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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr1g0362851 RchiOBHm_Chr2g0111371 |
| rosa_laevigata | RLG00000017890 RLG00000017892 |
| rosa_multiflora | Rmu_ssc0000075.1_g000005 Rmu_ssc0000075.1_g000007 |
| rosa_roxburghii | Rroxscaffold_2G00132440 Rroxscaffold_2G00132450 Rroxscaffold_4G00293440 Rroxscaffold_4G00293460 |
| rosa_rugosa | Rorug02G0173200 Rorug02G0173300 |
| rosa_samantha | Rh1BG276800 Rh1CG291100 Rh2AG226400 Rh2AG226500 Rh2BG238100 Rh2BG238200 Rh2CG229500 Rh2CG229600 Rh2DG233800 Rh2DG233900 |
| rosa_wichuraiana | Rw1G027550 Rw1G027780 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 2 cut(s) | 80, 87 |
| AclWI | GGATC | 1 cut(s) | 331 |
| AcyI | GRCGYC | 1 cut(s) | 81 |
| AjnI | CCWGG | 1 cut(s) | 83 |
| AluBI | AGCT | 2 cut(s) | 75, 281 |
| AluI | AGCT | 2 cut(s) | 75, 281 |
| Alw26I | GTCTC | 1 cut(s) | 225 |
| AlwI | GGATC | 1 cut(s) | 331 |
| AoxI | GGCC | 1 cut(s) | 7 |
| ApeKI | GCWGC | 1 cut(s) | 44 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 59, 91 |
| AspLEI | GCGC | 1 cut(s) | 83 |
| AsuHPI | GGTGA | 1 cut(s) | 381 |
| BanI | GGYRCC | 2 cut(s) | 80, 87 |
| BbvI | GCAGC | 1 cut(s) | 56 |
| BccI | CCATC | 5 cut(s) | 118, 250, 332, 388, 403 |
| BciT130I | CCWGG | 1 cut(s) | 85 |
| BcoDI | GTCTC | 1 cut(s) | 225 |
| BfoI | RGCGCY | 1 cut(s) | 84 |
| BisI | GCNGC | 1 cut(s) | 45 |
| BlsI | GCNGC | 1 cut(s) | 46 |
| Bme1390I | CCNGG | 1 cut(s) | 85 |
| BmiI | GGNNCC | 2 cut(s) | 82, 89 |
| BmrFI | CCNGG | 1 cut(s) | 85 |
| Bsa29I | ATCGAT | 1 cut(s) | 113 |
| BsaHI | GRCGYC | 1 cut(s) | 81 |
| BsaJI | CCNNGG | 1 cut(s) | 126 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 283, 313, 325, 355 |
| Bse3DI | GCAATG | 2 cut(s) | 134, 191 |
| BseBI | CCWGG | 1 cut(s) | 85 |
| BseCI | ATCGAT | 1 cut(s) | 113 |
| BseDI | CCNNGG | 1 cut(s) | 126 |
| BseGI | GGATG | 2 cut(s) | 324, 380 |
| BseMI | GCAATG | 2 cut(s) | 134, 191 |
| BseXI | GCAGC | 1 cut(s) | 56 |
| BshFI | GGCC | 1 cut(s) | 9 |
| BshNI | GGYRCC | 2 cut(s) | 80, 87 |
| BshVI | ATCGAT | 1 cut(s) | 113 |
| BsmAI | GTCTC | 1 cut(s) | 225 |
| BsmBI | CGTCTC | 1 cut(s) | 225 |
| BsnI | GGCC | 1 cut(s) | 9 |
| Bsp143I | GATC | 1 cut(s) | 336 |
| BspANI | GGCC | 1 cut(s) | 9 |
| BspDI | ATCGAT | 1 cut(s) | 113 |
| BspLI | GGNNCC | 2 cut(s) | 82, 89 |
| BspPI | GGATC | 1 cut(s) | 331 |
| BspT107I | GGYRCC | 2 cut(s) | 80, 87 |
| BsrDI | GCAATG | 2 cut(s) | 134, 191 |
| BssECI | CCNNGG | 1 cut(s) | 126 |
| BssMI | GATC | 1 cut(s) | 336 |
| BssNI | GRCGYC | 1 cut(s) | 81 |
| BssT1I | CCWWGG | 1 cut(s) | 126 |
| Bst2UI | CCWGG | 1 cut(s) | 85 |
| Bst4CI | ACNGT | 1 cut(s) | 376 |
| BstACI | GRCGYC | 1 cut(s) | 81 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 94 |
| BstC8I | GCNNGC | 1 cut(s) | 7 |
| BstDEI | CTNAG | 1 cut(s) | 285 |
| BstF5I | GGATG | 2 cut(s) | 324, 380 |
| BstH2I | RGCGCY | 1 cut(s) | 84 |
| BstHHI | GCGC | 1 cut(s) | 83 |
| BstKTI | GATC | 1 cut(s) | 339 |
| BstMAI | GTCTC | 1 cut(s) | 225 |
| BstMBI | GATC | 1 cut(s) | 336 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 94, 145, 184, 193 |
| BstNI | CCWGG | 1 cut(s) | 85 |
| BstSCI | CCNGG | 1 cut(s) | 83 |
| BstV1I | GCAGC | 1 cut(s) | 56 |
| Bsu15I | ATCGAT | 1 cut(s) | 113 |
| BsuRI | GGCC | 1 cut(s) | 9 |
| BsuTUI | ATCGAT | 1 cut(s) | 113 |
| BtsCI | GGATG | 2 cut(s) | 324, 380 |
| BtsI | GCAGTG | 3 cut(s) | 143, 155, 173 |
| BtsIMutI | CAGTG | 3 cut(s) | 143, 155, 173 |
| Cac8I | GCNNGC | 1 cut(s) | 7 |
| CfoI | GCGC | 1 cut(s) | 83 |
| ClaI | ATCGAT | 1 cut(s) | 113 |
| CviAII | CATG | 3 cut(s) | 13, 37, 70 |
| CviJI | RGCY | 3 cut(s) | 9, 75, 281 |
| CviKI_1 | RGCY | 3 cut(s) | 9, 75, 281 |
| DdeI | CTNAG | 1 cut(s) | 285 |
| DinI | GGCGCC | 1 cut(s) | 82 |
| DpnI | GATC | 1 cut(s) | 338 |
| DpnII | GATC | 1 cut(s) | 336 |
| Eco130I | CCWWGG | 1 cut(s) | 126 |
| Eco147I | AGGCCT | 1 cut(s) | 9 |
| EcoRII | CCWGG | 1 cut(s) | 83 |
| EcoT14I | CCWWGG | 1 cut(s) | 126 |
| EcoT22I | ATGCAT | 1 cut(s) | 18 |
| EgeI | GGCGCC | 1 cut(s) | 82 |
| EheI | GGCGCC | 1 cut(s) | 82 |
| ErhI | CCWWGG | 1 cut(s) | 126 |
| Esp3I | CGTCTC | 1 cut(s) | 225 |
| FaeI | CATG | 3 cut(s) | 16, 40, 73 |
| FaiI | YATR | 4 cut(s) | 14, 38, 71, 164 |
| FatI | CATG | 3 cut(s) | 12, 36, 69 |
| Fnu4HI | GCNGC | 1 cut(s) | 45 |
| FokI | GGATG | 2 cut(s) | 311, 367 |
| Fsp4HI | GCNGC | 1 cut(s) | 45 |
| GlaI | GCGC | 1 cut(s) | 82 |
| GluI | GCNGC | 1 cut(s) | 45 |
| HaeII | RGCGCY | 1 cut(s) | 84 |
| HaeIII | GGCC | 1 cut(s) | 9 |
| HhaI | GCGC | 1 cut(s) | 83 |
| Hin1I | GRCGYC | 1 cut(s) | 81 |
| Hin1II | CATG | 3 cut(s) | 16, 40, 73 |
| Hin6I | GCGC | 1 cut(s) | 81 |
| HinP1I | GCGC | 1 cut(s) | 81 |
| HinfI | GANTC | 2 cut(s) | 115, 121 |
| HphI | GGTGA | 1 cut(s) | 381 |
| Hpy166II | GTNNAC | 1 cut(s) | 291 |
| Hpy188I | TCNGA | 1 cut(s) | 120 |
| Hpy8I | GTNNAC | 1 cut(s) | 291 |
| HpyAV | CCTTC | 2 cut(s) | 159, 281 |
| HpyCH4III | ACNGT | 1 cut(s) | 376 |
| HpyCH4V | TGCA | 3 cut(s) | 16, 97, 134 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 94, 145, 184, 193 |
| HpyF3I | CTNAG | 1 cut(s) | 285 |
| Hsp92I | GRCGYC | 1 cut(s) | 81 |
| Hsp92II | CATG | 3 cut(s) | 16, 40, 73 |
| HspAI | GCGC | 1 cut(s) | 81 |
| KasI | GGCGCC | 1 cut(s) | 80 |
| Kzo9I | GATC | 1 cut(s) | 336 |
| LmnI | GCTCC | 1 cut(s) | 286 |
| LpnPI | CCDG | 3 cut(s) | 70, 97, 104 |
| Lsp1109I | GCAGC | 1 cut(s) | 56 |
| MalI | GATC | 1 cut(s) | 338 |
| MboI | GATC | 1 cut(s) | 336 |
| MluCI | AATT | 3 cut(s) | 105, 366, 400 |
| Mly113I | GGCGCC | 1 cut(s) | 81 |
| MmeI | TCCRAC | 4 cut(s) | 281, 332, 383, 395 |
| MnlI | CCTC | 6 cut(s) | 20, 150, 309, 351, 395, 402 |
| Mph1103I | ATGCAT | 1 cut(s) | 18 |
| MseI | TTAA | 1 cut(s) | 403 |
| MslI | CAYNNNNRTG | 1 cut(s) | 68 |
| MspR9I | CCNGG | 1 cut(s) | 85 |
| MvaI | CCWGG | 1 cut(s) | 85 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 94, 145, 184, 193 |
| NarI | GGCGCC | 1 cut(s) | 81 |
| NdeII | GATC | 1 cut(s) | 336 |
| NlaIII | CATG | 3 cut(s) | 16, 40, 73 |
| NlaIV | GGNNCC | 2 cut(s) | 82, 89 |
| NsiI | ATGCAT | 1 cut(s) | 18 |
| PceI | AGGCCT | 1 cut(s) | 9 |
| PfeI | GAWTC | 2 cut(s) | 115, 121 |
| PkrI | GCNGC | 1 cut(s) | 46 |
| PluTI | GGCGCC | 1 cut(s) | 84 |
| Psp6I | CCWGG | 1 cut(s) | 83 |
| PspGI | CCWGG | 1 cut(s) | 83 |
| PspN4I | GGNNCC | 2 cut(s) | 82, 89 |
| RseI | CAYNNNNRTG | 1 cut(s) | 68 |
| SaqAI | TTAA | 1 cut(s) | 403 |
| SatI | GCNGC | 1 cut(s) | 45 |
| Sau3AI | GATC | 1 cut(s) | 336 |
| ScrFI | CCNGG | 1 cut(s) | 85 |
| SetI | ASST | 7 cut(s) | 77, 93, 273, 283, 301, 356, 394 |
| SfoI | GGCGCC | 1 cut(s) | 82 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 68 |
| Sse9I | AATT | 3 cut(s) | 105, 366, 400 |
| SseBI | AGGCCT | 1 cut(s) | 9 |
| SspDI | GGCGCC | 1 cut(s) | 80 |
| StuI | AGGCCT | 1 cut(s) | 9 |
| StyD4I | CCNGG | 1 cut(s) | 83 |
| StyI | CCWWGG | 1 cut(s) | 126 |
| TaaI | ACNGT | 1 cut(s) | 376 |
| TaqI | TCGA | 2 cut(s) | 113, 398 |
| TasI | AATT | 3 cut(s) | 105, 366, 400 |
| TfiI | GAWTC | 2 cut(s) | 115, 121 |
| Tru1I | TTAA | 1 cut(s) | 403 |
| Tru9I | TTAA | 1 cut(s) | 403 |
| TscAI | CASTG | 3 cut(s) | 150, 162, 180 |
| TseI | GCWGC | 1 cut(s) | 44 |
| TspRI | CASTG | 3 cut(s) | 150, 162, 180 |
| Zsp2I | ATGCAT | 1 cut(s) | 18 |