Rmu_sc0001838.1_g000007

ribonuclease H protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001838.1
OG0000194
Physical Location & Seq
Forward (+)
35473 .. 38995
3523 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001838.1_g000007.1.cds

Sequence Viewer

Length: 1854 bp
atgttaatagaagatgctcttactggaagggattctatttcaagtggttcatcaagtgatttgggttatcaacagttgtgcttggaagtgtttttttcaaagaacaatatgtacaacgcctatcttcagaagttgatcacctattcacctgcttcttactcacccccttgccagagacaaggtcaaagaatcaaagaattaaaggagagggctatgagcgtgcttagtccatactgcctggttgggttacatgagctttcgcatgatagtaaccaaactgcacaagcctctgaaagtggtcctctaccattggtctctcttttggagtttgtgagtggaatttatcgggtacttaaagggggagtgaggtataaaaagctgcaagcttcagggcagtccgttaattttgagaaatcctctttgttcttcacctccaatacaccggtggatcttcaatctcaaataggcaatattttcaacatccctgcttctgattctccaggtaagtatcttggattaccaactcactggggtcgttccaaaaaagatgcacttgcttatgttagagacagaattaatgcaaaattggatggttggaaatctgagtgtctcacacaagcggggaaggaaattctcataaaagcagtggctaccgcaatcccagcctatcctatgtcttgttttcggatgccagttactttatgcagagctattaactctgacattgccaagttctggtggggacagaatgagaattcagaaaaaatacactggcatacatggttgaaactctgcaaacctaaatgtgaaggggggcttggcttcagagatttggaaacttttaatttggctttactcgcgaaacaatgttggaggatacataacaaccctactgctctctgggttagaattctcaaagcaagatacttcaattattgcagcttctttcaagcaaaagtgggatcgagatcatcatgggcttggagtagcatcttggctggaagagaaataatttcctcagaaacacgttggcaagtgaataatggtaaagtaattcaagtttgggaggatagatggatcccaaatatccctgatggcagattgcatccatttccaacaaataacagatttacacctcttgctgtaaatgagttatttgatgaagaaaaccaattgtgggtgattgatcacattgaacctttcatcgctgtctctgaagctacagtaatcaaatccatccatactggtgatgttaatgttgatgatagattgatatggcctgctgaaaaatcaggtaattacactgtgaaatcgggttatcatcttatgcataatccttctatttcagttcctaaagcttcttcctcccatgtgattaataagaaagtttggagttttatctggggcattgacacattaccaaagattaagcacttcttatggagagcggtatccaactctttgcccactggtctaaatctttttaaaaggaagcttctgagatctcctatttgcaacctttgtgaagttggtgatgaaagtattgaacattgcatcttactctgcccttggacaaagtgcacatggtttggtagtatattggctctacatatacccaaacaaaacatcaccacccttgatgtttggttactagctcttgccaatatgcctgctcctccaaatcatacaaagaatgagttaatttctttgctcagtttcttcatctgggaaatttggaaagctaggtgtgcatttgtctttaaccacatccctccctctccttgtgatatcatacatactgccacaagacattggatggaatttcagattgctaaacgttcagccaagaaatag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4283 RVT_1 RVT_3 zf-CCHC_4 zf-RVT

Protein Analysis

617

Amino Acids

70.1

Weight (kDa)

9.15

Isoelectric Point (pI)

50.45

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000194)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G34320 AT4G29090 AT5G42965
fragaria_vesca FvH4_1g19471 FvH4_1g29471 FvH4_1g29601 FvH4_2g04611 FvH4_2g05763 FvH4_2g11451 FvH4_2g11841 FvH4_3g10391 FvH4_3g21491 FvH4_3g21492 FvH4_3g32111 FvH4_3g35051 FvH4_4g06793 FvH4_5g08844 FvH4_5g15942 FvH4_5g18751 FvH4_5g27367 FvH4_6g11612 FvH4_6g20242 FvH4_6g27671 FvH4_6g31921 FvH4_7g32463
malus_domestica MD06G1107000.v1.1 MD07G1135800.v1.1 MD08G1205700.v1.1
prunus_persica Prupe.1G202000_v2.0.a1 Prupe.2G049100_v2.0.a1 Prupe.2G060500_v2.0.a1 Prupe.3G120300_v2.0.a1 Prupe.3G135000_v2.0.a1 Prupe.6G087800_v2.0.a1 Prupe.6G158500_v2.0.a1 Prupe.6G353900_v2.0.a1 Prupe.7G008600_v2.0.a1 Prupe.8G090500_v2.0.a1
pyrus_communis pycom01g21690 pycom02g19910 pycom04g18080 pycom07g08600 pycom07g18710 pycom07g26560 pycom08g03130 pycom08g13950 pycom09g06380 pycom10g13390 pycom10g22280 pycom11g04440 pycom11g10940 pycom12g04710 pycom13g08790 pycom15g31740 pycom17g14740 pycom17g24980
rosa_chinensis RchiOBHm_Chr1g0327801 RchiOBHm_Chr1g0347181 RchiOBHm_Chr1g0348821 RchiOBHm_Chr2g0157831 RchiOBHm_Chr5g0040851 RchiOBHm_Chr6g0249781 RchiOBHm_Chr7g0208461 RchiOBHm_Chr7g0210911 RchiOBHm_Chr7g0219141
rosa_laevigata RLG00000034326
rosa_multiflora Rmu_co8140276.1_g000001 Rmu_co8282095.1_g000001 Rmu_co8303311.1_g000001 Rmu_co8314215.1_g000001 Rmu_co8345435.1_g000001 Rmu_co8461745.1_g000001 Rmu_sc0000315.1_g000040 Rmu_sc0000487.1_g000014 Rmu_sc0000690.1_g000002 Rmu_sc0000808.1_g000001 Rmu_sc0000938.1_g000009 Rmu_sc0001260.1_g000002 Rmu_sc0001534.1_g000008 Rmu_sc0001669.1_g000003 Rmu_sc0001685.1_g000050 Rmu_sc0001838.1_g000007 Rmu_sc0002193.1_g000025 Rmu_sc0002308.1_g000058 Rmu_sc0002322.1_g000018 Rmu_sc0002529.1_g000008 Rmu_sc0002531.1_g000043 Rmu_sc0002754.1_g000022 Rmu_sc0002902.1_g000055 Rmu_sc0003627.1_g000005 Rmu_sc0003743.1_g000003 Rmu_sc0003765.1_g000016 Rmu_sc0003941.1_g000020 Rmu_sc0004038.1_g000011 Rmu_sc0004329.1_g000010 Rmu_sc0004476.1_g000002 Rmu_sc0004904.1_g000022 Rmu_sc0004988.1_g000017 Rmu_sc0005217.1_g000006 Rmu_sc0005257.1_g000010 Rmu_sc0005285.1_g000008 Rmu_sc0005687.1_g000001 Rmu_sc0006380.1_g000020 Rmu_sc0006922.1_g000004 Rmu_sc0007398.1_g000007 Rmu_sc0008279.1_g000019 Rmu_sc0009139.1_g000004 Rmu_sc0009158.1_g000001 Rmu_sc0010099.1_g000002 Rmu_sc0019043.1_g000001 Rmu_sc0022037.1_g000001 Rmu_sc0023291.1_g000001 Rmu_sc0031928.1_g000001 Rmu_sc0034436.1_g000002 Rmu_ssc0000126.1_g000001 Rmu_ssc0000151.1_g000016 Rmu_ssc0000152.1_g000009 Rmu_ssc0000395.1_g000031
rosa_roxburghii Rroxscaffold_1G00056570 Rroxscaffold_1G00058460 Rroxscaffold_2G00106120 Rroxscaffold_2G00106260 Rroxscaffold_6G00399080
rosa_rugosa Rorug02G0173300 Rorug02G0225600 Rorug03G0083300 Rorug03G0104900 Rorug04G0256500 Rorug05G0342600 Rorug06G0006200 Rorug06G0095200 Rorug06G0095600 Rorug06G0111500 Rorug07G0001200 Rorug07G0183100 Rorug07G0183100 Rorug07G0209000
rosa_samantha Rh2DG065400 Rh3DG315900 Rh4AG106100 Rh4BG362100 Rh4CG030200 Rh4DG239000 Rh4DG294000 Rh6DG304800 Rh7DG149500
rosa_wichuraiana Rw1G018070 Rw1G021220 Rw1G021820 Rw1G026430 Rw2G050800 Rw3G023330 Rw6G010050 Rw6G010440 Rw7G031930 Rw7G033860

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 157
Acc36I ACCTGC 1 cut(s) 157
AccB7I CCANNNNNTGG 1 cut(s) 735
AccBSI CCGCTC 1 cut(s) 1448
AccII CGCG 1 cut(s) 860
AciI CCGC 3 cut(s) 620, 654, 1448
AclI AACGTT 1 cut(s) 1837
AclWI GGATC 4 cut(s) 456, 970, 1072, 1085
AcsI RAATTY 6 cut(s) 339, 630, 754, 909, 1731, 1820
AcuI CTGAAG 4 cut(s) 110, 372, 808, 1236
AfaI GTAC 2 cut(s) 113, 351
AfiI CCNNNNNNNGG 2 cut(s) 735, 1177
AflIII ACRYGT 1 cut(s) 1025
AgeI ACCGGT 1 cut(s) 442
AjnI CCWGG 2 cut(s) 237, 499
AjuI GAANNNNNNNTTGG 2 cut(s) 801, 833
Alw21I GWGCWC 1 cut(s) 1583
Alw26I GTCTC 5 cut(s) 169, 319, 561, 614, 1216
Alw44I GTGCAC 1 cut(s) 1579
AlwI GGATC 4 cut(s) 456, 970, 1072, 1085
AoxI GGCC 1 cut(s) 1277
ApaLI GTGCAC 1 cut(s) 1579
ApeKI GCWGC 2 cut(s) 379, 939
ApoI RAATTY 6 cut(s) 339, 630, 754, 909, 1731, 1820
AseI ATTAAT 2 cut(s) 576, 1377
AsiGI ACCGGT 1 cut(s) 442
Asp700I GAANNNNTTC 1 cut(s) 31
AspS9I GGNCC 1 cut(s) 299
AsuHPI GGTGA 8 cut(s) 130, 138, 153, 421, 1192, 1259, 1544, 1621
AvaII GGWCC 1 cut(s) 299
BaeGI GKGCMC 1 cut(s) 1583
BamHI GGATCC 1 cut(s) 1077
Bbv12I GWGCWC 1 cut(s) 1583
BbvI GCAGC 2 cut(s) 366, 951
BccI CCATC 5 cut(s) 584, 1068, 1088, 1244, 1810
BciT130I CCWGG 2 cut(s) 239, 501
BciVI GTATCC 2 cut(s) 870, 1462
BclI TGATCA 2 cut(s) 135, 1186
BcoDI GTCTC 5 cut(s) 169, 319, 561, 614, 1216
BfaI CTAG 2 cut(s) 1652, 1743
BfmI CTRYAG 1 cut(s) 1221
BfuAI ACCTGC 1 cut(s) 157
BfuI GTATCC 2 cut(s) 870, 1462
BglII AGATCT 1 cut(s) 1502
BisI GCNGC 2 cut(s) 380, 940
BlsI GCNGC 2 cut(s) 381, 941
Bme1390I CCNGG 2 cut(s) 239, 501
Bme18I GGWCC 1 cut(s) 299
BmgT120I GGNCC 1 cut(s) 299
BmiI GGNNCC 1 cut(s) 1079
BmrFI CCNGG 2 cut(s) 239, 501
BmrI ACTGGG 1 cut(s) 538
BmsI GCATC 6 cut(s) 4, 538, 678, 999, 1114, 1563
BmuI ACTGGG 1 cut(s) 538
BplI GAGNNNNNCTC 2 cut(s) 401, 433
BpmI CTGGAG 1 cut(s) 483
BsaBI GATNNNNATC 1 cut(s) 967
BsaI GGTCTC 1 cut(s) 319
BsaJI CCNNGG 1 cut(s) 1568
BsaWI WCCGGW 1 cut(s) 442
Bsc4I CCNNNNNNNGG 2 cut(s) 735, 1177
Bse118I RCCGGY 1 cut(s) 442
Bse1I ACTGG 6 cut(s) 28, 533, 692, 776, 1249, 1474
Bse3DI GCAATG 2 cut(s) 723, 1549
Bse8I GATNNNNATC 1 cut(s) 967
BseBI CCWGG 2 cut(s) 239, 501
BseDI CCNNGG 1 cut(s) 1568
BseGI GGATG 7 cut(s) 480, 595, 693, 1105, 1236, 1767, 1821
BseJI GATNNNNATC 1 cut(s) 967
BseLI CCNNNNNNNGG 2 cut(s) 735, 1177
BseMI GCAATG 2 cut(s) 723, 1549
BseMII CTCAG 4 cut(s) 594, 1032, 1490, 1726
BseNI ACTGG 6 cut(s) 28, 533, 692, 776, 1249, 1474
BseRI GAGGAG 1 cut(s) 1665
BseSI GKGCMC 1 cut(s) 1583
BseXI GCAGC 2 cut(s) 366, 951
BseYI CCCAGC 1 cut(s) 661
BsgI GTGCAG 1 cut(s) 264
Bsh1236I CGCG 1 cut(s) 860
BshFI GGCC 1 cut(s) 1279
BshTI ACCGGT 1 cut(s) 442
BsiHKAI GWGCWC 1 cut(s) 1583
BsiSI CCGG 1 cut(s) 443
BslFI GGGAC 1 cut(s) 756
BslI CCNNNNNNNGG 2 cut(s) 735, 1177
BsmAI GTCTC 5 cut(s) 169, 319, 561, 614, 1216
BsmFI GGGAC 1 cut(s) 756
BsnI GGCC 1 cut(s) 1279
Bso31I GGTCTC 1 cut(s) 319
Bsp1286I GDGCHC 1 cut(s) 1583
Bsp1407I TGTACA 1 cut(s) 111
Bsp143I GATC 7 cut(s) 135, 448, 962, 968, 1077, 1186, 1502
Bsp68I TCGCGA 1 cut(s) 860
BspACI CCGC 3 cut(s) 620, 654, 1448
BspANI GGCC 1 cut(s) 1279
BspCNI CTCAG 4 cut(s) 595, 1031, 1491, 1725
BspFNI CGCG 1 cut(s) 860
BspLI GGNNCC 1 cut(s) 1079
BspMI ACCTGC 1 cut(s) 157
BspPI GGATC 4 cut(s) 456, 970, 1072, 1085
BspTNI GGTCTC 1 cut(s) 319
BsrBI CCGCTC 1 cut(s) 1448
BsrDI GCAATG 2 cut(s) 723, 1549
BsrFI RCCGGY 1 cut(s) 442
BsrGI TGTACA 1 cut(s) 111
BsrI ACTGG 6 cut(s) 28, 533, 692, 776, 1249, 1474
BssAI RCCGGY 1 cut(s) 442
BssECI CCNNGG 1 cut(s) 1568
BssMI GATC 7 cut(s) 135, 448, 962, 968, 1077, 1186, 1502
BssT1I CCWWGG 1 cut(s) 1568
Bst2UI CCWGG 2 cut(s) 239, 501
Bst4CI ACNGT 3 cut(s) 75, 1225, 1306
Bst6I CTCTTC 1 cut(s) 997
BstAUI TGTACA 1 cut(s) 111
BstC8I GCNNGC 4 cut(s) 221, 384, 1281, 1671
BstDEI CTNAG 5 cut(s) 224, 603, 1018, 1499, 1712
BstF5I GGATG 7 cut(s) 480, 595, 693, 1105, 1236, 1767, 1821
BstFNI CGCG 1 cut(s) 860
BstKTI GATC 7 cut(s) 138, 451, 965, 971, 1080, 1189, 1505
BstMAI GTCTC 5 cut(s) 169, 319, 561, 614, 1216
BstMBI GATC 7 cut(s) 135, 448, 962, 968, 1077, 1186, 1502
BstMWI GCNNNNNNNGC 3 cut(s) 662, 857, 1748
BstNI CCWGG 2 cut(s) 239, 501
BstSCI CCNGG 2 cut(s) 237, 499
BstSFI CTRYAG 1 cut(s) 1221
BstSLI GKGCMC 1 cut(s) 1583
BstUI CGCG 1 cut(s) 860
BstV1I GCAGC 2 cut(s) 366, 951
BstX2I RGATCY 3 cut(s) 448, 1077, 1502
BstXI CCANNNNNNTGG 1 cut(s) 528
BstYI RGATCY 3 cut(s) 448, 1077, 1502
BsuI GTATCC 2 cut(s) 870, 1462
BsuRI GGCC 1 cut(s) 1279
BtgZI GCGATG 1 cut(s) 1189
BtsCI GGATG 7 cut(s) 480, 595, 693, 1105, 1236, 1767, 1821
BtsI GCAGTG 1 cut(s) 651
BtsIMutI CAGTG 5 cut(s) 526, 651, 769, 1302, 1467
BtuMI TCGCGA 1 cut(s) 860
BveI ACCTGC 1 cut(s) 157
Cac8I GCNNGC 4 cut(s) 221, 384, 1281, 1671
Cfr10I RCCGGY 1 cut(s) 442
Cfr13I GGNCC 1 cut(s) 299
Csp6I GTAC 2 cut(s) 112, 350
CspAI ACCGGT 1 cut(s) 442
CviAII CATG 6 cut(s) 251, 263, 780, 975, 1370, 1584
CviQI GTAC 2 cut(s) 112, 350
DdeI CTNAG 5 cut(s) 224, 603, 1018, 1499, 1712
DpnI GATC 7 cut(s) 137, 450, 964, 970, 1079, 1188, 1504
DpnII GATC 7 cut(s) 135, 448, 962, 968, 1077, 1186, 1502
DraI TTTAAA 1 cut(s) 1486
Eam1104I CTCTTC 1 cut(s) 997
EarI CTCTTC 1 cut(s) 997
Eco130I CCWWGG 1 cut(s) 1568
Eco31I GGTCTC 1 cut(s) 319
Eco32I GATATC 1 cut(s) 1789
Eco47I GGWCC 1 cut(s) 299
Eco57I CTGAAG 4 cut(s) 110, 372, 808, 1236
EcoRI GAATTC 2 cut(s) 754, 909
EcoRII CCWGG 2 cut(s) 237, 499
EcoRV GATATC 1 cut(s) 1789
EcoT14I CCWWGG 1 cut(s) 1568
EcoT22I ATGCAT 1 cut(s) 1332
ErhI CCWWGG 1 cut(s) 1568
FaeI CATG 6 cut(s) 254, 266, 783, 978, 1373, 1587
FalI AAGNNNNNCTT 7 cut(s) 35, 537, 569, 801, 833, 1421, 1453
FaqI GGGAC 1 cut(s) 756
FatI CATG 6 cut(s) 250, 262, 779, 974, 1369, 1583
FauI CCCGC 1 cut(s) 613
FbaI TGATCA 2 cut(s) 135, 1186
Fnu4HI GCNGC 2 cut(s) 380, 940
FokI GGATG 7 cut(s) 467, 602, 700, 1092, 1223, 1754, 1828
Fsp4HI GCNGC 2 cut(s) 380, 940
FspBI CTAG 2 cut(s) 1652, 1743
GluI GCNGC 2 cut(s) 380, 940
GsaI CCCAGC 1 cut(s) 665
GsuI CTGGAG 1 cut(s) 483
HaeIII GGCC 1 cut(s) 1279
HapII CCGG 1 cut(s) 443
Hin1II CATG 6 cut(s) 254, 266, 783, 978, 1373, 1587
HindIII AAGCTT 3 cut(s) 384, 1356, 1493
HinfI GANTC 3 cut(s) 32, 189, 494
HpaII CCGG 1 cut(s) 443
HphI GGTGA 8 cut(s) 130, 138, 153, 421, 1192, 1259, 1544, 1621
Hpy166II GTNNAC 1 cut(s) 1581
Hpy188III TCNNGA 2 cut(s) 859, 966
Hpy8I GTNNAC 1 cut(s) 1581
HpyAV CCTTC 4 cut(s) 21, 619, 803, 1347
HpyCH4III ACNGT 3 cut(s) 75, 1225, 1306
HpyCH4IV ACGT 2 cut(s) 1027, 1837
HpyF10VI GCNNNNNNNGC 3 cut(s) 662, 857, 1748
HpyF3I CTNAG 5 cut(s) 224, 603, 1018, 1499, 1712
HpySE526I ACGT 2 cut(s) 1027, 1837
Hsp92II CATG 6 cut(s) 254, 266, 783, 978, 1373, 1587
Ksp22I TGATCA 2 cut(s) 135, 1186
Kzo9I GATC 7 cut(s) 135, 448, 962, 968, 1077, 1186, 1502
LmnI GCTCC 1 cut(s) 1678
Lsp1109I GCAGC 2 cut(s) 366, 951
LweI GCATC 6 cut(s) 4, 538, 678, 999, 1114, 1563
MaeI CTAG 2 cut(s) 1652, 1743
MaeII ACGT 2 cut(s) 1027, 1837
MaeIII GTNAC 4 cut(s) 246, 269, 694, 1647
MalI GATC 7 cut(s) 137, 450, 964, 970, 1079, 1188, 1504
MbiI CCGCTC 1 cut(s) 1448
MboI GATC 7 cut(s) 135, 448, 962, 968, 1077, 1186, 1502
MboII GAAGA 8 cut(s) 23, 116, 418, 443, 1014, 1175, 1353, 1711
MfeI CAATTG 1 cut(s) 1172
MflI RGATCY 3 cut(s) 448, 1077, 1502
MhlI GDGCHC 1 cut(s) 1583
MmeI TCCRAC 4 cut(s) 575, 851, 1139, 1479
Mph1103I ATGCAT 1 cut(s) 1332
MroXI GAANNNNTTC 1 cut(s) 31
MslI CAYNNNNRTG 1 cut(s) 1245
MspI CCGG 1 cut(s) 443
MspR9I CCNGG 2 cut(s) 239, 501
MunI CAATTG 1 cut(s) 1172
MvaI CCWGG 2 cut(s) 239, 501
MvnI CGCG 1 cut(s) 860
MwoI GCNNNNNNNGC 3 cut(s) 662, 857, 1748
NdeII GATC 7 cut(s) 135, 448, 962, 968, 1077, 1186, 1502
NlaIII CATG 6 cut(s) 254, 266, 783, 978, 1373, 1587
NlaIV GGNNCC 1 cut(s) 1079
NruI TCGCGA 1 cut(s) 860
NsiI ATGCAT 1 cut(s) 1332
PaqCI CACCTGC 1 cut(s) 157
PdmI GAANNNNTTC 1 cut(s) 31
PfeI GAWTC 3 cut(s) 32, 189, 494
PflFI GACNNNGTC 1 cut(s) 180
PflMI CCANNNNNTGG 1 cut(s) 735
PinAI ACCGGT 1 cut(s) 442
PkrI GCNGC 2 cut(s) 381, 941
PshBI ATTAAT 2 cut(s) 576, 1377
Psp1406I AACGTT 1 cut(s) 1837
Psp6I CCWGG 2 cut(s) 237, 499
PspFI CCCAGC 1 cut(s) 661
PspGI CCWGG 2 cut(s) 237, 499
PspN4I GGNNCC 1 cut(s) 1079
PspPI GGNCC 1 cut(s) 299
PsrI GAACNNNNNNTAC 2 cut(s) 95, 127
PsuI RGATCY 3 cut(s) 448, 1077, 1502
PsyI GACNNNGTC 1 cut(s) 180
RruI TCGCGA 1 cut(s) 860
RsaI GTAC 2 cut(s) 113, 351
RsaNI GTAC 2 cut(s) 112, 350
RseI CAYNNNNRTG 1 cut(s) 1245
SatI GCNGC 2 cut(s) 380, 940
Sau3AI GATC 7 cut(s) 135, 448, 962, 968, 1077, 1186, 1502
Sau96I GGNCC 1 cut(s) 299
ScrFI CCNGG 2 cut(s) 239, 501
SduI GDGCHC 1 cut(s) 1583
SfaNI GCATC 6 cut(s) 4, 538, 678, 999, 1114, 1563
SfcI CTRYAG 1 cut(s) 1221
SgrAI CRCCGGYG 1 cut(s) 442
SinI GGWCC 1 cut(s) 299
SmiMI CAYNNNNRTG 1 cut(s) 1245
SsiI CCGC 3 cut(s) 620, 654, 1448
SspI AATATT 1 cut(s) 472
SspMI CTAG 2 cut(s) 1652, 1743
StyD4I CCNGG 2 cut(s) 237, 499
StyI CCWWGG 1 cut(s) 1568
TaaI ACNGT 3 cut(s) 75, 1225, 1306
TaiI ACGT 2 cut(s) 1030, 1840
TaqI TCGA 1 cut(s) 965
TatI WGTACW 1 cut(s) 111
TfiI GAWTC 3 cut(s) 32, 189, 494
TscAI CASTG 5 cut(s) 533, 651, 776, 1309, 1474
TseI GCWGC 2 cut(s) 379, 939
TspDTI ATGAA 5 cut(s) 39, 1176, 1192, 1551, 1711
TspGWI ACGGA 1 cut(s) 388
TspRI CASTG 5 cut(s) 533, 651, 776, 1309, 1474
Tth111I GACNNNGTC 1 cut(s) 180
Van91I CCANNNNNTGG 1 cut(s) 735
VneI GTGCAC 1 cut(s) 1579
VpaK11BI GGWCC 1 cut(s) 299
VspI ATTAAT 2 cut(s) 576, 1377
XapI RAATTY 6 cut(s) 339, 630, 754, 909, 1731, 1820
XcmI CCANNNNNNNNNTGG 1 cut(s) 442
XmnI GAANNNNTTC 1 cut(s) 31
XspI CTAG 2 cut(s) 1652, 1743
Zsp2I ATGCAT 1 cut(s) 1332
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.