Rh7CG161700

Telomere length regulation protein TEL2 homolog

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7C
OG0011544
Physical Location & Seq
Reverse (-)
13334169 .. 13336546
2378 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7CG161700.1

Sequence Viewer

Length: 1050 bp
ATGGAGAATGGCTCCAAAAGACGAAGCAAAGGAGAAATCGGAGTTCTTGACAAGGTCGGAGAAGTGATCTCTGAATTAAACAAGTCCAAGCAAGCAGACCAAGCCATTTGCGTGCTTCACTCCATCGCTTTTCTTCTCTTCCCTCTCGATCCTTCTCTCTTCTTAGGTGCTATCGGCGAGCGGTGCAGGGAGAAGGTTCTTAGTGCTTTTTACCGAGGAGCTGCATTCAGATCATTTGCTCGGGTTTTGTTAACTGATGTCGCTTCCAATTGGCTTGCTTGTTTCCCGTTTTCAGCACGAAAACATGTGTATGATGTTTTCTTTGTTAATGGACTTGCCACCGAGGTTGTTCAGATTTTGGTCCCTTATCTACAGCAAAGTAGAAGTGGTGACCTTGATGTCAATAGAATTGGCGGCTCTTTCCAGTTTGAAGATTATACAAATGAAAATCTCAAGTCAACTGTATCTAGAGTGGGACAGATTGTTGCATCTATACCTTACAAAGCACAATTGAGAGCCCAACTTCACTTTCATCAAACATTTTTATTACTATCTTCATATTGTTTATTATTGACAAAGTACTATAGTTTGATTTTCAAGCAAGTTACCGTTCAGCTTCTTTCTCTAGCAGAAGAAGGGAATATGGAGATGTTAGATGAAGGAGCCTTCCGTAAAAGTGACATGCAAGGGACCTTACTGTTTGTTGGGGAAACATTTTCTCGTATATCTCGACTTGGATCTGTAGATGTGCTTTTAAGTGAAATAATCCCAAGGATTCTTAGACATGTCTGGTGTTTGTCATCGCCAACTATGGACTCACTAGGTTTAGATGTTCTGGAATCAGACCCGGGTTCCATTTTTTGGTTTAATCTTATTCAAGCAATCAAAGATTCATATGCTGTGGAAAGAATGTCTGAGCAACTTTTACATCAGCTTGCAACTGAACAAGTGGGTGATATTGAAGCTTACGGGGTTCTTTGGCTATTATTTCTTCCGGGTTTTTCAAATGCCAAATATCAGCGAGGTCCATGTTTACTGACAAGTTTTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko03460 ko04150 map03460 map04150
Pfam Domains
Protein Families
Telomere_reg-2

Protein Analysis

349

Amino Acids

39.2

Weight (kDa)

6.11

Isoelectric Point (pI)

39.03

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TELO2_ARM PF25320 249 - 338 5.3e-27 TELO2 ARM repeat domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 398
AccB7I CCANNNNNTGG 1 cut(s) 861
AccBSI CCGCTC 1 cut(s) 181
AciI CCGC 2 cut(s) 181, 414
AclWI GGATC 2 cut(s) 143, 745
AfaI GTAC 1 cut(s) 581
AfiI CCNNNNNNNGG 1 cut(s) 861
AflIII ACRYGT 2 cut(s) 304, 784
AgsI TTSAA 5 cut(s) 431, 598, 878, 962, 1005
AjuI GAANNNNNNNTTGG 2 cut(s) 513, 545
AluBI AGCT 4 cut(s) 221, 616, 934, 965
AluI AGCT 4 cut(s) 221, 616, 934, 965
AlwI GGATC 2 cut(s) 143, 745
Ama87I CYCGRG 2 cut(s) 240, 847
ApeKI GCWGC 1 cut(s) 221
AspS9I GGNCC 3 cut(s) 361, 690, 1025
AsuC2I CCSGG 3 cut(s) 848, 849, 996
AsuHPI GGTGA 2 cut(s) 401, 965
AvaI CYCGRG 2 cut(s) 240, 847
AvaII GGWCC 3 cut(s) 361, 690, 1025
BanII GRGCYC 1 cut(s) 520
BbvI GCAGC 1 cut(s) 208
BccI CCATC 1 cut(s) 131
BcnI CCSGG 3 cut(s) 848, 849, 996
BfaI CTAG 3 cut(s) 468, 626, 821
BfmI CTRYAG 3 cut(s) 371, 583, 741
BisI GCNGC 2 cut(s) 222, 415
BlsI GCNGC 2 cut(s) 223, 416
BmcAI AGTACT 1 cut(s) 581
Bme1390I CCNGG 3 cut(s) 848, 849, 996
Bme18I GGWCC 3 cut(s) 361, 690, 1025
BmeT110I CYCGRG 2 cut(s) 240, 847
BmgT120I GGNCC 3 cut(s) 361, 690, 1025
BmiI GGNNCC 5 cut(s) 13, 363, 664, 691, 853
BmrFI CCNGG 3 cut(s) 848, 849, 996
BmsI GCATC 1 cut(s) 497
BplI GAGNNNNNCTC 1 cut(s) 28
BpuEI CTTGAG 1 cut(s) 437
BpuMI CCSGG 3 cut(s) 848, 849, 996
BsaJI CCNNGG 4 cut(s) 214, 342, 770, 847
Bsc4I CCNNNNNNNGG 1 cut(s) 861
Bse1I ACTGG 1 cut(s) 424
BseDI CCNNGG 4 cut(s) 214, 342, 770, 847
BseLI CCNNNNNNNGG 1 cut(s) 861
BseMII CTCAG 1 cut(s) 906
BseNI ACTGG 1 cut(s) 424
BseRI GAGGAG 1 cut(s) 231
BseXI GCAGC 1 cut(s) 208
BsgI GTGCAG 1 cut(s) 205
BsiHKCI CYCGRG 2 cut(s) 240, 847
BsiSI CCGG 2 cut(s) 848, 995
BslFI GGGAC 3 cut(s) 347, 489, 703
BslI CCNNNNNNNGG 1 cut(s) 861
BsmFI GGGAC 3 cut(s) 347, 489, 703
BsmI GAATGC 1 cut(s) 224
BsoBI CYCGRG 2 cut(s) 240, 847
Bsp1286I GDGCHC 1 cut(s) 520
Bsp143I GATC 4 cut(s) 66, 148, 230, 737
BspACI CCGC 2 cut(s) 181, 414
BspCNI CTCAG 1 cut(s) 907
BspLI GGNNCC 5 cut(s) 13, 363, 664, 691, 853
BspPI GGATC 2 cut(s) 143, 745
BsrBI CCGCTC 1 cut(s) 181
BsrI ACTGG 1 cut(s) 424
BssECI CCNNGG 4 cut(s) 214, 342, 770, 847
BssMI GATC 4 cut(s) 66, 148, 230, 737
BssT1I CCWWGG 1 cut(s) 770
Bst4CI ACNGT 3 cut(s) 463, 610, 699
Bst6I CTCTTC 2 cut(s) 143, 164
BstC8I GCNNGC 5 cut(s) 93, 113, 179, 276, 936
BstDEI CTNAG 4 cut(s) 163, 200, 779, 915
BstEII GGTNACC 1 cut(s) 389
BstKTI GATC 4 cut(s) 69, 151, 233, 740
BstMBI GATC 4 cut(s) 66, 148, 230, 737
BstMWI GCNNNNNNNGC 2 cut(s) 101, 183
BstNSI RCATGY 3 cut(s) 308, 685, 788
BstPI GGTNACC 1 cut(s) 389
BstSCI CCNGG 3 cut(s) 846, 847, 994
BstSFI CTRYAG 3 cut(s) 371, 583, 741
BstV1I GCAGC 1 cut(s) 208
BstX2I RGATCY 1 cut(s) 737
BstYI RGATCY 1 cut(s) 737
BtgZI GCGATG 2 cut(s) 109, 786
Cac8I GCNNGC 5 cut(s) 93, 113, 179, 276, 936
Cfr13I GGNCC 3 cut(s) 361, 690, 1025
Cfr9I CCCGGG 1 cut(s) 847
Csp6I GTAC 1 cut(s) 580
CspCI CAANNNNNGTGG 2 cut(s) 328, 363
CviAII CATG 4 cut(s) 305, 682, 785, 1029
CviQI GTAC 1 cut(s) 580
DdeI CTNAG 4 cut(s) 163, 200, 779, 915
DpnI GATC 4 cut(s) 68, 150, 232, 739
DpnII GATC 4 cut(s) 66, 148, 230, 737
DrdI GACNNNNNNGTC 1 cut(s) 398
DseDI GACNNNNNNGTC 1 cut(s) 398
Eam1104I CTCTTC 2 cut(s) 143, 164
EarI CTCTTC 2 cut(s) 143, 164
Eco130I CCWWGG 1 cut(s) 770
Eco24I GRGCYC 1 cut(s) 520
Eco47I GGWCC 3 cut(s) 361, 690, 1025
Eco88I CYCGRG 2 cut(s) 240, 847
Eco91I GGTNACC 1 cut(s) 389
EcoO109I RGGNCCY 1 cut(s) 690
EcoO65I GGTNACC 1 cut(s) 389
EcoT14I CCWWGG 1 cut(s) 770
EcoT38I GRGCYC 1 cut(s) 520
ErhI CCWWGG 1 cut(s) 770
FaeI CATG 4 cut(s) 308, 685, 788, 1032
FaqI GGGAC 3 cut(s) 347, 489, 703
FatI CATG 4 cut(s) 304, 681, 784, 1028
FauNDI CATATG 1 cut(s) 895
Fnu4HI GCNGC 2 cut(s) 222, 415
FriOI GRGCYC 1 cut(s) 520
Fsp4HI GCNGC 2 cut(s) 222, 415
FspBI CTAG 3 cut(s) 468, 626, 821
GluI GCNGC 2 cut(s) 222, 415
HapII CCGG 2 cut(s) 848, 995
Hin1II CATG 4 cut(s) 308, 685, 788, 1032
HincII GTYRAC 2 cut(s) 252, 459
HindII GTYRAC 2 cut(s) 252, 459
HindIII AAGCTT 1 cut(s) 963
HinfI GANTC 4 cut(s) 775, 815, 839, 890
HpaI GTTAAC 1 cut(s) 252
HpaII CCGG 2 cut(s) 848, 995
HphI GGTGA 2 cut(s) 401, 965
Hpy166II GTNNAC 3 cut(s) 252, 459, 1034
Hpy188I TCNGA 7 cut(s) 41, 59, 73, 230, 354, 844, 916
Hpy188III TCNNGA 5 cut(s) 47, 146, 468, 729, 836
Hpy8I GTNNAC 3 cut(s) 252, 459, 1034
HpyAV CCTTC 5 cut(s) 162, 187, 629, 653, 676
HpyCH4III ACNGT 3 cut(s) 463, 610, 699
HpyCH4V TGCA 5 cut(s) 186, 224, 488, 685, 938
HpyF10VI GCNNNNNNNGC 2 cut(s) 101, 183
HpyF3I CTNAG 4 cut(s) 163, 200, 779, 915
Hsp92II CATG 4 cut(s) 308, 685, 788, 1032
KspAI GTTAAC 1 cut(s) 252
Kzo9I GATC 4 cut(s) 66, 148, 230, 737
LmnI GCTCC 3 cut(s) 17, 218, 662
LpnPI CCDG 6 cut(s) 172, 437, 775, 821, 861, 1008
Lsp1109I GCAGC 1 cut(s) 208
LweI GCATC 1 cut(s) 497
MaeI CTAG 3 cut(s) 468, 626, 821
MaeIII GTNAC 3 cut(s) 389, 604, 677
MalI GATC 4 cut(s) 68, 150, 232, 739
MbiI CCGCTC 1 cut(s) 181
MboI GATC 4 cut(s) 66, 148, 230, 737
MboII GAAGA 7 cut(s) 125, 130, 151, 443, 546, 644, 983
MfeI CAATTG 2 cut(s) 268, 509
MflI RGATCY 1 cut(s) 737
MhlI GDGCHC 1 cut(s) 520
MluCI AATT 4 cut(s) 74, 268, 408, 509
MlyI GAGTC 1 cut(s) 809
MmeI TCCRAC 1 cut(s) 37
MnlI CCTC 4 cut(s) 153, 209, 337, 1016
MseI TTAA 5 cut(s) 77, 251, 327, 755, 867
MslI CAYNNNNRTG 2 cut(s) 110, 309
MspI CCGG 2 cut(s) 848, 995
MspR9I CCNGG 3 cut(s) 848, 849, 996
MunI CAATTG 2 cut(s) 268, 509
Mva1269I GAATGC 1 cut(s) 224
MwoI GCNNNNNNNGC 2 cut(s) 101, 183
NciI CCSGG 3 cut(s) 848, 849, 996
NdeI CATATG 1 cut(s) 895
NdeII GATC 4 cut(s) 66, 148, 230, 737
NlaIII CATG 4 cut(s) 308, 685, 788, 1032
NlaIV GGNNCC 5 cut(s) 13, 363, 664, 691, 853
NmuCI GTSAC 2 cut(s) 389, 677
NspI RCATGY 3 cut(s) 308, 685, 788
PciI ACATGT 2 cut(s) 304, 784
PcsI WCGNNNNNNNCGW 1 cut(s) 727
PctI GAATGC 1 cut(s) 224
PfeI GAWTC 3 cut(s) 775, 839, 890
PflFI GACNNNGTC 1 cut(s) 53
PflMI CCANNNNNTGG 1 cut(s) 861
PkrI GCNGC 2 cut(s) 223, 416
PleI GAGTC 1 cut(s) 809
PpsI GAGTC 1 cut(s) 809
PpuMI RGGWCCY 1 cut(s) 690
PscI ACATGT 2 cut(s) 304, 784
Psp5II RGGWCCY 1 cut(s) 690
PspEI GGTNACC 1 cut(s) 389
PspN4I GGNNCC 5 cut(s) 13, 363, 664, 691, 853
PspPI GGNCC 3 cut(s) 361, 690, 1025
PspPPI RGGWCCY 1 cut(s) 690
PsuI RGATCY 1 cut(s) 737
PsyI GACNNNGTC 1 cut(s) 53
RsaI GTAC 1 cut(s) 581
RsaNI GTAC 1 cut(s) 580
RseI CAYNNNNRTG 2 cut(s) 110, 309
SaqAI TTAA 5 cut(s) 77, 251, 327, 755, 867
SatI GCNGC 2 cut(s) 222, 415
Sau3AI GATC 4 cut(s) 66, 148, 230, 737
Sau96I GGNCC 3 cut(s) 361, 690, 1025
ScaI AGTACT 1 cut(s) 581
SchI GAGTC 1 cut(s) 809
ScrFI CCNGG 3 cut(s) 848, 849, 996
SduI GDGCHC 1 cut(s) 520
SfaNI GCATC 1 cut(s) 497
SfcI CTRYAG 3 cut(s) 371, 583, 741
SinI GGWCC 3 cut(s) 361, 690, 1025
SmaI CCCGGG 1 cut(s) 849
SmiMI CAYNNNNRTG 2 cut(s) 110, 309
SmlI CTYRAG 1 cut(s) 452
SmoI CTYRAG 1 cut(s) 452
Sse9I AATT 4 cut(s) 74, 268, 408, 509
SsiI CCGC 2 cut(s) 181, 414
SspMI CTAG 3 cut(s) 468, 626, 821
StyD4I CCNGG 3 cut(s) 846, 847, 994
StyI CCWWGG 1 cut(s) 770
TaaI ACNGT 3 cut(s) 463, 610, 699
TaqI TCGA 2 cut(s) 147, 730
TasI AATT 4 cut(s) 74, 268, 408, 509
TatI WGTACW 1 cut(s) 579
TauI GCSGC 1 cut(s) 417
TfiI GAWTC 3 cut(s) 775, 839, 890
Tru1I TTAA 5 cut(s) 77, 251, 327, 755, 867
Tru9I TTAA 5 cut(s) 77, 251, 327, 755, 867
TseFI GTSAC 2 cut(s) 389, 677
TseI GCWGC 1 cut(s) 221
Tsp45I GTSAC 2 cut(s) 389, 677
TspDTI ATGAA 5 cut(s) 459, 521, 546, 672, 882
TspGWI ACGGA 1 cut(s) 659
TspMI CCCGGG 1 cut(s) 847
Tth111I GACNNNGTC 1 cut(s) 53
Van91I CCANNNNNTGG 1 cut(s) 861
VpaK11BI GGWCC 3 cut(s) 361, 690, 1025
XbaI TCTAGA 1 cut(s) 467
XceI RCATGY 3 cut(s) 308, 685, 788
XmaI CCCGGG 1 cut(s) 847
XspI CTAG 3 cut(s) 468, 626, 821
ZrmI AGTACT 1 cut(s) 581
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.