ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 2 cut(s) | 223, 387 |
| AcsI | RAATTY | 1 cut(s) | 22 |
| AfaI | GTAC | 2 cut(s) | 119, 454 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 153, 287 |
| AgsI | TTSAA | 1 cut(s) | 578 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 591 |
| AjnI | CCWGG | 2 cut(s) | 124, 473 |
| AluBI | AGCT | 1 cut(s) | 308 |
| AluI | AGCT | 1 cut(s) | 308 |
| Alw26I | GTCTC | 1 cut(s) | 378 |
| AlwI | GGATC | 2 cut(s) | 223, 387 |
| AoxI | GGCC | 1 cut(s) | 470 |
| ApoI | RAATTY | 1 cut(s) | 22 |
| AspS9I | GGNCC | 3 cut(s) | 177, 358, 471 |
| AsuHPI | GGTGA | 1 cut(s) | 421 |
| AvaII | GGWCC | 2 cut(s) | 177, 358 |
| BaeGI | GKGCMC | 1 cut(s) | 159 |
| BccI | CCATC | 2 cut(s) | 4, 437 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 512, 546 |
| BciT130I | CCWGG | 2 cut(s) | 126, 475 |
| BclI | TGATCA | 1 cut(s) | 204 |
| BcoDI | GTCTC | 1 cut(s) | 378 |
| BfaI | CTAG | 2 cut(s) | 185, 309 |
| Bme1390I | CCNGG | 2 cut(s) | 126, 475 |
| Bme18I | GGWCC | 2 cut(s) | 177, 358 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 591 |
| BmgT120I | GGNCC | 3 cut(s) | 177, 358, 471 |
| BmiI | GGNNCC | 1 cut(s) | 359 |
| BmrFI | CCNGG | 2 cut(s) | 126, 475 |
| BmsI | GCATC | 1 cut(s) | 400 |
| BpmI | CTGGAG | 1 cut(s) | 85 |
| Bpu10I | CCTNAGC | 1 cut(s) | 99 |
| Bsa29I | ATCGAT | 1 cut(s) | 351 |
| BsaI | GGTCTC | 1 cut(s) | 378 |
| BsaJI | CCNNGG | 3 cut(s) | 301, 404, 473 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 153, 287 |
| Bse1I | ACTGG | 1 cut(s) | 180 |
| BseBI | CCWGG | 2 cut(s) | 126, 475 |
| BseCI | ATCGAT | 1 cut(s) | 351 |
| BseDI | CCNNGG | 3 cut(s) | 301, 404, 473 |
| BseGI | GGATG | 3 cut(s) | 15, 384, 448 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 153, 287 |
| BseNI | ACTGG | 1 cut(s) | 180 |
| BseRI | GAGGAG | 1 cut(s) | 553 |
| BseSI | GKGCMC | 1 cut(s) | 159 |
| BshFI | GGCC | 1 cut(s) | 472 |
| BshVI | ATCGAT | 1 cut(s) | 351 |
| BslFI | GGGAC | 1 cut(s) | 371 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 153, 287 |
| BsmAI | GTCTC | 1 cut(s) | 378 |
| BsmFI | GGGAC | 1 cut(s) | 371 |
| BsnI | GGCC | 1 cut(s) | 472 |
| Bso31I | GGTCTC | 1 cut(s) | 378 |
| Bsp1286I | GDGCHC | 1 cut(s) | 159 |
| Bsp143I | GATC | 3 cut(s) | 204, 215, 379 |
| BspANI | GGCC | 1 cut(s) | 472 |
| BspDI | ATCGAT | 1 cut(s) | 351 |
| BspHI | TCATGA | 1 cut(s) | 207 |
| BspLI | GGNNCC | 1 cut(s) | 359 |
| BspPI | GGATC | 2 cut(s) | 223, 387 |
| BspTNI | GGTCTC | 1 cut(s) | 378 |
| BsrI | ACTGG | 1 cut(s) | 180 |
| BssECI | CCNNGG | 3 cut(s) | 301, 404, 473 |
| BssMI | GATC | 3 cut(s) | 204, 215, 379 |
| BssT1I | CCWWGG | 1 cut(s) | 301 |
| Bst2UI | CCWGG | 2 cut(s) | 126, 475 |
| Bst4CI | ACNGT | 2 cut(s) | 60, 325 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 397 |
| BstDEI | CTNAG | 2 cut(s) | 99, 150 |
| BstEII | GGTNACC | 1 cut(s) | 509 |
| BstF5I | GGATG | 3 cut(s) | 15, 384, 448 |
| BstKTI | GATC | 3 cut(s) | 207, 218, 382 |
| BstMAI | GTCTC | 1 cut(s) | 378 |
| BstMBI | GATC | 3 cut(s) | 204, 215, 379 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 397, 469 |
| BstNI | CCWGG | 2 cut(s) | 126, 475 |
| BstPI | GGTNACC | 1 cut(s) | 509 |
| BstSCI | CCNGG | 2 cut(s) | 124, 473 |
| BstSLI | GKGCMC | 1 cut(s) | 159 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 187 |
| Bsu15I | ATCGAT | 1 cut(s) | 351 |
| BsuRI | GGCC | 1 cut(s) | 472 |
| BsuTUI | ATCGAT | 1 cut(s) | 351 |
| BtsCI | GGATG | 3 cut(s) | 15, 384, 448 |
| BtsIMutI | CAGTG | 1 cut(s) | 65 |
| CciI | TCATGA | 1 cut(s) | 207 |
| Cfr13I | GGNCC | 3 cut(s) | 177, 358, 471 |
| ClaI | ATCGAT | 1 cut(s) | 351 |
| Csp6I | GTAC | 2 cut(s) | 118, 453 |
| CviAII | CATG | 3 cut(s) | 40, 208, 449 |
| CviJI | RGCY | 5 cut(s) | 98, 271, 308, 463, 472 |
| CviKI_1 | RGCY | 5 cut(s) | 98, 271, 308, 463, 472 |
| CviQI | GTAC | 2 cut(s) | 118, 453 |
| DdeI | CTNAG | 2 cut(s) | 99, 150 |
| DpnI | GATC | 3 cut(s) | 206, 217, 381 |
| DpnII | GATC | 3 cut(s) | 204, 215, 379 |
| DriI | GACNNNNNGTC | 1 cut(s) | 591 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 591 |
| Eco130I | CCWWGG | 1 cut(s) | 301 |
| Eco31I | GGTCTC | 1 cut(s) | 378 |
| Eco32I | GATATC | 1 cut(s) | 253 |
| Eco47I | GGWCC | 2 cut(s) | 177, 358 |
| Eco91I | GGTNACC | 1 cut(s) | 509 |
| EcoO109I | RGGNCCY | 1 cut(s) | 358 |
| EcoO65I | GGTNACC | 1 cut(s) | 509 |
| EcoRII | CCWGG | 2 cut(s) | 124, 473 |
| EcoRV | GATATC | 1 cut(s) | 253 |
| EcoT14I | CCWWGG | 1 cut(s) | 301 |
| ErhI | CCWWGG | 1 cut(s) | 301 |
| FaeI | CATG | 3 cut(s) | 43, 211, 452 |
| FalI | AAGNNNNNCTT | 1 cut(s) | 620 |
| FaqI | GGGAC | 1 cut(s) | 371 |
| FatI | CATG | 3 cut(s) | 39, 207, 448 |
| FbaI | TGATCA | 1 cut(s) | 204 |
| FokI | GGATG | 3 cut(s) | 22, 371, 455 |
| FspBI | CTAG | 2 cut(s) | 185, 309 |
| GsuI | CTGGAG | 1 cut(s) | 85 |
| HaeIII | GGCC | 1 cut(s) | 472 |
| Hin1II | CATG | 3 cut(s) | 43, 211, 452 |
| HinfI | GANTC | 5 cut(s) | 15, 366, 421, 592, 611 |
| HphI | GGTGA | 1 cut(s) | 421 |
| Hpy166II | GTNNAC | 1 cut(s) | 340 |
| Hpy188I | TCNGA | 2 cut(s) | 140, 597 |
| Hpy188III | TCNNGA | 4 cut(s) | 19, 208, 256, 377 |
| Hpy8I | GTNNAC | 1 cut(s) | 340 |
| HpyAV | CCTTC | 1 cut(s) | 253 |
| HpyCH4III | ACNGT | 2 cut(s) | 60, 325 |
| HpyCH4V | TGCA | 5 cut(s) | 28, 391, 400, 523, 552 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 397, 469 |
| HpyF3I | CTNAG | 2 cut(s) | 99, 150 |
| Hsp92II | CATG | 3 cut(s) | 43, 211, 452 |
| Ksp22I | TGATCA | 1 cut(s) | 204 |
| Kzo9I | GATC | 3 cut(s) | 204, 215, 379 |
| LmnI | GCTCC | 1 cut(s) | 305 |
| LweI | GCATC | 1 cut(s) | 400 |
| MaeI | CTAG | 2 cut(s) | 185, 309 |
| MaeIII | GTNAC | 2 cut(s) | 69, 509 |
| MalI | GATC | 3 cut(s) | 206, 217, 381 |
| MboI | GATC | 3 cut(s) | 204, 215, 379 |
| MfeI | CAATTG | 1 cut(s) | 265 |
| MhlI | GDGCHC | 1 cut(s) | 159 |
| MluCI | AATT | 2 cut(s) | 22, 265 |
| MlyI | GAGTC | 1 cut(s) | 601 |
| MnlI | CCTC | 4 cut(s) | 60, 327, 399, 574 |
| MseI | TTAA | 5 cut(s) | 36, 347, 414, 501, 627 |
| MspR9I | CCNGG | 2 cut(s) | 126, 475 |
| MunI | CAATTG | 1 cut(s) | 265 |
| MvaI | CCWGG | 2 cut(s) | 126, 475 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 397, 469 |
| NdeII | GATC | 3 cut(s) | 204, 215, 379 |
| NlaIII | CATG | 3 cut(s) | 43, 211, 452 |
| NlaIV | GGNNCC | 1 cut(s) | 359 |
| PagI | TCATGA | 1 cut(s) | 207 |
| PfeI | GAWTC | 4 cut(s) | 15, 366, 421, 611 |
| PleI | GAGTC | 1 cut(s) | 600 |
| PpsI | GAGTC | 1 cut(s) | 600 |
| PpuMI | RGGWCCY | 1 cut(s) | 358 |
| Psp5II | RGGWCCY | 1 cut(s) | 358 |
| Psp6I | CCWGG | 2 cut(s) | 124, 473 |
| PspEI | GGTNACC | 1 cut(s) | 509 |
| PspGI | CCWGG | 2 cut(s) | 124, 473 |
| PspN4I | GGNNCC | 1 cut(s) | 359 |
| PspPI | GGNCC | 3 cut(s) | 177, 358, 471 |
| PspPPI | RGGWCCY | 1 cut(s) | 358 |
| RsaI | GTAC | 2 cut(s) | 119, 454 |
| RsaNI | GTAC | 2 cut(s) | 118, 453 |
| SaqAI | TTAA | 5 cut(s) | 36, 347, 414, 501, 627 |
| Sau3AI | GATC | 3 cut(s) | 204, 215, 379 |
| Sau96I | GGNCC | 3 cut(s) | 177, 358, 471 |
| SchI | GAGTC | 1 cut(s) | 601 |
| ScrFI | CCNGG | 2 cut(s) | 126, 475 |
| SduI | GDGCHC | 1 cut(s) | 159 |
| SetI | ASST | 6 cut(s) | 71, 85, 105, 119, 310, 363 |
| SfaNI | GCATC | 1 cut(s) | 400 |
| SinI | GGWCC | 2 cut(s) | 177, 358 |
| Sse9I | AATT | 2 cut(s) | 22, 265 |
| SspMI | CTAG | 2 cut(s) | 185, 309 |
| StyD4I | CCNGG | 2 cut(s) | 124, 473 |
| StyI | CCWWGG | 1 cut(s) | 301 |
| TaaI | ACNGT | 2 cut(s) | 60, 325 |
| TaqI | TCGA | 2 cut(s) | 351, 532 |
| TasI | AATT | 2 cut(s) | 22, 265 |
| TfiI | GAWTC | 4 cut(s) | 15, 366, 421, 611 |
| Tru1I | TTAA | 5 cut(s) | 36, 347, 414, 501, 627 |
| Tru9I | TTAA | 5 cut(s) | 36, 347, 414, 501, 627 |
| TscAI | CASTG | 1 cut(s) | 65 |
| TspDTI | ATGAA | 1 cut(s) | 224 |
| TspRI | CASTG | 1 cut(s) | 65 |
| VpaK11BI | GGWCC | 2 cut(s) | 177, 358 |
| XapI | RAATTY | 1 cut(s) | 22 |
| XspI | CTAG | 2 cut(s) | 185, 309 |