Diphthamide biosynthesis protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G62030 |
| fragaria_vesca | FvH4_5g30480 FvH4_5g30480 |
| malus_domestica | MD04G1037900.v1.1 |
| prunus_persica | Prupe.1G561000_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr7g0225101 RchiOBHm_Chr7g0225141 |
| rosa_laevigata | RLG00000001844 |
| rosa_multiflora | Rmu_co8105986.1_g000001 Rmu_sc0000307.1_g000014 Rmu_sc0000322.1_g000032 Rmu_sc0000322.1_g000039 |
| rosa_roxburghii | Rroxscaffold_3G00234210 |
| rosa_rugosa | Rorug07G0227600 Rorug07G0227700 |
| rosa_samantha | Rh7AG376200 Rh7BG362500 Rh7CG394900 Rh7DG372600 Rh7DG373000 |
| rosa_wichuraiana | Rw7G031440 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 386 |
| AclWI | GGATC | 1 cut(s) | 32 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 47, 135 |
| AgsI | TTSAA | 2 cut(s) | 292, 409 |
| AjnI | CCWGG | 2 cut(s) | 13, 328 |
| AluBI | AGCT | 1 cut(s) | 55 |
| AluI | AGCT | 1 cut(s) | 55 |
| Alw26I | GTCTC | 1 cut(s) | 296 |
| AlwI | GGATC | 1 cut(s) | 32 |
| AoxI | GGCC | 1 cut(s) | 126 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 296 |
| BceAI | ACGGC | 1 cut(s) | 92 |
| BciT130I | CCWGG | 2 cut(s) | 15, 330 |
| BclI | TGATCA | 1 cut(s) | 73 |
| BcoDI | GTCTC | 1 cut(s) | 296 |
| BfmI | CTRYAG | 1 cut(s) | 185 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 125 |
| Bme1390I | CCNGG | 2 cut(s) | 15, 330 |
| BmrFI | CCNGG | 2 cut(s) | 15, 330 |
| BmsI | GCATC | 1 cut(s) | 259 |
| BpmI | CTGGAG | 1 cut(s) | 83 |
| BsaJI | CCNNGG | 2 cut(s) | 14, 176 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 203, 233 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 47, 135 |
| Bse3DI | GCAATG | 1 cut(s) | 309 |
| BseBI | CCWGG | 2 cut(s) | 15, 330 |
| BseDI | CCNNGG | 2 cut(s) | 14, 176 |
| BseGI | GGATG | 2 cut(s) | 90, 274 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 47, 135 |
| BseMI | GCAATG | 1 cut(s) | 309 |
| BshFI | GGCC | 1 cut(s) | 128 |
| BslFI | GGGAC | 1 cut(s) | 166 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 47, 135 |
| BsmAI | GTCTC | 1 cut(s) | 296 |
| BsmFI | GGGAC | 1 cut(s) | 166 |
| BsnI | GGCC | 1 cut(s) | 128 |
| Bsp143I | GATC | 2 cut(s) | 37, 73 |
| BspACI | CCGC | 1 cut(s) | 386 |
| BspANI | GGCC | 1 cut(s) | 128 |
| BspPI | GGATC | 1 cut(s) | 32 |
| BsrDI | GCAATG | 1 cut(s) | 309 |
| BssECI | CCNNGG | 2 cut(s) | 14, 176 |
| BssMI | GATC | 2 cut(s) | 37, 73 |
| Bst2UI | CCWGG | 2 cut(s) | 15, 330 |
| Bst4CI | ACNGT | 1 cut(s) | 232 |
| BstF5I | GGATG | 2 cut(s) | 90, 274 |
| BstKTI | GATC | 2 cut(s) | 40, 76 |
| BstMAI | GTCTC | 1 cut(s) | 296 |
| BstMBI | GATC | 2 cut(s) | 37, 73 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 125 |
| BstNI | CCWGG | 2 cut(s) | 15, 330 |
| BstSCI | CCNGG | 2 cut(s) | 13, 328 |
| BstSFI | CTRYAG | 1 cut(s) | 185 |
| BsuRI | GGCC | 1 cut(s) | 128 |
| BtsCI | GGATG | 2 cut(s) | 90, 274 |
| CsiI | ACCWGGT | 1 cut(s) | 328 |
| CviJI | RGCY | 5 cut(s) | 55, 119, 128, 283, 321 |
| CviKI_1 | RGCY | 5 cut(s) | 55, 119, 128, 283, 321 |
| DpnI | GATC | 2 cut(s) | 39, 75 |
| DpnII | GATC | 2 cut(s) | 37, 73 |
| Eco147I | AGGCCT | 1 cut(s) | 128 |
| EcoRII | CCWGG | 2 cut(s) | 13, 328 |
| EcoT22I | ATGCAT | 1 cut(s) | 274 |
| FaiI | YATR | 4 cut(s) | 45, 72, 228, 326 |
| FaqI | GGGAC | 1 cut(s) | 166 |
| FbaI | TGATCA | 1 cut(s) | 73 |
| FokI | GGATG | 2 cut(s) | 97, 281 |
| GsuI | CTGGAG | 1 cut(s) | 83 |
| HaeIII | GGCC | 1 cut(s) | 128 |
| HinfI | GANTC | 6 cut(s) | 92, 172, 181, 292, 359, 382 |
| Hpy188I | TCNGA | 1 cut(s) | 177 |
| Hpy188III | TCNNGA | 3 cut(s) | 62, 96, 301 |
| HpyAV | CCTTC | 2 cut(s) | 156, 208 |
| HpyCH4III | ACNGT | 1 cut(s) | 232 |
| HpyCH4V | TGCA | 1 cut(s) | 272 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 125 |
| Ksp22I | TGATCA | 1 cut(s) | 73 |
| Kzo9I | GATC | 2 cut(s) | 37, 73 |
| LpnPI | CCDG | 4 cut(s) | 27, 47, 315, 342 |
| LweI | GCATC | 1 cut(s) | 259 |
| MabI | ACCWGGT | 1 cut(s) | 328 |
| MalI | GATC | 2 cut(s) | 39, 75 |
| MboI | GATC | 2 cut(s) | 37, 73 |
| MboII | GAAGA | 2 cut(s) | 211, 214 |
| MfeI | CAATTG | 2 cut(s) | 133, 255 |
| MluCI | AATT | 2 cut(s) | 133, 255 |
| MlyI | GAGTC | 1 cut(s) | 101 |
| MnlI | CCTC | 8 cut(s) | 58, 81, 118, 139, 171, 201, 255, 336 |
| Mph1103I | ATGCAT | 1 cut(s) | 274 |
| MroXI | GAANNNNTTC | 1 cut(s) | 296 |
| MseI | TTAA | 1 cut(s) | 21 |
| MspR9I | CCNGG | 2 cut(s) | 15, 330 |
| MunI | CAATTG | 2 cut(s) | 133, 255 |
| MvaI | CCWGG | 2 cut(s) | 15, 330 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 125 |
| NdeII | GATC | 2 cut(s) | 37, 73 |
| NsiI | ATGCAT | 1 cut(s) | 274 |
| PceI | AGGCCT | 1 cut(s) | 128 |
| PdmI | GAANNNNTTC | 1 cut(s) | 296 |
| PfeI | GAWTC | 5 cut(s) | 172, 181, 292, 359, 382 |
| PleI | GAGTC | 1 cut(s) | 100 |
| PpsI | GAGTC | 1 cut(s) | 100 |
| Psp6I | CCWGG | 2 cut(s) | 13, 328 |
| PspGI | CCWGG | 2 cut(s) | 13, 328 |
| SaqAI | TTAA | 1 cut(s) | 21 |
| Sau3AI | GATC | 2 cut(s) | 37, 73 |
| SchI | GAGTC | 1 cut(s) | 101 |
| ScrFI | CCNGG | 2 cut(s) | 15, 330 |
| SetI | ASST | 2 cut(s) | 57, 331 |
| SexAI | ACCWGGT | 1 cut(s) | 328 |
| SfaNI | GCATC | 1 cut(s) | 259 |
| SfcI | CTRYAG | 1 cut(s) | 185 |
| Sse9I | AATT | 2 cut(s) | 133, 255 |
| SseBI | AGGCCT | 1 cut(s) | 128 |
| SsiI | CCGC | 1 cut(s) | 386 |
| StuI | AGGCCT | 1 cut(s) | 128 |
| StyD4I | CCNGG | 2 cut(s) | 13, 328 |
| TaaI | ACNGT | 1 cut(s) | 232 |
| TaqI | TCGA | 2 cut(s) | 95, 300 |
| TasI | AATT | 2 cut(s) | 133, 255 |
| TfiI | GAWTC | 5 cut(s) | 172, 181, 292, 359, 382 |
| Tru1I | TTAA | 1 cut(s) | 21 |
| Tru9I | TTAA | 1 cut(s) | 21 |
| TspDTI | ATGAA | 1 cut(s) | 313 |
| XmnI | GAANNNNTTC | 1 cut(s) | 296 |
| Zsp2I | ATGCAT | 1 cut(s) | 274 |