Rmu_sc0001685.1_g000050

ribonuclease H protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001685.1
OG0000194
Physical Location & Seq
Forward (+)
275735 .. 277449
1715 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001685.1_g000050.1.cds

Sequence Viewer

Length: 1392 bp
atggcagtccccacttatcctatgacgtgcttcaagttccctaaaggcatctgcgatgatattaactctgcccttggtaactttttgtggggttataatgaaaatggcaacaagattcactggaatagttgggaacacttgggcaagtctaacgacatgggaggcttagggttcagggacctccaccatttcagcctagccctccttaccaagcaggcctggcgccttatacaacagcctaattccctatggactcgtgtgactaaagctaggtactatctaaattgtgacttcatcaaggctgaaaaaggataccgggcttcatggggttggtcgaatcttttggaagcaagggacatagctctaaaaggctcttgctggcaagtcatcagtggctcatccatcaatatatggactgattactggattcctcctcctaattttggtctggtacatactattgatgctatccctagtaatgctccaactcgagttgttgaaattattgatccggacacccggacgtggactccagaccaaattctccacatcttattaccctctgaggtcgaaaagatattgtctgttcctataggcaggggggatggagatgacaagctggtttggccatggaacaagtgtggagattacactgtcaagtcagcgtatcatttgatccataaccagcagaaaacctcccctatcacccataaaagtggaacctcccactctgtggatagtaggtgctggaagttattgtggaaaattgcttctctaccaaaaatcaagatatttctatggaaagtcctaaatggagctatcccctatttccttaatctctacaagcgactaaggattgataaacaacaggttactacttttgacaaatggctcttactcatttctaattctcatcacaacagcaaggaaaggaagtgggtgtttacttggatcaactttctagcttgggcaatatggaaggctagttgcggtgttatcggaggagcaactgcattttcccagaactgtttcgtagaagctgtagaagccaatgcaatccttctagggatcaatttagccaccgatctcaatctaagaaagattcaaattcaatctgactctcttgagattatcactgagttaaaatctaatcataaacgcaagaattggaagattacccagatcatcgattatatcaagtggagaagcaagttctttgatcatgtctcttgggaatggattctccgtgaagcaaatcaggtagcccatacggcaaccttgcttggacatcggtcggtgggtcttaacaaatgggccagcaagccaccaccgtccctcacccttgtgctccgaaatgatggtcttccatgccctacagctgctgtgaattaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RVT_1 RVT_3 zf-CCHC_4 zf-RVT

Protein Analysis

463

Amino Acids

53.06

Weight (kDa)

9.41

Isoelectric Point (pI)

29.83

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000194)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G34320 AT4G29090 AT5G42965
fragaria_vesca FvH4_1g19471 FvH4_1g29471 FvH4_1g29601 FvH4_2g04611 FvH4_2g05763 FvH4_2g11451 FvH4_2g11841 FvH4_3g10391 FvH4_3g21491 FvH4_3g21492 FvH4_3g32111 FvH4_3g35051 FvH4_4g06793 FvH4_5g08844 FvH4_5g15942 FvH4_5g18751 FvH4_5g27367 FvH4_6g11612 FvH4_6g20242 FvH4_6g27671 FvH4_6g31921 FvH4_7g32463
malus_domestica MD06G1107000.v1.1 MD07G1135800.v1.1 MD08G1205700.v1.1
prunus_persica Prupe.1G202000_v2.0.a1 Prupe.2G049100_v2.0.a1 Prupe.2G060500_v2.0.a1 Prupe.3G120300_v2.0.a1 Prupe.3G135000_v2.0.a1 Prupe.6G087800_v2.0.a1 Prupe.6G158500_v2.0.a1 Prupe.6G353900_v2.0.a1 Prupe.7G008600_v2.0.a1 Prupe.8G090500_v2.0.a1
pyrus_communis pycom01g21690 pycom02g19910 pycom04g18080 pycom07g08600 pycom07g18710 pycom07g26560 pycom08g03130 pycom08g13950 pycom09g06380 pycom10g13390 pycom10g22280 pycom11g04440 pycom11g10940 pycom12g04710 pycom13g08790 pycom15g31740 pycom17g14740 pycom17g24980
rosa_chinensis RchiOBHm_Chr1g0327801 RchiOBHm_Chr1g0347181 RchiOBHm_Chr1g0348821 RchiOBHm_Chr2g0157831 RchiOBHm_Chr5g0040851 RchiOBHm_Chr6g0249781 RchiOBHm_Chr7g0208461 RchiOBHm_Chr7g0210911 RchiOBHm_Chr7g0219141
rosa_laevigata RLG00000034326
rosa_multiflora Rmu_co8140276.1_g000001 Rmu_co8282095.1_g000001 Rmu_co8303311.1_g000001 Rmu_co8314215.1_g000001 Rmu_co8345435.1_g000001 Rmu_co8461745.1_g000001 Rmu_sc0000315.1_g000040 Rmu_sc0000487.1_g000014 Rmu_sc0000690.1_g000002 Rmu_sc0000808.1_g000001 Rmu_sc0000938.1_g000009 Rmu_sc0001260.1_g000002 Rmu_sc0001534.1_g000008 Rmu_sc0001669.1_g000003 Rmu_sc0001685.1_g000050 Rmu_sc0001838.1_g000007 Rmu_sc0002193.1_g000025 Rmu_sc0002308.1_g000058 Rmu_sc0002322.1_g000018 Rmu_sc0002529.1_g000008 Rmu_sc0002531.1_g000043 Rmu_sc0002754.1_g000022 Rmu_sc0002902.1_g000055 Rmu_sc0003627.1_g000005 Rmu_sc0003743.1_g000003 Rmu_sc0003765.1_g000016 Rmu_sc0003941.1_g000020 Rmu_sc0004038.1_g000011 Rmu_sc0004329.1_g000010 Rmu_sc0004476.1_g000002 Rmu_sc0004904.1_g000022 Rmu_sc0004988.1_g000017 Rmu_sc0005217.1_g000006 Rmu_sc0005257.1_g000010 Rmu_sc0005285.1_g000008 Rmu_sc0005687.1_g000001 Rmu_sc0006380.1_g000020 Rmu_sc0006922.1_g000004 Rmu_sc0007398.1_g000007 Rmu_sc0008279.1_g000019 Rmu_sc0009139.1_g000004 Rmu_sc0009158.1_g000001 Rmu_sc0010099.1_g000002 Rmu_sc0019043.1_g000001 Rmu_sc0022037.1_g000001 Rmu_sc0023291.1_g000001 Rmu_sc0031928.1_g000001 Rmu_sc0034436.1_g000002 Rmu_ssc0000126.1_g000001 Rmu_ssc0000151.1_g000016 Rmu_ssc0000152.1_g000009 Rmu_ssc0000395.1_g000031
rosa_roxburghii Rroxscaffold_1G00056570 Rroxscaffold_1G00058460 Rroxscaffold_2G00106120 Rroxscaffold_2G00106260 Rroxscaffold_6G00399080
rosa_rugosa Rorug02G0173300 Rorug02G0225600 Rorug03G0083300 Rorug03G0104900 Rorug04G0256500 Rorug05G0342600 Rorug06G0006200 Rorug06G0095200 Rorug06G0095600 Rorug06G0111500 Rorug07G0001200 Rorug07G0183100 Rorug07G0183100 Rorug07G0209000
rosa_samantha Rh2DG065400 Rh3DG315900 Rh4AG106100 Rh4BG362100 Rh4CG030200 Rh4DG239000 Rh4DG294000 Rh6DG304800 Rh7DG149500
rosa_wichuraiana Rw1G018070 Rw1G021220 Rw1G021820 Rw1G026430 Rw2G050800 Rw3G023330 Rw6G010050 Rw6G010440 Rw7G031930 Rw7G033860

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 96
AccB1I GGYRCC 1 cut(s) 222
AccB7I CCANNNNNTGG 1 cut(s) 733
AccIII TCCGGA 1 cut(s) 511
AciI CCGC 1 cut(s) 990
AclWI GGATC 4 cut(s) 503, 670, 959, 1076
AcoI YGGCCR 1 cut(s) 626
AcsI RAATTY 2 cut(s) 540, 1107
AcyI GRCGYC 1 cut(s) 223
AdeI CACNNNGTG 1 cut(s) 733
AfaI GTAC 2 cut(s) 275, 453
AfiI CCNNNNNNNGG 3 cut(s) 443, 525, 733
AgsI TTSAA 4 cut(s) 34, 500, 1106, 1112
AjiI CACGTC 2 cut(s) 27, 525
AjnI CCWGG 1 cut(s) 218
AleI CACNNNNGTG 1 cut(s) 1343
AluBI AGCT 7 cut(s) 269, 362, 619, 818, 965, 1040, 1379
AluI AGCT 7 cut(s) 269, 362, 619, 818, 965, 1040, 1379
Alw21I GWGCWC 1 cut(s) 1350
Alw26I GTCTC 1 cut(s) 1231
AlwI GGATC 4 cut(s) 503, 670, 959, 1076
AlwNI CAGNNNCTG 1 cut(s) 1382
Ama87I CYCGRG 1 cut(s) 489
Aor13HI TCCGGA 1 cut(s) 511
AoxI GGCC 3 cut(s) 216, 626, 1314
ApeKI GCWGC 1 cut(s) 1379
ApoI RAATTY 2 cut(s) 540, 1107
ArsI GACNNNNNNTTYG 2 cut(s) 1345, 1377
Asp700I GAANNNNTTC 2 cut(s) 1028, 1239
AspLEI GCGC 1 cut(s) 225
AspS9I GGNCC 2 cut(s) 178, 1314
AsuC2I CCSGG 2 cut(s) 317, 520
AsuHPI GGTGA 2 cut(s) 697, 1330
AvaI CYCGRG 1 cut(s) 489
AvaII GGWCC 1 cut(s) 178
BalI TGGCCA 1 cut(s) 628
BanI GGYRCC 1 cut(s) 222
BauI CACGAG 1 cut(s) 255
BbsI GAAGAC 1 cut(s) 1355
Bbv12I GWGCWC 1 cut(s) 1350
BbvI GCAGC 1 cut(s) 1366
BccI CCATC 3 cut(s) 410, 599, 1352
BceAI ACGGC 1 cut(s) 1287
BciT130I CCWGG 1 cut(s) 220
BciVI GTATCC 1 cut(s) 305
BclI TGATCA 1 cut(s) 1219
BcnI CCSGG 2 cut(s) 317, 520
BcoDI GTCTC 1 cut(s) 1231
BfaI CTAG 6 cut(s) 197, 270, 474, 962, 984, 1064
BfmI CTRYAG 3 cut(s) 591, 1041, 1374
BfoI RGCGCY 1 cut(s) 226
BfuI GTATCC 1 cut(s) 305
BglI GCCNNNNNGGC 1 cut(s) 1271
BisI GCNGC 1 cut(s) 1380
BlsI GCNGC 1 cut(s) 1381
Bme1390I CCNGG 3 cut(s) 220, 317, 520
Bme18I GGWCC 1 cut(s) 178
BmeT110I CYCGRG 1 cut(s) 489
BmgBI CACGTC 2 cut(s) 27, 525
BmgT120I GGNCC 2 cut(s) 178, 1314
BmiI GGNNCC 3 cut(s) 179, 224, 721
BmrFI CCNGG 3 cut(s) 220, 317, 520
BmsI GCATC 2 cut(s) 57, 454
BoxI GACNNNNGTC 1 cut(s) 1291
BpiI GAAGAC 1 cut(s) 1355
BpmI CTGGAG 1 cut(s) 516
Bpu10I CCTNAGC 1 cut(s) 166
BpuEI CTTGAG 1 cut(s) 1145
BpuMI CCSGG 2 cut(s) 317, 520
Bsa29I ATCGAT 1 cut(s) 1188
BsaBI GATNNNNATC 1 cut(s) 1089
BsaHI GRCGYC 1 cut(s) 223
BsaJI CCNNGG 2 cut(s) 73, 629
BsaWI WCCGGW 1 cut(s) 511
BsaXI ACNNNNNCTCC 2 cut(s) 514, 544
Bsc4I CCNNNNNNNGG 3 cut(s) 443, 525, 733
Bse1I ACTGG 2 cut(s) 125, 428
Bse8I GATNNNNATC 1 cut(s) 1089
BseAI TCCGGA 1 cut(s) 511
BseBI CCWGG 1 cut(s) 220
BseCI ATCGAT 1 cut(s) 1188
BseDI CCNNGG 2 cut(s) 73, 629
BseGI GGATG 2 cut(s) 398, 610
BseJI GATNNNNATC 1 cut(s) 1089
BseLI CCNNNNNNNGG 3 cut(s) 443, 525, 733
BseMII CTCAG 2 cut(s) 555, 1128
BseNI ACTGG 2 cut(s) 125, 428
BseRI GAGGAG 2 cut(s) 423, 1017
BseXI GCAGC 1 cut(s) 1366
Bsh1285I CGRYCG 1 cut(s) 1295
BshFI GGCC 3 cut(s) 218, 628, 1316
BshNI GGYRCC 1 cut(s) 222
BshVI ATCGAT 1 cut(s) 1188
BsiEI CGRYCG 1 cut(s) 1295
BsiHKAI GWGCWC 1 cut(s) 1350
BsiHKCI CYCGRG 1 cut(s) 489
BsiSI CCGG 3 cut(s) 316, 512, 520
BslFI GGGAC 3 cut(s) 191, 368, 1318
BslI CCNNNNNNNGG 3 cut(s) 443, 525, 733
BsmAI GTCTC 1 cut(s) 1231
BsmFI GGGAC 3 cut(s) 191, 368, 1318
BsnI GGCC 3 cut(s) 218, 628, 1316
BsoBI CYCGRG 1 cut(s) 489
Bsp1286I GDGCHC 1 cut(s) 1350
Bsp13I TCCGGA 1 cut(s) 511
Bsp143I GATC 7 cut(s) 508, 675, 951, 1068, 1084, 1182, 1219
Bsp19I CCATGG 1 cut(s) 629
BspACI CCGC 1 cut(s) 990
BspANI GGCC 3 cut(s) 218, 628, 1316
BspCNI CTCAG 2 cut(s) 556, 1129
BspDI ATCGAT 1 cut(s) 1188
BspEI TCCGGA 1 cut(s) 511
BspLI GGNNCC 3 cut(s) 179, 224, 721
BspPI GGATC 4 cut(s) 503, 670, 959, 1076
BspT107I GGYRCC 1 cut(s) 222
BsrI ACTGG 2 cut(s) 125, 428
BssECI CCNNGG 2 cut(s) 73, 629
BssMI GATC 7 cut(s) 508, 675, 951, 1068, 1084, 1182, 1219
BssNI GRCGYC 1 cut(s) 223
BssSI CACGAG 1 cut(s) 255
BssT1I CCWWGG 2 cut(s) 73, 629
Bst2BI CACGAG 1 cut(s) 255
Bst2UI CCWGG 1 cut(s) 220
Bst4CI ACNGT 3 cut(s) 655, 1028, 1332
BstACI GRCGYC 1 cut(s) 223
BstC8I GCNNGC 4 cut(s) 216, 380, 1318, 1322
BstDEI CTNAG 5 cut(s) 166, 564, 851, 1094, 1137
BstDSI CCRYGG 1 cut(s) 629
BstF5I GGATG 2 cut(s) 398, 610
BstH2I RGCGCY 1 cut(s) 226
BstHHI GCGC 1 cut(s) 225
BstKTI GATC 7 cut(s) 511, 678, 954, 1071, 1087, 1185, 1222
BstMAI GTCTC 1 cut(s) 1231
BstMBI GATC 7 cut(s) 508, 675, 951, 1068, 1084, 1182, 1219
BstMCI CGRYCG 1 cut(s) 1295
BstMWI GCNNNNNNNGC 4 cut(s) 220, 625, 1046, 1271
BstNI CCWGG 1 cut(s) 220
BstPAI GACNNNNGTC 1 cut(s) 1291
BstSCI CCNGG 3 cut(s) 218, 315, 518
BstSFI CTRYAG 3 cut(s) 591, 1041, 1374
BstV1I GCAGC 1 cut(s) 1366
BstV2I GAAGAC 1 cut(s) 1355
BstXI CCANNNNNNTGG 1 cut(s) 716
Bsu15I ATCGAT 1 cut(s) 1188
BsuI GTATCC 1 cut(s) 305
BsuRI GGCC 3 cut(s) 218, 628, 1316
BsuTUI ATCGAT 1 cut(s) 1188
BtgI CCRYGG 1 cut(s) 629
BtgZI GCGATG 1 cut(s) 69
BtrI CACGTC 2 cut(s) 27, 525
BtsCI GGATG 2 cut(s) 398, 610
BtsIMutI CAGTG 4 cut(s) 118, 397, 651, 1134
Cac8I GCNNGC 4 cut(s) 216, 380, 1318, 1322
CaiI CAGNNNCTG 1 cut(s) 1382
CfoI GCGC 1 cut(s) 225
Cfr13I GGNCC 2 cut(s) 178, 1314
ClaI ATCGAT 1 cut(s) 1188
Csp6I GTAC 2 cut(s) 274, 452
CviAII CATG 5 cut(s) 157, 324, 630, 1223, 1368
CviQI GTAC 2 cut(s) 274, 452
DdeI CTNAG 5 cut(s) 166, 564, 851, 1094, 1137
DinI GGCGCC 1 cut(s) 224
DpnI GATC 7 cut(s) 510, 677, 953, 1070, 1086, 1184, 1221
DpnII GATC 7 cut(s) 508, 675, 951, 1068, 1084, 1182, 1219
DraIII CACNNNGTG 1 cut(s) 733
EaeI YGGCCR 1 cut(s) 626
Eco130I CCWWGG 2 cut(s) 73, 629
Eco147I AGGCCT 1 cut(s) 218
Eco47I GGWCC 1 cut(s) 178
Eco88I CYCGRG 1 cut(s) 489
EcoO109I RGGNCCY 1 cut(s) 178
EcoRII CCWGG 1 cut(s) 218
EcoT14I CCWWGG 2 cut(s) 73, 629
EgeI GGCGCC 1 cut(s) 224
EheI GGCGCC 1 cut(s) 224
ErhI CCWWGG 2 cut(s) 73, 629
FaeI CATG 5 cut(s) 160, 327, 633, 1226, 1371
FaqI GGGAC 3 cut(s) 191, 368, 1318
FatI CATG 5 cut(s) 156, 323, 629, 1222, 1367
FbaI TGATCA 1 cut(s) 1219
Fnu4HI GCNGC 1 cut(s) 1380
FokI GGATG 2 cut(s) 385, 617
Fsp4HI GCNGC 1 cut(s) 1380
FspBI CTAG 6 cut(s) 197, 270, 474, 962, 984, 1064
GlaI GCGC 1 cut(s) 224
GluI GCNGC 1 cut(s) 1380
GsuI CTGGAG 1 cut(s) 516
HaeII RGCGCY 1 cut(s) 226
HaeIII GGCC 3 cut(s) 218, 628, 1316
HapII CCGG 3 cut(s) 316, 512, 520
HhaI GCGC 1 cut(s) 225
Hin1I GRCGYC 1 cut(s) 223
Hin1II CATG 5 cut(s) 160, 327, 633, 1226, 1371
Hin6I GCGC 1 cut(s) 223
HinP1I GCGC 1 cut(s) 223
HinfI GANTC 8 cut(s) 115, 253, 337, 427, 529, 1102, 1118, 1240
HpaII CCGG 3 cut(s) 316, 512, 520
HphI GGTGA 2 cut(s) 697, 1330
Hpy166II GTNNAC 2 cut(s) 528, 945
Hpy188I TCNGA 4 cut(s) 565, 1001, 1117, 1352
Hpy188III TCNNGA 4 cut(s) 512, 533, 787, 1124
Hpy8I GTNNAC 2 cut(s) 528, 945
HpyAV CCTTC 2 cut(s) 973, 1070
HpyCH4III ACNGT 3 cut(s) 655, 1028, 1332
HpyCH4IV ACGT 2 cut(s) 26, 524
HpyCH4V TGCA 2 cut(s) 1013, 1055
HpyF10VI GCNNNNNNNGC 4 cut(s) 220, 625, 1046, 1271
HpyF3I CTNAG 5 cut(s) 166, 564, 851, 1094, 1137
HpySE526I ACGT 2 cut(s) 26, 524
Hsp92I GRCGYC 1 cut(s) 223
Hsp92II CATG 5 cut(s) 160, 327, 633, 1226, 1371
HspAI GCGC 1 cut(s) 223
KasI GGCGCC 1 cut(s) 222
Kpn2I TCCGGA 1 cut(s) 511
Ksp22I TGATCA 1 cut(s) 1219
Kzo9I GATC 7 cut(s) 508, 675, 951, 1068, 1084, 1182, 1219
LmnI GCTCC 4 cut(s) 487, 815, 1004, 1353
Lsp1109I GCAGC 1 cut(s) 1366
LweI GCATC 2 cut(s) 57, 454
MaeI CTAG 6 cut(s) 197, 270, 474, 962, 984, 1064
MaeII ACGT 2 cut(s) 26, 524
MaeIII GTNAC 4 cut(s) 77, 259, 287, 871
MalI GATC 7 cut(s) 510, 677, 953, 1070, 1086, 1184, 1221
MboI GATC 7 cut(s) 508, 675, 951, 1068, 1084, 1182, 1219
MboII GAAGA 2 cut(s) 1183, 1355
MhlI GDGCHC 1 cut(s) 1350
MlsI TGGCCA 1 cut(s) 628
MluNI TGGCCA 1 cut(s) 628
Mly113I GGCGCC 1 cut(s) 223
MlyI GAGTC 3 cut(s) 247, 523, 1112
MmeI TCCRAC 1 cut(s) 509
Mox20I TGGCCA 1 cut(s) 628
MroI TCCGGA 1 cut(s) 511
MroXI GAANNNNTTC 2 cut(s) 1028, 1239
MscI TGGCCA 1 cut(s) 628
MseI TTAA 5 cut(s) 63, 834, 1142, 1305, 1390
MslI CAYNNNNRTG 2 cut(s) 714, 1343
Msp20I TGGCCA 1 cut(s) 628
MspA1I CMGCKG 1 cut(s) 1379
MspI CCGG 3 cut(s) 316, 512, 520
MspR9I CCNGG 3 cut(s) 220, 317, 520
MvaI CCWGG 1 cut(s) 220
MwoI GCNNNNNNNGC 4 cut(s) 220, 625, 1046, 1271
NarI GGCGCC 1 cut(s) 223
NciI CCSGG 2 cut(s) 317, 520
NcoI CCATGG 1 cut(s) 629
NdeII GATC 7 cut(s) 508, 675, 951, 1068, 1084, 1182, 1219
NlaIII CATG 5 cut(s) 160, 327, 633, 1226, 1371
NlaIV GGNNCC 3 cut(s) 179, 224, 721
NmuCI GTSAC 2 cut(s) 259, 287
OliI CACNNNNGTG 1 cut(s) 1343
PaeR7I CTCGAG 1 cut(s) 489
PceI AGGCCT 1 cut(s) 218
PdmI GAANNNNTTC 2 cut(s) 1028, 1239
PfeI GAWTC 5 cut(s) 115, 337, 427, 1102, 1240
PflMI CCANNNNNTGG 1 cut(s) 733
PkrI GCNGC 1 cut(s) 1381
PleI GAGTC 3 cut(s) 247, 523, 1112
PluTI GGCGCC 1 cut(s) 226
PpsI GAGTC 3 cut(s) 247, 523, 1112
PpuMI RGGWCCY 1 cut(s) 178
PshAI GACNNNNGTC 1 cut(s) 1291
PsiI TTATAA 1 cut(s) 96
Psp5II RGGWCCY 1 cut(s) 178
Psp6I CCWGG 1 cut(s) 218
PspGI CCWGG 1 cut(s) 218
PspN4I GGNNCC 3 cut(s) 179, 224, 721
PspPI GGNCC 2 cut(s) 178, 1314
PspPPI RGGWCCY 1 cut(s) 178
PspXI VCTCGAGB 1 cut(s) 489
PstNI CAGNNNCTG 1 cut(s) 1382
PvuII CAGCTG 1 cut(s) 1379
RsaI GTAC 2 cut(s) 275, 453
RsaNI GTAC 2 cut(s) 274, 452
RseI CAYNNNNRTG 2 cut(s) 714, 1343
SaqAI TTAA 5 cut(s) 63, 834, 1142, 1305, 1390
SatI GCNGC 1 cut(s) 1380
Sau3AI GATC 7 cut(s) 508, 675, 951, 1068, 1084, 1182, 1219
Sau96I GGNCC 2 cut(s) 178, 1314
SchI GAGTC 3 cut(s) 247, 523, 1112
ScrFI CCNGG 3 cut(s) 220, 317, 520
SduI GDGCHC 1 cut(s) 1350
SfaNI GCATC 2 cut(s) 57, 454
SfcI CTRYAG 3 cut(s) 591, 1041, 1374
SfoI GGCGCC 1 cut(s) 224
Sfr274I CTCGAG 1 cut(s) 489
SinI GGWCC 1 cut(s) 178
SlaI CTCGAG 1 cut(s) 489
SmiMI CAYNNNNRTG 2 cut(s) 714, 1343
SmlI CTYRAG 2 cut(s) 489, 1124
SmoI CTYRAG 2 cut(s) 489, 1124
SseBI AGGCCT 1 cut(s) 218
SsiI CCGC 1 cut(s) 990
SspDI GGCGCC 1 cut(s) 222
SspMI CTAG 6 cut(s) 197, 270, 474, 962, 984, 1064
StuI AGGCCT 1 cut(s) 218
StyD4I CCNGG 3 cut(s) 218, 315, 518
StyI CCWWGG 2 cut(s) 73, 629
TaaI ACNGT 3 cut(s) 655, 1028, 1332
TaiI ACGT 2 cut(s) 29, 527
TaqI TCGA 4 cut(s) 335, 490, 570, 1188
TaqII GACCGA 1 cut(s) 1281
TfiI GAWTC 5 cut(s) 115, 337, 427, 1102, 1240
Tru1I TTAA 5 cut(s) 63, 834, 1142, 1305, 1390
Tru9I TTAA 5 cut(s) 63, 834, 1142, 1305, 1390
TscAI CASTG 4 cut(s) 125, 397, 658, 1141
TseFI GTSAC 2 cut(s) 259, 287
TseI GCWGC 1 cut(s) 1379
Tsp45I GTSAC 2 cut(s) 259, 287
TspDTI ATGAA 3 cut(s) 114, 283, 312
TspGWI ACGGA 1 cut(s) 1235
TspRI CASTG 4 cut(s) 125, 397, 658, 1141
Van91I CCANNNNNTGG 1 cut(s) 733
VpaK11BI GGWCC 1 cut(s) 178
XapI RAATTY 2 cut(s) 540, 1107
XhoI CTCGAG 1 cut(s) 489
XmnI GAANNNNTTC 2 cut(s) 1028, 1239
XspI CTAG 6 cut(s) 197, 270, 474, 962, 984, 1064
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.