Rh6DG304800

ribonuclease H protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6D
OG0000194
Physical Location & Seq
Forward (+)
50497495 .. 50500595
3101 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6DG304800.1

Sequence Viewer

Length: 1557 bp
ATGACAAGGTACACTGGAAGTCATGGGATACCTTGTGTAGACGCAAGGCAGAGGGGGGGGGGAGGTATGGGCTTTAAAGACCAGCGCAATTACAATCTGGCCCTCCTGGCTAGGCAGTGTTGGAGATTGATAAATAACCCCGATTCCTTGTGGAGTAGAATTCTGAAAGCCCGTTACTTTGCTAATTCCTCATTCCTAGACGCGAAGAAAGGAGCTAGGCCTTCATGGATTTGGAACAGCCTGTTGGCTGGGAGGGAGACCATCTCCATGAATGCGTTATGGCAAGTGGCTAATGGTAGAAAGATCGATGTTTGGAAGGATAGATGGGTTCCGAATAATAATGGTGGCCTAATCAAGCCTACCATCACCTCAAATAGGTTTATTCCTCTTCTTGTGTCGGAGATCATTGATGAGAACCTGAATTGGAACTTAGACCACCTGGAACCCTTCCTTGAAGCCTCTGACCTAAGAACCATTAAAGCTATTCCTGCCAATAATACTGGGGAAGACACCTTGATCTGGCCCCACACAAAGAATGGTTCTTACACAGTCAAAAGCGAATATCAGAAGCTGGTCTCATCCACTACAACCCCTCCCAGATGTAAGCCTTCTTCCTCTAATAAGGTGAATAAGTCAATTTGGAATCTGATTTGGGGTTGTAAGGTGTTACCAAAAATCTCAAATTTCACTTGGAGAGCTATCTCTAATGCGCTCCCGATTGATTGGAATGCTTTCAAAAGAAAGATATCTCCTACTCCCTTGTGTGCTATTTGTGGAGAGTACACAGAGACAAAAGAGCACTGCCTCCTTTTGTGCCCTTGGACCACGGCGGTATGGTATGGCTGTAATCTTGGTTACTCTCCAAACAAGGGATCGATCACAACTCAGGATGCCTGGCTCCTAAGGATTCAGGAGAAGGCCTGCTGCCTCTCAAATGATCCTTCTTGTGTCATTCAAAAAGTGCTGATCTTGATGTGGGAAATCTGGAAACAGAGATGTGAGGCTGTGATGAGAAGCTGCAACCCTAGACCAATGGTAGTGATTGAAAATGCCCAACGCAGTTTTAATGAATGGTCTGCCTCCTTAGACTTGATGGATAAAAGCTCCCACTCTAGGTATGAAAGTTTCCACCCACCGCTTTGGTCAGCGCCAAGTCCTCCCTTTGTCAAAGTCAATGTAGATGGCGCTTGGGACCAGTCCAATCATAGTAGTGGGATTGGTAGTATCATCAGAAACCATCGGGGCCACTCCCTTGCTGGAGCTAACATCCATGGATGTCATAACTCGGCAGTGGAGGTGGAGGCCGAAGCTGTGGTGAGGGGGTTCCAACTGGCCTCCTCTTTAAATCTCAGAAACATTATTCTGGAAGGAGATTGCAAGGATGTTCTCAAGGCTATTGTCACCCACTGTTGGAGAATTTCCCTAATGATCAGCAAAGTTTCTCATCTGAAATCTCTTTTTCATGGGATCAATTGGAATTGGATCCCGCGTGAAGCTAACCGAGTTGCTGATGCAGCGGCAAAGCTTGCTAAAATGAGGTTGTGCTCCCAGGAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4283 RVT_1 RVT_3 zf-CCHC_4 zf-RVT

Protein Analysis

518

Amino Acids

58.47

Weight (kDa)

9.31

Isoelectric Point (pI)

33.46

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-RVT PF13966 205 - 279 3.2e-15 zinc-binding in reverse transcriptase
RVT_3 PF13456 392 - 510 1.5e-24 Reverse transcriptase-like
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000194)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G34320 AT4G29090 AT5G42965
fragaria_vesca FvH4_1g19471 FvH4_1g29471 FvH4_1g29601 FvH4_2g04611 FvH4_2g05763 FvH4_2g11451 FvH4_2g11841 FvH4_3g10391 FvH4_3g21491 FvH4_3g21492 FvH4_3g32111 FvH4_3g35051 FvH4_4g06793 FvH4_5g08844 FvH4_5g15942 FvH4_5g18751 FvH4_5g27367 FvH4_6g11612 FvH4_6g20242 FvH4_6g27671 FvH4_6g31921 FvH4_7g32463
malus_domestica MD06G1107000.v1.1 MD07G1135800.v1.1 MD08G1205700.v1.1
prunus_persica Prupe.1G202000_v2.0.a1 Prupe.2G049100_v2.0.a1 Prupe.2G060500_v2.0.a1 Prupe.3G120300_v2.0.a1 Prupe.3G135000_v2.0.a1 Prupe.6G087800_v2.0.a1 Prupe.6G158500_v2.0.a1 Prupe.6G353900_v2.0.a1 Prupe.7G008600_v2.0.a1 Prupe.8G090500_v2.0.a1
pyrus_communis pycom01g21690 pycom02g19910 pycom04g18080 pycom07g08600 pycom07g18710 pycom07g26560 pycom08g03130 pycom08g13950 pycom09g06380 pycom10g13390 pycom10g22280 pycom11g04440 pycom11g10940 pycom12g04710 pycom13g08790 pycom15g31740 pycom17g14740 pycom17g24980
rosa_chinensis RchiOBHm_Chr1g0327801 RchiOBHm_Chr1g0347181 RchiOBHm_Chr1g0348821 RchiOBHm_Chr2g0157831 RchiOBHm_Chr5g0040851 RchiOBHm_Chr6g0249781 RchiOBHm_Chr7g0208461 RchiOBHm_Chr7g0210911 RchiOBHm_Chr7g0219141
rosa_laevigata RLG00000034326
rosa_multiflora Rmu_co8140276.1_g000001 Rmu_co8282095.1_g000001 Rmu_co8303311.1_g000001 Rmu_co8314215.1_g000001 Rmu_co8345435.1_g000001 Rmu_co8461745.1_g000001 Rmu_sc0000315.1_g000040 Rmu_sc0000487.1_g000014 Rmu_sc0000690.1_g000002 Rmu_sc0000808.1_g000001 Rmu_sc0000938.1_g000009 Rmu_sc0001260.1_g000002 Rmu_sc0001534.1_g000008 Rmu_sc0001669.1_g000003 Rmu_sc0001685.1_g000050 Rmu_sc0001838.1_g000007 Rmu_sc0002193.1_g000025 Rmu_sc0002308.1_g000058 Rmu_sc0002322.1_g000018 Rmu_sc0002529.1_g000008 Rmu_sc0002531.1_g000043 Rmu_sc0002754.1_g000022 Rmu_sc0002902.1_g000055 Rmu_sc0003627.1_g000005 Rmu_sc0003743.1_g000003 Rmu_sc0003765.1_g000016 Rmu_sc0003941.1_g000020 Rmu_sc0004038.1_g000011 Rmu_sc0004329.1_g000010 Rmu_sc0004476.1_g000002 Rmu_sc0004904.1_g000022 Rmu_sc0004988.1_g000017 Rmu_sc0005217.1_g000006 Rmu_sc0005257.1_g000010 Rmu_sc0005285.1_g000008 Rmu_sc0005687.1_g000001 Rmu_sc0006380.1_g000020 Rmu_sc0006922.1_g000004 Rmu_sc0007398.1_g000007 Rmu_sc0008279.1_g000019 Rmu_sc0009139.1_g000004 Rmu_sc0009158.1_g000001 Rmu_sc0010099.1_g000002 Rmu_sc0019043.1_g000001 Rmu_sc0022037.1_g000001 Rmu_sc0023291.1_g000001 Rmu_sc0031928.1_g000001 Rmu_sc0034436.1_g000002 Rmu_ssc0000126.1_g000001 Rmu_ssc0000151.1_g000016 Rmu_ssc0000152.1_g000009 Rmu_ssc0000395.1_g000031
rosa_roxburghii Rroxscaffold_1G00056570 Rroxscaffold_1G00058460 Rroxscaffold_2G00106120 Rroxscaffold_2G00106260 Rroxscaffold_6G00399080
rosa_rugosa Rorug02G0173300 Rorug02G0225600 Rorug03G0083300 Rorug03G0104900 Rorug04G0256500 Rorug05G0342600 Rorug06G0006200 Rorug06G0095200 Rorug06G0095600 Rorug06G0111500 Rorug07G0001200 Rorug07G0183100 Rorug07G0183100 Rorug07G0209000
rosa_samantha Rh2DG065400 Rh3DG315900 Rh4AG106100 Rh4BG362100 Rh4CG030200 Rh4DG239000 Rh4DG294000 Rh6DG304800 Rh7DG149500
rosa_wichuraiana Rw1G018070 Rw1G021220 Rw1G021820 Rw1G026430 Rw2G050800 Rw3G023330 Rw6G010050 Rw6G010440 Rw7G031930 Rw7G033860

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 39
AccII CGCG 2 cut(s) 203, 1489
AciI CCGC 4 cut(s) 830, 1136, 1487, 1517
AclWI GGATC 5 cut(s) 880, 932, 1475, 1477, 1490
AcsI RAATTY 3 cut(s) 159, 682, 1416
AfaI GTAC 2 cut(s) 11, 782
AfiI CCNNNNNNNGG 5 cut(s) 375, 519, 869, 1113, 1410
AgsI TTSAA 4 cut(s) 455, 736, 956, 1046
AjnI CCWGG 4 cut(s) 105, 438, 893, 1548
AjuI GAANNNNNNNTTGG 2 cut(s) 227, 259
Alw21I GWGCWC 2 cut(s) 801, 1547
Alw26I GTCTC 3 cut(s) 251, 580, 782
AlwI GGATC 5 cut(s) 880, 932, 1475, 1477, 1490
AlwNI CAGNNNCTG 1 cut(s) 571
AoxI GGCC 8 cut(s) 99, 218, 346, 521, 918, 1243, 1302, 1332
ApeKI GCWGC 3 cut(s) 924, 1017, 1514
ApoI RAATTY 3 cut(s) 159, 682, 1416
Asp700I GAANNNNTTC 1 cut(s) 731
AspLEI GCGC 4 cut(s) 87, 712, 1150, 1187
AspS9I GGNCC 5 cut(s) 100, 522, 822, 1192, 1243
AsuHPI GGTGA 4 cut(s) 358, 637, 1327, 1393
AvaII GGWCC 2 cut(s) 822, 1192
AxyI CCTNAGG 1 cut(s) 902
BaeGI GKGCMC 1 cut(s) 818
BamHI GGATCC 1 cut(s) 1482
BarI GAAGNNNNNNTAC 2 cut(s) 595, 627
BbsI GAAGAC 1 cut(s) 513
Bbv12I GWGCWC 2 cut(s) 801, 1547
BbvI GCAGC 3 cut(s) 911, 1004, 1526
BccI CCATC 6 cut(s) 269, 318, 371, 1087, 1175, 1245
BceAI ACGGC 1 cut(s) 843
BciT130I CCWGG 4 cut(s) 107, 440, 895, 1550
BciVI GTATCC 1 cut(s) 21
BclI TGATCA 1 cut(s) 1428
BcoDI GTCTC 3 cut(s) 251, 580, 782
BfaI CTAG 5 cut(s) 111, 197, 216, 1026, 1113
BfoI RGCGCY 2 cut(s) 1151, 1188
BfuI GTATCC 1 cut(s) 21
BglI GCCNNNNNGGC 1 cut(s) 107
BisI GCNGC 4 cut(s) 925, 1018, 1515, 1518
BlsI GCNGC 4 cut(s) 926, 1019, 1516, 1519
Bme1390I CCNGG 4 cut(s) 107, 440, 895, 1550
Bme18I GGWCC 2 cut(s) 822, 1192
BmgT120I GGNCC 5 cut(s) 100, 522, 822, 1192, 1243
BmiI GGNNCC 8 cut(s) 330, 444, 524, 899, 1193, 1244, 1325, 1484
BmrFI CCNGG 4 cut(s) 107, 440, 895, 1550
BmrI ACTGGG 1 cut(s) 510
BmsI GCATC 2 cut(s) 880, 1501
BmuI ACTGGG 1 cut(s) 510
BpiI GAAGAC 1 cut(s) 513
BplI GAGNNNNNCTC 2 cut(s) 248, 280
BpmI CTGGAG 1 cut(s) 1278
BpuEI CTTGAG 1 cut(s) 1373
Bsa29I ATCGAT 2 cut(s) 306, 875
BsaI GGTCTC 2 cut(s) 251, 580
BsaJI CCNNGG 4 cut(s) 818, 825, 1270, 1548
BsaXI ACNNNNNCTCC 2 cut(s) 577, 607
Bsc4I CCNNNNNNNGG 5 cut(s) 375, 519, 869, 1113, 1410
Bse1I ACTGG 4 cut(s) 19, 505, 1195, 1335
Bse21I CCTNAGG 1 cut(s) 902
BseBI CCWGG 4 cut(s) 107, 440, 895, 1550
BseCI ATCGAT 2 cut(s) 306, 875
BseDI CCNNGG 4 cut(s) 818, 825, 1270, 1548
BseGI GGATG 5 cut(s) 578, 895, 1266, 1280, 1387
BseLI CCNNNNNNNGG 5 cut(s) 375, 519, 869, 1113, 1410
BseMII CTCAG 2 cut(s) 899, 1363
BseNI ACTGG 4 cut(s) 19, 505, 1195, 1335
BseRI GAGGAG 1 cut(s) 1327
BseSI GKGCMC 1 cut(s) 818
BseXI GCAGC 3 cut(s) 911, 1004, 1526
BseYI CCCAGC 1 cut(s) 248
Bsh1236I CGCG 2 cut(s) 203, 1489
BshFI GGCC 8 cut(s) 101, 220, 348, 523, 920, 1245, 1304, 1334
BshVI ATCGAT 2 cut(s) 306, 875
BsiHKAI GWGCWC 2 cut(s) 801, 1547
BslFI GGGAC 1 cut(s) 1205
BslI CCNNNNNNNGG 5 cut(s) 375, 519, 869, 1113, 1410
BsmAI GTCTC 3 cut(s) 251, 580, 782
BsmFI GGGAC 1 cut(s) 1205
BsmI GAATGC 2 cut(s) 277, 733
BsnI GGCC 8 cut(s) 101, 220, 348, 523, 920, 1245, 1304, 1334
Bso31I GGTCTC 2 cut(s) 251, 580
Bsp1286I GDGCHC 3 cut(s) 801, 818, 1547
Bsp19I CCATGG 1 cut(s) 1270
BspACI CCGC 4 cut(s) 830, 1136, 1487, 1517
BspANI GGCC 8 cut(s) 101, 220, 348, 523, 920, 1245, 1304, 1334
BspCNI CTCAG 2 cut(s) 898, 1362
BspDI ATCGAT 2 cut(s) 306, 875
BspFNI CGCG 2 cut(s) 203, 1489
BspLI GGNNCC 8 cut(s) 330, 444, 524, 899, 1193, 1244, 1325, 1484
BspPI GGATC 5 cut(s) 880, 932, 1475, 1477, 1490
BspTNI GGTCTC 2 cut(s) 251, 580
BsrI ACTGG 4 cut(s) 19, 505, 1195, 1335
BssECI CCNNGG 4 cut(s) 818, 825, 1270, 1548
BssT1I CCWWGG 2 cut(s) 818, 1270
Bst2UI CCWGG 4 cut(s) 107, 440, 895, 1550
Bst4CI ACNGT 2 cut(s) 550, 1409
Bst6I CTCTTC 1 cut(s) 393
BstAPI GCANNNNNTGC 1 cut(s) 1526
BstC8I GCNNGC 2 cut(s) 922, 1527
BstDEI CTNAG 6 cut(s) 430, 467, 885, 902, 1084, 1349
BstDSI CCRYGG 2 cut(s) 825, 1270
BstENI CCTNNNNNAGG 1 cut(s) 373
BstF5I GGATG 5 cut(s) 578, 895, 1266, 1280, 1387
BstFNI CGCG 2 cut(s) 203, 1489
BstH2I RGCGCY 2 cut(s) 1151, 1188
BstHHI GCGC 4 cut(s) 87, 712, 1150, 1187
BstMAI GTCTC 3 cut(s) 251, 580, 782
BstMWI GCNNNNNNNGC 4 cut(s) 107, 488, 1514, 1526
BstNI CCWGG 4 cut(s) 107, 440, 895, 1550
BstSCI CCNGG 4 cut(s) 105, 438, 893, 1548
BstSLI GKGCMC 1 cut(s) 818
BstUI CGCG 2 cut(s) 203, 1489
BstV1I GCAGC 3 cut(s) 911, 1004, 1526
BstV2I GAAGAC 1 cut(s) 513
BstX2I RGATCY 1 cut(s) 1482
BstXI CCANNNNNNTGG 1 cut(s) 1140
BstYI RGATCY 1 cut(s) 1482
Bsu15I ATCGAT 2 cut(s) 306, 875
Bsu36I CCTNAGG 1 cut(s) 902
BsuI GTATCC 1 cut(s) 21
BsuRI GGCC 8 cut(s) 101, 220, 348, 523, 920, 1245, 1304, 1334
BsuTUI ATCGAT 2 cut(s) 306, 875
BtgI CCRYGG 2 cut(s) 825, 1270
BtsCI GGATG 5 cut(s) 578, 895, 1266, 1280, 1387
BtsI GCAGTG 3 cut(s) 122, 799, 1296
BtsIMutI CAGTG 5 cut(s) 12, 122, 799, 1296, 1405
Cac8I GCNNGC 2 cut(s) 922, 1527
CaiI CAGNNNCTG 1 cut(s) 571
CfoI GCGC 4 cut(s) 87, 712, 1150, 1187
Cfr13I GGNCC 5 cut(s) 100, 522, 822, 1192, 1243
ClaI ATCGAT 2 cut(s) 306, 875
CseI GACGC 2 cut(s) 50, 209
Csp6I GTAC 2 cut(s) 10, 781
CviAII CATG 5 cut(s) 23, 225, 268, 1271, 1463
CviQI GTAC 2 cut(s) 10, 781
DdeI CTNAG 6 cut(s) 430, 467, 885, 902, 1084, 1349
DraI TTTAAA 2 cut(s) 76, 1344
Eam1104I CTCTTC 1 cut(s) 393
EarI CTCTTC 1 cut(s) 393
Eco130I CCWWGG 2 cut(s) 818, 1270
Eco147I AGGCCT 2 cut(s) 220, 920
Eco31I GGTCTC 2 cut(s) 251, 580
Eco32I GATATC 1 cut(s) 747
Eco47I GGWCC 2 cut(s) 822, 1192
Eco81I CCTNAGG 1 cut(s) 902
EcoNI CCTNNNNNAGG 1 cut(s) 373
EcoRI GAATTC 1 cut(s) 159
EcoRII CCWGG 4 cut(s) 105, 438, 893, 1548
EcoRV GATATC 1 cut(s) 747
EcoT14I CCWWGG 2 cut(s) 818, 1270
ErhI CCWWGG 2 cut(s) 818, 1270
FaeI CATG 5 cut(s) 26, 228, 271, 1274, 1466
FaqI GGGAC 1 cut(s) 1205
FatI CATG 5 cut(s) 22, 224, 267, 1270, 1462
FauI CCCGC 1 cut(s) 1494
FbaI TGATCA 1 cut(s) 1428
FblI GTMKAC 1 cut(s) 39
Fnu4HI GCNGC 4 cut(s) 925, 1018, 1515, 1518
FokI GGATG 5 cut(s) 565, 902, 1253, 1287, 1394
Fsp4HI GCNGC 4 cut(s) 925, 1018, 1515, 1518
FspBI CTAG 5 cut(s) 111, 197, 216, 1026, 1113
GlaI GCGC 4 cut(s) 86, 711, 1149, 1186
GluI GCNGC 4 cut(s) 925, 1018, 1515, 1518
GsaI CCCAGC 1 cut(s) 252
GsuI CTGGAG 1 cut(s) 1278
HaeII RGCGCY 2 cut(s) 1151, 1188
HaeIII GGCC 8 cut(s) 101, 220, 348, 523, 920, 1245, 1304, 1334
HgaI GACGC 2 cut(s) 50, 209
HhaI GCGC 4 cut(s) 87, 712, 1150, 1187
Hin1II CATG 5 cut(s) 26, 228, 271, 1274, 1466
Hin6I GCGC 4 cut(s) 85, 710, 1148, 1185
HinP1I GCGC 4 cut(s) 85, 710, 1148, 1185
HindIII AAGCTT 1 cut(s) 1523
HinfI GANTC 3 cut(s) 143, 643, 907
HphI GGTGA 4 cut(s) 358, 637, 1327, 1393
Hpy166II GTNNAC 3 cut(s) 12, 40, 783
Hpy188I TCNGA 9 cut(s) 165, 333, 400, 463, 567, 648, 1232, 1352, 1449
Hpy188III TCNNGA 6 cut(s) 715, 887, 911, 970, 985, 1364
Hpy8I GTNNAC 3 cut(s) 12, 40, 783
HpyAV CCTTC 7 cut(s) 231, 310, 457, 618, 910, 951, 1361
HpyCH4III ACNGT 2 cut(s) 550, 1409
HpyCH4V TGCA 3 cut(s) 1020, 1377, 1514
HpyF10VI GCNNNNNNNGC 4 cut(s) 107, 488, 1514, 1526
HpyF3I CTNAG 6 cut(s) 430, 467, 885, 902, 1084, 1349
Hsp92II CATG 5 cut(s) 26, 228, 271, 1274, 1466
HspAI GCGC 4 cut(s) 85, 710, 1148, 1185
Ksp22I TGATCA 1 cut(s) 1428
LmnI GCTCC 6 cut(s) 212, 717, 903, 1109, 1259, 1550
Lsp1109I GCAGC 3 cut(s) 911, 1004, 1526
LweI GCATC 2 cut(s) 880, 1501
MaeI CTAG 5 cut(s) 111, 197, 216, 1026, 1113
MaeIII GTNAC 4 cut(s) 173, 666, 854, 1399
MboII GAAGA 4 cut(s) 217, 380, 518, 603
MfeI CAATTG 1 cut(s) 1471
MflI RGATCY 1 cut(s) 1482
MhlI GDGCHC 3 cut(s) 801, 818, 1547
MluCI AATT 9 cut(s) 88, 159, 184, 421, 636, 682, 1416, 1471, 1477
MmeI TCCRAC 4 cut(s) 101, 378, 1351, 1391
MroXI GAANNNNTTC 1 cut(s) 731
MseI TTAA 4 cut(s) 75, 477, 1065, 1343
MslI CAYNNNNRTG 2 cut(s) 266, 1209
MspA1I CMGCKG 1 cut(s) 1517
MspR9I CCNGG 4 cut(s) 107, 440, 895, 1550
MunI CAATTG 1 cut(s) 1471
Mva1269I GAATGC 2 cut(s) 277, 733
MvaI CCWGG 4 cut(s) 107, 440, 895, 1550
MvnI CGCG 2 cut(s) 203, 1489
MwoI GCNNNNNNNGC 4 cut(s) 107, 488, 1514, 1526
NcoI CCATGG 1 cut(s) 1270
NlaIII CATG 5 cut(s) 26, 228, 271, 1274, 1466
NlaIV GGNNCC 8 cut(s) 330, 444, 524, 899, 1193, 1244, 1325, 1484
NmeAIII GCCGAG 1 cut(s) 1265
NmuCI GTSAC 1 cut(s) 1399
PceI AGGCCT 2 cut(s) 220, 920
PctI GAATGC 2 cut(s) 277, 733
PdmI GAANNNNTTC 1 cut(s) 731
PfeI GAWTC 3 cut(s) 143, 643, 907
PkrI GCNGC 4 cut(s) 926, 1019, 1516, 1519
Psp6I CCWGG 4 cut(s) 105, 438, 893, 1548
PspFI CCCAGC 1 cut(s) 248
PspGI CCWGG 4 cut(s) 105, 438, 893, 1548
PspN4I GGNNCC 8 cut(s) 330, 444, 524, 899, 1193, 1244, 1325, 1484
PspPI GGNCC 5 cut(s) 100, 522, 822, 1192, 1243
PstNI CAGNNNCTG 1 cut(s) 571
PsuI RGATCY 1 cut(s) 1482
RsaI GTAC 2 cut(s) 11, 782
RsaNI GTAC 2 cut(s) 10, 781
RseI CAYNNNNRTG 2 cut(s) 266, 1209
SaqAI TTAA 4 cut(s) 75, 477, 1065, 1343
SatI GCNGC 4 cut(s) 925, 1018, 1515, 1518
Sau96I GGNCC 5 cut(s) 100, 522, 822, 1192, 1243
ScrFI CCNGG 4 cut(s) 107, 440, 895, 1550
SduI GDGCHC 3 cut(s) 801, 818, 1547
SfaNI GCATC 2 cut(s) 880, 1501
SinI GGWCC 2 cut(s) 822, 1192
SmiMI CAYNNNNRTG 2 cut(s) 266, 1209
SmlI CTYRAG 1 cut(s) 1388
SmoI CTYRAG 1 cut(s) 1388
Sse9I AATT 9 cut(s) 88, 159, 184, 421, 636, 682, 1416, 1471, 1477
SseBI AGGCCT 2 cut(s) 220, 920
SsiI CCGC 4 cut(s) 830, 1136, 1487, 1517
SspMI CTAG 5 cut(s) 111, 197, 216, 1026, 1113
StuI AGGCCT 2 cut(s) 220, 920
StyD4I CCNGG 4 cut(s) 105, 438, 893, 1548
StyI CCWWGG 2 cut(s) 818, 1270
TaaI ACNGT 2 cut(s) 550, 1409
TaqI TCGA 2 cut(s) 306, 875
TasI AATT 9 cut(s) 88, 159, 184, 421, 636, 682, 1416, 1471, 1477
TatI WGTACW 1 cut(s) 780
TauI GCSGC 1 cut(s) 1520
TfiI GAWTC 3 cut(s) 143, 643, 907
Tru1I TTAA 4 cut(s) 75, 477, 1065, 1343
Tru9I TTAA 4 cut(s) 75, 477, 1065, 1343
TscAI CASTG 5 cut(s) 19, 122, 806, 1296, 1412
TseFI GTSAC 1 cut(s) 1399
TseI GCWGC 3 cut(s) 924, 1017, 1514
Tsp45I GTSAC 1 cut(s) 1399
TspDTI ATGAA 5 cut(s) 213, 284, 1083, 1134, 1451
TspRI CASTG 5 cut(s) 19, 122, 806, 1296, 1412
VpaK11BI GGWCC 2 cut(s) 822, 1192
XagI CCTNNNNNAGG 1 cut(s) 373
XapI RAATTY 3 cut(s) 159, 682, 1416
XcmI CCANNNNNNNNNTGG 2 cut(s) 533, 1253
XmiI GTMKAC 1 cut(s) 39
XmnI GAANNNNTTC 1 cut(s) 731
XspI CTAG 5 cut(s) 111, 197, 216, 1026, 1113
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.