Rorug02G0173300

RNA-binding protein 12-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
OG0000194
Physical Location & Seq
Forward (+)
15771599 .. 15776582
4984 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0173300.1

Sequence Viewer

Length: 1506 bp
ATGTGGCTTTTGTTGTCTCTCTTCTTTCTTTTCTTAGGCTCAGAGTCAGAGACATCTCCGTCGGTTTCTTCAGAAGAATCTAATATAATGGGTCGGAATACTAGAAAAGGAACCCCCCAACGAGCGGAGAAGAAGGAGAATAAACCTAAGACGCCGCCGTCCAAGGAGGAGGGTAATCAGAAGAAGACAAACAAGTCGAACGAGAAGGAAGTAGAGCATTCGTTGCCCATGAAGGAGCTTTCCAATACCCAGGTTAACAAAATGCTTGAGCAAGCTGCATTGGGTCATTCGGTGAAGTCCACTCCCTTAAGTAATACGCAATATGATTTTCCGATTGATGGCTCACCCTCACGTGGTCAAGCAAAGTCATCTGCAATCATTCGAGCACAGGAAGTCCGATCAAAACTAGAACCTCTATTCCCTAGCTTCGTGAAATCGCTCCTCCGATCTCATGTAGCTAGTTGTTTTTGGATGGGGCTTCCTTCGCTGTTTTGCAAATCACACTTACCAGAAAAAGATATTACAATGACTCTGGAAGATGAAGGTGGAAGACAGTTTCAATCTAAGTACATTGCATGCAAAACTGGACTGAGTGCTGGTTGGAGACAGTTTGCTGCTTCACATAAATTGTTGGAGGGAGATGTTTTGGTCTTCCAATTAGTTGAACCTGCCAAATTTAAGGTTTACGTAATAAGGTCAAATGATTTTACTGAAGTTGATGGGGCTCTTGGGCTTCTAAGTTTGGATGCTCAAACAAAACATAATGATGCAGATAAAGATAATGCAGAAACAGGTGCAGTGGCTTGTAATGAGTCTAACAGGAAACGCACAAAGTCTCCTCCTGATGTTGTTCAAAAGAAGAAAAAGATCAACTTGCCAGTTGAACACTCTGAAATCGATAGTGAGGAAGTTGATTCAGAAGTTGTGGAAAGCTCCAGGTTACCTGGGACAACTCTTCAATTTGAGGACATCAAAAGTTTTGAGAACTTCAACATTCTTGTAAATGGATTGCTTGTAGATTCTGAGTTCCCCGAAGATATACGAAGGAAGTACTACAAGCTCTGCCGCAGTCAGAATGCATTTCTTCATGAAAATGTTATGAAGGGAACATATTATAAATTGATTGTAGGAGCTATATTTGAAACTGTACATATTGTCGACGCCATTAAAGCTTGCCAGATTACCACGACTCAAGATGATTTTGTGTGTTGGGACAAATACTTGAGGGCCTTTGAGTTGTTGGGCATGAATGTTGGATTTATACGTGTGCGGTTATGCCGGCTTGCAAACCTTGCCTTTGACTCAGAAGATGCTATGGATGCGAAGACATATAAAGAAGCTAGAAAAGAACGAGCTCGAGCAGGACTAGGACTAAGAAGTATCGAGACAAAGATTCAGGAGTTGAGGGAGGCATGCCACGAATTTAGTAGTGCTATCGAGAGTCTGAGGTCCAGAGCTGAAGTCTACAATCAAAGGTTCCAGGAAGAGGTTACTGCTCCTTGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

501

Amino Acids

56.63

Weight (kDa)

6.82

Isoelectric Point (pI)

53.62

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B3 PF02362 143 - 233 1.6e-17 B3 DNA binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000194)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G34320 AT4G29090 AT5G42965
fragaria_vesca FvH4_1g19471 FvH4_1g29471 FvH4_1g29601 FvH4_2g04611 FvH4_2g05763 FvH4_2g11451 FvH4_2g11841 FvH4_3g10391 FvH4_3g21491 FvH4_3g21492 FvH4_3g32111 FvH4_3g35051 FvH4_4g06793 FvH4_5g08844 FvH4_5g15942 FvH4_5g18751 FvH4_5g27367 FvH4_6g11612 FvH4_6g20242 FvH4_6g27671 FvH4_6g31921 FvH4_7g32463
malus_domestica MD06G1107000.v1.1 MD07G1135800.v1.1 MD08G1205700.v1.1
prunus_persica Prupe.1G202000_v2.0.a1 Prupe.2G049100_v2.0.a1 Prupe.2G060500_v2.0.a1 Prupe.3G120300_v2.0.a1 Prupe.3G135000_v2.0.a1 Prupe.6G087800_v2.0.a1 Prupe.6G158500_v2.0.a1 Prupe.6G353900_v2.0.a1 Prupe.7G008600_v2.0.a1 Prupe.8G090500_v2.0.a1
pyrus_communis pycom01g21690 pycom02g19910 pycom04g18080 pycom07g08600 pycom07g18710 pycom07g26560 pycom08g03130 pycom08g13950 pycom09g06380 pycom10g13390 pycom10g22280 pycom11g04440 pycom11g10940 pycom12g04710 pycom13g08790 pycom15g31740 pycom17g14740 pycom17g24980
rosa_chinensis RchiOBHm_Chr1g0327801 RchiOBHm_Chr1g0347181 RchiOBHm_Chr1g0348821 RchiOBHm_Chr2g0157831 RchiOBHm_Chr5g0040851 RchiOBHm_Chr6g0249781 RchiOBHm_Chr7g0208461 RchiOBHm_Chr7g0210911 RchiOBHm_Chr7g0219141
rosa_laevigata RLG00000034326
rosa_multiflora Rmu_co8140276.1_g000001 Rmu_co8282095.1_g000001 Rmu_co8303311.1_g000001 Rmu_co8314215.1_g000001 Rmu_co8345435.1_g000001 Rmu_co8461745.1_g000001 Rmu_sc0000315.1_g000040 Rmu_sc0000487.1_g000014 Rmu_sc0000690.1_g000002 Rmu_sc0000808.1_g000001 Rmu_sc0000938.1_g000009 Rmu_sc0001260.1_g000002 Rmu_sc0001534.1_g000008 Rmu_sc0001669.1_g000003 Rmu_sc0001685.1_g000050 Rmu_sc0001838.1_g000007 Rmu_sc0002193.1_g000025 Rmu_sc0002308.1_g000058 Rmu_sc0002322.1_g000018 Rmu_sc0002529.1_g000008 Rmu_sc0002531.1_g000043 Rmu_sc0002754.1_g000022 Rmu_sc0002902.1_g000055 Rmu_sc0003627.1_g000005 Rmu_sc0003743.1_g000003 Rmu_sc0003765.1_g000016 Rmu_sc0003941.1_g000020 Rmu_sc0004038.1_g000011 Rmu_sc0004329.1_g000010 Rmu_sc0004476.1_g000002 Rmu_sc0004904.1_g000022 Rmu_sc0004988.1_g000017 Rmu_sc0005217.1_g000006 Rmu_sc0005257.1_g000010 Rmu_sc0005285.1_g000008 Rmu_sc0005687.1_g000001 Rmu_sc0006380.1_g000020 Rmu_sc0006922.1_g000004 Rmu_sc0007398.1_g000007 Rmu_sc0008279.1_g000019 Rmu_sc0009139.1_g000004 Rmu_sc0009158.1_g000001 Rmu_sc0010099.1_g000002 Rmu_sc0019043.1_g000001 Rmu_sc0022037.1_g000001 Rmu_sc0023291.1_g000001 Rmu_sc0031928.1_g000001 Rmu_sc0034436.1_g000002 Rmu_ssc0000126.1_g000001 Rmu_ssc0000151.1_g000016 Rmu_ssc0000152.1_g000009 Rmu_ssc0000395.1_g000031
rosa_roxburghii Rroxscaffold_1G00056570 Rroxscaffold_1G00058460 Rroxscaffold_2G00106120 Rroxscaffold_2G00106260 Rroxscaffold_6G00399080
rosa_rugosa Rorug02G0173300 Rorug02G0225600 Rorug03G0083300 Rorug03G0104900 Rorug04G0256500 Rorug05G0342600 Rorug06G0006200 Rorug06G0095200 Rorug06G0095600 Rorug06G0111500 Rorug07G0001200 Rorug07G0183100 Rorug07G0183100 Rorug07G0209000
rosa_samantha Rh2DG065400 Rh3DG315900 Rh4AG106100 Rh4BG362100 Rh4CG030200 Rh4DG239000 Rh4DG294000 Rh6DG304800 Rh7DG149500
rosa_wichuraiana Rw1G018070 Rw1G021220 Rw1G021820 Rw1G026430 Rw2G050800 Rw3G023330 Rw6G010050 Rw6G010440 Rw7G031930 Rw7G033860

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1116
AasI GACNNNNNNGTC 3 cut(s) 58, 157, 193
Acc36I ACCTGC 1 cut(s) 676
AccBSI CCGCTC 1 cut(s) 125
AccI GTMKAC 2 cut(s) 1158, 1464
AciI CCGC 4 cut(s) 125, 155, 1066, 1270
AcsI RAATTY 2 cut(s) 674, 1421
AcuI CTGAAG 3 cut(s) 54, 732, 1479
AcvI CACGTG 1 cut(s) 353
AcyI GRCGYC 2 cut(s) 152, 1161
AfaI GTAC 3 cut(s) 569, 1052, 1149
AfiI CCNNNNNNNGG 4 cut(s) 124, 338, 353, 1486
AflII CTTAAG 1 cut(s) 307
AflIII ACRYGT 1 cut(s) 1264
AgsI TTSAA 7 cut(s) 560, 665, 854, 884, 959, 991, 1142
AjnI CCWGG 4 cut(s) 249, 935, 943, 1479
AloI GAACNNNNNNTCC 2 cut(s) 402, 434
Alw21I GWGCWC 2 cut(s) 388, 1357
Alw26I GTCTC 5 cut(s) 21, 44, 598, 840, 1379
Ama87I CYCGRG 1 cut(s) 1356
AoxI GGCC 1 cut(s) 1227
ApeKI GCWGC 2 cut(s) 275, 614
ApoI RAATTY 2 cut(s) 674, 1421
AspS9I GGNCC 2 cut(s) 1227, 1449
AsuHPI GGTGA 2 cut(s) 304, 336
AvaI CYCGRG 1 cut(s) 1356
AvaII GGWCC 1 cut(s) 1449
BanII GRGCYC 2 cut(s) 727, 1357
BbrPI CACGTG 1 cut(s) 353
BbsI GAAGAC 4 cut(s) 191, 556, 643, 1331
Bbv12I GWGCWC 2 cut(s) 388, 1357
BbvI GCAGC 2 cut(s) 262, 601
BccI CCATC 3 cut(s) 332, 466, 713
BceAI ACGGC 1 cut(s) 142
BciT130I CCWGG 4 cut(s) 251, 937, 945, 1481
BcoDI GTCTC 5 cut(s) 21, 44, 598, 840, 1379
BfaI CTAG 6 cut(s) 102, 407, 423, 459, 1341, 1367
BfrI CTTAAG 1 cut(s) 307
BfuAI ACCTGC 1 cut(s) 676
BisI GCNGC 4 cut(s) 155, 276, 615, 1066
BlsI GCNGC 4 cut(s) 156, 277, 616, 1067
BmcAI AGTACT 1 cut(s) 1052
Bme1390I CCNGG 4 cut(s) 251, 937, 945, 1481
Bme18I GGWCC 1 cut(s) 1449
BmeT110I CYCGRG 1 cut(s) 1356
BmgT120I GGNCC 2 cut(s) 1227, 1449
BmiI GGNNCC 2 cut(s) 112, 1478
BmrFI CCNGG 4 cut(s) 251, 937, 945, 1481
BmsI GCATC 4 cut(s) 736, 757, 1300, 1309
BpiI GAAGAC 4 cut(s) 191, 556, 643, 1331
BpmI CTGGAG 1 cut(s) 919
BpuEI CTTGAG 3 cut(s) 287, 1176, 1243
Bsa29I ATCGAT 1 cut(s) 897
BsaAI YACGTR 3 cut(s) 353, 688, 1265
BsaHI GRCGYC 2 cut(s) 152, 1161
BsaJI CCNNGG 4 cut(s) 162, 249, 944, 1499
BsaXI ACNNNNNCTCC 2 cut(s) 820, 850
Bsc4I CCNNNNNNNGG 4 cut(s) 124, 338, 353, 1486
Bse118I RCCGGY 1 cut(s) 1278
Bse1I ACTGG 2 cut(s) 589, 878
Bse3DI GCAATG 1 cut(s) 570
BseBI CCWGG 4 cut(s) 251, 937, 945, 1481
BseCI ATCGAT 1 cut(s) 897
BseDI CCNNGG 4 cut(s) 162, 249, 944, 1499
BseGI GGATG 3 cut(s) 477, 751, 1324
BseLI CCNNNNNNNGG 4 cut(s) 124, 338, 353, 1486
BseMI GCAATG 1 cut(s) 570
BseMII CTCAG 5 cut(s) 54, 581, 1014, 1317, 1436
BseNI ACTGG 2 cut(s) 589, 878
BseRI GAGGAG 3 cut(s) 182, 431, 828
BseXI GCAGC 2 cut(s) 262, 601
BsgI GTGCAG 1 cut(s) 816
BshFI GGCC 1 cut(s) 1229
BshVI ATCGAT 1 cut(s) 897
BsiHKAI GWGCWC 2 cut(s) 388, 1357
BsiHKCI CYCGRG 1 cut(s) 1356
BsiSI CCGG 1 cut(s) 1279
BslFI GGGAC 2 cut(s) 961, 1226
BslI CCNNNNNNNGG 4 cut(s) 124, 338, 353, 1486
BsmAI GTCTC 5 cut(s) 21, 44, 598, 840, 1379
BsmFI GGGAC 2 cut(s) 961, 1226
BsmI GAATGC 2 cut(s) 217, 1081
BsnI GGCC 1 cut(s) 1229
BsoBI CYCGRG 1 cut(s) 1356
Bsp1286I GDGCHC 3 cut(s) 388, 727, 1357
Bsp1407I TGTACA 1 cut(s) 1147
Bsp143I GATC 3 cut(s) 398, 446, 867
BspACI CCGC 4 cut(s) 125, 155, 1066, 1270
BspANI GGCC 1 cut(s) 1229
BspCNI CTCAG 5 cut(s) 53, 582, 1015, 1316, 1437
BspDI ATCGAT 1 cut(s) 897
BspHI TCATGA 1 cut(s) 1087
BspLI GGNNCC 2 cut(s) 112, 1478
BspMI ACCTGC 1 cut(s) 676
BspTI CTTAAG 1 cut(s) 307
BsrBI CCGCTC 1 cut(s) 125
BsrDI GCAATG 1 cut(s) 570
BsrFI RCCGGY 1 cut(s) 1278
BsrGI TGTACA 1 cut(s) 1147
BsrI ACTGG 2 cut(s) 589, 878
BssAI RCCGGY 1 cut(s) 1278
BssECI CCNNGG 4 cut(s) 162, 249, 944, 1499
BssMI GATC 3 cut(s) 398, 446, 867
BssNI GRCGYC 2 cut(s) 152, 1161
BssT1I CCWWGG 2 cut(s) 162, 1499
Bst2UI CCWGG 4 cut(s) 251, 937, 945, 1481
Bst4CI ACNGT 3 cut(s) 555, 609, 1147
Bst6I CTCTTC 3 cut(s) 26, 960, 1479
BstACI GRCGYC 2 cut(s) 152, 1161
BstAFI CTTAAG 1 cut(s) 307
BstAPI GCANNNNNTGC 2 cut(s) 223, 1292
BstAUI TGTACA 1 cut(s) 1147
BstBAI YACGTR 3 cut(s) 353, 688, 1265
BstC8I GCNNGC 6 cut(s) 273, 577, 1174, 1280, 1284, 1414
BstEII GGTNACC 1 cut(s) 939
BstF5I GGATG 3 cut(s) 477, 751, 1324
BstKTI GATC 3 cut(s) 401, 449, 870
BstMAI GTCTC 5 cut(s) 21, 44, 598, 840, 1379
BstMBI GATC 3 cut(s) 398, 446, 867
BstMWI GCNNNNNNNGC 5 cut(s) 223, 484, 1169, 1292, 1319
BstNI CCWGG 4 cut(s) 251, 937, 945, 1481
BstNSI RCATGY 2 cut(s) 579, 1416
BstPI GGTNACC 1 cut(s) 939
BstSCI CCNGG 4 cut(s) 249, 935, 943, 1479
BstSNI TACGTA 1 cut(s) 688
BstV1I GCAGC 2 cut(s) 262, 601
BstV2I GAAGAC 4 cut(s) 191, 556, 643, 1331
Bsu15I ATCGAT 1 cut(s) 897
BsuRI GGCC 1 cut(s) 1229
BsuTUI ATCGAT 1 cut(s) 897
BtsCI GGATG 3 cut(s) 477, 751, 1324
BtsI GCAGTG 1 cut(s) 804
BtsIMutI CAGTG 1 cut(s) 804
BveI ACCTGC 1 cut(s) 676
Cac8I GCNNGC 6 cut(s) 273, 577, 1174, 1280, 1284, 1414
CciI TCATGA 1 cut(s) 1087
Cfr10I RCCGGY 1 cut(s) 1278
Cfr13I GGNCC 2 cut(s) 1227, 1449
ClaI ATCGAT 1 cut(s) 897
CseI GACGC 2 cut(s) 160, 1169
Csp6I GTAC 3 cut(s) 568, 1051, 1148
CviAII CATG 6 cut(s) 229, 452, 576, 1088, 1246, 1413
CviQI GTAC 3 cut(s) 568, 1051, 1148
DpnI GATC 3 cut(s) 400, 448, 869
DpnII GATC 3 cut(s) 398, 446, 867
DrdI GACNNNNNNGTC 3 cut(s) 58, 157, 193
DseDI GACNNNNNNGTC 3 cut(s) 58, 157, 193
Eam1104I CTCTTC 3 cut(s) 26, 960, 1479
EarI CTCTTC 3 cut(s) 26, 960, 1479
Ecl136II GAGCTC 1 cut(s) 1355
Eco105I TACGTA 1 cut(s) 688
Eco130I CCWWGG 2 cut(s) 162, 1499
Eco24I GRGCYC 2 cut(s) 727, 1357
Eco47I GGWCC 1 cut(s) 1449
Eco53kI GAGCTC 1 cut(s) 1355
Eco57I CTGAAG 3 cut(s) 54, 732, 1479
Eco72I CACGTG 1 cut(s) 353
Eco88I CYCGRG 1 cut(s) 1356
Eco91I GGTNACC 1 cut(s) 939
EcoICRI GAGCTC 1 cut(s) 1355
EcoO109I RGGNCCY 1 cut(s) 1227
EcoO65I GGTNACC 1 cut(s) 939
EcoRII CCWGG 4 cut(s) 249, 935, 943, 1479
EcoT14I CCWWGG 2 cut(s) 162, 1499
EcoT22I ATGCAT 1 cut(s) 1081
EcoT38I GRGCYC 2 cut(s) 727, 1357
ErhI CCWWGG 2 cut(s) 162, 1499
FaeI CATG 6 cut(s) 232, 455, 579, 1091, 1249, 1416
FalI AAGNNNNNCTT 2 cut(s) 857, 889
FaqI GGGAC 2 cut(s) 961, 1226
FatI CATG 6 cut(s) 228, 451, 575, 1087, 1245, 1412
FblI GTMKAC 2 cut(s) 1158, 1464
Fnu4HI GCNGC 4 cut(s) 155, 276, 615, 1066
FokI GGATG 3 cut(s) 484, 758, 1331
FriOI GRGCYC 2 cut(s) 727, 1357
Fsp4HI GCNGC 4 cut(s) 155, 276, 615, 1066
FspBI CTAG 6 cut(s) 102, 407, 423, 459, 1341, 1367
GluI GCNGC 4 cut(s) 155, 276, 615, 1066
GsuI CTGGAG 1 cut(s) 919
HaeIII GGCC 1 cut(s) 1229
HapII CCGG 1 cut(s) 1279
HgaI GACGC 2 cut(s) 160, 1169
Hin1I GRCGYC 2 cut(s) 152, 1161
Hin1II CATG 6 cut(s) 232, 455, 579, 1091, 1249, 1416
HincII GTYRAC 2 cut(s) 256, 1159
HindII GTYRAC 2 cut(s) 256, 1159
HindIII AAGCTT 1 cut(s) 1170
HpaI GTTAAC 1 cut(s) 256
HpaII CCGG 1 cut(s) 1279
HphI GGTGA 2 cut(s) 304, 336
Hpy166II GTNNAC 5 cut(s) 256, 300, 685, 1159, 1465
Hpy188III TCNNGA 9 cut(s) 430, 533, 842, 1088, 1193, 1384, 1397, 1438, 1452
Hpy8I GTNNAC 5 cut(s) 256, 300, 685, 1159, 1465
Hpy99I CGWCG 2 cut(s) 64, 1163
HpyAV CCTTC 7 cut(s) 127, 199, 226, 492, 536, 1038, 1096
HpyCH4III ACNGT 3 cut(s) 555, 609, 1147
HpyCH4IV ACGT 3 cut(s) 352, 687, 1264
HpyF10VI GCNNNNNNNGC 5 cut(s) 223, 484, 1169, 1292, 1319
HpySE526I ACGT 3 cut(s) 352, 687, 1264
Hsp92I GRCGYC 2 cut(s) 152, 1161
Hsp92II CATG 6 cut(s) 232, 455, 579, 1091, 1249, 1416
KroI GCCGGC 1 cut(s) 1278
KroNI GCCGGC 1 cut(s) 1280
KspAI GTTAAC 1 cut(s) 256
Kzo9I GATC 3 cut(s) 398, 446, 867
LmnI GCTCC 5 cut(s) 235, 444, 938, 1130, 1501
Lsp1109I GCAGC 2 cut(s) 262, 601
LweI GCATC 4 cut(s) 736, 757, 1300, 1309
MaeI CTAG 6 cut(s) 102, 407, 423, 459, 1341, 1367
MaeII ACGT 3 cut(s) 352, 687, 1264
MaeIII GTNAC 2 cut(s) 939, 1489
MalI GATC 3 cut(s) 400, 448, 869
MbiI CCGCTC 1 cut(s) 125
MboI GATC 3 cut(s) 398, 446, 867
MhlI GDGCHC 3 cut(s) 388, 727, 1357
MluCI AATT 6 cut(s) 626, 656, 674, 959, 1118, 1421
MlyI GAGTC 6 cut(s) 53, 523, 821, 1183, 1295, 1450
MmeI TCCRAC 4 cut(s) 74, 581, 612, 1234
Mph1103I ATGCAT 1 cut(s) 1081
MroNI GCCGGC 1 cut(s) 1278
MseI TTAA 4 cut(s) 255, 308, 678, 1167
MslI CAYNNNNRTG 2 cut(s) 765, 1092
MspCI CTTAAG 1 cut(s) 307
MspI CCGG 1 cut(s) 1279
MspR9I CCNGG 4 cut(s) 251, 937, 945, 1481
Mva1269I GAATGC 2 cut(s) 217, 1081
MvaI CCWGG 4 cut(s) 251, 937, 945, 1481
MwoI GCNNNNNNNGC 5 cut(s) 223, 484, 1169, 1292, 1319
NaeI GCCGGC 1 cut(s) 1280
NdeII GATC 3 cut(s) 398, 446, 867
NgoMIV GCCGGC 1 cut(s) 1278
NlaIII CATG 6 cut(s) 232, 455, 579, 1091, 1249, 1416
NlaIV GGNNCC 2 cut(s) 112, 1478
NsiI ATGCAT 1 cut(s) 1081
NspI RCATGY 2 cut(s) 579, 1416
PaeI GCATGC 2 cut(s) 579, 1416
PaeR7I CTCGAG 1 cut(s) 1356
PagI TCATGA 1 cut(s) 1087
PctI GAATGC 2 cut(s) 217, 1081
PdiI GCCGGC 1 cut(s) 1280
PfeI GAWTC 4 cut(s) 77, 914, 1019, 1393
PfoI TCCNGGA 1 cut(s) 1479
PkrI GCNGC 4 cut(s) 156, 277, 616, 1067
PleI GAGTC 6 cut(s) 52, 523, 820, 1183, 1295, 1449
PmaCI CACGTG 1 cut(s) 353
PmlI CACGTG 1 cut(s) 353
PpsI GAGTC 6 cut(s) 52, 523, 820, 1183, 1295, 1449
Ppu21I YACGTR 3 cut(s) 353, 688, 1265
PsiI TTATAA 1 cut(s) 1116
Psp124BI GAGCTC 1 cut(s) 1357
Psp6I CCWGG 4 cut(s) 249, 935, 943, 1479
PspCI CACGTG 1 cut(s) 353
PspEI GGTNACC 1 cut(s) 939
PspGI CCWGG 4 cut(s) 249, 935, 943, 1479
PspN4I GGNNCC 2 cut(s) 112, 1478
PspPI GGNCC 2 cut(s) 1227, 1449
PspXI VCTCGAGB 1 cut(s) 1356
RsaI GTAC 3 cut(s) 569, 1052, 1149
RsaNI GTAC 3 cut(s) 568, 1051, 1148
RseI CAYNNNNRTG 2 cut(s) 765, 1092
SacI GAGCTC 1 cut(s) 1357
SalI GTCGAC 1 cut(s) 1157
SaqAI TTAA 4 cut(s) 255, 308, 678, 1167
SatI GCNGC 4 cut(s) 155, 276, 615, 1066
Sau3AI GATC 3 cut(s) 398, 446, 867
Sau96I GGNCC 2 cut(s) 1227, 1449
ScaI AGTACT 1 cut(s) 1052
SchI GAGTC 6 cut(s) 53, 523, 821, 1183, 1295, 1450
ScrFI CCNGG 4 cut(s) 251, 937, 945, 1481
SduI GDGCHC 3 cut(s) 388, 727, 1357
SfaNI GCATC 4 cut(s) 736, 757, 1300, 1309
Sfr274I CTCGAG 1 cut(s) 1356
SinI GGWCC 1 cut(s) 1449
SlaI CTCGAG 1 cut(s) 1356
SmiMI CAYNNNNRTG 2 cut(s) 765, 1092
SmlI CTYRAG 5 cut(s) 266, 307, 1191, 1222, 1356
SmoI CTYRAG 5 cut(s) 266, 307, 1191, 1222, 1356
SnaBI TACGTA 1 cut(s) 688
SphI GCATGC 2 cut(s) 579, 1416
Sse9I AATT 6 cut(s) 626, 656, 674, 959, 1118, 1421
SsiI CCGC 4 cut(s) 125, 155, 1066, 1270
SspMI CTAG 6 cut(s) 102, 407, 423, 459, 1341, 1367
SstI GAGCTC 1 cut(s) 1357
StyD4I CCNGG 4 cut(s) 249, 935, 943, 1479
StyI CCWWGG 2 cut(s) 162, 1499
TaaI ACNGT 3 cut(s) 555, 609, 1147
TaiI ACGT 3 cut(s) 355, 690, 1267
TaqI TCGA 7 cut(s) 197, 382, 897, 1158, 1357, 1383, 1437
TasI AATT 6 cut(s) 626, 656, 674, 959, 1118, 1421
TatI WGTACW 3 cut(s) 567, 1050, 1147
TauI GCSGC 2 cut(s) 157, 1068
TfiI GAWTC 4 cut(s) 77, 914, 1019, 1393
Tru1I TTAA 4 cut(s) 255, 308, 678, 1167
Tru9I TTAA 4 cut(s) 255, 308, 678, 1167
TscAI CASTG 1 cut(s) 804
TseI GCWGC 2 cut(s) 275, 614
TspDTI ATGAA 6 cut(s) 245, 555, 1076, 1104, 1115, 1262
TspGWI ACGGA 1 cut(s) 48
TspRI CASTG 1 cut(s) 804
Vha464I CTTAAG 1 cut(s) 307
VpaK11BI GGWCC 1 cut(s) 1449
XapI RAATTY 2 cut(s) 674, 1421
XceI RCATGY 2 cut(s) 579, 1416
XhoI CTCGAG 1 cut(s) 1356
XmiI GTMKAC 2 cut(s) 1158, 1464
XspI CTAG 6 cut(s) 102, 407, 423, 459, 1341, 1367
ZrmI AGTACT 1 cut(s) 1052
Zsp2I ATGCAT 1 cut(s) 1081
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.