut(s)	630, 908, 1321
Bse118I	RCCGGY	1 cut(s)	603
Bse1I	ACTGG	5 cut(s)	382, 1093, 1263, 1486, 1702
Bse3DI	GCAATG	2 cut(s)	1304, 2007
Bse8I	GATNNNNATC	1 cut(s)	1971
BseBI	CCWGG	4 cut(s)	450, 484, 1725, 1884
BseCI	ATCGAT	1 cut(s)	691
BseDI	CCNNGG	4 cut(s)	514, 1032, 1108, 1550
BseGI	GGATG	6 cut(s)	135, 198, 445, 620, 1506, 1972
BseJI	GATNNNNATC	1 cut(s)	1971
BseLI	CCNNNNNNNGG	3 cut(s)	630, 908, 1321
BseMI	GCAATG	2 cut(s)	1304, 2007
BseMII	CTCAG	8 cut(s)	86, 116, 894, 912, 1283, 1331, 1656, 1701
BseNI	ACTGG	5 cut(s)	382, 1093, 1263, 1486, 1702
BseRI	GAGGAG	1 cut(s)	236
BseSI	GKGCMC	2 cut(s)	846, 1749
BseXI	GCAGC	5 cut(s)	129, 217, 220, 1131, 2050
BsgI	GTGCAG	1 cut(s)	1418
Bsh1236I	CGCG	1 cut(s)	469
BshFI	GGCC	7 cut(s)	893, 913, 1031, 1096, 1485, 1821, 1999
BshNI	GGYRCC	1 cut(s)	1676
BshTI	ACCGGT	1 cut(s)	603
BshVI	ATCGAT	1 cut(s)	691
BsiSI	CCGG	3 cut(s)	82, 604, 1995
BslFI	GGGAC	3 cut(s)	647, 716, 910
BslI	CCNNNNNNNGG	3 cut(s)	630, 908, 1321
BsmAI	GTCTC	5 cut(s)	75, 83, 1330, 1611, 1953
BsmBI	CGTCTC	1 cut(s)	1611
BsmFI	GGGAC	3 cut(s)	647, 716, 910
BsnI	GGCC	7 cut(s)	893, 913, 1031, 1096, 1485, 1821, 1999
Bsp119I	TTCGAA	3 cut(s)	235, 1001, 1941
Bsp1286I	GDGCHC	2 cut(s)	846, 1749
Bsp1407I	TGTACA	1 cut(s)	1243
Bsp143I	GATC	6 cut(s)	334, 349, 609, 746, 1720, 1952
BspACI	CCGC	4 cut(s)	120, 467, 565, 724
BspANI	GGCC	7 cut(s)	893, 913, 1031, 1096, 1485, 1821, 1999
BspCNI	CTCAG	8 cut(s)	85, 115, 895, 913, 1282, 1332, 1655, 1702
BspDI	ATCGAT	1 cut(s)	691
BspFNI	CGCG	1 cut(s)	469
BspLI	GGNNCC	7 cut(s)	274, 357, 611, 681, 704, 1261, 1678
BspMAI	CTGCAG	2 cut(s)	207, 319
BspPI	GGATC	3 cut(s)	604, 617, 1715
BspT104I	TTCGAA	3 cut(s)	235, 1001, 1941
BspT107I	GGYRCC	1 cut(s)	1676
BspTI	CTTAAG	1 cut(s)	1406
BsrDI	GCAATG	2 cut(s)	1304, 2007
BsrFI	RCCGGY	1 cut(s)	603
BsrGI	TGTACA	1 cut(s)	1243
BsrI	ACTGG	5 cut(s)	382, 1093, 1263, 1486, 1702
BssAI	RCCGGY	1 cut(s)	603
BssECI	CCNNGG	4 cut(s)	514, 1032, 1108, 1550
BssMI	GATC	6 cut(s)	334, 349, 609, 746, 1720, 1952
BssNI	GRCGYC	1 cut(s)	1677
BssT1I	CCWWGG	4 cut(s)	514, 1032, 1108, 1550
Bst2UI	CCWGG	4 cut(s)	450, 484, 1725, 1884
Bst4CI	ACNGT	5 cut(s)	391, 397, 769, 1276, 1947
BstACI	GRCGYC	1 cut(s)	1677
BstAFI	CTTAAG	1 cut(s)	1406
BstAPI	GCANNNNNTGC	1 cut(s)	1148
BstAUI	TGTACA	1 cut(s)	1243
BstBAI	YACGTR	1 cut(s)	2031
BstBI	TTCGAA	3 cut(s)	235, 1001, 1941
BstC8I	GCNNGC	5 cut(s)	9, 315, 455, 1681, 1823
BstDEI	CTNAG	9 cut(s)	72, 102, 903, 921, 1269, 1340, 1385, 1642, 1710
BstEII	GGTNACC	1 cut(s)	560
BstENI	CCTNNNNNAGG	1 cut(s)	906
BstF5I	GGATG	6 cut(s)	135, 198, 445, 620, 1506, 1972
BstFNI	CGCG	1 cut(s)	469
BstH2I	RGCGCY	1 cut(s)	1680
BstHHI	GCGC	2 cut(s)	1119, 1679
BstKTI	GATC	6 cut(s)	337, 352, 612, 749, 1723, 1955
BstMAI	GTCTC	5 cut(s)	75, 83, 1330, 1611, 1953
BstMBI	GATC	6 cut(s)	334, 349, 609, 746, 1720, 1952
BstMWI	GCNNNNNNNGC	3 cut(s)	319, 1148, 1646
BstNI	CCWGG	4 cut(s)	450, 484, 1725, 1884
BstNSI	RCATGY	1 cut(s)	1405
BstPI	GGTNACC	1 cut(s)	560
BstSCI	CCNGG	5 cut(s)	448, 482, 1723, 1882, 1994
BstSFI	CTRYAG	2 cut(s)	203, 315
BstSLI	GKGCMC	2 cut(s)	846, 1749
BstSNI	TACGTA	1 cut(s)	2031
BstUI	CGCG	1 cut(s)	469
BstV1I	GCAGC	5 cut(s)	129, 217, 220, 1131, 2050
BstV2I	GAAGAC	2 cut(s)	1137, 1404
BstX2I	RGATCY	1 cut(s)	609
BstXI	CCANNNNNNTGG	1 cut(s)	521
BstYI	RGATCY	1 cut(s)	609
Bsu15I	ATCGAT	1 cut(s)	691
BsuI	GTATCC	1 cut(s)	1845
BsuRI	GGCC	7 cut(s)	893, 913, 1031, 1096, 1485, 1821, 1999
BsuTUI	ATCGAT	1 cut(s)	691
BtrI	CACGTC	1 cut(s)	1621
BtsCI	GGATG	6 cut(s)	135, 198, 445, 620, 1506, 1972
BtsI	GCAGTG	3 cut(s)	982, 1531, 1678
BtsIMutI	CAGTG	5 cut(s)	982, 1469, 1531, 1678, 1695
Cac8I	GCNNGC	5 cut(s)	9, 315, 455, 1681, 1823
CfoI	GCGC	2 cut(s)	1119, 1679
Cfr10I	RCCGGY	1 cut(s)	603
Cfr13I	GGNCC	4 cut(s)	703, 911, 1228, 1997
ClaI	ATCGAT	1 cut(s)	691
Csp6I	GTAC	7 cut(s)	783, 1202, 1244, 1266, 1689, 1809, 2032
CspAI	ACCGGT	1 cut(s)	603
CspCI	CAANNNNNGTGG	4 cut(s)	556, 591, 1896, 1931
CviAII	CATG	8 cut(s)	295, 652, 727, 1075, 1232, 1402, 1532, 2050
CviQI	GTAC	7 cut(s)	783, 1202, 1244, 1266, 1689, 1809, 2032
DdeI	CTNAG	9 cut(s)	72, 102, 903, 921, 1269, 1340, 1385, 1642, 1710
DinI	GGCGCC	1 cut(s)	1678
DpnI	GATC	6 cut(s)	336, 351, 611, 748, 1722, 1954
DpnII	GATC	6 cut(s)	334, 349, 609, 746, 1720, 1952
DrdI	GACNNNNNNGTC	1 cut(s)	767
DseDI	GACNNNNNNGTC	1 cut(s)	767
EaeI	YGGCCR	1 cut(s)	1819
Eco105I	TACGTA	1 cut(s)	2031
Eco130I	CCWWGG	4 cut(s)	514, 1032, 1108, 1550
Eco147I	AGGCCT	1 cut(s)	1096
Eco47I	GGWCC	2 cut(s)	703, 1228
Eco57I	CTGAAG	2 cut(s)	683, 1226
Eco91I	GGTNACC	1 cut(s)	560
EcoNI	CCTNNNNNAGG	1 cut(s)	906
EcoO109I	RGGNCCY	1 cut(s)	911
EcoO65I	GGTNACC	1 cut(s)	560
EcoRI	GAATTC	2 cut(s)	192, 713
EcoRII	CCWGG	4 cut(s)	448, 482, 1723, 1882
EcoT14I	CCWWGG	4 cut(s)	514, 1032, 1108, 1550
EgeI	GGCGCC	1 cut(s)	1678
EheI	GGCGCC	1 cut(s)	1678
ErhI	CCWWGG	4 cut(s)	514, 1032, 1108, 1550
Esp3I	CGTCTC	1 cut(s)	1611
FaeI	CATG	8 cut(s)	298, 655, 730, 1078, 1235, 1405, 1535, 2053
FalI	AAGNNNNNCTT	4 cut(s)	1389, 1421, 1430, 1462
FaqI	GGGAC	3 cut(s)	647, 716, 910
FatI	CATG	8 cut(s)	294, 651, 726, 1074, 1231, 1401, 1531, 2049
FauNDI	CATATG	2 cut(s)	428, 719
FblI	GTMKAC	1 cut(s)	1059
Fnu4HI	GCNGC	6 cut(s)	118, 206, 209, 724, 1120, 2039
FokI	GGATG	6 cut(s)	142, 185, 452, 607, 1513, 1959
Fsp4HI	GCNGC	6 cut(s)	118, 206, 209, 724, 1120, 2039
FspBI	CTAG	6 cut(s)	852, 1463, 1686, 1692, 1755, 2001
GlaI	GCGC	2 cut(s)	1118, 1678
GluI	GCNGC	6 cut(s)	118, 206, 209, 724, 1120, 2039
GsuI	CTGGAG	2 cut(s)	399, 505
HaeII	RGCGCY	1 cut(s)	1680
HaeIII	GGCC	7 cut(s)	893, 913, 1031, 1096, 1485, 1821, 1999
HapII	CCGG	3 cut(s)	82, 604, 1995
HhaI	GCGC	2 cut(s)	1119, 1679
Hin1I	GRCGYC	1 cut(s)	1677
Hin1II	CATG	8 cut(s)	298, 655, 730, 1078, 1235, 1405, 1535, 2053
Hin6I	GCGC	2 cut(s)	1117, 1677
HinP1I	GCGC	2 cut(s)	1117, 1677
HindIII	AAGCTT	1 cut(s)	665
HinfI	GANTC	4 cut(s)	76, 923, 1282, 1412
HpaII	CCGG	3 cut(s)	82, 604, 1995
HphI	GGTGA	5 cut(s)	524, 536, 1186, 1730, 1976
Hpy166II	GTNNAC	4 cut(s)	375, 1060, 1624, 1703
Hpy188I	TCNGA	8 cut(s)	75, 105, 182, 805, 922, 1272, 1287, 1711
Hpy188III	TCNNGA	8 cut(s)	61, 306, 326, 539, 683, 1021, 1358, 1950
Hpy8I	GTNNAC	4 cut(s)	375, 1060, 1624, 1703
Hpy99I	CGWCG	1 cut(s)	773
HpyAV	CCTTC	7 cut(s)	545, 936, 1086, 1357, 1515, 1757, 1986
HpyCH4III	ACNGT	5 cut(s)	391, 397, 769, 1276, 1947
HpyCH4IV	ACGT	5 cut(s)	153, 330, 1374, 1620, 2030
HpyF10VI	GCNNNNNNNGC	3 cut(s)	319, 1148, 1646
HpyF3I	CTNAG	9 cut(s)	72, 102, 903, 921, 1269, 1340, 1385, 1642, 1710
HpySE526I	ACGT	5 cut(s)	153, 330, 1374, 1620, 2030
Hsp92I	GRCGYC	1 cut(s)	1677
Hsp92II	CATG	8 cut(s)	298, 655, 730, 1078, 1235, 1405, 1535, 2053
HspAI	GCGC	2 cut(s)	1117, 1677
KasI	GGCGCC	1 cut(s)	1676
Kzo9I	GATC	6 cut(s)	334, 349, 609, 746, 1720, 1952
LmnI	GCTCC	2 cut(s)	223, 1114
Lsp1109I	GCAGC	5 cut(s)	129, 217, 220, 1131, 2050
LweI	GCATC	5 cut(s)	430, 1026, 1491, 1536, 1981
MaeI	CTAG	6 cut(s)	852, 1463, 1686, 1692, 1755, 2001
MaeII	ACGT	5 cut(s)	153, 330, 1374, 1620, 2030
MaeIII	GTNAC	7 cut(s)	342, 391, 418, 524, 560, 991, 1661
MalI	GATC	6 cut(s)	336, 351, 611, 748, 1722, 1954
MboI	GATC	6 cut(s)	334, 349, 609, 746, 1720, 1952
MboII	GAAGA	7 cut(s)	26, 83, 890, 1142, 1219, 1409, 1983
MflI	RGATCY	1 cut(s)	609
MhlI	GDGCHC	2 cut(s)	846, 1749
MlsI	TGGCCA	1 cut(s)	1821
MluNI	TGGCCA	1 cut(s)	1821
Mly113I	GGCGCC	1 cut(s)	1677
MlyI	GAGTC	2 cut(s)	85, 932
MmeI	TCCRAC	3 cut(s)	855, 1167, 1206
Mox20I	TGGCCA	1 cut(s)	1821
MscI	TGGCCA	1 cut(s)	1821
MslI	CAYNNNNRTG	1 cut(s)	537
Msp20I	TGGCCA	1 cut(s)	1821
MspA1I	CMGCKG	1 cut(s)	120
MspCI	CTTAAG	1 cut(s)	1406
MspI	CCGG	3 cut(s)	82, 604, 1995
MspR9I	CCNGG	5 cut(s)	450, 484, 1725, 1884, 1996
MvaI	CCWGG	4 cut(s)	450, 484, 1725, 1884
MvnI	CGCG	1 cut(s)	469
MwoI	GCNNNNNNNGC	3 cut(s)	319, 1148, 1646
NarI	GGCGCC	1 cut(s)	1677
NciI	CCSGG	1 cut(s)	1996
NdeI	CATATG	2 cut(s)	428, 719
NdeII	GATC	6 cut(s)	334, 349, 609, 746, 1720, 1952
NlaIII	CATG	8 cut(s)	298, 655, 730, 1078, 1235, 1405, 1535, 2053
NlaIV	GGNNCC	7 cut(s)	274, 357, 611, 681, 704, 1261, 1678
NmuCI	GTSAC	2 cut(s)	418, 524
NspI	RCATGY	1 cut(s)	1405
NspV	TTCGAA	3 cut(s)	235, 1001, 1941
OliI	CACNNNNGTG	1 cut(s)	537
PceI	AGGCCT	1 cut(s)	1096
PcsI	WCGNNNNNNNCGW	1 cut(s)	765
PfeI	GAWTC	2 cut(s)	1282, 1412
PflFI	GACNNNGTC	1 cut(s)	67
PfoI	TCCNGGA	2 cut(s)	482, 1723
PinAI	ACCGGT	1 cut(s)	603
PkrI	GCNGC	6 cut(s)	119, 207, 210, 725, 1121, 2040
PleI	GAGTC	2 cut(s)	84, 931
PluTI	GGCGCC	1 cut(s)	1680
PpsI	GAGTC	2 cut(s)	84, 931
Ppu21I	YACGTR	1 cut(s)	2031
PsiI	TTATAA	1 cut(s)	263
Psp1406I	AACGTT	1 cut(s)	153
Psp6I	CCWGG	4 cut(s)	448, 482, 1723, 1882
PspEI	GGTNACC	1 cut(s)	560
PspGI	CCWGG	4 cut(s)	448, 482, 1723, 1882
PspN4I	GGNNCC	7 cut(s)	274, 357, 611, 681, 704, 1261, 1678
PspPI	GGNCC	4 cut(s)	703, 911, 1228, 1997
PsrI	GAACNNNNNNTAC	2 cut(s)	641, 673
PstI	CTGCAG	2 cut(s)	207, 319
PsuI	RGATCY	1 cut(s)	609
PsyI	GACNNNGTC	1 cut(s)	67
RsaI	GTAC	7 cut(s)	784, 1203, 1245, 1267, 1690, 1810, 2033
RsaNI	GTAC	7 cut(s)	783, 1202, 1244, 1266, 1689, 1809, 2032
RseI	CAYNNNNRTG	1 cut(s)	537
SatI	GCNGC	6 cut(s)	118, 206, 209, 724, 1120, 2039
Sau3AI	GATC	6 cut(s)	334, 349, 609, 746, 1720, 1952
Sau96I	GGNCC	4 cut(s)	703, 911, 1228, 1997
ScaI	AGTACT	3 cut(s)	1203, 1267, 1690
SchI	GAGTC	2 cut(s)	85, 932
ScrFI	CCNGG	5 cut(s)	450, 484, 1725, 1884, 1996
SduI	GDGCHC	2 cut(s)	846, 1749
SfaNI	GCATC	5 cut(s)	430, 1026, 1491, 1536, 1981
SfcI	CTRYAG	2 cut(s)	203, 315
SfoI	GGCGCC	1 cut(s)	1678
SfuI	TTCGAA	3 cut(s)	235, 1001, 1941
SinI	GGWCC	2 cut(s)	703, 1228
SmiMI	CAYNNNNRTG	1 cut(s)	537
SmlI	CTYRAG	1 cut(s)	1406
SmoI	CTYRAG	1 cut(s)	1406
SnaBI	TACGTA	1 cut(s)	2031
SpeI	ACTAGT	1 cut(s)	1685
SseBI	AGGCCT	1 cut(s)	1096
SsiI	CCGC	4 cut(s)	120, 467, 565, 724
SspDI	GGCGCC	1 cut(s)	1676
SspI	AATATT	1 cut(s)	289
SspMI	CTAG	6 cut(s)	852, 1463, 1686, 1692, 1755, 2001
StuI	AGGCCT	1 cut(s)	1096
StyD4I	CCNGG	5 cut(s)	448, 482, 1723, 1882, 1994
StyI	CCWWGG	4 cut(s)	514, 1032, 1108, 1550
TaaI	ACNGT	5 cut(s)	391, 397, 769, 1276, 1947
TaiI	ACGT	5 cut(s)	156, 333, 1377, 1623, 2033
TaqI	TCGA	9 cut(s)	235, 691, 759, 771, 985, 1001, 1423, 1941, 1951
TatI	WGTACW	5 cut(s)	1201, 1243, 1265, 1688, 1808
TauI	GCSGC	1 cut(s)	726
TfiI	GAWTC	2 cut(s)	1282, 1412
TscAI	CASTG	5 cut(s)	982, 1476, 1531, 1678, 1702
TseFI	GTSAC	2 cut(s)	418, 524
TseI	GCWGC	5 cut(s)	117, 205, 208, 1119, 2038
Tsp45I	GTSAC	2 cut(s)	418, 524
TspGWI	ACGGA	2 cut(s)	1021, 1337
TspRI	CASTG	5 cut(s)	982, 1476, 1531, 1678, 1702
Tth111I	GACNNNGTC	1 cut(s)	67
Vha464I	CTTAAG	1 cut(s)	1406
VpaK11BI	GGWCC	2 cut(s)	703, 1228
XagI	CCTNNNNNAGG	1 cut(s)	906
XapI	RAATTY	4 cut(s)	192, 713, 788, 1909
XceI	RCATGY	1 cut(s)	1405
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1493
XmiI	GTMKAC	1 cut(s)	1059
XspI	CTAG	6 cut(s)	852, 1463, 1686, 1692, 1755, 2001
ZrmI	AGTACT	3 cut(s)	1203, 1267, 1690

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.