FvH4_5g27367

Ribonuclease H protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
OG0000194
Physical Location & Seq
Forward (+)
18663914 .. 18665752
1839 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_5g27367.t1

Sequence Viewer

Length: 1233 bp
ATGGCTGGGAAGGAGACTATGATCAAATCTATTGCATTGGCGATTTCTACTTATCCTATGAGCTGTTTTAAACTTCCCCTCAGCACTTGTAAGGAAATTACCTCTCTTCTTAGCAACTTTTGGTGGGGTACTGGTCAAAATGGTAACAAGGTTCACTGTAAGAGTTGGGATTTATTGGGCACCCCTAAAGCTGATGGTGGCATGGGATTTAGGGAAATCCATCATTTTAACCTTGCACTTCTTGCAAAGCAGTGTTGGAGGCTCATACAAAATCCTAATTGCTTATGGGCAAAATTTTTGAAAGGCCGCTATTTTCCTAAGTGCAGTTTTATGGAGGCACAGAAAGGATATCGTGCCTCTTGGTGTTGGTCTAGTTTGATCGAAGCAAGAGACTGCTTCATGGGTGAAGGCTTTTGGCAAGACAAGTGGTTGCCCCATCTTTTTGCTGCTAAGGTGAGGGTAATTAGTGATATTCCATCAAATGGTCCTAGCTTTATGGGCTCTTTAATTGACTGGGATTTGAGGAGGTGGAATACCAATGCTATTGACCGAGTCATTCATCCACAAGACATACTGAGAATTGCTTCTATTCCTATTGGGGATGGAGAGGATAATGATCGTTTCTTGTGGCCTTGGAATAAGACCGGTCATAAAGAGGTGTCTCCGTCCTCAACTATCAGAGCTGCCCGAAATCTTGCTTTGGATTTCCTTAATGCCTCTGCATCTTTGGGGAAAAAGCGGGTTCCCAATCAGCTCTCACAGTGGATTCCTCCTCTAATTGGTCATCACAAGATCAACTATGACGCCTCTTGGTTCCCTCCGGATCAGACTGGGATTGGGATTGTGATAAGGGACTCGAGTCGGGTCATGGTTGCAGGTTCCAGTCGTTTGGTGAATTGTGGATCAGTTACTGAAGCTGAGGCTTCTGCTATTCTTGCCGGGACCGATATGGCTGCCTCCCTGCAATTACATAACGTCATCTTCGAATCAGACTCGGAAGAATTTGGATACCTTGAGAAGCGAATCGAGTGGCGCATATCGCCGCTTCGCTTGCCTTCGGAATGGTGGATCCTCTGCGATGGGCTTCTCAGCCACCACCTTCCCTCACTAATGTCCTTCGCAATGATGGATTGCCTTGCCCTCATGTTGAAGGGAGATGAGCTCGGCTGGTCTGGTCGTTGCTCTGTTTTTGTTGGCAAGAAAACTATCAGTTTCTACTTTTGTTTGATTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

411

Amino Acids

46.26

Weight (kDa)

8.63

Isoelectric Point (pI)

41.3

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RVT_3 PF13456 266 - 334 9.5e-11 Reverse transcriptase-like
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000194)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G34320 AT4G29090 AT5G42965
fragaria_vesca FvH4_1g19471 FvH4_1g29471 FvH4_1g29601 FvH4_2g04611 FvH4_2g05763 FvH4_2g11451 FvH4_2g11841 FvH4_3g10391 FvH4_3g21491 FvH4_3g21492 FvH4_3g32111 FvH4_3g35051 FvH4_4g06793 FvH4_5g08844 FvH4_5g15942 FvH4_5g18751 FvH4_5g27367 FvH4_6g11612 FvH4_6g20242 FvH4_6g27671 FvH4_6g31921 FvH4_7g32463
malus_domestica MD06G1107000.v1.1 MD07G1135800.v1.1 MD08G1205700.v1.1
prunus_persica Prupe.1G202000_v2.0.a1 Prupe.2G049100_v2.0.a1 Prupe.2G060500_v2.0.a1 Prupe.3G120300_v2.0.a1 Prupe.3G135000_v2.0.a1 Prupe.6G087800_v2.0.a1 Prupe.6G158500_v2.0.a1 Prupe.6G353900_v2.0.a1 Prupe.7G008600_v2.0.a1 Prupe.8G090500_v2.0.a1
pyrus_communis pycom01g21690 pycom02g19910 pycom04g18080 pycom07g08600 pycom07g18710 pycom07g26560 pycom08g03130 pycom08g13950 pycom09g06380 pycom10g13390 pycom10g22280 pycom11g04440 pycom11g10940 pycom12g04710 pycom13g08790 pycom15g31740 pycom17g14740 pycom17g24980
rosa_chinensis RchiOBHm_Chr1g0327801 RchiOBHm_Chr1g0347181 RchiOBHm_Chr1g0348821 RchiOBHm_Chr2g0157831 RchiOBHm_Chr5g0040851 RchiOBHm_Chr6g0249781 RchiOBHm_Chr7g0208461 RchiOBHm_Chr7g0210911 RchiOBHm_Chr7g0219141
rosa_laevigata RLG00000034326
rosa_multiflora Rmu_co8140276.1_g000001 Rmu_co8282095.1_g000001 Rmu_co8303311.1_g000001 Rmu_co8314215.1_g000001 Rmu_co8345435.1_g000001 Rmu_co8461745.1_g000001 Rmu_sc0000315.1_g000040 Rmu_sc0000487.1_g000014 Rmu_sc0000690.1_g000002 Rmu_sc0000808.1_g000001 Rmu_sc0000938.1_g000009 Rmu_sc0001260.1_g000002 Rmu_sc0001534.1_g000008 Rmu_sc0001669.1_g000003 Rmu_sc0001685.1_g000050 Rmu_sc0001838.1_g000007 Rmu_sc0002193.1_g000025 Rmu_sc0002308.1_g000058 Rmu_sc0002322.1_g000018 Rmu_sc0002529.1_g000008 Rmu_sc0002531.1_g000043 Rmu_sc0002754.1_g000022 Rmu_sc0002902.1_g000055 Rmu_sc0003627.1_g000005 Rmu_sc0003743.1_g000003 Rmu_sc0003765.1_g000016 Rmu_sc0003941.1_g000020 Rmu_sc0004038.1_g000011 Rmu_sc0004329.1_g000010 Rmu_sc0004476.1_g000002 Rmu_sc0004904.1_g000022 Rmu_sc0004988.1_g000017 Rmu_sc0005217.1_g000006 Rmu_sc0005257.1_g000010 Rmu_sc0005285.1_g000008 Rmu_sc0005687.1_g000001 Rmu_sc0006380.1_g000020 Rmu_sc0006922.1_g000004 Rmu_sc0007398.1_g000007 Rmu_sc0008279.1_g000019 Rmu_sc0009139.1_g000004 Rmu_sc0009158.1_g000001 Rmu_sc0010099.1_g000002 Rmu_sc0019043.1_g000001 Rmu_sc0022037.1_g000001 Rmu_sc0023291.1_g000001 Rmu_sc0031928.1_g000001 Rmu_sc0034436.1_g000002 Rmu_ssc0000126.1_g000001 Rmu_ssc0000151.1_g000016 Rmu_ssc0000152.1_g000009 Rmu_ssc0000395.1_g000031
rosa_roxburghii Rroxscaffold_1G00056570 Rroxscaffold_1G00058460 Rroxscaffold_2G00106120 Rroxscaffold_2G00106260 Rroxscaffold_6G00399080
rosa_rugosa Rorug02G0173300 Rorug02G0225600 Rorug03G0083300 Rorug03G0104900 Rorug04G0256500 Rorug05G0342600 Rorug06G0006200 Rorug06G0095200 Rorug06G0095600 Rorug06G0111500 Rorug07G0001200 Rorug07G0183100 Rorug07G0183100 Rorug07G0209000
rosa_samantha Rh2DG065400 Rh3DG315900 Rh4AG106100 Rh4BG362100 Rh4CG030200 Rh4DG239000 Rh4DG294000 Rh6DG304800 Rh7DG149500
rosa_wichuraiana Rw1G018070 Rw1G021220 Rw1G021820 Rw1G026430 Rw2G050800 Rw3G023330 Rw6G010050 Rw6G010440 Rw7G031930 Rw7G033860

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 866
AccB1I GGYRCC 1 cut(s) 179
AccB7I CCANNNNNTGG 1 cut(s) 482
AccIII TCCGGA 1 cut(s) 820
AciI CCGC 3 cut(s) 307, 739, 1043
AclWI GGATC 4 cut(s) 831, 910, 1063, 1076
AcsI RAATTY 2 cut(s) 293, 1001
AcuI CTGAAG 1 cut(s) 933
AcyI GRCGYC 1 cut(s) 804
AfaI GTAC 1 cut(s) 130
AfiI CCNNNNNNNGG 2 cut(s) 482, 779
AgeI ACCGGT 1 cut(s) 644
AgsI TTSAA 2 cut(s) 301, 1150
AluBI AGCT 7 cut(s) 63, 191, 492, 683, 754, 917, 1162
AluI AGCT 7 cut(s) 63, 191, 492, 683, 754, 917, 1162
Alw21I GWGCWC 1 cut(s) 1164
Alw26I GTCTC 3 cut(s) 8, 384, 666
AlwI GGATC 4 cut(s) 831, 910, 1063, 1076
AlwNI CAGNNNCTG 1 cut(s) 911
Ama87I CYCGRG 1 cut(s) 856
Aor13HI TCCGGA 1 cut(s) 820
AoxI GGCC 2 cut(s) 304, 629
ApeKI GCWGC 3 cut(s) 446, 683, 953
ApoI RAATTY 2 cut(s) 293, 1001
AsiGI ACCGGT 1 cut(s) 644
Asp700I GAANNNNTTC 1 cut(s) 583
AspLEI GCGC 1 cut(s) 1035
AspS9I GGNCC 2 cut(s) 485, 942
AsuC2I CCSGG 1 cut(s) 940
AsuHPI GGTGA 3 cut(s) 416, 466, 904
AsuII TTCGAA 1 cut(s) 984
AvaI CYCGRG 1 cut(s) 856
AvaII GGWCC 2 cut(s) 485, 942
BaeGI GKGCMC 1 cut(s) 182
BamHI GGATCC 1 cut(s) 1068
BanI GGYRCC 1 cut(s) 179
BanII GRGCYC 2 cut(s) 503, 1164
Bbv12I GWGCWC 1 cut(s) 1164
BbvCI CCTCAGC 2 cut(s) 80, 918
BbvI GCAGC 3 cut(s) 433, 670, 940
BccI CCATC 7 cut(s) 188, 228, 444, 484, 596, 1073, 1120
BcgI CGANNNNNNTGC 2 cut(s) 935, 969
BciVI GTATCC 1 cut(s) 1001
BclI TGATCA 1 cut(s) 21
BcnI CCSGG 1 cut(s) 940
BcoDI GTCTC 3 cut(s) 8, 384, 666
BfaI CTAG 2 cut(s) 372, 489
BfuAI ACCTGC 1 cut(s) 866
BfuI GTATCC 1 cut(s) 1001
BisI GCNGC 5 cut(s) 307, 447, 684, 954, 1043
BlsI GCNGC 5 cut(s) 308, 448, 685, 955, 1044
Bme1390I CCNGG 1 cut(s) 940
Bme18I GGWCC 2 cut(s) 485, 942
BmeT110I CYCGRG 1 cut(s) 856
BmgT120I GGNCC 2 cut(s) 485, 942
BmiI GGNNCC 6 cut(s) 181, 744, 815, 880, 943, 1070
BmrFI CCNGG 1 cut(s) 940
BmrI ACTGGG 2 cut(s) 523, 840
BmsI GCATC 1 cut(s) 731
BmuI ACTGGG 2 cut(s) 523, 840
BoxI GACNNNNGTC 1 cut(s) 858
BplI GAGNNNNNCTC 2 cut(s) 1146, 1178
Bpu10I CCTNAGC 3 cut(s) 80, 450, 918
Bpu14I TTCGAA 1 cut(s) 984
BpuEI CTTGAG 1 cut(s) 1034
BpuMI CCSGG 1 cut(s) 940
BsaBI GATNNNNATC 1 cut(s) 615
BsaHI GRCGYC 1 cut(s) 804
BsaJI CCNNGG 1 cut(s) 632
BsaWI WCCGGW 2 cut(s) 644, 820
Bsc4I CCNNNNNNNGG 2 cut(s) 482, 779
Bse118I RCCGGY 1 cut(s) 644
Bse1I ACTGG 4 cut(s) 136, 518, 835, 882
Bse3DI GCAATG 1 cut(s) 1128
Bse8I GATNNNNATC 1 cut(s) 615
BseAI TCCGGA 1 cut(s) 820
BseDI CCNNGG 1 cut(s) 632
BseGI GGATG 2 cut(s) 559, 607
BseJI GATNNNNATC 1 cut(s) 615
BseLI CCNNNNNNNGG 2 cut(s) 482, 779
BseMI GCAATG 1 cut(s) 1128
BseMII CTCAG 4 cut(s) 94, 566, 909, 1102
BseNI ACTGG 4 cut(s) 136, 518, 835, 882
BseRI GAGGAG 2 cut(s) 538, 762
BseSI GKGCMC 1 cut(s) 182
BseXI GCAGC 3 cut(s) 433, 670, 940
BseYI CCCAGC 1 cut(s) 5
BsgI GTGCAG 1 cut(s) 343
BshFI GGCC 2 cut(s) 306, 631
BshNI GGYRCC 1 cut(s) 179
BshTI ACCGGT 1 cut(s) 644
BsiHKAI GWGCWC 1 cut(s) 1164
BsiHKCI CYCGRG 1 cut(s) 856
BsiSI CCGG 3 cut(s) 645, 821, 939
BslFI GGGAC 2 cut(s) 866, 955
BslI CCNNNNNNNGG 2 cut(s) 482, 779
BsmAI GTCTC 3 cut(s) 8, 384, 666
BsmFI GGGAC 2 cut(s) 866, 955
BsnI GGCC 2 cut(s) 306, 631
BsoBI CYCGRG 1 cut(s) 856
Bsp119I TTCGAA 1 cut(s) 984
Bsp1286I GDGCHC 3 cut(s) 182, 503, 1164
Bsp13I TCCGGA 1 cut(s) 820
Bsp143I GATC 7 cut(s) 21, 378, 616, 792, 823, 902, 1068
BspACI CCGC 3 cut(s) 307, 739, 1043
BspANI GGCC 2 cut(s) 306, 631
BspCNI CTCAG 4 cut(s) 93, 567, 910, 1101
BspEI TCCGGA 1 cut(s) 820
BspLI GGNNCC 6 cut(s) 181, 744, 815, 880, 943, 1070
BspMI ACCTGC 1 cut(s) 866
BspPI GGATC 4 cut(s) 831, 910, 1063, 1076
BspT104I TTCGAA 1 cut(s) 984
BspT107I GGYRCC 1 cut(s) 179
BsrDI GCAATG 1 cut(s) 1128
BsrFI RCCGGY 1 cut(s) 644
BsrI ACTGG 4 cut(s) 136, 518, 835, 882
BssAI RCCGGY 1 cut(s) 644
BssECI CCNNGG 1 cut(s) 632
BssMI GATC 7 cut(s) 21, 378, 616, 792, 823, 902, 1068
BssNI GRCGYC 1 cut(s) 804
BssT1I CCWWGG 1 cut(s) 632
Bst4CI ACNGT 2 cut(s) 158, 762
Bst6I CTCTTC 1 cut(s) 111
BstACI GRCGYC 1 cut(s) 804
BstAPI GCANNNNNTGC 1 cut(s) 242
BstBI TTCGAA 1 cut(s) 984
BstC8I GCNNGC 1 cut(s) 1052
BstDEI CTNAG 7 cut(s) 80, 110, 318, 450, 575, 918, 1088
BstF5I GGATG 2 cut(s) 559, 607
BstHHI GCGC 1 cut(s) 1035
BstKTI GATC 7 cut(s) 24, 381, 619, 795, 826, 905, 1071
BstMAI GTCTC 3 cut(s) 8, 384, 666
BstMBI GATC 7 cut(s) 21, 378, 616, 792, 823, 902, 1068
BstMWI GCNNNNNNNGC 5 cut(s) 242, 498, 935, 1039, 1051
BstPAI GACNNNNGTC 1 cut(s) 858
BstSCI CCNGG 1 cut(s) 938
BstSLI GKGCMC 1 cut(s) 182
BstV1I GCAGC 3 cut(s) 433, 670, 940
BstX2I RGATCY 1 cut(s) 1068
BstXI CCANNNNNNTGG 1 cut(s) 889
BstYI RGATCY 1 cut(s) 1068
BsuI GTATCC 1 cut(s) 1001
BsuRI GGCC 2 cut(s) 306, 631
BtgZI GCGATG 1 cut(s) 1092
BtsCI GGATG 2 cut(s) 559, 607
BtsI GCAGTG 1 cut(s) 257
BtsIMutI CAGTG 3 cut(s) 154, 257, 767
BveI ACCTGC 1 cut(s) 866
Cac8I GCNNGC 1 cut(s) 1052
CaiI CAGNNNCTG 1 cut(s) 911
CfoI GCGC 1 cut(s) 1035
Cfr10I RCCGGY 1 cut(s) 644
Cfr13I GGNCC 2 cut(s) 485, 942
CseI GACGC 1 cut(s) 812
Csp6I GTAC 1 cut(s) 129
CspAI ACCGGT 1 cut(s) 644
CspCI CAANNNNNGTGG 2 cut(s) 407, 442
CviAII CATG 4 cut(s) 202, 400, 868, 1144
CviQI GTAC 1 cut(s) 129
DdeI CTNAG 7 cut(s) 80, 110, 318, 450, 575, 918, 1088
DpnI GATC 7 cut(s) 23, 380, 618, 794, 825, 904, 1070
DpnII GATC 7 cut(s) 21, 378, 616, 792, 823, 902, 1068
DraI TTTAAA 1 cut(s) 70
Eam1104I CTCTTC 1 cut(s) 111
EarI CTCTTC 1 cut(s) 111
Ecl136II GAGCTC 1 cut(s) 1162
Eco130I CCWWGG 1 cut(s) 632
Eco24I GRGCYC 2 cut(s) 503, 1164
Eco32I GATATC 1 cut(s) 350
Eco47I GGWCC 2 cut(s) 485, 942
Eco53kI GAGCTC 1 cut(s) 1162
Eco57I CTGAAG 1 cut(s) 933
Eco88I CYCGRG 1 cut(s) 856
EcoICRI GAGCTC 1 cut(s) 1162
EcoRV GATATC 1 cut(s) 350
EcoT14I CCWWGG 1 cut(s) 632
EcoT38I GRGCYC 2 cut(s) 503, 1164
ErhI CCWWGG 1 cut(s) 632
FaeI CATG 4 cut(s) 205, 403, 871, 1147
FaqI GGGAC 2 cut(s) 866, 955
FatI CATG 4 cut(s) 201, 399, 867, 1143
FauI CCCGC 1 cut(s) 732
FbaI TGATCA 1 cut(s) 21
Fnu4HI GCNGC 5 cut(s) 307, 447, 684, 954, 1043
FokI GGATG 2 cut(s) 546, 614
FriOI GRGCYC 2 cut(s) 503, 1164
Fsp4HI GCNGC 5 cut(s) 307, 447, 684, 954, 1043
FspBI CTAG 2 cut(s) 372, 489
GlaI GCGC 1 cut(s) 1034
GluI GCNGC 5 cut(s) 307, 447, 684, 954, 1043
GsaI CCCAGC 1 cut(s) 9
HaeIII GGCC 2 cut(s) 306, 631
HapII CCGG 3 cut(s) 645, 821, 939
HgaI GACGC 1 cut(s) 812
HhaI GCGC 1 cut(s) 1035
Hin1I GRCGYC 1 cut(s) 804
Hin1II CATG 4 cut(s) 205, 403, 871, 1147
Hin6I GCGC 1 cut(s) 1033
HinP1I GCGC 1 cut(s) 1033
HinfI GANTC 7 cut(s) 552, 766, 854, 859, 986, 992, 1023
HpaII CCGG 3 cut(s) 645, 821, 939
HphI GGTGA 3 cut(s) 416, 466, 904
Hpy166II GTNNAC 1 cut(s) 154
Hpy188I TCNGA 5 cut(s) 680, 828, 991, 997, 1060
Hpy188III TCNNGA 1 cut(s) 821
Hpy8I GTNNAC 1 cut(s) 154
HpyAV CCTTC 6 cut(s) 4, 401, 1065, 1109, 1126, 1144
HpyCH4III ACNGT 2 cut(s) 158, 762
HpyCH4IV ACGT 1 cut(s) 975
HpyCH4V TGCA 7 cut(s) 35, 236, 245, 324, 722, 875, 964
HpyF10VI GCNNNNNNNGC 5 cut(s) 242, 498, 935, 1039, 1051
HpyF3I CTNAG 7 cut(s) 80, 110, 318, 450, 575, 918, 1088
HpySE526I ACGT 1 cut(s) 975
Hsp92I GRCGYC 1 cut(s) 804
Hsp92II CATG 4 cut(s) 205, 403, 871, 1147
HspAI GCGC 1 cut(s) 1033
Kpn2I TCCGGA 1 cut(s) 820
Ksp22I TGATCA 1 cut(s) 21
Kzo9I GATC 7 cut(s) 21, 378, 616, 792, 823, 902, 1068
Lsp1109I GCAGC 3 cut(s) 433, 670, 940
LweI GCATC 1 cut(s) 731
MaeI CTAG 2 cut(s) 372, 489
MaeII ACGT 1 cut(s) 975
MaeIII GTNAC 2 cut(s) 143, 907
MalI GATC 7 cut(s) 23, 380, 618, 794, 825, 904, 1070
MboI GATC 7 cut(s) 21, 378, 616, 792, 823, 902, 1068
MboII GAAGA 3 cut(s) 98, 973, 1010
MflI RGATCY 1 cut(s) 1068
MhlI GDGCHC 3 cut(s) 182, 503, 1164
MlyI GAGTC 4 cut(s) 561, 848, 868, 986
MmeI TCCRAC 1 cut(s) 236
MroI TCCGGA 1 cut(s) 820
MroXI GAANNNNTTC 1 cut(s) 583
MseI TTAA 4 cut(s) 69, 228, 506, 711
MspI CCGG 3 cut(s) 645, 821, 939
MspR9I CCNGG 1 cut(s) 940
MwoI GCNNNNNNNGC 5 cut(s) 242, 498, 935, 1039, 1051
NciI CCSGG 1 cut(s) 940
NdeII GATC 7 cut(s) 21, 378, 616, 792, 823, 902, 1068
NlaIII CATG 4 cut(s) 205, 403, 871, 1147
NlaIV GGNNCC 6 cut(s) 181, 744, 815, 880, 943, 1070
NmeAIII GCCGAG 1 cut(s) 1143
NspV TTCGAA 1 cut(s) 984
PaeR7I CTCGAG 1 cut(s) 856
PcsI WCGNNNNNNNCGW 1 cut(s) 981
PdmI GAANNNNTTC 1 cut(s) 583
PfeI GAWTC 3 cut(s) 766, 986, 1023
PflFI GACNNNGTC 1 cut(s) 551
PflMI CCANNNNNTGG 1 cut(s) 482
PinAI ACCGGT 1 cut(s) 644
PkrI GCNGC 5 cut(s) 308, 448, 685, 955, 1044
PleI GAGTC 4 cut(s) 560, 848, 867, 986
PpsI GAGTC 4 cut(s) 560, 848, 867, 986
PshAI GACNNNNGTC 1 cut(s) 858
Psp124BI GAGCTC 1 cut(s) 1164
PspFI CCCAGC 1 cut(s) 5
PspN4I GGNNCC 6 cut(s) 181, 744, 815, 880, 943, 1070
PspPI GGNCC 2 cut(s) 485, 942
PspXI VCTCGAGB 1 cut(s) 856
PstNI CAGNNNCTG 1 cut(s) 911
PsuI RGATCY 1 cut(s) 1068
PsyI GACNNNGTC 1 cut(s) 551
RsaI GTAC 1 cut(s) 130
RsaNI GTAC 1 cut(s) 129
SacI GAGCTC 1 cut(s) 1164
SaqAI TTAA 4 cut(s) 69, 228, 506, 711
SatI GCNGC 5 cut(s) 307, 447, 684, 954, 1043
Sau3AI GATC 7 cut(s) 21, 378, 616, 792, 823, 902, 1068
Sau96I GGNCC 2 cut(s) 485, 942
SchI GAGTC 4 cut(s) 561, 848, 868, 986
ScrFI CCNGG 1 cut(s) 940
SduI GDGCHC 3 cut(s) 182, 503, 1164
SfaNI GCATC 1 cut(s) 731
Sfr274I CTCGAG 1 cut(s) 856
SfuI TTCGAA 1 cut(s) 984
SinI GGWCC 2 cut(s) 485, 942
SlaI CTCGAG 1 cut(s) 856
SmlI CTYRAG 2 cut(s) 856, 1013
SmoI CTYRAG 2 cut(s) 856, 1013
SsiI CCGC 3 cut(s) 307, 739, 1043
SspMI CTAG 2 cut(s) 372, 489
SstI GAGCTC 1 cut(s) 1164
StyD4I CCNGG 1 cut(s) 938
StyI CCWWGG 1 cut(s) 632
TaaI ACNGT 2 cut(s) 158, 762
TaiI ACGT 1 cut(s) 978
TaqI TCGA 4 cut(s) 381, 857, 984, 1026
TaqII GACCGA 2 cut(s) 564, 959
TauI GCSGC 2 cut(s) 309, 1045
TfiI GAWTC 3 cut(s) 766, 986, 1023
Tru1I TTAA 4 cut(s) 69, 228, 506, 711
Tru9I TTAA 4 cut(s) 69, 228, 506, 711
TscAI CASTG 3 cut(s) 161, 257, 767
TseI GCWGC 3 cut(s) 446, 683, 953
TspDTI ATGAA 2 cut(s) 388, 548
TspGWI ACGGA 1 cut(s) 654
TspRI CASTG 3 cut(s) 161, 257, 767
Tth111I GACNNNGTC 1 cut(s) 551
Van91I CCANNNNNTGG 1 cut(s) 482
VpaK11BI GGWCC 2 cut(s) 485, 942
XapI RAATTY 2 cut(s) 293, 1001
XhoI CTCGAG 1 cut(s) 856
XmnI GAANNNNTTC 1 cut(s) 583
XspI CTAG 2 cut(s) 372, 489
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.