Rw0G023130
ERF Family

Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Contig01076
OG0002818
Physical Location & Seq
Reverse (-)
17826 .. 24054
6229 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw0G023130.1

Sequence Viewer

Length: 1170 bp
CCTGCTTTGGGTGGGAATGCAAATACAGCTATAATATGCAATATCACCCTTGCCAGCAGTCTCCAATTTGCAAGTAGGGCATTACGTGTCACAAACTGTGCTCATGTCAATGAGATTTTGACTGATGCGGCTCTTCTAAAGCGTCAAAAGAAGGAAATTGAGGAGCTTCGAGCGAAATTGCAGGATACTCATTCAGAACATTGGACAGAGGAAATCCTCAATTTGCGGAACACATTGTTGCAGACTGAGTTAGAAAGGGAGCGTATAGCCTTGGAGTTGGAGGAGGAAAAGAAAGCCCAAGCTGAAAGAGAGAAGATGGTCCAACAACAAGCTAAGAAAATTGAAAATTTGAGTTCAATGGTTTTGTATTCAAATAGGGATGAGAATCGTGATCGCTTCAAGAAGCAGAAGAGGCGGGATACTTGGTGTCCAGGTAATCTTGCCAAGGAGGCCCTTGGAGAGGTGCTATCCACCATTATATCAAAGGCATCTGCTGTAAAACCACTAAGACCCAAGCGTGACGTGCAACTACTTCCTTTTGAAGAACTGGTGGATGAGACTGATGTTGCTCAGAACGAATCTTGCGAAGATGAAGAACATAAAAATAGCACAGTGGAGGACTGTGCTCTTCCTGATCCATGTGCTTTATTACATGTTACTAGCAGAAGAAAAGTGCCACCCAGGACTAAAAGCTTATCGCAGGATCATGAAGATTTGCTTATAGAATTTGAAAGTCAGAGAACGTGTAGTGAGATACAAATTGATTGCTTGACAAGGAGGCTTGCTGAGGCTGATATGTTTTCTGTTGAAATGTGCAATTACTACTCCACATCTTGTGCCTATAAGGGTACAATTGATGGGGATAAGAATGTTAGCTTAAGAGAGTCAGAAGCTATTCTTGTGATTAAGCGACTTCAAGAACAGATTAAGAGGTTAGAAATGGAGATGTCTTCAAGCCAGCAAAGTCTGGATTCTGTTGTTGAGCTGGCAAAAGAGCAAAACATATGTGCTATGGAACTCCATGAGGAACTTCTGATCGCACAAGAGGACTCCAGGGTTGCCCGTGGACAACATACTTGCAATGAGTCTGTAACGCAGGAAGATTACAAAAAGATGGAAGTTTACGCTGTTGAAAAGGACGCACAGATTATTTCTCTAAAAAAGAATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000070 GO:0000226 GO:0000278 GO:0000280 GO:0000775 GO:0000776 GO:0000779 GO:0000793 GO:0000819 GO:0001932 GO:0001934 GO:0002376 GO:0002478 GO:0002495 GO:0002504 GO:0003674 GO:0003774 GO:0003777 GO:0003824 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005694 GO:0005737 GO:0005819 GO:0005828 GO:0005829 GO:0005856 GO:0005871 GO:0005874 GO:0005875 GO:0005876 GO:0006810 GO:0006890 GO:0006928 GO:0006996 GO:0007010 GO:0007017 GO:0007018 GO:0007049 GO:0007051 GO:0007052 GO:0007059 GO:0007079 GO:0007080 GO:0007088 GO:0007346 GO:0008017 GO:0008092 GO:0008150 GO:0008608 GO:0009893 GO:0009987 GO:0010562 GO:0010564 GO:0010604 GO:0010965 GO:0015630 GO:0015631 GO:0016043 GO:0016192 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019220 GO:0019222 GO:0019882 GO:0019884 GO:0019886 GO:0022402 GO:0022607 GO:0030071 GO:0030496 GO:0031323 GO:0031325 GO:0031399 GO:0031401 GO:0031974 GO:0031981 GO:0032268 GO:0032270 GO:0032991 GO:0033043 GO:0033044 GO:0033045 GO:0033047 GO:0033674 GO:0034508 GO:0034622 GO:0042325 GO:0042327 GO:0043085 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043515 GO:0043549 GO:0043933 GO:0044085 GO:0044093 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044430 GO:0044444 GO:0044446 GO:0044464 GO:0044877 GO:0045859 GO:0045860 GO:0045937 GO:0048002 GO:0048193 GO:0048285 GO:0048518 GO:0048522 GO:0050000 GO:0050789 GO:0050790 GO:0050794 GO:0051128 GO:0051171 GO:0051173 GO:0051174 GO:0051179 GO:0051233 GO:0051234 GO:0051246 GO:0051247 GO:0051276 GO:0051303 GO:0051305 GO:0051310 GO:0051315 GO:0051338 GO:0051347 GO:0051382 GO:0051383 GO:0051640 GO:0051641 GO:0051649 GO:0051656 GO:0051726 GO:0051783 GO:0051983 GO:0060255 GO:0065003 GO:0065004 GO:0065007 GO:0065009 GO:0070013 GO:0070925 GO:0071824 GO:0071840 GO:0072686 GO:0080090 GO:0098687 GO:0098813 GO:0099080 GO:0099081 GO:0099512 GO:0099513 GO:0099606 GO:0099607 GO:0140014 GO:1901987 GO:1901990 GO:1902099 GO:1902850 GO:1903047 GO:1905818 GO:1990023
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Kinesin

Protein Analysis

389

Amino Acids

44.45

Weight (kDa)

5.23

Isoelectric Point (pI)

60.94

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 3 cut(s) 128, 226, 415
AclWI GGATC 2 cut(s) 629, 711
AcsI RAATTY 2 cut(s) 346, 725
AfaI GTAC 1 cut(s) 850
AfiI CCNNNNNNNGG 2 cut(s) 8, 460
AflII CTTAAG 1 cut(s) 877
AflIII ACRYGT 3 cut(s) 85, 652, 743
AjiI CACGTC 1 cut(s) 523
AjnI CCWGG 3 cut(s) 430, 680, 1052
AluBI AGCT 8 cut(s) 29, 166, 302, 332, 693, 876, 893, 985
AluI AGCT 8 cut(s) 29, 166, 302, 332, 693, 876, 893, 985
Alw21I GWGCWC 2 cut(s) 103, 628
Alw26I GTCTC 2 cut(s) 65, 551
AlwI GGATC 2 cut(s) 629, 711
AoxI GGCC 1 cut(s) 450
ApoI RAATTY 2 cut(s) 346, 725
Asp700I GAANNNNTTC 1 cut(s) 894
AspS9I GGNCC 2 cut(s) 319, 451
AsuHPI GGTGA 1 cut(s) 37
AvaII GGWCC 1 cut(s) 319
BbsI GAAGAC 1 cut(s) 942
Bbv12I GWGCWC 2 cut(s) 103, 628
BbvCI CCTCAGC 1 cut(s) 786
BccI CCATC 3 cut(s) 310, 851, 1108
BciT130I CCWGG 3 cut(s) 432, 682, 1054
BciVI GTATCC 2 cut(s) 178, 412
BcoDI GTCTC 2 cut(s) 65, 551
BfaI CTAG 1 cut(s) 660
BfrI CTTAAG 1 cut(s) 877
BfuI GTATCC 2 cut(s) 178, 412
BglI GCCNNNNNGGC 1 cut(s) 449
BisI GCNGC 1 cut(s) 129
BlsI GCNGC 1 cut(s) 130
Bme1390I CCNGG 3 cut(s) 432, 682, 1054
Bme18I GGWCC 1 cut(s) 319
BmgBI CACGTC 1 cut(s) 523
BmgT120I GGNCC 2 cut(s) 319, 451
BmrFI CCNGG 3 cut(s) 432, 682, 1054
BmsI GCATC 2 cut(s) 115, 497
BpiI GAAGAC 1 cut(s) 942
BpmI CTGGAG 1 cut(s) 1036
Bpu10I CCTNAGC 1 cut(s) 786
BsaAI YACGTR 1 cut(s) 86
BsaBI GATNNNNATC 1 cut(s) 384
BsaJI CCNNGG 6 cut(s) 270, 444, 454, 680, 1053, 1063
Bsc4I CCNNNNNNNGG 2 cut(s) 8, 460
Bse1I ACTGG 1 cut(s) 552
Bse3DI GCAATG 1 cut(s) 1087
Bse8I GATNNNNATC 1 cut(s) 384
BseBI CCWGG 3 cut(s) 432, 682, 1054
BseDI CCNNGG 6 cut(s) 270, 444, 454, 680, 1053, 1063
BseGI GGATG 2 cut(s) 385, 559
BseJI GATNNNNATC 1 cut(s) 384
BseLI CCNNNNNNNGG 2 cut(s) 8, 460
BseMI GCAATG 1 cut(s) 1087
BseMII CTCAG 3 cut(s) 237, 584, 777
BseNI ACTGG 1 cut(s) 552
BseRI GAGGAG 2 cut(s) 176, 296
BshFI GGCC 1 cut(s) 452
BsiHKAI GWGCWC 2 cut(s) 103, 628
BslI CCNNNNNNNGG 2 cut(s) 8, 460
BsmAI GTCTC 2 cut(s) 65, 551
BsmI GAATGC 1 cut(s) 22
BsnI GGCC 1 cut(s) 452
Bsp1286I GDGCHC 2 cut(s) 103, 628
Bsp143I GATC 4 cut(s) 391, 634, 703, 1035
BspACI CCGC 3 cut(s) 128, 226, 415
BspANI GGCC 1 cut(s) 452
BspCNI CTCAG 3 cut(s) 238, 583, 778
BspHI TCATGA 1 cut(s) 706
BspPI GGATC 2 cut(s) 629, 711
BspQI GCTCTTC 2 cut(s) 138, 633
BspTI CTTAAG 1 cut(s) 877
BsrDI GCAATG 1 cut(s) 1087
BsrI ACTGG 1 cut(s) 552
BssECI CCNNGG 6 cut(s) 270, 444, 454, 680, 1053, 1063
BssMI GATC 4 cut(s) 391, 634, 703, 1035
BssT1I CCWWGG 3 cut(s) 270, 444, 454
Bst2UI CCWGG 3 cut(s) 432, 682, 1054
Bst4CI ACNGT 3 cut(s) 98, 613, 623
Bst6I CTCTTC 3 cut(s) 138, 404, 633
BstAFI CTTAAG 1 cut(s) 877
BstBAI YACGTR 1 cut(s) 86
BstC8I GCNNGC 4 cut(s) 55, 783, 959, 987
BstDEI CTNAG 5 cut(s) 246, 333, 506, 570, 786
BstDSI CCRYGG 1 cut(s) 1063
BstENI CCTNNNNNAGG 1 cut(s) 458
BstF5I GGATG 2 cut(s) 385, 559
BstKTI GATC 4 cut(s) 394, 637, 706, 1038
BstMAI GTCTC 2 cut(s) 65, 551
BstMBI GATC 4 cut(s) 391, 634, 703, 1035
BstMWI GCNNNNNNNGC 5 cut(s) 26, 77, 412, 449, 523
BstNI CCWGG 3 cut(s) 432, 682, 1054
BstNSI RCATGY 1 cut(s) 656
BstSCI CCNGG 3 cut(s) 430, 680, 1052
BstV2I GAAGAC 1 cut(s) 942
BsuI GTATCC 2 cut(s) 178, 412
BsuRI GGCC 1 cut(s) 452
BtgI CCRYGG 1 cut(s) 1063
BtrI CACGTC 1 cut(s) 523
BtsCI GGATG 2 cut(s) 385, 559
BtsIMutI CAGTG 1 cut(s) 618
Cac8I GCNNGC 4 cut(s) 55, 783, 959, 987
CciI TCATGA 1 cut(s) 706
Cfr13I GGNCC 2 cut(s) 319, 451
CseI GACGC 2 cut(s) 131, 1148
Csp6I GTAC 1 cut(s) 849
CviAII CATG 5 cut(s) 104, 639, 653, 707, 1022
CviQI GTAC 1 cut(s) 849
DdeI CTNAG 5 cut(s) 246, 333, 506, 570, 786
DpnI GATC 4 cut(s) 393, 636, 705, 1037
DpnII GATC 4 cut(s) 391, 634, 703, 1035
Eam1104I CTCTTC 3 cut(s) 138, 404, 633
EarI CTCTTC 3 cut(s) 138, 404, 633
Eco130I CCWWGG 3 cut(s) 270, 444, 454
Eco47I GGWCC 1 cut(s) 319
EcoNI CCTNNNNNAGG 1 cut(s) 458
EcoO109I RGGNCCY 1 cut(s) 451
EcoRII CCWGG 3 cut(s) 430, 680, 1052
EcoT14I CCWWGG 3 cut(s) 270, 444, 454
ErhI CCWWGG 3 cut(s) 270, 444, 454
FaeI CATG 5 cut(s) 107, 642, 656, 710, 1025
FalI AAGNNNNNCTT 4 cut(s) 702, 734, 882, 914
FatI CATG 5 cut(s) 103, 638, 652, 706, 1021
FauI CCCGC 1 cut(s) 408
FauNDI CATATG 1 cut(s) 1004
Fnu4HI GCNGC 1 cut(s) 129
FokI GGATG 2 cut(s) 392, 566
Fsp4HI GCNGC 1 cut(s) 129
FspBI CTAG 1 cut(s) 660
GluI GCNGC 1 cut(s) 129
GsuI CTGGAG 1 cut(s) 1036
HaeIII GGCC 1 cut(s) 452
HgaI GACGC 2 cut(s) 131, 1148
Hin1II CATG 5 cut(s) 107, 642, 656, 710, 1025
HindIII AAGCTT 1 cut(s) 691
HinfI GANTC 6 cut(s) 385, 578, 884, 971, 1049, 1085
HphI GGTGA 1 cut(s) 37
Hpy166II GTNNAC 2 cut(s) 1067, 1123
Hpy188I TCNGA 5 cut(s) 196, 573, 738, 889, 1035
Hpy188III TCNNGA 6 cut(s) 389, 400, 632, 707, 917, 968
Hpy8I GTNNAC 2 cut(s) 1067, 1123
HpyAV CCTTC 1 cut(s) 145
HpyCH4III ACNGT 3 cut(s) 98, 613, 623
HpyCH4IV ACGT 3 cut(s) 85, 522, 743
HpyCH4V TGCA 8 cut(s) 20, 39, 71, 181, 241, 526, 816, 1080
HpyF10VI GCNNNNNNNGC 5 cut(s) 26, 77, 412, 449, 523
HpyF3I CTNAG 5 cut(s) 246, 333, 506, 570, 786
HpySE526I ACGT 3 cut(s) 85, 522, 743
Hsp92II CATG 5 cut(s) 107, 642, 656, 710, 1025
Kzo9I GATC 4 cut(s) 391, 634, 703, 1035
LguI GCTCTTC 2 cut(s) 138, 633
LmnI GCTCC 2 cut(s) 163, 259
LweI GCATC 2 cut(s) 115, 497
MaeI CTAG 1 cut(s) 660
MaeII ACGT 3 cut(s) 85, 522, 743
MaeIII GTNAC 4 cut(s) 88, 518, 655, 1090
MalI GATC 4 cut(s) 393, 636, 705, 1037
MboI GATC 4 cut(s) 391, 634, 703, 1035
MfeI CAATTG 1 cut(s) 852
MhlI GDGCHC 2 cut(s) 103, 628
MlyI GAGTC 3 cut(s) 893, 1043, 1094
MmeI TCCRAC 2 cut(s) 258, 346
MroXI GAANNNNTTC 1 cut(s) 894
MseI TTAA 3 cut(s) 878, 906, 927
MslI CAYNNNNRTG 1 cut(s) 108
MspCI CTTAAG 1 cut(s) 877
MspR9I CCNGG 3 cut(s) 432, 682, 1054
MunI CAATTG 1 cut(s) 852
Mva1269I GAATGC 1 cut(s) 22
MvaI CCWGG 3 cut(s) 432, 682, 1054
MwoI GCNNNNNNNGC 5 cut(s) 26, 77, 412, 449, 523
NdeI CATATG 1 cut(s) 1004
NdeII GATC 4 cut(s) 391, 634, 703, 1035
NlaIII CATG 5 cut(s) 107, 642, 656, 710, 1025
NmuCI GTSAC 2 cut(s) 88, 518
NspI RCATGY 1 cut(s) 656
PagI TCATGA 1 cut(s) 706
PciI ACATGT 1 cut(s) 652
PciSI GCTCTTC 2 cut(s) 138, 633
PcsI WCGNNNNNNNCGW 1 cut(s) 582
PctI GAATGC 1 cut(s) 22
PdmI GAANNNNTTC 1 cut(s) 894
PfeI GAWTC 3 cut(s) 385, 578, 971
PkrI GCNGC 1 cut(s) 130
PleI GAGTC 3 cut(s) 892, 1043, 1093
PpsI GAGTC 3 cut(s) 892, 1043, 1093
Ppu21I YACGTR 1 cut(s) 86
PscI ACATGT 1 cut(s) 652
Psp6I CCWGG 3 cut(s) 430, 680, 1052
PspGI CCWGG 3 cut(s) 430, 680, 1052
PspPI GGNCC 2 cut(s) 319, 451
RsaI GTAC 1 cut(s) 850
RsaNI GTAC 1 cut(s) 849
RseI CAYNNNNRTG 1 cut(s) 108
SapI GCTCTTC 2 cut(s) 138, 633
SaqAI TTAA 3 cut(s) 878, 906, 927
SatI GCNGC 1 cut(s) 129
Sau3AI GATC 4 cut(s) 391, 634, 703, 1035
Sau96I GGNCC 2 cut(s) 319, 451
SchI GAGTC 3 cut(s) 893, 1043, 1094
ScrFI CCNGG 3 cut(s) 432, 682, 1054
SduI GDGCHC 2 cut(s) 103, 628
SfaNI GCATC 2 cut(s) 115, 497
SinI GGWCC 1 cut(s) 319
SmiMI CAYNNNNRTG 1 cut(s) 108
SmlI CTYRAG 1 cut(s) 877
SmoI CTYRAG 1 cut(s) 877
SsiI CCGC 3 cut(s) 128, 226, 415
SspMI CTAG 1 cut(s) 660
StyD4I CCNGG 3 cut(s) 430, 680, 1052
StyI CCWWGG 3 cut(s) 270, 444, 454
TaaI ACNGT 3 cut(s) 98, 613, 623
TaiI ACGT 3 cut(s) 88, 525, 746
TaqI TCGA 1 cut(s) 169
TauI GCSGC 1 cut(s) 131
TfiI GAWTC 3 cut(s) 385, 578, 971
Tru1I TTAA 3 cut(s) 878, 906, 927
Tru9I TTAA 3 cut(s) 878, 906, 927
TscAI CASTG 1 cut(s) 618
TseFI GTSAC 2 cut(s) 88, 518
Tsp45I GTSAC 2 cut(s) 88, 518
TspDTI ATGAA 2 cut(s) 606, 723
TspRI CASTG 1 cut(s) 618
Vha464I CTTAAG 1 cut(s) 877
VpaK11BI GGWCC 1 cut(s) 319
XagI CCTNNNNNAGG 1 cut(s) 458
XapI RAATTY 2 cut(s) 346, 725
XceI RCATGY 1 cut(s) 656
XmnI GAANNNNTTC 1 cut(s) 894
XspI CTAG 1 cut(s) 660
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.