Topless-related protein
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_6g29170 |
| rosa_chinensis | RchiOBHm_Chr4g0409071 |
| rosa_multiflora | Rmu_sc0004836.1_g000006 |
| rosa_rugosa | Rorug02G0304200 Rorug05G0382100 Rorug05G0582100 |
| rosa_samantha | Rh2DG044500 Rh4BG153400 Rh5CG359300 Rh6AG188900 Rh6AG189900 |
| rosa_wichuraiana | Rw1G012470 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcsI | RAATTY | 2 cut(s) | 137, 149 |
| AcvI | CACGTG | 1 cut(s) | 171 |
| AflIII | ACRYGT | 1 cut(s) | 168 |
| AgsI | TTSAA | 1 cut(s) | 188 |
| AluBI | AGCT | 1 cut(s) | 40 |
| AluI | AGCT | 1 cut(s) | 40 |
| AoxI | GGCC | 1 cut(s) | 67 |
| ApoI | RAATTY | 2 cut(s) | 137, 149 |
| BbrPI | CACGTG | 1 cut(s) | 171 |
| BclI | TGATCA | 1 cut(s) | 193 |
| BfaI | CTAG | 2 cut(s) | 71, 98 |
| BoxI | GACNNNNGTC | 1 cut(s) | 128 |
| BpmI | CTGGAG | 1 cut(s) | 140 |
| BsaAI | YACGTR | 1 cut(s) | 171 |
| Bse1I | ACTGG | 2 cut(s) | 70, 157 |
| Bse3DI | GCAATG | 1 cut(s) | 175 |
| BseGI | GGATG | 1 cut(s) | 28 |
| BseMI | GCAATG | 1 cut(s) | 175 |
| BseMII | CTCAG | 1 cut(s) | 134 |
| BseNI | ACTGG | 2 cut(s) | 70, 157 |
| BshFI | GGCC | 1 cut(s) | 69 |
| BsmI | GAATGC | 1 cut(s) | 74 |
| BsnI | GGCC | 1 cut(s) | 69 |
| Bsp143I | GATC | 1 cut(s) | 193 |
| BspANI | GGCC | 1 cut(s) | 69 |
| BspCNI | CTCAG | 1 cut(s) | 133 |
| BsrDI | GCAATG | 1 cut(s) | 175 |
| BsrI | ACTGG | 2 cut(s) | 70, 157 |
| BssMI | GATC | 1 cut(s) | 193 |
| BstBAI | YACGTR | 1 cut(s) | 171 |
| BstC8I | GCNNGC | 1 cut(s) | 38 |
| BstDEI | CTNAG | 1 cut(s) | 120 |
| BstF5I | GGATG | 1 cut(s) | 28 |
| BstKTI | GATC | 1 cut(s) | 196 |
| BstMBI | GATC | 1 cut(s) | 193 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 128 |
| BsuRI | GGCC | 1 cut(s) | 69 |
| BtsCI | GGATG | 1 cut(s) | 28 |
| Cac8I | GCNNGC | 1 cut(s) | 38 |
| CviAII | CATG | 1 cut(s) | 83 |
| CviJI | RGCY | 2 cut(s) | 40, 69 |
| CviKI_1 | RGCY | 2 cut(s) | 40, 69 |
| DdeI | CTNAG | 1 cut(s) | 120 |
| DpnI | GATC | 1 cut(s) | 195 |
| DpnII | GATC | 1 cut(s) | 193 |
| Eco72I | CACGTG | 1 cut(s) | 171 |
| FaeI | CATG | 1 cut(s) | 86 |
| FaiI | YATR | 4 cut(s) | 7, 9, 84, 202 |
| FatI | CATG | 1 cut(s) | 82 |
| FbaI | TGATCA | 1 cut(s) | 193 |
| FokI | GGATG | 1 cut(s) | 35 |
| FspBI | CTAG | 2 cut(s) | 71, 98 |
| GsuI | CTGGAG | 1 cut(s) | 140 |
| HaeIII | GGCC | 1 cut(s) | 69 |
| Hin1II | CATG | 1 cut(s) | 86 |
| HindIII | AAGCTT | 1 cut(s) | 38 |
| HinfI | GANTC | 1 cut(s) | 116 |
| Hpy166II | GTNNAC | 1 cut(s) | 49 |
| Hpy188I | TCNGA | 1 cut(s) | 123 |
| Hpy188III | TCNNGA | 3 cut(s) | 108, 133, 145 |
| Hpy8I | GTNNAC | 1 cut(s) | 49 |
| HpyCH4IV | ACGT | 1 cut(s) | 170 |
| HpyCH4V | TGCA | 1 cut(s) | 180 |
| HpyF3I | CTNAG | 1 cut(s) | 120 |
| HpySE526I | ACGT | 1 cut(s) | 170 |
| Hsp92II | CATG | 1 cut(s) | 86 |
| Ksp22I | TGATCA | 1 cut(s) | 193 |
| Kzo9I | GATC | 1 cut(s) | 193 |
| LmnI | GCTCC | 1 cut(s) | 110 |
| LpnPI | CCDG | 4 cut(s) | 51, 93, 158, 170 |
| MaeI | CTAG | 2 cut(s) | 71, 98 |
| MaeII | ACGT | 1 cut(s) | 170 |
| MaeIII | GTNAC | 1 cut(s) | 130 |
| MalI | GATC | 1 cut(s) | 195 |
| MboI | GATC | 1 cut(s) | 193 |
| MluCI | AATT | 3 cut(s) | 137, 149, 188 |
| MnlI | CCTC | 1 cut(s) | 19 |
| MseI | TTAA | 3 cut(s) | 30, 42, 89 |
| Mva1269I | GAATGC | 1 cut(s) | 74 |
| NdeII | GATC | 1 cut(s) | 193 |
| NlaIII | CATG | 1 cut(s) | 86 |
| NmuCI | GTSAC | 1 cut(s) | 130 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 131 |
| PctI | GAATGC | 1 cut(s) | 74 |
| PfeI | GAWTC | 1 cut(s) | 116 |
| PmaCI | CACGTG | 1 cut(s) | 171 |
| PmlI | CACGTG | 1 cut(s) | 171 |
| Ppu21I | YACGTR | 1 cut(s) | 171 |
| PshAI | GACNNNNGTC | 1 cut(s) | 128 |
| PspCI | CACGTG | 1 cut(s) | 171 |
| SaqAI | TTAA | 3 cut(s) | 30, 42, 89 |
| Sau3AI | GATC | 1 cut(s) | 193 |
| SetI | ASST | 3 cut(s) | 30, 42, 173 |
| Sse9I | AATT | 3 cut(s) | 137, 149, 188 |
| SspMI | CTAG | 2 cut(s) | 71, 98 |
| TaiI | ACGT | 1 cut(s) | 173 |
| TasI | AATT | 3 cut(s) | 137, 149, 188 |
| TfiI | GAWTC | 1 cut(s) | 116 |
| Tru1I | TTAA | 3 cut(s) | 30, 42, 89 |
| Tru9I | TTAA | 3 cut(s) | 30, 42, 89 |
| TseFI | GTSAC | 1 cut(s) | 130 |
| Tsp45I | GTSAC | 1 cut(s) | 130 |
| TspDTI | ATGAA | 2 cut(s) | 93, 152 |
| TspGWI | ACGGA | 1 cut(s) | 5 |
| XapI | RAATTY | 2 cut(s) | 137, 149 |
| XspI | CTAG | 2 cut(s) | 71, 98 |