ribonuclease H protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 109 |
| AciI | CCGC | 1 cut(s) | 40 |
| AclWI | GGATC | 3 cut(s) | 14, 94, 310 |
| AcsI | RAATTY | 1 cut(s) | 393 |
| AcuI | CTGAAG | 1 cut(s) | 89 |
| AluBI | AGCT | 1 cut(s) | 408 |
| AluI | AGCT | 1 cut(s) | 408 |
| AlwI | GGATC | 3 cut(s) | 14, 94, 310 |
| ApeKI | GCWGC | 1 cut(s) | 424 |
| ApoI | RAATTY | 1 cut(s) | 393 |
| AseI | ATTAAT | 1 cut(s) | 123 |
| AsuC2I | CCSGG | 1 cut(s) | 129 |
| AsuHPI | GGTGA | 1 cut(s) | 51 |
| BaeGI | GKGCMC | 2 cut(s) | 114, 291 |
| BanI | GGYRCC | 1 cut(s) | 109 |
| BanII | GRGCYC | 1 cut(s) | 147 |
| BbvI | GCAGC | 1 cut(s) | 411 |
| BcnI | CCSGG | 1 cut(s) | 129 |
| BisI | GCNGC | 1 cut(s) | 425 |
| BlsI | GCNGC | 1 cut(s) | 426 |
| Bme1390I | CCNGG | 1 cut(s) | 129 |
| BmiI | GGNNCC | 2 cut(s) | 111, 146 |
| BmrFI | CCNGG | 1 cut(s) | 129 |
| BmsI | GCATC | 3 cut(s) | 16, 38, 334 |
| BpuMI | CCSGG | 1 cut(s) | 129 |
| BsaJI | CCNNGG | 1 cut(s) | 128 |
| Bse1I | ACTGG | 1 cut(s) | 404 |
| BseDI | CCNNGG | 1 cut(s) | 128 |
| BseNI | ACTGG | 1 cut(s) | 404 |
| BseSI | GKGCMC | 2 cut(s) | 114, 291 |
| BseXI | GCAGC | 1 cut(s) | 411 |
| BseYI | CCCAGC | 1 cut(s) | 408 |
| BshNI | GGYRCC | 1 cut(s) | 109 |
| BsiSI | CCGG | 1 cut(s) | 128 |
| BslFI | GGGAC | 1 cut(s) | 247 |
| BsmFI | GGGAC | 1 cut(s) | 247 |
| Bsp1286I | GDGCHC | 3 cut(s) | 114, 147, 291 |
| Bsp143I | GATC | 3 cut(s) | 6, 99, 315 |
| BspACI | CCGC | 1 cut(s) | 40 |
| BspLI | GGNNCC | 2 cut(s) | 111, 146 |
| BspPI | GGATC | 3 cut(s) | 14, 94, 310 |
| BspT107I | GGYRCC | 1 cut(s) | 109 |
| BsrI | ACTGG | 1 cut(s) | 404 |
| BssECI | CCNNGG | 1 cut(s) | 128 |
| BssMI | GATC | 3 cut(s) | 6, 99, 315 |
| Bst4CI | ACNGT | 1 cut(s) | 154 |
| Bst6I | CTCTTC | 1 cut(s) | 247 |
| BstDEI | CTNAG | 1 cut(s) | 49 |
| BstKTI | GATC | 3 cut(s) | 9, 102, 318 |
| BstMBI | GATC | 3 cut(s) | 6, 99, 315 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 353 |
| BstSCI | CCNGG | 1 cut(s) | 127 |
| BstSLI | GKGCMC | 2 cut(s) | 114, 291 |
| BstV1I | GCAGC | 1 cut(s) | 411 |
| BstX2I | RGATCY | 2 cut(s) | 99, 315 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 156 |
| BstYI | RGATCY | 2 cut(s) | 99, 315 |
| BtsI | GCAGTG | 2 cut(s) | 291, 304 |
| BtsIMutI | CAGTG | 4 cut(s) | 279, 291, 304, 397 |
| CviJI | RGCY | 4 cut(s) | 145, 176, 408, 424 |
| CviKI_1 | RGCY | 4 cut(s) | 145, 176, 408, 424 |
| DdeI | CTNAG | 1 cut(s) | 49 |
| DpnI | GATC | 3 cut(s) | 8, 101, 317 |
| DpnII | GATC | 3 cut(s) | 6, 99, 315 |
| Eam1104I | CTCTTC | 1 cut(s) | 247 |
| EarI | CTCTTC | 1 cut(s) | 247 |
| Eco24I | GRGCYC | 1 cut(s) | 147 |
| Eco57I | CTGAAG | 1 cut(s) | 89 |
| EcoT22I | ATGCAT | 1 cut(s) | 31 |
| EcoT38I | GRGCYC | 1 cut(s) | 147 |
| FaiI | YATR | 5 cut(s) | 11, 83, 206, 331, 353 |
| FaqI | GGGAC | 1 cut(s) | 247 |
| FauI | CCCGC | 1 cut(s) | 33 |
| Fnu4HI | GCNGC | 1 cut(s) | 425 |
| FriOI | GRGCYC | 1 cut(s) | 147 |
| Fsp4HI | GCNGC | 1 cut(s) | 425 |
| GluI | GCNGC | 1 cut(s) | 425 |
| GsaI | CCCAGC | 1 cut(s) | 412 |
| HapII | CCGG | 1 cut(s) | 128 |
| HincII | GTYRAC | 1 cut(s) | 46 |
| HindII | GTYRAC | 1 cut(s) | 46 |
| HpaII | CCGG | 1 cut(s) | 128 |
| HphI | GGTGA | 1 cut(s) | 51 |
| Hpy166II | GTNNAC | 1 cut(s) | 46 |
| Hpy8I | GTNNAC | 1 cut(s) | 46 |
| HpyAV | CCTTC | 1 cut(s) | 113 |
| HpyCH4III | ACNGT | 1 cut(s) | 154 |
| HpyCH4V | TGCA | 4 cut(s) | 29, 217, 304, 347 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 353 |
| HpyF3I | CTNAG | 1 cut(s) | 49 |
| Kzo9I | GATC | 3 cut(s) | 6, 99, 315 |
| LmnI | GCTCC | 1 cut(s) | 150 |
| LpnPI | CCDG | 6 cut(s) | 92, 141, 262, 368, 385, 394 |
| Lsp1109I | GCAGC | 1 cut(s) | 411 |
| LweI | GCATC | 3 cut(s) | 16, 38, 334 |
| MaeIII | GTNAC | 1 cut(s) | 57 |
| MalI | GATC | 3 cut(s) | 8, 101, 317 |
| MboI | GATC | 3 cut(s) | 6, 99, 315 |
| MboII | GAAGA | 1 cut(s) | 264 |
| MflI | RGATCY | 2 cut(s) | 99, 315 |
| MhlI | GDGCHC | 3 cut(s) | 114, 147, 291 |
| MluCI | AATT | 4 cut(s) | 212, 264, 393, 431 |
| MnlI | CCTC | 3 cut(s) | 26, 250, 434 |
| Mph1103I | ATGCAT | 1 cut(s) | 31 |
| MseI | TTAA | 5 cut(s) | 123, 263, 267, 312, 434 |
| MspI | CCGG | 1 cut(s) | 128 |
| MspR9I | CCNGG | 1 cut(s) | 129 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 353 |
| NciI | CCSGG | 1 cut(s) | 129 |
| NdeII | GATC | 3 cut(s) | 6, 99, 315 |
| NlaIV | GGNNCC | 2 cut(s) | 111, 146 |
| NmuCI | GTSAC | 1 cut(s) | 57 |
| NsiI | ATGCAT | 1 cut(s) | 31 |
| PacI | TTAATTAA | 1 cut(s) | 267 |
| PkrI | GCNGC | 1 cut(s) | 426 |
| PshBI | ATTAAT | 1 cut(s) | 123 |
| PspFI | CCCAGC | 1 cut(s) | 408 |
| PspN4I | GGNNCC | 2 cut(s) | 111, 146 |
| PsuI | RGATCY | 2 cut(s) | 99, 315 |
| SaqAI | TTAA | 5 cut(s) | 123, 263, 267, 312, 434 |
| SatI | GCNGC | 1 cut(s) | 425 |
| Sau3AI | GATC | 3 cut(s) | 6, 99, 315 |
| ScrFI | CCNGG | 1 cut(s) | 129 |
| SduI | GDGCHC | 3 cut(s) | 114, 147, 291 |
| SetI | ASST | 4 cut(s) | 18, 111, 261, 410 |
| SfaNI | GCATC | 3 cut(s) | 16, 38, 334 |
| Sse9I | AATT | 4 cut(s) | 212, 264, 393, 431 |
| SsiI | CCGC | 1 cut(s) | 40 |
| StyD4I | CCNGG | 1 cut(s) | 127 |
| TaaI | ACNGT | 1 cut(s) | 154 |
| TasI | AATT | 4 cut(s) | 212, 264, 393, 431 |
| Tru1I | TTAA | 5 cut(s) | 123, 263, 267, 312, 434 |
| Tru9I | TTAA | 5 cut(s) | 123, 263, 267, 312, 434 |
| TscAI | CASTG | 4 cut(s) | 279, 291, 311, 404 |
| TseFI | GTSAC | 1 cut(s) | 57 |
| TseI | GCWGC | 1 cut(s) | 424 |
| Tsp45I | GTSAC | 1 cut(s) | 57 |
| TspDTI | ATGAA | 1 cut(s) | 178 |
| TspRI | CASTG | 4 cut(s) | 279, 291, 311, 404 |
| VspI | ATTAAT | 1 cut(s) | 123 |
| XapI | RAATTY | 1 cut(s) | 393 |
| Zsp2I | ATGCAT | 1 cut(s) | 31 |