Rw0G023310

ATP synthase subunit alpha

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Contig01079
OG0009874
Physical Location & Seq
Forward (+)
186357 .. 187889
1533 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw0G023310.1

Sequence Viewer

Length: 1533 bp
ATGGAATTCTCTACAAGAGCTGCGGAACTAACGACTCTATTAGAAAGTAGAATTACCAACTTTTACACGAATTTTCAAGTGGATGAGATCGGTCGAGTGGTCTCAGTTGGAGATGGGATTGCACGTGTTTATGGATTGAACGAGATTCAAGCTGGGGAAATGGTTGAATTTGCCAGCGGTGTGAAAGGAATAGCGTTGAATCTTGAGAATGAGAATGTAGGGATTGTTGTCTTTGGTAGTGATACCGCTATTAAAGAAGGAGATCTTGTCAAGCGCACTGGATCTATTGTGGATGTTCCTGCGGGAAAGGCTCTGCTAGGGCGTGTGGTCGACGGGTTGGGAGTTCCTATTGATGGAAGAGGAGCTCTAAGCGATCACGAGCGAAGACGTGTCGAAGTGAAAGCCCCTGGCATTATTGAACGTAAATCTGTGCACGAGCCTATGCAAACAGGGTTAAAGGCGGTAGATAGCCTGGTTCCTATAGGCCGTGGTCAACGAGAACTTATAATAGGGGACCGACAAACTGGAAAAACGGCTATTGCTATCGATACCATATTAAACCAAAAGCAACTGAACTCAAGGGCCACCTCTGAGAGTGAGACATTGTATTGTGTCTATGTAGCAATTGGACAGAAACGCTCAACTGTGGCACAATTAGTTCAAATTCTTTCAGAAGGGAATGCTATGGAATATTCCATTCTTGTAGCAGCCACCGCTTCGGATCCGGCTCCTCTGCAATTTATGGCCCCATATTCTGGGTGTGCCATGGGGGAATATTTCCGCGATAATGGAATGCACGCATTAATAATCTATGATGATCTTAGTAAACAGGCGGTGGCATATCGACAAATGTCATTATTGTTACGCCGACCACCAGGCCGTGAGGCTTTCCCAGGCGATGTTTTCTATTTACATTCCCGTCTCTTAGAAAGAGCCGCTAAACGATCGGACCAGACAGGTGCAGGTAGCTTGACCGCCTTGCCCGTCATTGAAACACAAGCTGGAGACGTATCGGCCTATATTCCAACCAATGTGATCTCCATTACTGATGGACAAATCTGTTCGGAAACAGAGCTCTTTTATCGCGGAATTAGACCTGCTATTAACGTCGGCTTATCTGTCAGTCGCGTCGGGTCCGCCGCTCAGTTGAAAATTATGAAACAAGTCTGCGGTAGTTCAAAACTGGAATTGGCACAATATCGCGAAGTGGCCGCCTTTGCTCAATTTGGGTCAGACCTTGACGCTGCGACTCAGGCATTACTCAATAGAGGTGCAAGGCTTACAGAAGTACCGAAACAACCACAATATGCACCACTTCCAATTGAAAAACAAATTTTAGTCATTTATGCAGCTGTCAATGGATTCTGTGATCGAATGCCACTAGACAGAATCTCTCAATATGAGAGAGCCATTCCAAATAGTATAAAACCAGAATTACTACAATCCCTTTTAGAAAAGGGTGGGTTAACTAACGAAAGAAAGATGGAACCAGATGCATTCTTAAAAGAAAGCGCTTTGCCTTTCCAAAAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00190 ko01100 ko04714 ko05010 ko05012 ko05016 map00190 map01100 map04714 map05010 map05012 map05016
Pfam Domains
Protein Families
ATP-synt_ab ATP-synt_ab_C ATP-synt_ab_N

Protein Analysis

510

Amino Acids

55.42

Weight (kDa)

6.02

Isoelectric Point (pI)

35.74

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ATP-synt_ab_N PF02874 27 - 94 2.5e-20 ATP synthase alpha/beta family, beta-barrel domain
ATP-synt_ab PF00006 151 - 375 2.7e-78 ATP synthase alpha/beta family, nucleotide-binding domain
ATP-synt_ab_C PF00306 382 - 496 1.4e-37 ATP synthase alpha/beta chain, C terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 506
Acc36I ACCTGC 2 cut(s) 953, 1105
AccB7I CCANNNNNTGG 1 cut(s) 755
AccBSI CCGCTC 1 cut(s) 1142
AccI GTMKAC 1 cut(s) 330
AccII CGCG 4 cut(s) 783, 1086, 1128, 1203
AclWI GGATC 3 cut(s) 289, 716, 729
AcoI YGGCCR 1 cut(s) 1209
AcsI RAATTY 5 cut(s) 5, 70, 167, 663, 1332
AcvI CACGTG 1 cut(s) 125
AfaI GTAC 1 cut(s) 1290
AfeI AGCGCT 1 cut(s) 1513
AfiI CCNNNNNNNGG 2 cut(s) 353, 755
AflIII ACRYGT 2 cut(s) 124, 388
AjiI CACGTC 1 cut(s) 389
AjnI CCWGG 4 cut(s) 406, 471, 874, 892
AluBI AGCT 7 cut(s) 20, 152, 365, 969, 1001, 1075, 1352
AluI AGCT 7 cut(s) 20, 152, 365, 969, 1001, 1075, 1352
Alw21I GWGCWC 3 cut(s) 367, 435, 1077
Alw26I GTCTC 4 cut(s) 106, 593, 926, 999
Alw44I GTGCAC 1 cut(s) 431
AlwI GGATC 3 cut(s) 289, 716, 729
Aor51HI AGCGCT 1 cut(s) 1513
AoxI GGCC 6 cut(s) 484, 582, 744, 877, 1014, 1209
ApaLI GTGCAC 1 cut(s) 431
ApeKI GCWGC 4 cut(s) 20, 707, 1244, 1349
ApoI RAATTY 5 cut(s) 5, 70, 167, 663, 1332
AseI ATTAAT 1 cut(s) 803
AspLEI GCGC 2 cut(s) 276, 1514
AspS9I GGNCC 5 cut(s) 514, 582, 745, 949, 1134
AvaII GGWCC 3 cut(s) 514, 949, 1134
BaeGI GKGCMC 1 cut(s) 435
BaeI ACNNNNGTAYC 2 cut(s) 1272, 1305
BamHI GGATCC 1 cut(s) 721
BanII GRGCYC 2 cut(s) 367, 1077
BauI CACGAG 2 cut(s) 377, 434
BbrPI CACGTG 1 cut(s) 125
BbsI GAAGAC 1 cut(s) 391
Bbv12I GWGCWC 3 cut(s) 367, 435, 1077
BbvI GCAGC 4 cut(s) 7, 719, 1231, 1361
BccI CCATC 4 cut(s) 107, 347, 1043, 1477
BceAI ACGGC 3 cut(s) 471, 549, 864
BciT130I CCWGG 4 cut(s) 408, 473, 876, 894
BcoDI GTCTC 4 cut(s) 106, 593, 926, 999
BfaI CTAG 2 cut(s) 317, 1382
BfmI CTRYAG 1 cut(s) 480
BfoI RGCGCY 1 cut(s) 1515
BfuAI ACCTGC 2 cut(s) 953, 1105
BglII AGATCT 1 cut(s) 262
BisI GCNGC 7 cut(s) 21, 708, 936, 1140, 1212, 1245, 1350
BlsI GCNGC 7 cut(s) 22, 709, 937, 1141, 1213, 1246, 1351
Bme1390I CCNGG 4 cut(s) 408, 473, 876, 894
Bme18I GGWCC 3 cut(s) 514, 949, 1134
BmgBI CACGTC 1 cut(s) 389
BmgT120I GGNCC 5 cut(s) 514, 582, 745, 949, 1134
BmiI GGNNCC 7 cut(s) 477, 515, 723, 729, 747, 1135, 1488
BmrFI CCNGG 4 cut(s) 408, 473, 876, 894
BmsI GCATC 1 cut(s) 1483
BoxI GACNNNNGTC 1 cut(s) 850
BpiI GAAGAC 1 cut(s) 391
BpmI CTGGAG 1 cut(s) 1023
BpuEI CTTGAG 2 cut(s) 224, 562
Bsa29I ATCGAT 1 cut(s) 546
BsaAI YACGTR 1 cut(s) 125
BsaI GGTCTC 1 cut(s) 106
BsaJI CCNNGG 4 cut(s) 406, 487, 765, 892
BsaXI ACNNNNNCTCC 2 cut(s) 252, 282
Bsc4I CCNNNNNNNGG 2 cut(s) 353, 755
Bse1I ACTGG 3 cut(s) 283, 529, 1188
BseBI CCWGG 4 cut(s) 408, 473, 876, 894
BseCI ATCGAT 1 cut(s) 546
BseDI CCNNGG 4 cut(s) 406, 487, 765, 892
BseGI GGATG 2 cut(s) 88, 298
BseLI CCNNNNNNNGG 2 cut(s) 353, 755
BseMII CTCAG 4 cut(s) 117, 582, 1157, 1265
BseNI ACTGG 3 cut(s) 283, 529, 1188
BseRI GAGGAG 2 cut(s) 375, 720
BseSI GKGCMC 1 cut(s) 435
BseXI GCAGC 4 cut(s) 7, 719, 1231, 1361
BseYI CCCAGC 1 cut(s) 152
BsgI GTGCAG 1 cut(s) 981
Bsh1236I CGCG 4 cut(s) 783, 1086, 1128, 1203
Bsh1285I CGRYCG 2 cut(s) 94, 947
BshFI GGCC 6 cut(s) 486, 584, 746, 879, 1016, 1211
BshVI ATCGAT 1 cut(s) 546
BsiEI CGRYCG 2 cut(s) 94, 947
BsiHKAI GWGCWC 3 cut(s) 367, 435, 1077
BsiSI CCGG 1 cut(s) 725
BslFI GGGAC 1 cut(s) 527
BslI CCNNNNNNNGG 2 cut(s) 353, 755
BsmAI GTCTC 4 cut(s) 106, 593, 926, 999
BsmBI CGTCTC 2 cut(s) 926, 999
BsmFI GGGAC 1 cut(s) 527
BsmI GAATGC 4 cut(s) 685, 798, 1380, 1496
BsnI GGCC 6 cut(s) 486, 584, 746, 879, 1016, 1211
Bso31I GGTCTC 1 cut(s) 106
Bsp1286I GDGCHC 3 cut(s) 367, 435, 1077
Bsp143I GATC 9 cut(s) 87, 262, 281, 373, 721, 817, 944, 1035, 1369
Bsp19I CCATGG 1 cut(s) 765
Bsp68I TCGCGA 1 cut(s) 1203
BspANI GGCC 6 cut(s) 486, 584, 746, 879, 1016, 1211
BspCNI CTCAG 4 cut(s) 116, 583, 1156, 1264
BspDI ATCGAT 1 cut(s) 546
BspFNI CGCG 4 cut(s) 783, 1086, 1128, 1203
BspLI GGNNCC 7 cut(s) 477, 515, 723, 729, 747, 1135, 1488
BspMI ACCTGC 2 cut(s) 953, 1105
BspPI GGATC 3 cut(s) 289, 716, 729
BspTNI GGTCTC 1 cut(s) 106
BsrBI CCGCTC 1 cut(s) 1142
BsrI ACTGG 3 cut(s) 283, 529, 1188
BssECI CCNNGG 4 cut(s) 406, 487, 765, 892
BssMI GATC 9 cut(s) 87, 262, 281, 373, 721, 817, 944, 1035, 1369
BssSI CACGAG 2 cut(s) 377, 434
BssT1I CCWWGG 1 cut(s) 765
Bst2BI CACGAG 2 cut(s) 377, 434
Bst2UI CCWGG 4 cut(s) 408, 473, 876, 894
Bst4CI ACNGT 1 cut(s) 646
Bst6I CTCTTC 1 cut(s) 352
BstBAI YACGTR 1 cut(s) 125
BstC8I GCNNGC 2 cut(s) 175, 798
BstDEI CTNAG 7 cut(s) 103, 368, 591, 821, 925, 1143, 1251
BstDSI CCRYGG 2 cut(s) 487, 765
BstF5I GGATG 2 cut(s) 88, 298
BstFNI CGCG 4 cut(s) 783, 1086, 1128, 1203
BstH2I RGCGCY 1 cut(s) 1515
BstHHI GCGC 2 cut(s) 276, 1514
BstKTI GATC 9 cut(s) 90, 265, 284, 376, 724, 820, 947, 1038, 1372
BstMAI GTCTC 4 cut(s) 106, 593, 926, 999
BstMBI GATC 9 cut(s) 87, 262, 281, 373, 721, 817, 944, 1035, 1369
BstMCI CGRYCG 2 cut(s) 94, 947
BstMWI GCNNNNNNNGC 4 cut(s) 308, 713, 1217, 1253
BstNI CCWGG 4 cut(s) 408, 473, 876, 894
BstPAI GACNNNNGTC 1 cut(s) 850
BstSCI CCNGG 4 cut(s) 406, 471, 874, 892
BstSFI CTRYAG 1 cut(s) 480
BstSLI GKGCMC 1 cut(s) 435
BstUI CGCG 4 cut(s) 783, 1086, 1128, 1203
BstV1I GCAGC 4 cut(s) 7, 719, 1231, 1361
BstV2I GAAGAC 1 cut(s) 391
BstX2I RGATCY 3 cut(s) 262, 281, 721
BstYI RGATCY 3 cut(s) 262, 281, 721
Bsu15I ATCGAT 1 cut(s) 546
BsuRI GGCC 6 cut(s) 486, 584, 746, 879, 1016, 1211
BsuTUI ATCGAT 1 cut(s) 546
BtgI CCRYGG 2 cut(s) 487, 765
BtgZI GCGATG 1 cut(s) 912
BtrI CACGTC 1 cut(s) 389
BtsCI GGATG 2 cut(s) 88, 298
BtsIMutI CAGTG 1 cut(s) 276
BtuMI TCGCGA 1 cut(s) 1203
BveI ACCTGC 2 cut(s) 953, 1105
Cac8I GCNNGC 2 cut(s) 175, 798
CfoI GCGC 2 cut(s) 276, 1514
Cfr13I GGNCC 5 cut(s) 514, 582, 745, 949, 1134
ClaI ATCGAT 1 cut(s) 546
CseI GACGC 2 cut(s) 1117, 1250
Csp6I GTAC 1 cut(s) 1289
CviAII CATG 1 cut(s) 766
CviQI GTAC 1 cut(s) 1289
DdeI CTNAG 7 cut(s) 103, 368, 591, 821, 925, 1143, 1251
DpnI GATC 9 cut(s) 89, 264, 283, 375, 723, 819, 946, 1037, 1371
DpnII GATC 9 cut(s) 87, 262, 281, 373, 721, 817, 944, 1035, 1369
EaeI YGGCCR 1 cut(s) 1209
Eam1104I CTCTTC 1 cut(s) 352
EarI CTCTTC 1 cut(s) 352
EciI GGCGGA 1 cut(s) 1126
Ecl136II GAGCTC 2 cut(s) 365, 1075
Eco130I CCWWGG 1 cut(s) 765
Eco24I GRGCYC 2 cut(s) 367, 1077
Eco31I GGTCTC 1 cut(s) 106
Eco47I GGWCC 3 cut(s) 514, 949, 1134
Eco47III AGCGCT 1 cut(s) 1513
Eco53kI GAGCTC 2 cut(s) 365, 1075
Eco72I CACGTG 1 cut(s) 125
EcoICRI GAGCTC 2 cut(s) 365, 1075
EcoRI GAATTC 1 cut(s) 5
EcoRII CCWGG 4 cut(s) 406, 471, 874, 892
EcoT14I CCWWGG 1 cut(s) 765
EcoT22I ATGCAT 1 cut(s) 1498
EcoT38I GRGCYC 2 cut(s) 367, 1077
ErhI CCWWGG 1 cut(s) 765
Esp3I CGTCTC 2 cut(s) 926, 999
FaeI CATG 1 cut(s) 769
FalI AAGNNNNNCTT 2 cut(s) 249, 281
FaqI GGGAC 1 cut(s) 527
FatI CATG 1 cut(s) 765
FauI CCCGC 1 cut(s) 295
FblI GTMKAC 1 cut(s) 330
Fnu4HI GCNGC 7 cut(s) 21, 708, 936, 1140, 1212, 1245, 1350
FokI GGATG 2 cut(s) 95, 305
FriOI GRGCYC 2 cut(s) 367, 1077
Fsp4HI GCNGC 7 cut(s) 21, 708, 936, 1140, 1212, 1245, 1350
FspBI CTAG 2 cut(s) 317, 1382
GlaI GCGC 2 cut(s) 275, 1513
GluI GCNGC 7 cut(s) 21, 708, 936, 1140, 1212, 1245, 1350
GsaI CCCAGC 1 cut(s) 156
GsuI CTGGAG 1 cut(s) 1023
HaeII RGCGCY 1 cut(s) 1515
HaeIII GGCC 6 cut(s) 486, 584, 746, 879, 1016, 1211
HapII CCGG 1 cut(s) 725
HgaI GACGC 2 cut(s) 1117, 1250
HhaI GCGC 2 cut(s) 276, 1514
Hin1II CATG 1 cut(s) 769
Hin6I GCGC 2 cut(s) 274, 1512
HinP1I GCGC 2 cut(s) 274, 1512
HincII GTYRAC 3 cut(s) 331, 494, 1467
HindII GTYRAC 3 cut(s) 331, 494, 1467
HinfI GANTC 6 cut(s) 34, 145, 199, 1249, 1362, 1389
HpaI GTTAAC 1 cut(s) 1467
HpaII CCGG 1 cut(s) 725
Hpy166II GTNNAC 5 cut(s) 331, 433, 494, 827, 1467
Hpy188I TCNGA 6 cut(s) 592, 673, 721, 949, 1066, 1234
Hpy188III TCNNGA 3 cut(s) 203, 377, 1202
Hpy8I GTNNAC 5 cut(s) 331, 433, 494, 827, 1467
Hpy99I CGWCG 3 cut(s) 335, 1112, 1133
HpyAV CCTTC 2 cut(s) 251, 668
HpyCH4III ACNGT 1 cut(s) 646
HpyCH4IV ACGT 5 cut(s) 124, 388, 421, 1008, 1107
HpyF10VI GCNNNNNNNGC 4 cut(s) 308, 713, 1217, 1253
HpyF3I CTNAG 7 cut(s) 103, 368, 591, 821, 925, 1143, 1251
HpySE526I ACGT 5 cut(s) 124, 388, 421, 1008, 1107
Hsp92II CATG 1 cut(s) 769
HspAI GCGC 2 cut(s) 274, 1512
KspAI GTTAAC 1 cut(s) 1467
Kzo9I GATC 9 cut(s) 87, 262, 281, 373, 721, 817, 944, 1035, 1369
LmnI GCTCC 2 cut(s) 362, 733
Lsp1109I GCAGC 4 cut(s) 7, 719, 1231, 1361
LweI GCATC 1 cut(s) 1483
MaeI CTAG 2 cut(s) 317, 1382
MaeII ACGT 5 cut(s) 124, 388, 421, 1008, 1107
MaeIII GTNAC 1 cut(s) 861
MalI GATC 9 cut(s) 89, 264, 283, 375, 723, 819, 946, 1037, 1371
MbiI CCGCTC 1 cut(s) 1142
MboI GATC 9 cut(s) 87, 262, 281, 373, 721, 817, 944, 1035, 1369
MboII GAAGA 2 cut(s) 369, 396
MfeI CAATTG 2 cut(s) 624, 1320
MflI RGATCY 3 cut(s) 262, 281, 721
MhlI GDGCHC 3 cut(s) 367, 435, 1077
MlyI GAGTC 2 cut(s) 28, 1243
MmeI TCCRAC 2 cut(s) 88, 1049
MnlI CCTC 5 cut(s) 353, 598, 741, 877, 1262
Mph1103I ATGCAT 1 cut(s) 1498
MseI TTAA 7 cut(s) 252, 455, 557, 803, 1104, 1466, 1502
MspA1I CMGCKG 2 cut(s) 177, 1352
MspI CCGG 1 cut(s) 725
MspR9I CCNGG 4 cut(s) 408, 473, 876, 894
MunI CAATTG 2 cut(s) 624, 1320
Mva1269I GAATGC 4 cut(s) 685, 798, 1380, 1496
MvaI CCWGG 4 cut(s) 408, 473, 876, 894
MvnI CGCG 4 cut(s) 783, 1086, 1128, 1203
MwoI GCNNNNNNNGC 4 cut(s) 308, 713, 1217, 1253
NcoI CCATGG 1 cut(s) 765
NdeII GATC 9 cut(s) 87, 262, 281, 373, 721, 817, 944, 1035, 1369
NlaIII CATG 1 cut(s) 769
NlaIV GGNNCC 7 cut(s) 477, 515, 723, 729, 747, 1135, 1488
NruI TCGCGA 1 cut(s) 1203
NsiI ATGCAT 1 cut(s) 1498
PctI GAATGC 4 cut(s) 685, 798, 1380, 1496
PfeI GAWTC 4 cut(s) 145, 199, 1362, 1389
PflMI CCANNNNNTGG 1 cut(s) 755
PkrI GCNGC 7 cut(s) 22, 709, 937, 1141, 1213, 1246, 1351
Ple19I CGATCG 1 cut(s) 947
PleI GAGTC 2 cut(s) 28, 1243
PmaCI CACGTG 1 cut(s) 125
PmlI CACGTG 1 cut(s) 125
PpsI GAGTC 2 cut(s) 28, 1243
Ppu21I YACGTR 1 cut(s) 125
PshAI GACNNNNGTC 1 cut(s) 850
PshBI ATTAAT 1 cut(s) 803
PsiI TTATAA 1 cut(s) 506
Psp124BI GAGCTC 2 cut(s) 367, 1077
Psp6I CCWGG 4 cut(s) 406, 471, 874, 892
PspCI CACGTG 1 cut(s) 125
PspFI CCCAGC 1 cut(s) 152
PspGI CCWGG 4 cut(s) 406, 471, 874, 892
PspN4I GGNNCC 7 cut(s) 477, 515, 723, 729, 747, 1135, 1488
PspPI GGNCC 5 cut(s) 514, 582, 745, 949, 1134
PsuI RGATCY 3 cut(s) 262, 281, 721
PvuI CGATCG 1 cut(s) 947
PvuII CAGCTG 1 cut(s) 1352
RruI TCGCGA 1 cut(s) 1203
RsaI GTAC 1 cut(s) 1290
RsaNI GTAC 1 cut(s) 1289
SacI GAGCTC 2 cut(s) 367, 1077
SalI GTCGAC 1 cut(s) 329
SaqAI TTAA 7 cut(s) 252, 455, 557, 803, 1104, 1466, 1502
SatI GCNGC 7 cut(s) 21, 708, 936, 1140, 1212, 1245, 1350
Sau3AI GATC 9 cut(s) 87, 262, 281, 373, 721, 817, 944, 1035, 1369
Sau96I GGNCC 5 cut(s) 514, 582, 745, 949, 1134
SchI GAGTC 2 cut(s) 28, 1243
ScrFI CCNGG 4 cut(s) 408, 473, 876, 894
SduI GDGCHC 3 cut(s) 367, 435, 1077
SfaNI GCATC 1 cut(s) 1483
SfcI CTRYAG 1 cut(s) 480
SinI GGWCC 3 cut(s) 514, 949, 1134
SmlI CTYRAG 2 cut(s) 203, 577
SmoI CTYRAG 2 cut(s) 203, 577
SspI AATATT 2 cut(s) 692, 776
SspMI CTAG 2 cut(s) 317, 1382
SstI GAGCTC 2 cut(s) 367, 1077
StyD4I CCNGG 4 cut(s) 406, 471, 874, 892
StyI CCWWGG 1 cut(s) 765
TaaI ACNGT 1 cut(s) 646
TaiI ACGT 5 cut(s) 127, 391, 424, 1011, 1110
TaqI TCGA 6 cut(s) 94, 330, 393, 546, 844, 1372
TaqII GACCGA 2 cut(s) 80, 531
TauI GCSGC 3 cut(s) 938, 1142, 1214
TfiI GAWTC 4 cut(s) 145, 199, 1362, 1389
Tru1I TTAA 7 cut(s) 252, 455, 557, 803, 1104, 1466, 1502
Tru9I TTAA 7 cut(s) 252, 455, 557, 803, 1104, 1466, 1502
TscAI CASTG 1 cut(s) 283
TseI GCWGC 4 cut(s) 20, 707, 1244, 1349
TspDTI ATGAA 1 cut(s) 1172
TspRI CASTG 1 cut(s) 283
Van91I CCANNNNNTGG 1 cut(s) 755
VneI GTGCAC 1 cut(s) 431
VpaK11BI GGWCC 3 cut(s) 514, 949, 1134
VspI ATTAAT 1 cut(s) 803
XapI RAATTY 5 cut(s) 5, 70, 167, 663, 1332
XmiI GTMKAC 1 cut(s) 330
XspI CTAG 2 cut(s) 317, 1382
Zsp2I ATGCAT 1 cut(s) 1498
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.