ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 131 |
| AccIII | TCCGGA | 1 cut(s) | 406 |
| AclI | AACGTT | 1 cut(s) | 64 |
| AcoI | YGGCCR | 1 cut(s) | 375 |
| AcsI | RAATTY | 2 cut(s) | 16, 251 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 480 |
| AgsI | TTSAA | 4 cut(s) | 110, 318, 352, 361 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 482, 514 |
| AluBI | AGCT | 3 cut(s) | 185, 197, 242 |
| AluI | AGCT | 3 cut(s) | 185, 197, 242 |
| Aor13HI | TCCGGA | 1 cut(s) | 406 |
| AoxI | GGCC | 3 cut(s) | 34, 52, 375 |
| ApoI | RAATTY | 2 cut(s) | 16, 251 |
| AspS9I | GGNCC | 3 cut(s) | 52, 404, 421 |
| AsuC2I | CCSGG | 1 cut(s) | 271 |
| AvaII | GGWCC | 2 cut(s) | 404, 421 |
| BalI | TGGCCA | 1 cut(s) | 377 |
| BccI | CCATC | 1 cut(s) | 101 |
| BciVI | GTATCC | 1 cut(s) | 293 |
| BcnI | CCSGG | 1 cut(s) | 271 |
| BfuAI | ACCTGC | 1 cut(s) | 131 |
| BfuI | GTATCC | 1 cut(s) | 293 |
| Bme1390I | CCNGG | 1 cut(s) | 271 |
| Bme18I | GGWCC | 2 cut(s) | 404, 421 |
| BmgT120I | GGNCC | 3 cut(s) | 52, 404, 421 |
| BmiI | GGNNCC | 3 cut(s) | 53, 422, 469 |
| BmrFI | CCNGG | 1 cut(s) | 271 |
| BpuMI | CCSGG | 1 cut(s) | 271 |
| BsaJI | CCNNGG | 3 cut(s) | 31, 270, 325 |
| BsaWI | WCCGGW | 1 cut(s) | 406 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 480 |
| Bse1I | ACTGG | 3 cut(s) | 8, 55, 406 |
| Bse3DI | GCAATG | 1 cut(s) | 400 |
| BseAI | TCCGGA | 1 cut(s) | 406 |
| BseDI | CCNNGG | 3 cut(s) | 31, 270, 325 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 480 |
| BseMI | GCAATG | 1 cut(s) | 400 |
| BseMII | CTCAG | 2 cut(s) | 149, 252 |
| BseNI | ACTGG | 3 cut(s) | 8, 55, 406 |
| BseRI | GAGGAG | 1 cut(s) | 506 |
| BseYI | CCCAGC | 1 cut(s) | 181 |
| BshFI | GGCC | 3 cut(s) | 36, 54, 377 |
| BsiSI | CCGG | 3 cut(s) | 21, 270, 407 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 480 |
| BsmI | GAATGC | 1 cut(s) | 301 |
| BsnI | GGCC | 3 cut(s) | 36, 54, 377 |
| Bsp13I | TCCGGA | 1 cut(s) | 406 |
| BspANI | GGCC | 3 cut(s) | 36, 54, 377 |
| BspCNI | CTCAG | 2 cut(s) | 148, 251 |
| BspEI | TCCGGA | 1 cut(s) | 406 |
| BspLI | GGNNCC | 3 cut(s) | 53, 422, 469 |
| BspMI | ACCTGC | 1 cut(s) | 131 |
| BsrDI | GCAATG | 1 cut(s) | 400 |
| BsrI | ACTGG | 3 cut(s) | 8, 55, 406 |
| BssECI | CCNNGG | 3 cut(s) | 31, 270, 325 |
| BssT1I | CCWWGG | 2 cut(s) | 31, 325 |
| Bst4CI | ACNGT | 2 cut(s) | 46, 494 |
| Bst6I | CTCTTC | 1 cut(s) | 212 |
| BstC8I | GCNNGC | 1 cut(s) | 375 |
| BstDEI | CTNAG | 2 cut(s) | 135, 238 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 182, 374 |
| BstSCI | CCNGG | 1 cut(s) | 269 |
| BsuI | GTATCC | 1 cut(s) | 293 |
| BsuRI | GGCC | 3 cut(s) | 36, 54, 377 |
| BtsIMutI | CAGTG | 3 cut(s) | 15, 91, 399 |
| BveI | ACCTGC | 1 cut(s) | 131 |
| Cac8I | GCNNGC | 1 cut(s) | 375 |
| Cfr13I | GGNCC | 3 cut(s) | 52, 404, 421 |
| CviAII | CATG | 1 cut(s) | 387 |
| DdeI | CTNAG | 2 cut(s) | 135, 238 |
| EaeI | YGGCCR | 1 cut(s) | 375 |
| Eam1104I | CTCTTC | 1 cut(s) | 212 |
| EarI | CTCTTC | 1 cut(s) | 212 |
| Eco130I | CCWWGG | 2 cut(s) | 31, 325 |
| Eco32I | GATATC | 1 cut(s) | 232 |
| Eco47I | GGWCC | 2 cut(s) | 404, 421 |
| EcoRV | GATATC | 1 cut(s) | 232 |
| EcoT14I | CCWWGG | 2 cut(s) | 31, 325 |
| ErhI | CCWWGG | 2 cut(s) | 31, 325 |
| FaeI | CATG | 1 cut(s) | 390 |
| FaiI | YATR | 6 cut(s) | 81, 158, 388, 452, 497, 530 |
| FatI | CATG | 1 cut(s) | 386 |
| GsaI | CCCAGC | 1 cut(s) | 185 |
| HaeIII | GGCC | 3 cut(s) | 36, 54, 377 |
| HapII | CCGG | 3 cut(s) | 21, 270, 407 |
| Hin1II | CATG | 1 cut(s) | 390 |
| HinfI | GANTC | 2 cut(s) | 89, 410 |
| HpaII | CCGG | 3 cut(s) | 21, 270, 407 |
| Hpy188I | TCNGA | 3 cut(s) | 192, 344, 425 |
| Hpy188III | TCNNGA | 2 cut(s) | 40, 407 |
| HpyAV | CCTTC | 1 cut(s) | 447 |
| HpyCH4III | ACNGT | 2 cut(s) | 46, 494 |
| HpyCH4IV | ACGT | 2 cut(s) | 64, 446 |
| HpyCH4V | TGCA | 1 cut(s) | 393 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 182, 374 |
| HpyF3I | CTNAG | 2 cut(s) | 135, 238 |
| HpySE526I | ACGT | 2 cut(s) | 64, 446 |
| Hsp92II | CATG | 1 cut(s) | 390 |
| Kpn2I | TCCGGA | 1 cut(s) | 406 |
| LmnI | GCTCC | 1 cut(s) | 467 |
| MaeII | ACGT | 2 cut(s) | 64, 446 |
| MaeIII | GTNAC | 2 cut(s) | 86, 397 |
| MboII | GAAGA | 2 cut(s) | 199, 438 |
| MlsI | TGGCCA | 1 cut(s) | 377 |
| MluCI | AATT | 5 cut(s) | 16, 161, 251, 380, 540 |
| MluNI | TGGCCA | 1 cut(s) | 377 |
| MlyI | GAGTC | 2 cut(s) | 83, 419 |
| MmeI | TCCRAC | 1 cut(s) | 95 |
| MnlI | CCTC | 5 cut(s) | 47, 272, 481, 524, 527 |
| Mox20I | TGGCCA | 1 cut(s) | 377 |
| MroI | TCCGGA | 1 cut(s) | 406 |
| MscI | TGGCCA | 1 cut(s) | 377 |
| Msp20I | TGGCCA | 1 cut(s) | 377 |
| MspI | CCGG | 3 cut(s) | 21, 270, 407 |
| MspR9I | CCNGG | 1 cut(s) | 271 |
| Mva1269I | GAATGC | 1 cut(s) | 301 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 182, 374 |
| NciI | CCSGG | 1 cut(s) | 271 |
| NlaIII | CATG | 1 cut(s) | 390 |
| NlaIV | GGNNCC | 3 cut(s) | 53, 422, 469 |
| NmuCI | GTSAC | 2 cut(s) | 86, 397 |
| PctI | GAATGC | 1 cut(s) | 301 |
| PleI | GAGTC | 2 cut(s) | 83, 418 |
| PpsI | GAGTC | 2 cut(s) | 83, 418 |
| Psp1406I | AACGTT | 1 cut(s) | 64 |
| PspFI | CCCAGC | 1 cut(s) | 181 |
| PspN4I | GGNNCC | 3 cut(s) | 53, 422, 469 |
| PspPI | GGNCC | 3 cut(s) | 52, 404, 421 |
| Sau96I | GGNCC | 3 cut(s) | 52, 404, 421 |
| SchI | GAGTC | 2 cut(s) | 83, 419 |
| ScrFI | CCNGG | 1 cut(s) | 271 |
| SinI | GGWCC | 2 cut(s) | 404, 421 |
| Sse9I | AATT | 5 cut(s) | 16, 161, 251, 380, 540 |
| StyD4I | CCNGG | 1 cut(s) | 269 |
| StyI | CCWWGG | 2 cut(s) | 31, 325 |
| TaaI | ACNGT | 2 cut(s) | 46, 494 |
| TaiI | ACGT | 2 cut(s) | 67, 449 |
| TasI | AATT | 5 cut(s) | 16, 161, 251, 380, 540 |
| TscAI | CASTG | 3 cut(s) | 15, 91, 406 |
| TseFI | GTSAC | 2 cut(s) | 86, 397 |
| Tsp45I | GTSAC | 2 cut(s) | 86, 397 |
| TspDTI | ATGAA | 2 cut(s) | 17, 429 |
| TspRI | CASTG | 3 cut(s) | 15, 91, 406 |
| VpaK11BI | GGWCC | 2 cut(s) | 404, 421 |
| XapI | RAATTY | 2 cut(s) | 16, 251 |