Rmu_sc0005257.1_g000010

ribonuclease H protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0005257.1
OG0000194
Physical Location & Seq
Reverse (-)
66817 .. 70346
3530 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0005257.1_g000010.1.cds

Sequence Viewer

Length: 1332 bp
atgatccttggcaaaaaccgtacattcgacatcggtttagtggccggagatggccggaatcgccgaaaatcaacgaaacctccgttcggctacagtaatctttgcggctcaattccgagctcctccggccaagccaccgcaaaacactaccataggcgtgacaaggaggaggaggtgagtttgccggtgcccggattccgtcgtgagtcggccggacaagggagaaatcggaggaagaataaaccagaccgaagaggaagaaagggtcggggggaaggagagagaagagccgtgggattctgctatcaaaattttgtggaaattggaggtccggaagatggtgaaccggtggaatatttgctgcgagttgtaaggagcttccggtggccggtttggtgggttttcgaccggttcttggggtgctgcagccagttctggattcctggaatcaagttcttcaatgtccccaacacccaaccacagattgttcatctcatcagctcggtactggacatgaaatcggtcccaaatctgggcagatatttgggtcttcctactgtttggggtagatcaaagatctcagctttggcttatgttaaagaaaacatccttccgaagatatcaatcaggtggtttggccgtttgggttccctcaatttggcggacttcaacattgctttgcttgcaaagcagggttggcgcatcatttccaatccgagtgctttgtgggtaagagttctaaaaagcatatatttccctcgctccactttcctagaggccacccgtggatcttccccttcatgggcttggtctagtctccttgaaggtaggcatctcatctcgagtggaggcatgtggcagtctcatgtcattgatagatcatccaactcttggaacctggaatctgtctcaactttcatccctttggaggtcttgaatgccatccaagcaaccacttttggctcccagagcgagcatgacaagctcatttgggcttccactacctcgggagtttactcggttaagtcaggttatgcattacaagtctcaggtacttcacaaaaccttgcctcacaccctcatcaatctcattctattgactctaaagtttggatctggttgtggcaattccgtgctactccaagagtgaaacatttcctttggaaggctctgtcaaatgtcttggctacaaatcataatcgtcacaacaggcacctagctcaatctcctttgtgccctctgtgccaagatcatcctgaaattgttgaacacatcctcttgtttagggctcgtcaatgggcctggccaggccgggcctttctatatttttaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4283 RVT_1 RVT_3 zf-CCHC_4 zf-RVT

Protein Analysis

443

Amino Acids

50.42

Weight (kDa)

10.33

Isoelectric Point (pI)

54.02

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000194)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G34320 AT4G29090 AT5G42965
fragaria_vesca FvH4_1g19471 FvH4_1g29471 FvH4_1g29601 FvH4_2g04611 FvH4_2g05763 FvH4_2g11451 FvH4_2g11841 FvH4_3g10391 FvH4_3g21491 FvH4_3g21492 FvH4_3g32111 FvH4_3g35051 FvH4_4g06793 FvH4_5g08844 FvH4_5g15942 FvH4_5g18751 FvH4_5g27367 FvH4_6g11612 FvH4_6g20242 FvH4_6g27671 FvH4_6g31921 FvH4_7g32463
malus_domestica MD06G1107000.v1.1 MD07G1135800.v1.1 MD08G1205700.v1.1
prunus_persica Prupe.1G202000_v2.0.a1 Prupe.2G049100_v2.0.a1 Prupe.2G060500_v2.0.a1 Prupe.3G120300_v2.0.a1 Prupe.3G135000_v2.0.a1 Prupe.6G087800_v2.0.a1 Prupe.6G158500_v2.0.a1 Prupe.6G353900_v2.0.a1 Prupe.7G008600_v2.0.a1 Prupe.8G090500_v2.0.a1
pyrus_communis pycom01g21690 pycom02g19910 pycom04g18080 pycom07g08600 pycom07g18710 pycom07g26560 pycom08g03130 pycom08g13950 pycom09g06380 pycom10g13390 pycom10g22280 pycom11g04440 pycom11g10940 pycom12g04710 pycom13g08790 pycom15g31740 pycom17g14740 pycom17g24980
rosa_chinensis RchiOBHm_Chr1g0327801 RchiOBHm_Chr1g0347181 RchiOBHm_Chr1g0348821 RchiOBHm_Chr2g0157831 RchiOBHm_Chr5g0040851 RchiOBHm_Chr6g0249781 RchiOBHm_Chr7g0208461 RchiOBHm_Chr7g0210911 RchiOBHm_Chr7g0219141
rosa_laevigata RLG00000034326
rosa_multiflora Rmu_co8140276.1_g000001 Rmu_co8282095.1_g000001 Rmu_co8303311.1_g000001 Rmu_co8314215.1_g000001 Rmu_co8345435.1_g000001 Rmu_co8461745.1_g000001 Rmu_sc0000315.1_g000040 Rmu_sc0000487.1_g000014 Rmu_sc0000690.1_g000002 Rmu_sc0000808.1_g000001 Rmu_sc0000938.1_g000009 Rmu_sc0001260.1_g000002 Rmu_sc0001534.1_g000008 Rmu_sc0001669.1_g000003 Rmu_sc0001685.1_g000050 Rmu_sc0001838.1_g000007 Rmu_sc0002193.1_g000025 Rmu_sc0002308.1_g000058 Rmu_sc0002322.1_g000018 Rmu_sc0002529.1_g000008 Rmu_sc0002531.1_g000043 Rmu_sc0002754.1_g000022 Rmu_sc0002902.1_g000055 Rmu_sc0003627.1_g000005 Rmu_sc0003743.1_g000003 Rmu_sc0003765.1_g000016 Rmu_sc0003941.1_g000020 Rmu_sc0004038.1_g000011 Rmu_sc0004329.1_g000010 Rmu_sc0004476.1_g000002 Rmu_sc0004904.1_g000022 Rmu_sc0004988.1_g000017 Rmu_sc0005217.1_g000006 Rmu_sc0005257.1_g000010 Rmu_sc0005285.1_g000008 Rmu_sc0005687.1_g000001 Rmu_sc0006380.1_g000020 Rmu_sc0006922.1_g000004 Rmu_sc0007398.1_g000007 Rmu_sc0008279.1_g000019 Rmu_sc0009139.1_g000004 Rmu_sc0009158.1_g000001 Rmu_sc0010099.1_g000002 Rmu_sc0019043.1_g000001 Rmu_sc0022037.1_g000001 Rmu_sc0023291.1_g000001 Rmu_sc0031928.1_g000001 Rmu_sc0034436.1_g000002 Rmu_ssc0000126.1_g000001 Rmu_ssc0000151.1_g000016 Rmu_ssc0000152.1_g000009 Rmu_ssc0000395.1_g000031
rosa_roxburghii Rroxscaffold_1G00056570 Rroxscaffold_1G00058460 Rroxscaffold_2G00106120 Rroxscaffold_2G00106260 Rroxscaffold_6G00399080
rosa_rugosa Rorug02G0173300 Rorug02G0225600 Rorug03G0083300 Rorug03G0104900 Rorug04G0256500 Rorug05G0342600 Rorug06G0006200 Rorug06G0095200 Rorug06G0095600 Rorug06G0111500 Rorug07G0001200 Rorug07G0183100 Rorug07G0183100 Rorug07G0209000
rosa_samantha Rh2DG065400 Rh3DG315900 Rh4AG106100 Rh4BG362100 Rh4CG030200 Rh4DG239000 Rh4DG294000 Rh6DG304800 Rh7DG149500
rosa_wichuraiana Rw1G018070 Rw1G021220 Rw1G021820 Rw1G026430 Rw2G050800 Rw3G023330 Rw6G010050 Rw6G010440 Rw7G031930 Rw7G033860

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 187, 1212
AccB7I CCANNNNNTGG 1 cut(s) 891
AccIII TCCGGA 1 cut(s) 331
AciI CCGC 3 cut(s) 105, 138, 662
AclWI GGATC 2 cut(s) 796, 1121
AcoI YGGCCR 7 cut(s) 42, 52, 127, 210, 386, 637, 1304
AcsI RAATTY 1 cut(s) 310
AfaI GTAC 3 cut(s) 22, 507, 1054
AgeI ACCGGT 2 cut(s) 346, 408
AgsI TTSAA 5 cut(s) 460, 670, 824, 937, 1268
AjnI CCWGG 4 cut(s) 442, 897, 1301, 1306
AluBI AGCT 6 cut(s) 120, 378, 501, 584, 985, 1220
AluI AGCT 6 cut(s) 120, 378, 501, 584, 985, 1220
Alw21I GWGCWC 1 cut(s) 122
Alw26I GTCTC 4 cut(s) 821, 867, 913, 1051
AlwI GGATC 2 cut(s) 796, 1121
Ama87I CYCGRG 2 cut(s) 841, 1006
Aor13HI TCCGGA 1 cut(s) 331
ApeKI GCWGC 3 cut(s) 361, 423, 426
ApoI RAATTY 1 cut(s) 310
AsiGI ACCGGT 2 cut(s) 346, 408
Asp700I GAANNNNTTC 1 cut(s) 1154
AspLEI GCGC 1 cut(s) 702
AspS9I GGNCC 4 cut(s) 329, 523, 1299, 1314
AsuC2I CCSGG 2 cut(s) 192, 1313
AsuHPI GGTGA 2 cut(s) 187, 353
AvaI CYCGRG 2 cut(s) 841, 1006
AvaII GGWCC 2 cut(s) 329, 523
BaeGI GKGCMC 2 cut(s) 192, 1238
BalI TGGCCA 1 cut(s) 1306
BanI GGYRCC 2 cut(s) 187, 1212
BanII GRGCYC 2 cut(s) 122, 1291
BbsI GAAGAC 1 cut(s) 542
Bbv12I GWGCWC 1 cut(s) 122
BbvI GCAGC 3 cut(s) 348, 410, 438
BccI CCATC 3 cut(s) 44, 332, 950
BceAI ACGGC 2 cut(s) 275, 624
BciT130I CCWGG 4 cut(s) 444, 899, 1303, 1308
BcnI CCSGG 2 cut(s) 192, 1313
BcoDI GTCTC 4 cut(s) 821, 867, 913, 1051
BfaI CTAG 3 cut(s) 773, 813, 1217
BfmI CTRYAG 2 cut(s) 91, 424
BglII AGATCT 1 cut(s) 576
BisI GCNGC 4 cut(s) 106, 362, 424, 427
BlsI GCNGC 4 cut(s) 107, 363, 425, 428
Bme1390I CCNGG 6 cut(s) 192, 444, 899, 1303, 1308, 1313
Bme18I GGWCC 2 cut(s) 329, 523
BmeT110I CYCGRG 2 cut(s) 841, 1006
BmgT120I GGNCC 4 cut(s) 329, 523, 1299, 1314
BmiI GGNNCC 6 cut(s) 189, 525, 649, 896, 964, 1214
BmrFI CCNGG 6 cut(s) 192, 444, 899, 1303, 1308, 1313
BmsI GCATC 2 cut(s) 711, 841
BpiI GAAGAC 1 cut(s) 542
BpuMI CCSGG 2 cut(s) 192, 1313
BsaBI GATNNNNATC 1 cut(s) 623
BsaJI CCNNGG 4 cut(s) 7, 291, 784, 1005
BsaWI WCCGGW 4 cut(s) 331, 346, 381, 408
BsaXI ACNNNNNCTCC 2 cut(s) 64, 94
Bse118I RCCGGY 4 cut(s) 184, 346, 388, 408
Bse1I ACTGG 2 cut(s) 430, 513
Bse3DI GCAATG 1 cut(s) 672
Bse8I GATNNNNATC 1 cut(s) 623
BseAI TCCGGA 1 cut(s) 331
BseBI CCWGG 4 cut(s) 444, 899, 1303, 1308
BseDI CCNNGG 4 cut(s) 7, 291, 784, 1005
BseGI GGATG 6 cut(s) 606, 881, 918, 942, 1252, 1272
BseJI GATNNNNATC 1 cut(s) 623
BseMI GCAATG 1 cut(s) 672
BseMII CTCAG 2 cut(s) 594, 1062
BseNI ACTGG 2 cut(s) 430, 513
BseRI GAGGAG 3 cut(s) 112, 182, 185
BseSI GKGCMC 2 cut(s) 192, 1238
BseX3I CGGCCG 1 cut(s) 210
BseXI GCAGC 3 cut(s) 348, 410, 438
Bsh1285I CGRYCG 2 cut(s) 213, 409
BshNI GGYRCC 2 cut(s) 187, 1212
BshTI ACCGGT 2 cut(s) 346, 408
BsiEI CGRYCG 2 cut(s) 213, 409
BsiHKAI GWGCWC 1 cut(s) 122
BsiHKCI CYCGRG 2 cut(s) 841, 1006
BslFI GGGAC 2 cut(s) 449, 509
BsmAI GTCTC 4 cut(s) 821, 867, 913, 1051
BsmFI GGGAC 2 cut(s) 449, 509
BsmI GAATGC 1 cut(s) 943
BsoBI CYCGRG 2 cut(s) 841, 1006
Bsp1286I GDGCHC 4 cut(s) 122, 192, 1238, 1291
Bsp13I TCCGGA 1 cut(s) 331
Bsp143I GATC 7 cut(s) 3, 569, 576, 788, 878, 1113, 1249
BspACI CCGC 3 cut(s) 105, 138, 662
BspCNI CTCAG 2 cut(s) 593, 1061
BspEI TCCGGA 1 cut(s) 331
BspLI GGNNCC 6 cut(s) 189, 525, 649, 896, 964, 1214
BspMAI CTGCAG 1 cut(s) 428
BspPI GGATC 2 cut(s) 796, 1121
BspQI GCTCTTC 1 cut(s) 280
BspT107I GGYRCC 2 cut(s) 187, 1212
BsrDI GCAATG 1 cut(s) 672
BsrFI RCCGGY 4 cut(s) 184, 346, 388, 408
BsrI ACTGG 2 cut(s) 430, 513
BssAI RCCGGY 4 cut(s) 184, 346, 388, 408
BssECI CCNNGG 4 cut(s) 7, 291, 784, 1005
BssMI GATC 7 cut(s) 3, 569, 576, 788, 878, 1113, 1249
BssT1I CCWWGG 1 cut(s) 7
Bst2UI CCWGG 4 cut(s) 444, 899, 1303, 1308
Bst4CI ACNGT 3 cut(s) 20, 95, 559
Bst6I CTCTTC 2 cut(s) 247, 280
BstC8I GCNNGC 2 cut(s) 684, 974
BstDEI CTNAG 2 cut(s) 580, 1048
BstDSI CCRYGG 2 cut(s) 291, 784
BstENI CCTNNNNNAGG 1 cut(s) 1163
BstF5I GGATG 6 cut(s) 606, 881, 918, 942, 1252, 1272
BstHHI GCGC 1 cut(s) 702
BstKTI GATC 7 cut(s) 6, 572, 579, 791, 881, 1116, 1252
BstMAI GTCTC 4 cut(s) 821, 867, 913, 1051
BstMBI GATC 7 cut(s) 3, 569, 576, 788, 878, 1113, 1249
BstMCI CGRYCG 2 cut(s) 213, 409
BstMWI GCNNNNNNNGC 9 cut(s) 60, 126, 683, 688, 697, 947, 969, 982, 1242
BstNI CCWGG 4 cut(s) 444, 899, 1303, 1308
BstNSI RCATGY 1 cut(s) 856
BstSCI CCNGG 6 cut(s) 190, 442, 897, 1301, 1306, 1311
BstSFI CTRYAG 2 cut(s) 91, 424
BstSLI GKGCMC 2 cut(s) 192, 1238
BstV1I GCAGC 3 cut(s) 348, 410, 438
BstV2I GAAGAC 1 cut(s) 542
BstX2I RGATCY 3 cut(s) 576, 788, 1113
BstYI RGATCY 3 cut(s) 576, 788, 1113
BstZI CGGCCG 1 cut(s) 210
BtgI CCRYGG 2 cut(s) 291, 784
BtsCI GGATG 6 cut(s) 606, 881, 918, 942, 1252, 1272
Cac8I GCNNGC 2 cut(s) 684, 974
CfoI GCGC 1 cut(s) 702
Cfr10I RCCGGY 4 cut(s) 184, 346, 388, 408
Cfr13I GGNCC 4 cut(s) 329, 523, 1299, 1314
Csp6I GTAC 3 cut(s) 21, 506, 1053
CspAI ACCGGT 2 cut(s) 346, 408
CviAII CATG 5 cut(s) 514, 801, 853, 866, 977
CviQI GTAC 3 cut(s) 21, 506, 1053
DdeI CTNAG 2 cut(s) 580, 1048
DpnI GATC 7 cut(s) 5, 571, 578, 790, 880, 1115, 1251
DpnII GATC 7 cut(s) 3, 569, 576, 788, 878, 1113, 1249
EaeI YGGCCR 7 cut(s) 42, 52, 127, 210, 386, 637, 1304
EagI CGGCCG 1 cut(s) 210
Eam1104I CTCTTC 2 cut(s) 247, 280
EarI CTCTTC 2 cut(s) 247, 280
EciI GGCGGA 1 cut(s) 677
Ecl136II GAGCTC 1 cut(s) 120
EclXI CGGCCG 1 cut(s) 210
Eco130I CCWWGG 1 cut(s) 7
Eco24I GRGCYC 2 cut(s) 122, 1291
Eco32I GATATC 1 cut(s) 621
Eco47I GGWCC 2 cut(s) 329, 523
Eco52I CGGCCG 1 cut(s) 210
Eco53kI GAGCTC 1 cut(s) 120
Eco88I CYCGRG 2 cut(s) 841, 1006
EcoICRI GAGCTC 1 cut(s) 120
EcoNI CCTNNNNNAGG 1 cut(s) 1163
EcoRII CCWGG 4 cut(s) 442, 897, 1301, 1306
EcoRV GATATC 1 cut(s) 621
EcoT14I CCWWGG 1 cut(s) 7
EcoT22I ATGCAT 1 cut(s) 1039
EcoT38I GRGCYC 2 cut(s) 122, 1291
ErhI CCWWGG 1 cut(s) 7
FaeI CATG 5 cut(s) 517, 804, 856, 869, 980
FaqI GGGAC 2 cut(s) 449, 509
FatI CATG 5 cut(s) 513, 800, 852, 865, 976
Fnu4HI GCNGC 4 cut(s) 106, 362, 424, 427
FokI GGATG 6 cut(s) 593, 868, 905, 929, 1239, 1259
FriOI GRGCYC 2 cut(s) 122, 1291
Fsp4HI GCNGC 4 cut(s) 106, 362, 424, 427
FspBI CTAG 3 cut(s) 773, 813, 1217
GlaI GCGC 1 cut(s) 701
GluI GCNGC 4 cut(s) 106, 362, 424, 427
HhaI GCGC 1 cut(s) 702
Hin1II CATG 5 cut(s) 517, 804, 856, 869, 980
Hin6I GCGC 1 cut(s) 700
HinP1I GCGC 1 cut(s) 700
HinfI GANTC 8 cut(s) 58, 195, 206, 297, 439, 447, 902, 1100
HphI GGTGA 2 cut(s) 187, 353
Hpy166II GTNNAC 2 cut(s) 344, 1015
Hpy188I TCNGA 4 cut(s) 117, 231, 615, 717
Hpy188III TCNNGA 7 cut(s) 203, 332, 436, 841, 934, 1008, 1256
Hpy8I GTNNAC 2 cut(s) 344, 1015
Hpy99I CGWCG 1 cut(s) 204
HpyAV CCTTC 5 cut(s) 269, 620, 807, 818, 1159
HpyCH4III ACNGT 3 cut(s) 20, 95, 559
HpyCH4V TGCA 3 cut(s) 426, 686, 1037
HpyF10VI GCNNNNNNNGC 9 cut(s) 60, 126, 683, 688, 697, 947, 969, 982, 1242
HpyF3I CTNAG 2 cut(s) 580, 1048
Hsp92II CATG 5 cut(s) 517, 804, 856, 869, 980
HspAI GCGC 1 cut(s) 700
Kpn2I TCCGGA 1 cut(s) 331
Kzo9I GATC 7 cut(s) 3, 569, 576, 788, 878, 1113, 1249
LguI GCTCTTC 1 cut(s) 280
LmnI GCTCC 4 cut(s) 125, 375, 767, 968
Lsp1109I GCAGC 3 cut(s) 348, 410, 438
LweI GCATC 2 cut(s) 711, 841
MaeI CTAG 3 cut(s) 773, 813, 1217
MaeIII GTNAC 2 cut(s) 158, 1202
MalI GATC 7 cut(s) 5, 571, 578, 790, 880, 1115, 1251
MboI GATC 7 cut(s) 3, 569, 576, 788, 878, 1113, 1249
MboII GAAGA 9 cut(s) 247, 264, 270, 297, 347, 448, 542, 628, 783
MflI RGATCY 3 cut(s) 576, 788, 1113
MhlI GDGCHC 4 cut(s) 122, 192, 1238, 1291
MlsI TGGCCA 1 cut(s) 1306
MluCI AATT 6 cut(s) 111, 310, 321, 655, 1127, 1260
MluNI TGGCCA 1 cut(s) 1306
MlyI GAGTC 2 cut(s) 215, 1094
MmeI TCCRAC 1 cut(s) 909
Mox20I TGGCCA 1 cut(s) 1306
Mph1103I ATGCAT 1 cut(s) 1039
MroI TCCGGA 1 cut(s) 331
MroXI GAANNNNTTC 1 cut(s) 1154
MscI TGGCCA 1 cut(s) 1306
MseI TTAA 3 cut(s) 597, 1023, 1330
MslI CAYNNNNRTG 1 cut(s) 156
Msp20I TGGCCA 1 cut(s) 1306
MspR9I CCNGG 6 cut(s) 192, 444, 899, 1303, 1308, 1313
Mva1269I GAATGC 1 cut(s) 943
MvaI CCWGG 4 cut(s) 444, 899, 1303, 1308
MwoI GCNNNNNNNGC 9 cut(s) 60, 126, 683, 688, 697, 947, 969, 982, 1242
NciI CCSGG 2 cut(s) 192, 1313
NdeII GATC 7 cut(s) 3, 569, 576, 788, 878, 1113, 1249
NlaIII CATG 5 cut(s) 517, 804, 856, 869, 980
NlaIV GGNNCC 6 cut(s) 189, 525, 649, 896, 964, 1214
NmuCI GTSAC 2 cut(s) 158, 1202
NsiI ATGCAT 1 cut(s) 1039
NspI RCATGY 1 cut(s) 856
PaeR7I CTCGAG 1 cut(s) 841
PciSI GCTCTTC 1 cut(s) 280
PcsI WCGNNNNNNNCGW 1 cut(s) 80
PctI GAATGC 1 cut(s) 943
PdmI GAANNNNTTC 1 cut(s) 1154
PfeI GAWTC 6 cut(s) 58, 195, 297, 439, 447, 902
PflMI CCANNNNNTGG 1 cut(s) 891
PfoI TCCNGGA 1 cut(s) 442
PinAI ACCGGT 2 cut(s) 346, 408
PkrI GCNGC 4 cut(s) 107, 363, 425, 428
PleI GAGTC 2 cut(s) 214, 1094
PpsI GAGTC 2 cut(s) 214, 1094
Psp124BI GAGCTC 1 cut(s) 122
Psp6I CCWGG 4 cut(s) 442, 897, 1301, 1306
PspGI CCWGG 4 cut(s) 442, 897, 1301, 1306
PspN4I GGNNCC 6 cut(s) 189, 525, 649, 896, 964, 1214
PspPI GGNCC 4 cut(s) 329, 523, 1299, 1314
PstI CTGCAG 1 cut(s) 428
PsuI RGATCY 3 cut(s) 576, 788, 1113
RsaI GTAC 3 cut(s) 22, 507, 1054
RsaNI GTAC 3 cut(s) 21, 506, 1053
RseI CAYNNNNRTG 1 cut(s) 156
SacI GAGCTC 1 cut(s) 122
SapI GCTCTTC 1 cut(s) 280
SaqAI TTAA 3 cut(s) 597, 1023, 1330
SatI GCNGC 4 cut(s) 106, 362, 424, 427
Sau3AI GATC 7 cut(s) 3, 569, 576, 788, 878, 1113, 1249
Sau96I GGNCC 4 cut(s) 329, 523, 1299, 1314
SchI GAGTC 2 cut(s) 215, 1094
ScrFI CCNGG 6 cut(s) 192, 444, 899, 1303, 1308, 1313
SduI GDGCHC 4 cut(s) 122, 192, 1238, 1291
SfaNI GCATC 2 cut(s) 711, 841
SfcI CTRYAG 2 cut(s) 91, 424
Sfr274I CTCGAG 1 cut(s) 841
SinI GGWCC 2 cut(s) 329, 523
SlaI CTCGAG 1 cut(s) 841
SmiMI CAYNNNNRTG 1 cut(s) 156
SmlI CTYRAG 1 cut(s) 841
SmoI CTYRAG 1 cut(s) 841
Sse9I AATT 6 cut(s) 111, 310, 321, 655, 1127, 1260
SsiI CCGC 3 cut(s) 105, 138, 662
SspI AATATT 1 cut(s) 356
SspMI CTAG 3 cut(s) 773, 813, 1217
SstI GAGCTC 1 cut(s) 122
StyD4I CCNGG 6 cut(s) 190, 442, 897, 1301, 1306, 1311
StyI CCWWGG 1 cut(s) 7
TaaI ACNGT 3 cut(s) 20, 95, 559
TaqI TCGA 3 cut(s) 27, 405, 842
TaqII GACCGA 2 cut(s) 264, 511
TasI AATT 6 cut(s) 111, 310, 321, 655, 1127, 1260
TauI GCSGC 1 cut(s) 108
TfiI GAWTC 6 cut(s) 58, 195, 297, 439, 447, 902
Tru1I TTAA 3 cut(s) 597, 1023, 1330
Tru9I TTAA 3 cut(s) 597, 1023, 1330
TseFI GTSAC 2 cut(s) 158, 1202
TseI GCWGC 3 cut(s) 361, 423, 426
Tsp45I GTSAC 2 cut(s) 158, 1202
TspDTI ATGAA 4 cut(s) 479, 530, 789, 907
TspGWI ACGGA 3 cut(s) 72, 188, 1121
Van91I CCANNNNNTGG 1 cut(s) 891
VpaK11BI GGWCC 2 cut(s) 329, 523
XagI CCTNNNNNAGG 1 cut(s) 1163
XapI RAATTY 1 cut(s) 310
XceI RCATGY 1 cut(s) 856
XhoI CTCGAG 1 cut(s) 841
XmnI GAANNNNTTC 1 cut(s) 1154
XspI CTAG 3 cut(s) 773, 813, 1217
Zsp2I ATGCAT 1 cut(s) 1039
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.