Rh7CG120200

AarF domain-containing protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7C
OG0005306
Physical Location & Seq
Reverse (-)
9169954 .. 9174572
4619 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7CG120200.1

Sequence Viewer

Length: 1089 bp
ATGCTGGAAACTGAGTTGGGTCGAAGTGTTGGCGAACTGTTTGAGAGATTCGATGTGGATCCTATTGGCTCTGCTTCGATTGCACAGGTTCACCGAGCAAGATTGAGAGGTGATAAGAGTGATATTGTTGTCAAGGTGCAACATCCTGGAGTTCAGGATCTAATGATGACAGATATCCGTAACTTGCAAGCCTTTGCTTTATACATTCAAAAGACAGATGTCAAATTTGATCTATACTCCGTAACCAAGGAAATGGAGACACAGATTGGTTATGAATTCGACTTCATGAGGGAAGCTAATGCTATGGAAAAAATTCGAAAGTTTTTGTATGAGAATAACAAAAAGACTCCTGTTGTGGTTCCTCGACTGATACGAGACCTAGTCACTAGGAGAGTCTTAGTTATGGAATATATTGATGGAATACCAATCCTGAATCTTGGTGATGAAATTGCGAAAAGGGGTATAAATCCTAGTGGTGAGGTTGCAGCCGCGGCAAAGCAGAAAATCCTCCAAAGTTTGACACTAGCATATGGACAAATGATTCTGAAGAATGGTTTCTTCCATGCAGATCCCCACCCAGGAAATATCCTAATCTGTAAAGGTTCAGAGGTTGCGTTGCTCGACTACGGCCAAGTGAAAGATCTCCCAGATGAGTTGAGACTTGGTTATGCAAATCTTGTTCTTGCAATAGCTGATGGTGACCCTGTAAGAGCCTTGGAGAGCTATAGGGAGCTTGGCATAGAAACCTTGAGCACATGTGAAAATGAACAGAAGGAAATGTTGAAGTTGGCTGAGACAATGTTTGACACGAAATTACCCCCTGGAGTGACGATGTTGCAGCCTTTTTCGGAGGAATCTTCTATTAAAAAGATTGCAGTTCAGGCTTTTCCAGAGGAGTTGTTTTCTGTACTTCGAACAGTGCATCTGCTGAGAGGGCTTAGTGTTGGACTGGGAATCAACTACTCATGTGCAGAACAATGGAGACCCATTGCAGAAGAAGCTCTGTTTCGTGCAGGGAGATTAAAAGGTAAAGATATCAAGGGTAGAAGTCGTAGAGGTGGTTTATTAAGGTTACTCTGGAGAAACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
ABC1

Protein Analysis

362

Amino Acids

40.77

Weight (kDa)

6.99

Isoelectric Point (pI)

34.99

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABC1 PF03109 2 - 239 4.5e-59 ABC1 atypical kinase-like domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 491
AciI CCGC 2 cut(s) 489, 491
AclWI GGATC 4 cut(s) 53, 66, 165, 563
AcoI YGGCCR 1 cut(s) 628
AcsI RAATTY 3 cut(s) 224, 275, 312
AcuI CTGAAG 1 cut(s) 566
AfaI GTAC 1 cut(s) 909
AfiI CCNNNNNNNGG 1 cut(s) 578
AflIII ACRYGT 1 cut(s) 755
AgsI TTSAA 2 cut(s) 209, 784
AjnI CCWGG 3 cut(s) 145, 577, 820
AluBI AGCT 5 cut(s) 296, 692, 723, 733, 1001
AluI AGCT 5 cut(s) 296, 692, 723, 733, 1001
Alw21I GWGCWC 1 cut(s) 755
Alw26I GTCTC 5 cut(s) 251, 369, 652, 788, 976
AlwI GGATC 4 cut(s) 53, 66, 165, 563
AoxI GGCC 1 cut(s) 628
ApeKI GCWGC 2 cut(s) 485, 838
ApoI RAATTY 3 cut(s) 224, 275, 312
Asp700I GAANNNNTTC 2 cut(s) 312, 554
AsuHPI GGTGA 5 cut(s) 83, 122, 452, 488, 710
AsuII TTCGAA 2 cut(s) 316, 913
BamHI GGATCC 1 cut(s) 58
Bbv12I GWGCWC 1 cut(s) 755
BbvI GCAGC 2 cut(s) 497, 850
BccI CCATC 2 cut(s) 410, 689
BceAI ACGGC 1 cut(s) 643
BciT130I CCWGG 3 cut(s) 147, 579, 822
BcoDI GTCTC 5 cut(s) 251, 369, 652, 788, 976
BfaI CTAG 4 cut(s) 380, 387, 471, 524
BfmI CTRYAG 1 cut(s) 724
BglII AGATCT 1 cut(s) 640
BisI GCNGC 4 cut(s) 486, 489, 492, 839
BlsI GCNGC 4 cut(s) 487, 490, 493, 840
Bme1390I CCNGG 3 cut(s) 147, 579, 822
BmiI GGNNCC 2 cut(s) 60, 360
BmrFI CCNGG 3 cut(s) 147, 579, 822
BmrI ACTGGG 1 cut(s) 959
BmsI GCATC 1 cut(s) 931
BmuI ACTGGG 1 cut(s) 959
BoxI GACNNNNGTC 1 cut(s) 218
BpmI CTGGAG 2 cut(s) 168, 843
Bpu14I TTCGAA 2 cut(s) 316, 913
BpuEI CTTGAG 1 cut(s) 769
BsaBI GATNNNNATC 1 cut(s) 57
BsaI GGTCTC 2 cut(s) 369, 976
BsaJI CCNNGG 5 cut(s) 246, 489, 577, 714, 820
Bsc4I CCNNNNNNNGG 1 cut(s) 578
Bse1I ACTGG 1 cut(s) 954
Bse3DI GCAATG 1 cut(s) 987
Bse8I GATNNNNATC 1 cut(s) 57
BseBI CCWGG 3 cut(s) 147, 579, 822
BseDI CCNNGG 5 cut(s) 246, 489, 577, 714, 820
BseGI GGATG 1 cut(s) 142
BseJI GATNNNNATC 1 cut(s) 57
BseLI CCNNNNNNNGG 1 cut(s) 578
BseMI GCAATG 1 cut(s) 987
BseMII CTCAG 2 cut(s) 783, 920
BseNI ACTGG 1 cut(s) 954
BseRI GAGGAG 1 cut(s) 908
BseXI GCAGC 2 cut(s) 497, 850
BsgI GTGCAG 2 cut(s) 990, 1032
Bsh1236I CGCG 1 cut(s) 491
BshFI GGCC 1 cut(s) 630
BsiHKAI GWGCWC 1 cut(s) 755
BslI CCNNNNNNNGG 1 cut(s) 578
BsmAI GTCTC 5 cut(s) 251, 369, 652, 788, 976
BsnI GGCC 1 cut(s) 630
Bso31I GGTCTC 2 cut(s) 369, 976
Bsp119I TTCGAA 2 cut(s) 316, 913
Bsp1286I GDGCHC 1 cut(s) 755
Bsp143I GATC 5 cut(s) 58, 157, 229, 568, 640
BspACI CCGC 2 cut(s) 489, 491
BspANI GGCC 1 cut(s) 630
BspCNI CTCAG 3 cut(s) 4, 784, 921
BspFNI CGCG 1 cut(s) 491
BspHI TCATGA 1 cut(s) 285
BspLI GGNNCC 2 cut(s) 60, 360
BspPI GGATC 4 cut(s) 53, 66, 165, 563
BspT104I TTCGAA 2 cut(s) 316, 913
BspTNI GGTCTC 2 cut(s) 369, 976
BsrDI GCAATG 1 cut(s) 987
BsrI ACTGG 1 cut(s) 954
BssECI CCNNGG 5 cut(s) 246, 489, 577, 714, 820
BssMI GATC 5 cut(s) 58, 157, 229, 568, 640
BssT1I CCWWGG 2 cut(s) 246, 714
Bst2UI CCWGG 3 cut(s) 147, 579, 822
Bst4CI ACNGT 2 cut(s) 39, 919
BstBI TTCGAA 2 cut(s) 316, 913
BstC8I GCNNGC 1 cut(s) 189
BstDEI CTNAG 5 cut(s) 12, 397, 792, 929, 938
BstDSI CCRYGG 1 cut(s) 489
BstEII GGTNACC 1 cut(s) 698
BstF5I GGATG 1 cut(s) 142
BstFNI CGCG 1 cut(s) 491
BstKTI GATC 5 cut(s) 61, 160, 232, 571, 643
BstMAI GTCTC 5 cut(s) 251, 369, 652, 788, 976
BstMBI GATC 5 cut(s) 58, 157, 229, 568, 640
BstMWI GCNNNNNNNGC 5 cut(s) 80, 491, 881, 934, 998
BstNI CCWGG 3 cut(s) 147, 579, 822
BstNSI RCATGY 1 cut(s) 759
BstPAI GACNNNNGTC 1 cut(s) 218
BstPI GGTNACC 1 cut(s) 698
BstSCI CCNGG 3 cut(s) 145, 577, 820
BstSFI CTRYAG 1 cut(s) 724
BstUI CGCG 1 cut(s) 491
BstV1I GCAGC 2 cut(s) 497, 850
BstX2I RGATCY 4 cut(s) 58, 157, 568, 640
BstXI CCANNNNNNTGG 1 cut(s) 253
BstYI RGATCY 4 cut(s) 58, 157, 568, 640
BsuRI GGCC 1 cut(s) 630
BtgI CCRYGG 1 cut(s) 489
BtsCI GGATG 1 cut(s) 142
BtsIMutI CAGTG 1 cut(s) 924
Cac8I GCNNGC 1 cut(s) 189
CciI TCATGA 1 cut(s) 285
Cfr42I CCGCGG 1 cut(s) 492
Csp6I GTAC 1 cut(s) 908
CviAII CATG 4 cut(s) 286, 563, 756, 966
CviQI GTAC 1 cut(s) 908
DdeI CTNAG 5 cut(s) 12, 397, 792, 929, 938
DpnI GATC 5 cut(s) 60, 159, 231, 570, 642
DpnII GATC 5 cut(s) 58, 157, 229, 568, 640
EaeI YGGCCR 1 cut(s) 628
Eco130I CCWWGG 2 cut(s) 246, 714
Eco31I GGTCTC 2 cut(s) 369, 976
Eco32I GATATC 2 cut(s) 175, 1036
Eco57I CTGAAG 1 cut(s) 566
Eco91I GGTNACC 1 cut(s) 698
EcoO65I GGTNACC 1 cut(s) 698
EcoRI GAATTC 1 cut(s) 275
EcoRII CCWGG 3 cut(s) 145, 577, 820
EcoRV GATATC 2 cut(s) 175, 1036
EcoT14I CCWWGG 2 cut(s) 246, 714
ErhI CCWWGG 2 cut(s) 246, 714
FaeI CATG 4 cut(s) 289, 566, 759, 969
FatI CATG 4 cut(s) 285, 562, 755, 965
FauNDI CATATG 1 cut(s) 529
Fnu4HI GCNGC 4 cut(s) 486, 489, 492, 839
FokI GGATG 1 cut(s) 129
Fsp4HI GCNGC 4 cut(s) 486, 489, 492, 839
FspBI CTAG 4 cut(s) 380, 387, 471, 524
GluI GCNGC 4 cut(s) 486, 489, 492, 839
GsuI CTGGAG 2 cut(s) 168, 843
HaeIII GGCC 1 cut(s) 630
Hin1II CATG 4 cut(s) 289, 566, 759, 969
HinfI GANTC 7 cut(s) 48, 346, 393, 433, 541, 854, 954
HphI GGTGA 5 cut(s) 83, 122, 452, 488, 710
Hpy166II GTNNAC 1 cut(s) 91
Hpy188I TCNGA 3 cut(s) 546, 607, 850
Hpy188III TCNNGA 5 cut(s) 155, 286, 430, 890, 1078
Hpy8I GTNNAC 1 cut(s) 91
HpyAV CCTTC 1 cut(s) 766
HpyCH4III ACNGT 2 cut(s) 39, 919
HpyF10VI GCNNNNNNNGC 5 cut(s) 80, 491, 881, 934, 998
HpyF3I CTNAG 5 cut(s) 12, 397, 792, 929, 938
Hsp92II CATG 4 cut(s) 289, 566, 759, 969
KspI CCGCGG 1 cut(s) 492
Kzo9I GATC 5 cut(s) 58, 157, 229, 568, 640
LmnI GCTCC 1 cut(s) 730
Lsp1109I GCAGC 2 cut(s) 497, 850
LweI GCATC 1 cut(s) 931
MaeI CTAG 4 cut(s) 380, 387, 471, 524
MaeIII GTNAC 6 cut(s) 179, 241, 382, 698, 826, 1071
MalI GATC 5 cut(s) 60, 159, 231, 570, 642
MboI GATC 5 cut(s) 58, 157, 229, 568, 640
MboII GAAGA 4 cut(s) 550, 559, 849, 1007
MflI RGATCY 4 cut(s) 58, 157, 568, 640
MhlI GDGCHC 1 cut(s) 755
MluCI AATT 5 cut(s) 224, 275, 312, 447, 812
MlyI GAGTC 2 cut(s) 340, 402
MmeI TCCRAC 1 cut(s) 925
MroXI GAANNNNTTC 2 cut(s) 312, 554
MseI TTAA 3 cut(s) 864, 1022, 1067
MspA1I CMGCKG 1 cut(s) 491
MspR9I CCNGG 3 cut(s) 147, 579, 822
MvaI CCWGG 3 cut(s) 147, 579, 822
MvnI CGCG 1 cut(s) 491
MwoI GCNNNNNNNGC 5 cut(s) 80, 491, 881, 934, 998
NdeI CATATG 1 cut(s) 529
NdeII GATC 5 cut(s) 58, 157, 229, 568, 640
NlaIII CATG 4 cut(s) 289, 566, 759, 969
NlaIV GGNNCC 2 cut(s) 60, 360
NmuCI GTSAC 3 cut(s) 382, 698, 826
NspI RCATGY 1 cut(s) 759
NspV TTCGAA 2 cut(s) 316, 913
PagI TCATGA 1 cut(s) 285
PciI ACATGT 1 cut(s) 755
PcsI WCGNNNNNNNCGW 1 cut(s) 370
PdmI GAANNNNTTC 2 cut(s) 312, 554
PfeI GAWTC 5 cut(s) 48, 433, 541, 854, 954
PflFI GACNNNGTC 1 cut(s) 380
PfoI TCCNGGA 1 cut(s) 145
PkrI GCNGC 4 cut(s) 487, 490, 493, 840
PleI GAGTC 2 cut(s) 340, 401
PpsI GAGTC 2 cut(s) 340, 401
PscI ACATGT 1 cut(s) 755
PshAI GACNNNNGTC 1 cut(s) 218
Psp6I CCWGG 3 cut(s) 145, 577, 820
PspEI GGTNACC 1 cut(s) 698
PspGI CCWGG 3 cut(s) 145, 577, 820
PspN4I GGNNCC 2 cut(s) 60, 360
PsuI RGATCY 4 cut(s) 58, 157, 568, 640
PsyI GACNNNGTC 1 cut(s) 380
RsaI GTAC 1 cut(s) 909
RsaNI GTAC 1 cut(s) 908
SacII CCGCGG 1 cut(s) 492
SaqAI TTAA 3 cut(s) 864, 1022, 1067
SatI GCNGC 4 cut(s) 486, 489, 492, 839
Sau3AI GATC 5 cut(s) 58, 157, 229, 568, 640
SchI GAGTC 2 cut(s) 340, 402
ScrFI CCNGG 3 cut(s) 147, 579, 822
SduI GDGCHC 1 cut(s) 755
SfaNI GCATC 1 cut(s) 931
SfcI CTRYAG 1 cut(s) 724
Sfr303I CCGCGG 1 cut(s) 492
SfuI TTCGAA 2 cut(s) 316, 913
SgrBI CCGCGG 1 cut(s) 492
SmlI CTYRAG 1 cut(s) 748
SmoI CTYRAG 1 cut(s) 748
Sse9I AATT 5 cut(s) 224, 275, 312, 447, 812
SsiI CCGC 2 cut(s) 489, 491
SspMI CTAG 4 cut(s) 380, 387, 471, 524
StyD4I CCNGG 3 cut(s) 145, 577, 820
StyI CCWWGG 2 cut(s) 246, 714
TaaI ACNGT 2 cut(s) 39, 919
TaqI TCGA 8 cut(s) 22, 51, 77, 279, 316, 364, 621, 913
TasI AATT 5 cut(s) 224, 275, 312, 447, 812
TatI WGTACW 1 cut(s) 907
TauI GCSGC 2 cut(s) 491, 494
TfiI GAWTC 5 cut(s) 48, 433, 541, 854, 954
Tru1I TTAA 3 cut(s) 864, 1022, 1067
Tru9I TTAA 3 cut(s) 864, 1022, 1067
TscAI CASTG 1 cut(s) 924
TseFI GTSAC 3 cut(s) 382, 698, 826
TseI GCWGC 2 cut(s) 485, 838
Tsp45I GTSAC 3 cut(s) 382, 698, 826
TspDTI ATGAA 4 cut(s) 274, 288, 459, 780
TspGWI ACGGA 2 cut(s) 167, 229
TspRI CASTG 1 cut(s) 924
Tth111I GACNNNGTC 1 cut(s) 380
XapI RAATTY 3 cut(s) 224, 275, 312
XceI RCATGY 1 cut(s) 759
XmnI GAANNNNTTC 2 cut(s) 312, 554
XspI CTAG 4 cut(s) 380, 387, 471, 524
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.